Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84206.t1 | XP_003623296.1 | 96 | 426 | 17 | 0 | 3 | 428 | 66 | 491 | 1.40E-236 | 828.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84206.t1 | B6IDH3 | 64.0 | 425 | 145 | 2 | 8 | 424 | 79 | 503 | 8.6e-155 | 548.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84206.t1 | G7KS93 | 96.0 | 426 | 17 | 0 | 3 | 428 | 66 | 491 | 9.9e-237 | 828.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene84206 | 0.811207 | 7.86E-51 | -1.69E-46 |
| MS.gene049351 | MS.gene84206 | 0.818937 | 1.51E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene84206 | 0.800351 | 1.50E-48 | -1.69E-46 |
| MS.gene049609 | MS.gene84206 | 0.816331 | 5.84E-52 | -1.69E-46 |
| MS.gene049805 | MS.gene84206 | 0.812676 | 3.76E-51 | -1.69E-46 |
| MS.gene050593 | MS.gene84206 | 0.871374 | 7.17E-67 | -1.69E-46 |
| MS.gene050670 | MS.gene84206 | 0.863969 | 1.70E-64 | -1.69E-46 |
| MS.gene050747 | MS.gene84206 | 0.806162 | 9.41E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene84206 | 0.8096 | 1.75E-50 | -1.69E-46 |
| MS.gene05105 | MS.gene84206 | 0.821013 | 5.06E-53 | -1.69E-46 |
| MS.gene051255 | MS.gene84206 | 0.800262 | 1.57E-48 | -1.69E-46 |
| MS.gene051387 | MS.gene84206 | 0.863684 | 2.09E-64 | -1.69E-46 |
| MS.gene051525 | MS.gene84206 | 0.825916 | 3.61E-54 | -1.69E-46 |
| MS.gene051582 | MS.gene84206 | 0.800385 | 1.48E-48 | -1.69E-46 |
| MS.gene051666 | MS.gene84206 | 0.827661 | 1.38E-54 | -1.69E-46 |
| MS.gene051694 | MS.gene84206 | 0.836673 | 8.15E-57 | -1.69E-46 |
| MS.gene051858 | MS.gene84206 | 0.824968 | 6.05E-54 | -1.69E-46 |
| MS.gene051877 | MS.gene84206 | 0.845145 | 4.88E-59 | -1.69E-46 |
| MS.gene052188 | MS.gene84206 | 0.806545 | 7.81E-50 | -1.69E-46 |
| MS.gene052310 | MS.gene84206 | 0.814942 | 1.19E-51 | -1.69E-46 |
| MS.gene052322 | MS.gene84206 | 0.801908 | 7.21E-49 | -1.69E-46 |
| MS.gene052421 | MS.gene84206 | 0.802759 | 4.82E-49 | -1.69E-46 |
| MS.gene052481 | MS.gene84206 | 0.843613 | 1.26E-58 | -1.69E-46 |
| MS.gene052484 | MS.gene84206 | 0.852379 | 4.80E-61 | -1.69E-46 |
| MS.gene052485 | MS.gene84206 | 0.830039 | 3.68E-55 | -1.69E-46 |
| MS.gene052501 | MS.gene84206 | 0.815793 | 7.71E-52 | -1.69E-46 |
| MS.gene052505 | MS.gene84206 | 0.812561 | 3.98E-51 | -1.69E-46 |
| MS.gene052982 | MS.gene84206 | 0.824164 | 9.36E-54 | -1.69E-46 |
| MS.gene053104 | MS.gene84206 | 0.816295 | 5.95E-52 | -1.69E-46 |
| MS.gene053107 | MS.gene84206 | 0.835859 | 1.31E-56 | -1.69E-46 |
| MS.gene053207 | MS.gene84206 | 0.800876 | 1.17E-48 | -1.69E-46 |
| MS.gene053322 | MS.gene84206 | 0.807131 | 5.87E-50 | -1.69E-46 |
| MS.gene053449 | MS.gene84206 | 0.802041 | 6.77E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene84206 | 0.804425 | 2.17E-49 | -1.69E-46 |
| MS.gene054955 | MS.gene84206 | 0.800142 | 1.66E-48 | -1.69E-46 |
| MS.gene05505 | MS.gene84206 | 0.801862 | 7.37E-49 | -1.69E-46 |
| MS.gene055206 | MS.gene84206 | 0.827551 | 1.47E-54 | -1.69E-46 |
| MS.gene055224 | MS.gene84206 | 0.807254 | 5.53E-50 | -1.69E-46 |
| MS.gene055277 | MS.gene84206 | 0.806689 | 7.28E-50 | -1.69E-46 |
| MS.gene055289 | MS.gene84206 | 0.802858 | 4.60E-49 | -1.69E-46 |
| MS.gene055577 | MS.gene84206 | 0.804815 | 1.80E-49 | -1.69E-46 |
| MS.gene055722 | MS.gene84206 | 0.805207 | 1.49E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene84206 | 0.810358 | 1.20E-50 | -1.69E-46 |
| MS.gene055941 | MS.gene84206 | 0.826159 | 3.16E-54 | -1.69E-46 |
| MS.gene056407 | MS.gene84206 | 0.839277 | 1.74E-57 | -1.69E-46 |
| MS.gene056410 | MS.gene84206 | 0.838687 | 2.48E-57 | -1.69E-46 |
| MS.gene056452 | MS.gene84206 | 0.808543 | 2.94E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene84206 | 0.82394 | 1.06E-53 | -1.69E-46 |
| MS.gene056796 | MS.gene84206 | 0.84727 | 1.29E-59 | -1.69E-46 |
| MS.gene057011 | MS.gene84206 | 0.832294 | 1.03E-55 | -1.69E-46 |
| MS.gene057146 | MS.gene84206 | 0.842033 | 3.31E-58 | -1.69E-46 |
| MS.gene057331 | MS.gene84206 | 0.815834 | 7.54E-52 | -1.69E-46 |
| MS.gene057416 | MS.gene84206 | 0.828416 | 9.10E-55 | -1.69E-46 |
| MS.gene057823 | MS.gene84206 | 0.803928 | 2.76E-49 | -1.69E-46 |
| MS.gene057856 | MS.gene84206 | 0.819332 | 1.23E-52 | -1.69E-46 |
| MS.gene057926 | MS.gene84206 | 0.803704 | 3.07E-49 | -1.69E-46 |
| MS.gene058006 | MS.gene84206 | 0.809532 | 1.81E-50 | -1.69E-46 |
| MS.gene058019 | MS.gene84206 | 0.832756 | 7.88E-56 | -1.69E-46 |
| MS.gene05811 | MS.gene84206 | 0.826184 | 3.12E-54 | -1.69E-46 |
| MS.gene058293 | MS.gene84206 | 0.823065 | 1.69E-53 | -1.69E-46 |
| MS.gene058323 | MS.gene84206 | 0.821138 | 4.74E-53 | -1.69E-46 |
| MS.gene058444 | MS.gene84206 | 0.820244 | 7.60E-53 | -1.69E-46 |
| MS.gene058660 | MS.gene84206 | 0.830285 | 3.20E-55 | -1.69E-46 |
| MS.gene058700 | MS.gene84206 | 0.840196 | 1.01E-57 | -1.69E-46 |
| MS.gene05883 | MS.gene84206 | 0.803764 | 2.98E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene84206 | 0.832334 | 1.00E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene84206 | 0.825992 | 3.46E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene84206 | 0.841726 | 3.99E-58 | -1.69E-46 |
| MS.gene059676 | MS.gene84206 | 0.848719 | 5.12E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene84206 | 0.820158 | 7.95E-53 | -1.69E-46 |
| MS.gene059692 | MS.gene84206 | 0.80529 | 1.43E-49 | -1.69E-46 |
| MS.gene059695 | MS.gene84206 | 0.80952 | 1.82E-50 | -1.69E-46 |
| MS.gene059902 | MS.gene84206 | 0.828771 | 7.47E-55 | -1.69E-46 |
| MS.gene059960 | MS.gene84206 | 0.820536 | 6.51E-53 | -1.69E-46 |
| MS.gene060193 | MS.gene84206 | 0.848069 | 7.75E-60 | -1.69E-46 |
| MS.gene060403 | MS.gene84206 | 0.837977 | 3.78E-57 | -1.69E-46 |
| MS.gene060804 | MS.gene84206 | 0.83008 | 3.59E-55 | -1.69E-46 |
| MS.gene060835 | MS.gene84206 | 0.810813 | 9.56E-51 | -1.69E-46 |
| MS.gene060837 | MS.gene84206 | 0.842071 | 3.24E-58 | -1.69E-46 |
| MS.gene06092 | MS.gene84206 | 0.82432 | 8.60E-54 | -1.69E-46 |
| MS.gene061154 | MS.gene84206 | 0.821445 | 4.02E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene84206 | 0.827114 | 1.87E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84206.t1 | MTR_7g068310 | 96.009 | 426 | 17 | 0 | 3 | 428 | 66 | 491 | 0.0 | 833 |
| MS.gene84206.t1 | MTR_5g044720 | 27.604 | 384 | 248 | 10 | 43 | 413 | 384 | 750 | 1.43e-36 | 142 |
| MS.gene84206.t1 | MTR_5g025160 | 27.252 | 444 | 265 | 13 | 11 | 413 | 139 | 565 | 3.36e-34 | 134 |
| MS.gene84206.t1 | MTR_4g134590 | 27.366 | 391 | 257 | 8 | 30 | 408 | 99 | 474 | 5.08e-32 | 127 |
| MS.gene84206.t1 | MTR_4g077650 | 28.827 | 392 | 250 | 11 | 30 | 408 | 87 | 462 | 4.58e-31 | 124 |
| MS.gene84206.t1 | MTR_7g096920 | 24.641 | 418 | 275 | 10 | 3 | 413 | 21 | 405 | 1.11e-28 | 117 |
| MS.gene84206.t1 | MTR_7g058500 | 25.581 | 258 | 171 | 6 | 44 | 293 | 111 | 355 | 5.13e-19 | 89.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene84206.t1 | AT5G01510 | 64.815 | 432 | 143 | 3 | 2 | 424 | 72 | 503 | 0.0 | 525 |
| MS.gene84206.t1 | AT3G45890 | 28.338 | 367 | 228 | 8 | 32 | 374 | 182 | 537 | 5.43e-37 | 142 |
| MS.gene84206.t1 | AT5G49820 | 28.800 | 375 | 242 | 10 | 30 | 395 | 94 | 452 | 5.30e-30 | 122 |
| MS.gene84206.t1 | AT1G13770 | 24.021 | 383 | 264 | 9 | 43 | 413 | 52 | 419 | 5.50e-29 | 118 |
| MS.gene84206.t1 | AT1G13770 | 27.160 | 243 | 170 | 3 | 35 | 276 | 44 | 280 | 1.84e-27 | 111 |
| MS.gene84206.t1 | AT1G13770 | 27.660 | 235 | 163 | 3 | 43 | 276 | 52 | 280 | 4.50e-27 | 112 |
| MS.gene84206.t1 | AT2G31190 | 26.000 | 350 | 226 | 9 | 2 | 346 | 37 | 358 | 6.24e-26 | 109 |
| MS.gene84206.t1 | AT2G31190 | 26.000 | 350 | 226 | 9 | 2 | 346 | 38 | 359 | 6.31e-26 | 109 |
| MS.gene84206.t1 | AT1G13770 | 23.615 | 343 | 235 | 9 | 83 | 413 | 5 | 332 | 1.74e-22 | 98.6 |
| MS.gene84206.t1 | AT2G23470 | 30.660 | 212 | 139 | 3 | 1 | 211 | 75 | 279 | 7.02e-22 | 98.2 |
Find 94 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGAACCGAAAATTATTAT+TGG | 0.215950 | 7.3:-36894451 | None:intergenic |
| GCATACATTCTCCATTGTTT+TGG | 0.217722 | 7.3:-36892514 | None:intergenic |
| ATCATCAATTGAAATTTCTT+TGG | 0.219699 | 7.3:-36895283 | None:intergenic |
| CTTTGCAATTTCAGTAAATC+TGG | 0.249782 | 7.3:+36893331 | MS.gene84206:CDS |
| CTGCTTCTGCTGCTGCCATC+AGG | 0.250457 | 7.3:+36892177 | MS.gene84206:CDS |
| CAATTGGTTGGTCTTGGTTT+GGG | 0.254535 | 7.3:+36893850 | MS.gene84206:CDS |
| GAAAATATCCGGGATATAAC+TGG | 0.266273 | 7.3:-36892668 | None:intergenic |
| CATTCCATCCATCTTGTCTA+AGG | 0.292124 | 7.3:-36894473 | None:intergenic |
| TTAATGAACAGATACGTAAT+TGG | 0.296848 | 7.3:+36890869 | None:intergenic |
| GAAGCATATGGCAGACATTC+TGG | 0.299004 | 7.3:+36895118 | MS.gene84206:CDS |
| CATTCTGGCTTAGTGAGAAT+TGG | 0.301398 | 7.3:+36895133 | MS.gene84206:CDS |
| GGTCTCTGCAAAACAGGTTT+GGG | 0.302750 | 7.3:+36890933 | MS.gene84206:CDS |
| TCAATTGGTTGGTCTTGGTT+TGG | 0.303687 | 7.3:+36893849 | MS.gene84206:CDS |
| ATAAAATCTTTAATCCTATC+TGG | 0.305573 | 7.3:-36890992 | None:intergenic |
| GCCTAATGGAATTGGAAAAT+AGG | 0.325397 | 7.3:+36895193 | MS.gene84206:CDS |
| ATTCTACCTGCAGGCTTTCC+CGG | 0.336688 | 7.3:+36891013 | MS.gene84206:CDS |
| TAATATCTCAGGAAGAAGTT+TGG | 0.345220 | 7.3:+36893815 | MS.gene84206:intron |
| TTGTACGGCTTCTTCATCTT+TGG | 0.346675 | 7.3:+36894036 | MS.gene84206:CDS |
| TCATCAATTGAAATTTCTTT+GGG | 0.350605 | 7.3:-36895282 | None:intergenic |
| TGCCAGTAGCCTAATGGAAT+TGG | 0.355134 | 7.3:+36895185 | MS.gene84206:CDS |
| GTAGCTCAATTGGTTGGTCT+TGG | 0.361164 | 7.3:+36893844 | MS.gene84206:CDS |
| GCTGTCGGGCGCTTATTCAT+TGG | 0.371785 | 7.3:+36892372 | MS.gene84206:CDS |
| TTTCTTCCTTTGGCATCTCT+TGG | 0.375549 | 7.3:+36892687 | MS.gene84206:CDS |
| TGGTTTGGGCATATTGATAC+TGG | 0.380527 | 7.3:+36893864 | MS.gene84206:CDS |
| ACATGCTTACCGTGTTAAAC+TGG | 0.381456 | 7.3:-36894085 | None:intergenic |
| TTGGGAAGTTGTAGCTCAAT+TGG | 0.384419 | 7.3:+36893834 | MS.gene84206:CDS |
| GTTGGTGTAGGTTCTTTCTC+TGG | 0.384652 | 7.3:+36892143 | MS.gene84206:CDS |
| CAGTTCCCTACCAATGTAAC+TGG | 0.388825 | 7.3:+36891467 | MS.gene84206:CDS |
| TAGGAGACTTGAAGTGACTA+TGG | 0.397489 | 7.3:-36891504 | None:intergenic |
| CCCCTTCACTTGCAGGCTGT+TGG | 0.399709 | 7.3:+36892125 | MS.gene84206:intron |
| AATATCTCAGGAAGAAGTTT+GGG | 0.400898 | 7.3:+36893816 | MS.gene84206:intron |
| TGGAATTATTTCAGGATGCT+TGG | 0.402637 | 7.3:+36894381 | MS.gene84206:intron |
| GCAGACTTCATTGGCAGTGC+TGG | 0.407400 | 7.3:+36892535 | MS.gene84206:CDS |
| CATCAACTTGGTTGATTGTA+CGG | 0.407754 | 7.3:+36894021 | MS.gene84206:CDS |
| AGGTCTCTGCAAAACAGGTT+TGG | 0.411007 | 7.3:+36890932 | MS.gene84206:CDS |
| TTCCAATTCCATTAGGCTAC+TGG | 0.411161 | 7.3:-36895187 | None:intergenic |
| TACTCAACAATTAAATTTGA+AGG | 0.423130 | 7.3:+36895257 | MS.gene84206:CDS |
| TGCCAAAGGAAGAAAATATC+CGG | 0.429711 | 7.3:-36892679 | None:intergenic |
| TAGTGAGAATTGGGAGAGAA+AGG | 0.431792 | 7.3:+36895143 | MS.gene84206:CDS |
| AGGATAGGTCTCTGCAAAAC+AGG | 0.433677 | 7.3:+36890927 | MS.gene84206:CDS |
| ATTCTGGCTTAGTGAGAATT+GGG | 0.446216 | 7.3:+36895134 | MS.gene84206:CDS |
| AGCAGCAGAAGCAGCTGCTG+TGG | 0.459258 | 7.3:-36892168 | None:intergenic |
| TATTAAGCGTGCTCGCATAC+TGG | 0.460626 | 7.3:+36894253 | MS.gene84206:CDS |
| AAAAGTTGAAAGATGCTGAA+TGG | 0.461318 | 7.3:+36895232 | MS.gene84206:CDS |
| CGGTTCACCCTTAGACAAGA+TGG | 0.462228 | 7.3:+36894465 | MS.gene84206:CDS |
| AAAGTTGAAAGATGCTGAAT+GGG | 0.463223 | 7.3:+36895233 | MS.gene84206:CDS |
| CACTTGCAGGCTGTTGGTGT+AGG | 0.466951 | 7.3:+36892131 | MS.gene84206:intron |
| TCAACTTGCCAGTAGCCTAA+TGG | 0.467930 | 7.3:+36895179 | MS.gene84206:CDS |
| GACTATCCTGGCTTCCAGAT+AGG | 0.471080 | 7.3:+36890978 | MS.gene84206:CDS |
| CTGAATGTAACCTGGAACAG+TGG | 0.482339 | 7.3:-36894297 | None:intergenic |
| TCTCGGTATTGCGAAGCATA+TGG | 0.483109 | 7.3:+36895106 | MS.gene84206:CDS |
| TTTGCAATTTCAGTAAATCT+GGG | 0.495289 | 7.3:+36893332 | MS.gene84206:CDS |
| AGTGAGAATTGGGAGAGAAA+GGG | 0.498020 | 7.3:+36895144 | MS.gene84206:CDS |
| ATCTCTTGGAAATCTTACTA+AGG | 0.499636 | 7.3:+36892701 | MS.gene84206:CDS |
| TTTAATCCTATCTGGAAGCC+AGG | 0.499967 | 7.3:-36890984 | None:intergenic |
| CCATTCTAGTTGAGGAGGAT+AGG | 0.503587 | 7.3:+36890912 | MS.gene84206:CDS |
| CCTATCCTCCTCAACTAGAA+TGG | 0.506141 | 7.3:-36890912 | None:intergenic |
| TGGGTCTCAAAGGACGGCAT+TGG | 0.507950 | 7.3:+36892348 | MS.gene84206:CDS |
| ATCCATCCAGTTACATTGGT+AGG | 0.509746 | 7.3:-36891473 | None:intergenic |
| AGGACGGCATTGGAGCTGTC+GGG | 0.514764 | 7.3:+36892358 | MS.gene84206:CDS |
| GAAGTTGTAGCTCAATTGGT+TGG | 0.519901 | 7.3:+36893838 | MS.gene84206:CDS |
| ATACTGTACTTTCATCAACT+TGG | 0.527353 | 7.3:+36894009 | MS.gene84206:CDS |
| AGAATGTATGCAGACTTCAT+TGG | 0.530282 | 7.3:+36892526 | MS.gene84206:CDS |
| AAGGACGGCATTGGAGCTGT+CGG | 0.537285 | 7.3:+36892357 | MS.gene84206:CDS |
| CTTAGACAAGATGGATGGAA+TGG | 0.537463 | 7.3:+36894474 | MS.gene84206:CDS |
| CTTTGAATCACTCTAGAAGA+AGG | 0.556421 | 7.3:-36893305 | None:intergenic |
| TCCATCCAGTTACATTGGTA+GGG | 0.564058 | 7.3:-36891472 | None:intergenic |
| TAATTACCGGGAAAGCCTGC+AGG | 0.564587 | 7.3:-36891019 | None:intergenic |
| ACTTCATTGGCAGTGCTGGA+AGG | 0.564752 | 7.3:+36892539 | MS.gene84206:CDS |
| AGTCACTTCAAGTCTCCTAA+AGG | 0.566137 | 7.3:+36891508 | MS.gene84206:CDS |
| CATCTTTAGATGGGTCTCAA+AGG | 0.567687 | 7.3:+36892338 | MS.gene84206:intron |
| TCTGGGAGAGGTAGCAGCAA+AGG | 0.572717 | 7.3:+36893349 | MS.gene84206:CDS |
| GCCAAAGGAAGAAAATATCC+GGG | 0.577066 | 7.3:-36892678 | None:intergenic |
| TCCCTACCAATGTAACTGGA+TGG | 0.581193 | 7.3:+36891471 | MS.gene84206:CDS |
| CTGACAACCCAGTTATATCC+CGG | 0.581410 | 7.3:+36892660 | MS.gene84206:CDS |
| GCAAACCATTCTAGTTGAGG+AGG | 0.584171 | 7.3:+36890907 | MS.gene84206:CDS |
| ATTGCAAACCATTCTAGTTG+AGG | 0.585851 | 7.3:+36890904 | MS.gene84206:CDS |
| AATTTCAGTAAATCTGGGAG+AGG | 0.591324 | 7.3:+36893337 | MS.gene84206:CDS |
| ATTCCATCCATCTTGTCTAA+GGG | 0.591924 | 7.3:-36894472 | None:intergenic |
| AAAATATCCGGGATATAACT+GGG | 0.594359 | 7.3:-36892667 | None:intergenic |
| ACATATCCATCCAGTTACAT+TGG | 0.595477 | 7.3:-36891477 | None:intergenic |
| GTCTCTGCAAAACAGGTTTG+GGG | 0.604028 | 7.3:+36890934 | MS.gene84206:CDS |
| GGTTGGAGCTACAAGTGTCT+CGG | 0.609927 | 7.3:+36895089 | MS.gene84206:intron |
| TTAAAACAGGCTATAGCAAG+AGG | 0.616791 | 7.3:+36893272 | MS.gene84206:intron |
| AGGATGCTTGGATTGCAACA+AGG | 0.617496 | 7.3:+36894393 | MS.gene84206:intron |
| TCGACGATGATCCAAAACAA+TGG | 0.620424 | 7.3:+36892503 | MS.gene84206:CDS |
| TCACCCTTAGACAAGATGGA+TGG | 0.624194 | 7.3:+36894469 | MS.gene84206:CDS |
| TTTAGATGGGTCTCAAAGGA+CGG | 0.625244 | 7.3:+36892342 | MS.gene84206:intron |
| TTCAGTTCTCCAGTTTAACA+CGG | 0.628698 | 7.3:+36894076 | MS.gene84206:CDS |
| CTCCTGATAAAAGACTATCC+TGG | 0.636408 | 7.3:+36890966 | MS.gene84206:CDS |
| AAATGAGAAATATATTCTTG+TGG | 0.641580 | 7.3:+36894653 | MS.gene84206:CDS |
| AGATTTCCAAGAGATGCCAA+AGG | 0.646763 | 7.3:-36892693 | None:intergenic |
| AGGAAGAGAATATATTAGTG+TGG | 0.649489 | 7.3:+36894413 | MS.gene84206:CDS |
| GATTTACTGAAATTGCAAAG+TGG | 0.657297 | 7.3:-36893328 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAACAAAAGATAAAATAA+AGG | - | chr7.3:36893029-36893048 | None:intergenic | 10.0% |
| !! | TATATCTAATATTATAATCT+AGG | - | chr7.3:36894776-36894795 | None:intergenic | 10.0% |
| !!! | AAATTATTTTTAAACATAAG+AGG | - | chr7.3:36892047-36892066 | None:intergenic | 10.0% |
| !!! | AGATATTTTTTTATAACATT+TGG | - | chr7.3:36891699-36891718 | None:intergenic | 10.0% |
| !! | AAATTAAGAAAAACTAGATA+AGG | - | chr7.3:36893567-36893586 | None:intergenic | 15.0% |
| !! | ATAAAAATGTATTCATAGAT+AGG | - | chr7.3:36893466-36893485 | None:intergenic | 15.0% |
| !! | TCAATTCACAATAATTATTA+TGG | + | chr7.3:36893201-36893220 | MS.gene84206:intron | 15.0% |
| !!! | AAAGTATATTGATTTACATT+AGG | + | chr7.3:36891734-36891753 | MS.gene84206:intron | 15.0% |
| !!! | AATGTAAATCAATATACTTT+TGG | - | chr7.3:36891734-36891753 | None:intergenic | 15.0% |
| !!! | TTGATAATAATTTGAGAAAA+CGG | + | chr7.3:36891889-36891908 | MS.gene84206:intron | 15.0% |
| !! | AAAACAGTTTATAGTCTATA+TGG | + | chr7.3:36894950-36894969 | MS.gene84206:intron | 20.0% |
| !! | AAAGTCAAAATAACAAATAG+TGG | - | chr7.3:36892289-36892308 | None:intergenic | 20.0% |
| !! | AAATGAGAAATATATTCTTG+TGG | + | chr7.3:36894653-36894672 | MS.gene84206:CDS | 20.0% |
| !! | AAGAAATGTATGTTAATTAC+CGG | - | chr7.3:36891035-36891054 | None:intergenic | 20.0% |
| !! | ATAAAATCTTTAATCCTATC+TGG | - | chr7.3:36890995-36891014 | None:intergenic | 20.0% |
| !! | ATATTCTACATTATATACAC+CGG | + | chr7.3:36893758-36893777 | MS.gene84206:intron | 20.0% |
| !! | ATCATCAATTGAAATTTCTT+TGG | - | chr7.3:36895286-36895305 | None:intergenic | 20.0% |
| !! | TACTCAACAATTAAATTTGA+AGG | + | chr7.3:36895257-36895276 | MS.gene84206:CDS | 20.0% |
| !! | TCATCAATTGAAATTTCTTT+GGG | - | chr7.3:36895285-36895304 | None:intergenic | 20.0% |
| !! | TTATTGTATTAATGCAATGT+TGG | + | chr7.3:36893510-36893529 | MS.gene84206:intron | 20.0% |
| !!! | ATGAAGCCAATAATAATTTT+CGG | + | chr7.3:36894445-36894464 | MS.gene84206:CDS | 20.0% |
| !!! | ATTTGATTAGTTTTTATGGT+TGG | + | chr7.3:36891591-36891610 | MS.gene84206:intron | 20.0% |
| !!! | GAGTATTTGATTAGTTTTTA+TGG | + | chr7.3:36891587-36891606 | MS.gene84206:intron | 20.0% |
| !!! | TCTATGAATACATTTTTATC+AGG | + | chr7.3:36893467-36893486 | MS.gene84206:intron | 20.0% |
| !!! | TGTTTTTATATAAGCTATGT+TGG | - | chr7.3:36893001-36893020 | None:intergenic | 20.0% |
| !!! | TTGTTATTTTGACTTTTATG+TGG | + | chr7.3:36892293-36892312 | MS.gene84206:intron | 20.0% |
| !!! | TTTTGAATTATTACTCTTCA+AGG | + | chr7.3:36894337-36894356 | MS.gene84206:intron | 20.0% |
| !!! | TTTTTTCTATCACAAATGTA+TGG | + | chr7.3:36892064-36892083 | MS.gene84206:intron | 20.0% |
| ! | AAAAGATGTAGCTTATTGTT+AGG | + | chr7.3:36892809-36892828 | MS.gene84206:intron | 25.0% |
| ! | AAAGCTAAAAGAATGTAACA+TGG | - | chr7.3:36893955-36893974 | None:intergenic | 25.0% |
| ! | AGAAATGTATGTTAATTACC+GGG | - | chr7.3:36891034-36891053 | None:intergenic | 25.0% |
| ! | ATAGAGAATGATAAGTAAAC+AGG | - | chr7.3:36891400-36891419 | None:intergenic | 25.0% |
| ! | ATTATAATCTAGGTCAAACA+GGG | - | chr7.3:36894766-36894785 | None:intergenic | 25.0% |
| ! | ATTTCCATACAAAAACAAGA+AGG | - | chr7.3:36892575-36892594 | None:intergenic | 25.0% |
| ! | GAATTCATGAAGAAAACTTA+CGG | + | chr7.3:36892400-36892419 | MS.gene84206:intron | 25.0% |
| ! | TAATTCTCATAAGCGAAATA+AGG | - | chr7.3:36894728-36894747 | None:intergenic | 25.0% |
| ! | TATTATAATCTAGGTCAAAC+AGG | - | chr7.3:36894767-36894786 | None:intergenic | 25.0% |
| ! | TGCAAAAAATAGTTACAACA+AGG | - | chr7.3:36894227-36894246 | None:intergenic | 25.0% |
| ! | TTACATTCAGATAAATTCAG+TGG | + | chr7.3:36894310-36894329 | MS.gene84206:intron | 25.0% |
| ! | TTAGGTTAAGATTATGCTAA+TGG | + | chr7.3:36893675-36893694 | MS.gene84206:intron | 25.0% |
| ! | TTATGCTTTCATCTTTAGAT+GGG | + | chr7.3:36892329-36892348 | MS.gene84206:intron | 25.0% |
| ! | TTGTTTCATCATAATATCTC+AGG | + | chr7.3:36893804-36893823 | MS.gene84206:intron | 25.0% |
| ! | TTTATGCTTTCATCTTTAGA+TGG | + | chr7.3:36892328-36892347 | MS.gene84206:intron | 25.0% |
| ! | TTTCATAATACGTGTCATAA+TGG | + | chr7.3:36894597-36894616 | MS.gene84206:intron | 25.0% |
| ! | TTTCGCTTATGAGAATTAAT+TGG | + | chr7.3:36894730-36894749 | MS.gene84206:intron | 25.0% |
| ! | TTTGCAATTTCAGTAAATCT+GGG | + | chr7.3:36893332-36893351 | MS.gene84206:CDS | 25.0% |
| ! | TTTGGATTTGACATTAAAAC+AGG | + | chr7.3:36893259-36893278 | MS.gene84206:intron | 25.0% |
| !! | AAAAACTGATTCAAGATTCT+TGG | + | chr7.3:36893592-36893611 | MS.gene84206:intron | 25.0% |
| !! | AAAACTGATTCAAGATTCTT+GGG | + | chr7.3:36893593-36893612 | MS.gene84206:intron | 25.0% |
| !! | AACTTCACAACTTTAGAAAA+TGG | + | chr7.3:36891109-36891128 | MS.gene84206:intron | 25.0% |
| !! | AAGAATCTTGAATCAGTTTT+TGG | - | chr7.3:36893593-36893612 | None:intergenic | 25.0% |
| !! | AAGGTATCCTAAAAATTATG+TGG | - | chr7.3:36893894-36893913 | None:intergenic | 25.0% |
| !! | ACTTCACAACTTTAGAAAAT+GGG | + | chr7.3:36891110-36891129 | MS.gene84206:intron | 25.0% |
| !! | GTACAGTATATGATTTTACA+AGG | - | chr7.3:36893998-36894017 | None:intergenic | 25.0% |
| !! | TACTAGCATAAGTACTTTTA+GGG | + | chr7.3:36892911-36892930 | MS.gene84206:intron | 25.0% |
| !! | TGATTTGTCATTGTTAAGAT+TGG | - | chr7.3:36894159-36894178 | None:intergenic | 25.0% |
| !! | TGGTAAACCACATAATTTTT+AGG | + | chr7.3:36893884-36893903 | MS.gene84206:intron | 25.0% |
| !! | TGTAATTTTGTCATGAATAC+CGG | - | chr7.3:36893780-36893799 | None:intergenic | 25.0% |
| !! | TGTTCCTATAAACTTTTTGA+TGG | + | chr7.3:36891783-36891802 | MS.gene84206:intron | 25.0% |
| !!! | AGTTTTAATAGTAATCTGCT+TGG | - | chr7.3:36893121-36893140 | None:intergenic | 25.0% |
| !!! | AGTTTTTTCAATTTTCCGAT+TGG | + | chr7.3:36894361-36894380 | MS.gene84206:intron | 25.0% |
| !!! | CTATTATCAGAGTTTTATGA+AGG | + | chr7.3:36894534-36894553 | MS.gene84206:intron | 25.0% |
| !!! | CTTATTTTGATAAGCTCTTT+AGG | + | chr7.3:36894922-36894941 | MS.gene84206:intron | 25.0% |
| !!! | GAAGTTTTATGTTTCTTTCA+AGG | + | chr7.3:36894698-36894717 | MS.gene84206:CDS | 25.0% |
| !!! | GTTGAAGATTTTAGGATAAA+TGG | + | chr7.3:36894818-36894837 | MS.gene84206:intron | 25.0% |
| !!! | TATTTTGACTTTTATGTGGT+TGG | + | chr7.3:36892297-36892316 | MS.gene84206:intron | 25.0% |
| !!! | TGAAATGCTTTAAAACTTGA+TGG | + | chr7.3:36891188-36891207 | MS.gene84206:intron | 25.0% |
| AAAAGTTGAAAGATGCTGAA+TGG | + | chr7.3:36895232-36895251 | MS.gene84206:CDS | 30.0% | |
| AAAATATCCGGGATATAACT+GGG | - | chr7.3:36892670-36892689 | None:intergenic | 30.0% | |
| AAAGTTGAAAGATGCTGAAT+GGG | + | chr7.3:36895233-36895252 | MS.gene84206:CDS | 30.0% | |
| AATATCTCAGGAAGAAGTTT+GGG | + | chr7.3:36893816-36893835 | MS.gene84206:intron | 30.0% | |
| ACTAGAAATTCATCTCATGT+TGG | - | chr7.3:36891228-36891247 | None:intergenic | 30.0% | |
| ACTCAAAATGCAAACATTCT+TGG | - | chr7.3:36891571-36891590 | None:intergenic | 30.0% | |
| AGAATGAGCAAACCTATTAA+CGG | - | chr7.3:36891162-36891181 | None:intergenic | 30.0% | |
| AGGAAGAGAATATATTAGTG+TGG | + | chr7.3:36894413-36894432 | MS.gene84206:CDS | 30.0% | |
| AGTACTAGTTGAACTTATGA+AGG | + | chr7.3:36895068-36895087 | MS.gene84206:intron | 30.0% | |
| AGTGATACAATCAAGACTAA+GGG | + | chr7.3:36891245-36891264 | MS.gene84206:intron | 30.0% | |
| ATACTGTACTTTCATCAACT+TGG | + | chr7.3:36894009-36894028 | MS.gene84206:CDS | 30.0% | |
| ATCTCTTGGAAATCTTACTA+AGG | + | chr7.3:36892701-36892720 | MS.gene84206:CDS | 30.0% | |
| CATCCTGAAATAATTCCAAT+CGG | - | chr7.3:36894379-36894398 | None:intergenic | 30.0% | |
| CCTTCCATCAAAAAGTTTAT+AGG | - | chr7.3:36891790-36891809 | None:intergenic | 30.0% | |
| CTAAAGTTGTGAAGTTTAAC+AGG | - | chr7.3:36891105-36891124 | None:intergenic | 30.0% | |
| CTTTGCAATTTCAGTAAATC+TGG | + | chr7.3:36893331-36893350 | MS.gene84206:CDS | 30.0% | |
| GAATTTATCTGAATGTAACC+TGG | - | chr7.3:36894308-36894327 | None:intergenic | 30.0% | |
| GATTTACTGAAATTGCAAAG+TGG | - | chr7.3:36893331-36893350 | None:intergenic | 30.0% | |
| GGTGAACCGAAAATTATTAT+TGG | - | chr7.3:36894454-36894473 | None:intergenic | 30.0% | |
| GTTAAGATTATGCTAATGGT+AGG | + | chr7.3:36893679-36893698 | MS.gene84206:intron | 30.0% | |
| TAATATCTCAGGAAGAAGTT+TGG | + | chr7.3:36893815-36893834 | MS.gene84206:intron | 30.0% | |
| TAGTGATACAATCAAGACTA+AGG | + | chr7.3:36891244-36891263 | MS.gene84206:intron | 30.0% | |
| TATCATTCTCTATATGATGC+AGG | + | chr7.3:36891407-36891426 | MS.gene84206:intron | 30.0% | |
| TCGTTCATTAGAACAAAGAT+CGG | - | chr7.3:36894188-36894207 | None:intergenic | 30.0% | |
| TCTATTTAAACACGTGAAAC+TGG | + | chr7.3:36892732-36892751 | MS.gene84206:intron | 30.0% | |
| TGTGAATTGATAGAGAGAAA+AGG | - | chr7.3:36893191-36893210 | None:intergenic | 30.0% | |
| TTGTATTAATGCAATGTTGG+AGG | + | chr7.3:36893513-36893532 | MS.gene84206:intron | 30.0% | |
| TTTCCGATTGGAATTATTTC+AGG | + | chr7.3:36894373-36894392 | MS.gene84206:intron | 30.0% | |
| TTTGTCATTGTTAAGATTGG+TGG | - | chr7.3:36894156-36894175 | None:intergenic | 30.0% | |
| ! | AAAGATTTTATTCTACCTGC+AGG | + | chr7.3:36891004-36891023 | MS.gene84206:CDS | 30.0% |
| ! | AATGGAGAGATCTCATTTTA+TGG | + | chr7.3:36894492-36894511 | MS.gene84206:CDS | 30.0% |
| ! | AATTGATTCTCTGATCCAAT+GGG | + | chr7.3:36893619-36893638 | MS.gene84206:intron | 30.0% |
| ! | ACCTATTTTCCAATTCCATT+AGG | - | chr7.3:36895197-36895216 | None:intergenic | 30.0% |
| ! | AGTATATGATTTTACAAGGC+CGG | - | chr7.3:36893994-36894013 | None:intergenic | 30.0% |
| ! | CATACAGTTGTGTAATGTTT+TGG | + | chr7.3:36893241-36893260 | MS.gene84206:intron | 30.0% |
| ! | CCTATAAACTTTTTGATGGA+AGG | + | chr7.3:36891787-36891806 | MS.gene84206:intron | 30.0% |
| ! | CTACTAGCATAAGTACTTTT+AGG | + | chr7.3:36892910-36892929 | MS.gene84206:intron | 30.0% |
| ! | GATACCTTTATTTCTTATCG+TGG | + | chr7.3:36893906-36893925 | MS.gene84206:intron | 30.0% |
| ! | TAATAGGTTTGCTCATTCTT+TGG | + | chr7.3:36891163-36891182 | MS.gene84206:intron | 30.0% |
| ! | TAATTGATTCTCTGATCCAA+TGG | + | chr7.3:36893618-36893637 | MS.gene84206:intron | 30.0% |
| ! | TCGTTACAGTTGAAGATTTT+AGG | + | chr7.3:36894810-36894829 | MS.gene84206:intron | 30.0% |
| ! | TTGAAAGCATGAAACTAACA+AGG | - | chr7.3:36893424-36893443 | None:intergenic | 30.0% |
| !!! | AGTTATTAGTTTTTCCAGGT+GGG | + | chr7.3:36892464-36892483 | MS.gene84206:intron | 30.0% |
| !!! | TCACAGTTATTAGTTTTTCC+AGG | + | chr7.3:36892460-36892479 | MS.gene84206:intron | 30.0% |
| AAAGTTGACAATTCACCTGA+TGG | - | chr7.3:36892195-36892214 | None:intergenic | 35.0% | |
| AATTAGCTAAAAACAGCCGA+TGG | - | chr7.3:36892966-36892985 | None:intergenic | 35.0% | |
| AATTTCAGTAAATCTGGGAG+AGG | + | chr7.3:36893337-36893356 | MS.gene84206:CDS | 35.0% | |
| ACATATCCATCCAGTTACAT+TGG | - | chr7.3:36891480-36891499 | None:intergenic | 35.0% | |
| AGAATGTATGCAGACTTCAT+TGG | + | chr7.3:36892526-36892545 | MS.gene84206:CDS | 35.0% | |
| ATCGATTAGATGAAGTTGGA+GGG | + | chr7.3:36891371-36891390 | MS.gene84206:intron | 35.0% | |
| ATCTTCAACTGTAACGATCA+TGG | - | chr7.3:36894807-36894826 | None:intergenic | 35.0% | |
| ATGAGATACCATTGTGGTAA+GGG | - | chr7.3:36892626-36892645 | None:intergenic | 35.0% | |
| ATTCCATCCATCTTGTCTAA+GGG | - | chr7.3:36894475-36894494 | None:intergenic | 35.0% | |
| CATCAACTTGGTTGATTGTA+CGG | + | chr7.3:36894021-36894040 | MS.gene84206:CDS | 35.0% | |
| CTAGTTGAACTTATGAAGGT+TGG | + | chr7.3:36895072-36895091 | MS.gene84206:intron | 35.0% | |
| GAAAATATCCGGGATATAAC+TGG | - | chr7.3:36892671-36892690 | None:intergenic | 35.0% | |
| GAATGAGCAAACCTATTAAC+GGG | - | chr7.3:36891161-36891180 | None:intergenic | 35.0% | |
| GCCTAATGGAATTGGAAAAT+AGG | + | chr7.3:36895193-36895212 | MS.gene84206:CDS | 35.0% | |
| TAAAGAAACCCTTACCACAA+TGG | + | chr7.3:36892615-36892634 | MS.gene84206:intron | 35.0% | |
| TCTCATTGTGTATGTCAATG+AGG | + | chr7.3:36891666-36891685 | MS.gene84206:intron | 35.0% | |
| TGAAACATCTTCCCGTTAAT+AGG | + | chr7.3:36891147-36891166 | MS.gene84206:intron | 35.0% | |
| TGCCAAAGGAAGAAAATATC+CGG | - | chr7.3:36892682-36892701 | None:intergenic | 35.0% | |
| TGGAATTATTTCAGGATGCT+TGG | + | chr7.3:36894381-36894400 | MS.gene84206:intron | 35.0% | |
| TTAAAACAGGCTATAGCAAG+AGG | + | chr7.3:36893272-36893291 | MS.gene84206:intron | 35.0% | |
| TTCAGTTCTCCAGTTTAACA+CGG | + | chr7.3:36894076-36894095 | MS.gene84206:CDS | 35.0% | |
| TTCATTAGAACAAAGATCGG+TGG | - | chr7.3:36894185-36894204 | None:intergenic | 35.0% | |
| TTCTCTATATGATGCAGGAT+CGG | + | chr7.3:36891412-36891431 | MS.gene84206:intron | 35.0% | |
| TTGAATGTAACCACACATGT+CGG | + | chr7.3:36891917-36891936 | MS.gene84206:intron | 35.0% | |
| ! | ATTGCAAACCATTCTAGTTG+AGG | + | chr7.3:36890904-36890923 | MS.gene84206:CDS | 35.0% |
| ! | CAGTTGATGTTTCACATTCA+CGG | + | chr7.3:36891324-36891343 | MS.gene84206:intron | 35.0% |
| ! | CTTCATCGATTAGATGAAGT+TGG | + | chr7.3:36891367-36891386 | MS.gene84206:intron | 35.0% |
| ! | CTTTGAATCACTCTAGAAGA+AGG | - | chr7.3:36893308-36893327 | None:intergenic | 35.0% |
| ! | GCATACATTCTCCATTGTTT+TGG | - | chr7.3:36892517-36892536 | None:intergenic | 35.0% |
| ! | GTATATGATTTTACAAGGCC+GGG | - | chr7.3:36893993-36894012 | None:intergenic | 35.0% |
| ! | TGAGTACTTGTGACACTTTT+TGG | + | chr7.3:36894881-36894900 | MS.gene84206:intron | 35.0% |
| !! | AAGCTATTGATGACGCAATT+AGG | + | chr7.3:36893657-36893676 | MS.gene84206:intron | 35.0% |
| !! | ATTCTGGCTTAGTGAGAATT+GGG | + | chr7.3:36895134-36895153 | MS.gene84206:CDS | 35.0% |
| !! | GAGTACTTGTGACACTTTTT+GGG | + | chr7.3:36894882-36894901 | MS.gene84206:intron | 35.0% |
| !!! | CAGTTATTAGTTTTTCCAGG+TGG | + | chr7.3:36892463-36892482 | MS.gene84206:intron | 35.0% |
| !!! | CATGCCTTCTTGTTTTTGTA+TGG | + | chr7.3:36892568-36892587 | MS.gene84206:intron | 35.0% |
| AAAGCCTTCTTAGCAAACCT+TGG | + | chr7.3:36892856-36892875 | MS.gene84206:intron | 40.0% | |
| AACATAAGAGGACACAGTGA+AGG | - | chr7.3:36892035-36892054 | None:intergenic | 40.0% | |
| AAGCCTTCTTAGCAAACCTT+GGG | + | chr7.3:36892857-36892876 | MS.gene84206:intron | 40.0% | |
| AAGCTATGTTGGAGAACTCA+AGG | - | chr7.3:36892990-36893009 | None:intergenic | 40.0% | |
| ACACTTGCACAAGAGTTCAA+AGG | + | chr7.3:36891268-36891287 | MS.gene84206:intron | 40.0% | |
| ACATGCTTACCGTGTTAAAC+TGG | - | chr7.3:36894088-36894107 | None:intergenic | 40.0% | |
| AGATTTCCAAGAGATGCCAA+AGG | - | chr7.3:36892696-36892715 | None:intergenic | 40.0% | |
| AGCAACAATGACATGCCTTT+AGG | - | chr7.3:36891526-36891545 | None:intergenic | 40.0% | |
| AGCATTGCACTTCTGATTGA+AGG | - | chr7.3:36891973-36891992 | None:intergenic | 40.0% | |
| AGTCACTTCAAGTCTCCTAA+AGG | + | chr7.3:36891508-36891527 | MS.gene84206:CDS | 40.0% | |
| AGTGAGAATTGGGAGAGAAA+GGG | + | chr7.3:36895144-36895163 | MS.gene84206:CDS | 40.0% | |
| ATCCATCCAGTTACATTGGT+AGG | - | chr7.3:36891476-36891495 | None:intergenic | 40.0% | |
| CAACCTATGAAGCACATACA+CGG | + | chr7.3:36891837-36891856 | MS.gene84206:intron | 40.0% | |
| CATCTTTAGATGGGTCTCAA+AGG | + | chr7.3:36892338-36892357 | MS.gene84206:intron | 40.0% | |
| CATGAGATACCATTGTGGTA+AGG | - | chr7.3:36892627-36892646 | None:intergenic | 40.0% | |
| CATTCCATCCATCTTGTCTA+AGG | - | chr7.3:36894476-36894495 | None:intergenic | 40.0% | |
| CTAGAAGGTTCTTGGTTAGT+TGG | + | chr7.3:36892779-36892798 | MS.gene84206:intron | 40.0% | |
| CTCCTGATAAAAGACTATCC+TGG | + | chr7.3:36890966-36890985 | MS.gene84206:CDS | 40.0% | |
| CTTAGACAAGATGGATGGAA+TGG | + | chr7.3:36894474-36894493 | MS.gene84206:CDS | 40.0% | |
| GAAGTTGTAGCTCAATTGGT+TGG | + | chr7.3:36893838-36893857 | MS.gene84206:CDS | 40.0% | |
| GAATGTAACATGGCAACCAA+CGG | - | chr7.3:36893945-36893964 | None:intergenic | 40.0% | |
| GAGCTTATGGAAACCACTTA+TGG | + | chr7.3:36892935-36892954 | MS.gene84206:intron | 40.0% | |
| GCATTGCACTTCTGATTGAA+GGG | - | chr7.3:36891972-36891991 | None:intergenic | 40.0% | |
| GCCAAAGGAAGAAAATATCC+GGG | - | chr7.3:36892681-36892700 | None:intergenic | 40.0% | |
| GCTGCCACGATAAGAAATAA+AGG | - | chr7.3:36893913-36893932 | None:intergenic | 40.0% | |
| GGAACATATACAACGACTAG+AGG | - | chr7.3:36891769-36891788 | None:intergenic | 40.0% | |
| GTGTATGTCAATGAGGCTTA+CGG | + | chr7.3:36891673-36891692 | MS.gene84206:intron | 40.0% | |
| TAAAATTCCCCTTCACTTGC+AGG | + | chr7.3:36892118-36892137 | MS.gene84206:intron | 40.0% | |
| TAGGAGACTTGAAGTGACTA+TGG | - | chr7.3:36891507-36891526 | None:intergenic | 40.0% | |
| TAGTGAGAATTGGGAGAGAA+AGG | + | chr7.3:36895143-36895162 | MS.gene84206:CDS | 40.0% | |
| TCAACTGTAACGATCATGGA+AGG | - | chr7.3:36894803-36894822 | None:intergenic | 40.0% | |
| TCCATCCAGTTACATTGGTA+GGG | - | chr7.3:36891475-36891494 | None:intergenic | 40.0% | |
| TCGACGATGATCCAAAACAA+TGG | + | chr7.3:36892503-36892522 | MS.gene84206:CDS | 40.0% | |
| TTCCAATTCCATTAGGCTAC+TGG | - | chr7.3:36895190-36895209 | None:intergenic | 40.0% | |
| TTGGGAAGTTGTAGCTCAAT+TGG | + | chr7.3:36893834-36893853 | MS.gene84206:CDS | 40.0% | |
| TTGTACGGCTTCTTCATCTT+TGG | + | chr7.3:36894036-36894055 | MS.gene84206:CDS | 40.0% | |
| TTTAATCCTATCTGGAAGCC+AGG | - | chr7.3:36890987-36891006 | None:intergenic | 40.0% | |
| TTTAGATGGGTCTCAAAGGA+CGG | + | chr7.3:36892342-36892361 | MS.gene84206:intron | 40.0% | |
| TTTCTTCCTTTGGCATCTCT+TGG | + | chr7.3:36892687-36892706 | MS.gene84206:CDS | 40.0% | |
| ! | AGCCAGGATAGTCTTTTATC+AGG | - | chr7.3:36890971-36890990 | None:intergenic | 40.0% |
| ! | CATCGATTAGATGAAGTTGG+AGG | + | chr7.3:36891370-36891389 | MS.gene84206:intron | 40.0% |
| ! | GTTTTACATTCCACTGTTCC+AGG | + | chr7.3:36894287-36894306 | MS.gene84206:CDS | 40.0% |
| ! | TCCCGGATATTTTCTTCCTT+TGG | + | chr7.3:36892677-36892696 | MS.gene84206:CDS | 40.0% |
| ! | TGGTTTGGGCATATTGATAC+TGG | + | chr7.3:36893864-36893883 | MS.gene84206:CDS | 40.0% |
| !! | CAATTGGTTGGTCTTGGTTT+GGG | + | chr7.3:36893850-36893869 | MS.gene84206:CDS | 40.0% |
| !! | CATTCTGGCTTAGTGAGAAT+TGG | + | chr7.3:36895133-36895152 | MS.gene84206:CDS | 40.0% |
| !! | GATAGGTTCTAGAAGGTTCT+TGG | + | chr7.3:36892771-36892790 | MS.gene84206:intron | 40.0% |
| !! | GTACTTTTAGGGAGAGCTTA+TGG | + | chr7.3:36892922-36892941 | MS.gene84206:intron | 40.0% |
| !! | GTGAAGGGGAATTTTAACAC+AGG | - | chr7.3:36892114-36892133 | None:intergenic | 40.0% |
| !! | TCAATTGGTTGGTCTTGGTT+TGG | + | chr7.3:36893849-36893868 | MS.gene84206:CDS | 40.0% |
| !!! | TTCTTTTAGCTTTTGACCGC+AGG | + | chr7.3:36893962-36893981 | MS.gene84206:intron | 40.0% |
| AACTGGACATAGTCTTTGCC+AGG | + | chr7.3:36892749-36892768 | MS.gene84206:intron | 45.0% | |
| ACAACAACCGGATACTTGAC+AGG | + | chr7.3:36891946-36891965 | MS.gene84206:intron | 45.0% | |
| ACCACTTATGGCATGTCCAT+CGG | + | chr7.3:36892947-36892966 | MS.gene84206:intron | 45.0% | |
| ACGGTAAGCATGTACTGTGT+GGG | + | chr7.3:36894095-36894114 | MS.gene84206:intron | 45.0% | |
| AGCCTTCTTAGCAAACCTTG+GGG | + | chr7.3:36892858-36892877 | MS.gene84206:intron | 45.0% | |
| AGGATAGGTCTCTGCAAAAC+AGG | + | chr7.3:36890927-36890946 | MS.gene84206:CDS | 45.0% | |
| AGGATGCTTGGATTGCAACA+AGG | + | chr7.3:36894393-36894412 | MS.gene84206:intron | 45.0% | |
| AGGTCTCTGCAAAACAGGTT+TGG | + | chr7.3:36890932-36890951 | MS.gene84206:CDS | 45.0% | |
| CAGTTCCCTACCAATGTAAC+TGG | + | chr7.3:36891467-36891486 | MS.gene84206:CDS | 45.0% | |
| CCAATGGGTCACATGTAAGT+AGG | + | chr7.3:36893634-36893653 | MS.gene84206:intron | 45.0% | |
| CCTACTTACATGTGACCCAT+TGG | - | chr7.3:36893637-36893656 | None:intergenic | 45.0% | |
| CCTATCCTCCTCAACTAGAA+TGG | - | chr7.3:36890915-36890934 | None:intergenic | 45.0% | |
| CTGAATGTAACCTGGAACAG+TGG | - | chr7.3:36894300-36894319 | None:intergenic | 45.0% | |
| CTGACAACCCAGTTATATCC+CGG | + | chr7.3:36892660-36892679 | MS.gene84206:CDS | 45.0% | |
| GAAGCATATGGCAGACATTC+TGG | + | chr7.3:36895118-36895137 | MS.gene84206:CDS | 45.0% | |
| GACATAGTCTTTGCCAGGAT+AGG | + | chr7.3:36892754-36892773 | MS.gene84206:intron | 45.0% | |
| GGTCTCTGCAAAACAGGTTT+GGG | + | chr7.3:36890933-36890952 | MS.gene84206:CDS | 45.0% | |
| GTCAAGTATCCGGTTGTTGT+CGG | - | chr7.3:36891946-36891965 | None:intergenic | 45.0% | |
| GTCTCTGCAAAACAGGTTTG+GGG | + | chr7.3:36890934-36890953 | MS.gene84206:CDS | 45.0% | |
| GTTGGTGTAGGTTCTTTCTC+TGG | + | chr7.3:36892143-36892162 | MS.gene84206:CDS | 45.0% | |
| TACGTGTCATAATGGTGTGC+AGG | + | chr7.3:36894605-36894624 | MS.gene84206:intron | 45.0% | |
| TATTAAGCGTGCTCGCATAC+TGG | + | chr7.3:36894253-36894272 | MS.gene84206:CDS | 45.0% | |
| TCAACTTGCCAGTAGCCTAA+TGG | + | chr7.3:36895179-36895198 | MS.gene84206:CDS | 45.0% | |
| TCACCCTTAGACAAGATGGA+TGG | + | chr7.3:36894469-36894488 | MS.gene84206:CDS | 45.0% | |
| TCATAATGGTGTGCAGGTAG+AGG | + | chr7.3:36894611-36894630 | MS.gene84206:intron | 45.0% | |
| TCCCTACCAATGTAACTGGA+TGG | + | chr7.3:36891471-36891490 | MS.gene84206:CDS | 45.0% | |
| TCTCGGTATTGCGAAGCATA+TGG | + | chr7.3:36895106-36895125 | MS.gene84206:CDS | 45.0% | |
| TGCCAGTAGCCTAATGGAAT+TGG | + | chr7.3:36895185-36895204 | MS.gene84206:CDS | 45.0% | |
| TGCTGCATGAGATACCATTG+TGG | - | chr7.3:36892632-36892651 | None:intergenic | 45.0% | |
| TGTCCGTGTATGTGCTTCAT+AGG | - | chr7.3:36891843-36891862 | None:intergenic | 45.0% | |
| ! | AGCAAACCTTGGGGTTTGTT+CGG | + | chr7.3:36892867-36892886 | MS.gene84206:intron | 45.0% |
| ! | ATGTACTGTGTGGGCTAATG+TGG | + | chr7.3:36894104-36894123 | MS.gene84206:intron | 45.0% |
| ! | CCATTCTAGTTGAGGAGGAT+AGG | + | chr7.3:36890912-36890931 | MS.gene84206:CDS | 45.0% |
| ! | GCAAACCATTCTAGTTGAGG+AGG | + | chr7.3:36890907-36890926 | MS.gene84206:CDS | 45.0% |
| !! | AACCCCAAGGTTTGCTAAGA+AGG | - | chr7.3:36892863-36892882 | None:intergenic | 45.0% |
| !! | ATGGTTGGTTTGTGCACACT+TGG | + | chr7.3:36891606-36891625 | MS.gene84206:intron | 45.0% |
| !! | GAACCTTCTAGAACCTATCC+TGG | - | chr7.3:36892770-36892789 | None:intergenic | 45.0% |
| !! | GTAGCTCAATTGGTTGGTCT+TGG | + | chr7.3:36893844-36893863 | MS.gene84206:CDS | 45.0% |
| !! | TTGCCAGGATAGGTTCTAGA+AGG | + | chr7.3:36892764-36892783 | MS.gene84206:intron | 45.0% |
| !! | ATAATTATTTATTCTAAATT+TGG | + | chr7.3:36894571-36894590 | MS.gene84206:intron | 5.0% |
| !! | TAATTATTTATTCTAAATTT+GGG | + | chr7.3:36894572-36894591 | MS.gene84206:intron | 5.0% |
| !!! | ATAAATAATTATGAATTTTT+AGG | - | chr7.3:36894563-36894582 | None:intergenic | 5.0% |
| ACCAACAGCCTGCAAGTGAA+GGG | - | chr7.3:36892129-36892148 | None:intergenic | 50.0% | |
| AGATTTCCAAATCGCCCACC+TGG | - | chr7.3:36892481-36892500 | None:intergenic | 50.0% | |
| ATTCTACCTGCAGGCTTTCC+CGG | + | chr7.3:36891013-36891032 | MS.gene84206:CDS | 50.0% | |
| CACATACACGGACACTGGAT+AGG | + | chr7.3:36891849-36891868 | MS.gene84206:intron | 50.0% | |
| CACGGTAAGCATGTACTGTG+TGG | + | chr7.3:36894094-36894113 | MS.gene84206:intron | 50.0% | |
| CATGGCAACCAACGGTATTG+TGG | - | chr7.3:36893937-36893956 | None:intergenic | 50.0% | |
| CGGTTCACCCTTAGACAAGA+TGG | + | chr7.3:36894465-36894484 | MS.gene84206:CDS | 50.0% | |
| GACTATCCTGGCTTCCAGAT+AGG | + | chr7.3:36890978-36890997 | MS.gene84206:CDS | 50.0% | |
| GGTTGGAGCTACAAGTGTCT+CGG | + | chr7.3:36895089-36895108 | MS.gene84206:intron | 50.0% | |
| GTCAATCCGAACAAACCCCA+AGG | - | chr7.3:36892876-36892895 | None:intergenic | 50.0% | |
| TAATTACCGGGAAAGCCTGC+AGG | - | chr7.3:36891022-36891041 | None:intergenic | 50.0% | |
| TGAAGCACATACACGGACAC+TGG | + | chr7.3:36891844-36891863 | MS.gene84206:intron | 50.0% | |
| TGAAGGGCCTGTCAAGTATC+CGG | - | chr7.3:36891956-36891975 | None:intergenic | 50.0% | |
| TGTCGGTATCCGACAACAAC+CGG | + | chr7.3:36891934-36891953 | MS.gene84206:intron | 50.0% | |
| TTGTCGGATACCGACATGTG+TGG | - | chr7.3:36891930-36891949 | None:intergenic | 50.0% | |
| ! | ACTTCATTGGCAGTGCTGGA+AGG | + | chr7.3:36892539-36892558 | MS.gene84206:CDS | 50.0% |
| ! | GGGCGCTTATTCATTGGTCT+GGG | + | chr7.3:36892378-36892397 | MS.gene84206:intron | 50.0% |
| ! | GTTTTTCCAGGTGGGCGATT+TGG | + | chr7.3:36892472-36892491 | MS.gene84206:intron | 50.0% |
| ! | TTTTGACCGCAGGATACACC+CGG | + | chr7.3:36893972-36893991 | MS.gene84206:intron | 50.0% |
| CACCAACAGCCTGCAAGTGA+AGG | - | chr7.3:36892130-36892149 | None:intergenic | 55.0% | |
| CACTTGCAGGCTGTTGGTGT+AGG | + | chr7.3:36892131-36892150 | MS.gene84206:intron | 55.0% | |
| CCAACAGCCTGCAAGTGAAG+GGG | - | chr7.3:36892128-36892147 | None:intergenic | 55.0% | |
| CGGGCGCTTATTCATTGGTC+TGG | + | chr7.3:36892377-36892396 | MS.gene84206:intron | 55.0% | |
| GCAGACTTCATTGGCAGTGC+TGG | + | chr7.3:36892535-36892554 | MS.gene84206:CDS | 55.0% | |
| GCCGATGGACATGCCATAAG+TGG | - | chr7.3:36892951-36892970 | None:intergenic | 55.0% | |
| GCTGTCGGGCGCTTATTCAT+TGG | + | chr7.3:36892372-36892391 | MS.gene84206:CDS | 55.0% | |
| TCTGGGAGAGGTAGCAGCAA+AGG | + | chr7.3:36893349-36893368 | MS.gene84206:CDS | 55.0% | |
| TGGCAGCACCACAATACCGT+TGG | + | chr7.3:36893926-36893945 | MS.gene84206:intron | 55.0% | |
| TGGGTCTCAAAGGACGGCAT+TGG | + | chr7.3:36892348-36892367 | MS.gene84206:CDS | 55.0% | |
| ! | AAGGACGGCATTGGAGCTGT+CGG | + | chr7.3:36892357-36892376 | MS.gene84206:CDS | 55.0% |
| ACAAGGCCGGGTGTATCCTG+CGG | - | chr7.3:36893981-36894000 | None:intergenic | 60.0% | |
| AGCAGCAGAAGCAGCTGCTG+TGG | - | chr7.3:36892171-36892190 | None:intergenic | 60.0% | |
| CCCCTTCACTTGCAGGCTGT+TGG | + | chr7.3:36892125-36892144 | MS.gene84206:intron | 60.0% | |
| CTGCTTCTGCTGCTGCCATC+AGG | + | chr7.3:36892177-36892196 | MS.gene84206:CDS | 60.0% | |
| ! | AGGACGGCATTGGAGCTGTC+GGG | + | chr7.3:36892358-36892377 | MS.gene84206:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 36890872 | 36895320 | 36890872 | ID=MS.gene84206 |
| chr7.3 | mRNA | 36890872 | 36895320 | 36890872 | ID=MS.gene84206.t1;Parent=MS.gene84206 |
| chr7.3 | exon | 36890872 | 36891034 | 36890872 | ID=MS.gene84206.t1.exon1;Parent=MS.gene84206.t1 |
| chr7.3 | CDS | 36890872 | 36891034 | 36890872 | ID=cds.MS.gene84206.t1;Parent=MS.gene84206.t1 |
| chr7.3 | exon | 36891429 | 36891529 | 36891429 | ID=MS.gene84206.t1.exon2;Parent=MS.gene84206.t1 |
| chr7.3 | CDS | 36891429 | 36891529 | 36891429 | ID=cds.MS.gene84206.t1;Parent=MS.gene84206.t1 |
| chr7.3 | exon | 36892140 | 36892198 | 36892140 | ID=MS.gene84206.t1.exon3;Parent=MS.gene84206.t1 |
| chr7.3 | CDS | 36892140 | 36892198 | 36892140 | ID=cds.MS.gene84206.t1;Parent=MS.gene84206.t1 |
| chr7.3 | exon | 36892347 | 36892393 | 36892347 | ID=MS.gene84206.t1.exon4;Parent=MS.gene84206.t1 |
| chr7.3 | CDS | 36892347 | 36892393 | 36892347 | ID=cds.MS.gene84206.t1;Parent=MS.gene84206.t1 |
| chr7.3 | exon | 36892482 | 36892560 | 36892482 | ID=MS.gene84206.t1.exon5;Parent=MS.gene84206.t1 |
| chr7.3 | CDS | 36892482 | 36892560 | 36892482 | ID=cds.MS.gene84206.t1;Parent=MS.gene84206.t1 |
| chr7.3 | exon | 36892650 | 36892722 | 36892650 | ID=MS.gene84206.t1.exon6;Parent=MS.gene84206.t1 |
| chr7.3 | CDS | 36892650 | 36892722 | 36892650 | ID=cds.MS.gene84206.t1;Parent=MS.gene84206.t1 |
| chr7.3 | exon | 36893281 | 36893370 | 36893281 | ID=MS.gene84206.t1.exon7;Parent=MS.gene84206.t1 |
| chr7.3 | CDS | 36893281 | 36893370 | 36893281 | ID=cds.MS.gene84206.t1;Parent=MS.gene84206.t1 |
| chr7.3 | exon | 36893826 | 36893885 | 36893826 | ID=MS.gene84206.t1.exon8;Parent=MS.gene84206.t1 |
| chr7.3 | CDS | 36893826 | 36893885 | 36893826 | ID=cds.MS.gene84206.t1;Parent=MS.gene84206.t1 |
| chr7.3 | exon | 36893984 | 36894097 | 36893984 | ID=MS.gene84206.t1.exon9;Parent=MS.gene84206.t1 |
| chr7.3 | CDS | 36893984 | 36894097 | 36893984 | ID=cds.MS.gene84206.t1;Parent=MS.gene84206.t1 |
| chr7.3 | exon | 36894248 | 36894308 | 36894248 | ID=MS.gene84206.t1.exon10;Parent=MS.gene84206.t1 |
| chr7.3 | CDS | 36894248 | 36894308 | 36894248 | ID=cds.MS.gene84206.t1;Parent=MS.gene84206.t1 |
| chr7.3 | exon | 36894395 | 36894513 | 36894395 | ID=MS.gene84206.t1.exon11;Parent=MS.gene84206.t1 |
| chr7.3 | CDS | 36894395 | 36894513 | 36894395 | ID=cds.MS.gene84206.t1;Parent=MS.gene84206.t1 |
| chr7.3 | exon | 36894627 | 36894719 | 36894627 | ID=MS.gene84206.t1.exon12;Parent=MS.gene84206.t1 |
| chr7.3 | CDS | 36894627 | 36894719 | 36894627 | ID=cds.MS.gene84206.t1;Parent=MS.gene84206.t1 |
| chr7.3 | exon | 36895090 | 36895320 | 36895090 | ID=MS.gene84206.t1.exon13;Parent=MS.gene84206.t1 |
| chr7.3 | CDS | 36895090 | 36895320 | 36895090 | ID=cds.MS.gene84206.t1;Parent=MS.gene84206.t1 |
| Gene Sequence |
| Protein sequence |
