Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89605.t1 | GAU31224.1 | 96.5 | 229 | 8 | 0 | 1 | 229 | 3 | 231 | 1.70E-116 | 428.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89605.t1 | Q8LCV1 | 77.8 | 230 | 50 | 1 | 1 | 229 | 1 | 230 | 6.3e-96 | 351.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89605.t1 | A0A2Z6MF52 | 96.5 | 229 | 8 | 0 | 1 | 229 | 3 | 231 | 1.2e-116 | 428.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene89605 | 0.814873 | 1.23E-51 | -1.69E-46 |
| MS.gene049350 | MS.gene89605 | 0.816693 | 4.85E-52 | -1.69E-46 |
| MS.gene049368 | MS.gene89605 | 0.81116 | 8.05E-51 | -1.69E-46 |
| MS.gene049807 | MS.gene89605 | 0.83751 | 4.98E-57 | -1.69E-46 |
| MS.gene049821 | MS.gene89605 | 0.819173 | 1.33E-52 | -1.69E-46 |
| MS.gene050253 | MS.gene89605 | 0.813072 | 3.08E-51 | -1.69E-46 |
| MS.gene050646 | MS.gene89605 | 0.800061 | 1.72E-48 | -1.69E-46 |
| MS.gene050752 | MS.gene89605 | 0.834092 | 3.66E-56 | -1.69E-46 |
| MS.gene050807 | MS.gene89605 | 0.820208 | 7.75E-53 | -1.69E-46 |
| MS.gene050838 | MS.gene89605 | 0.8413 | 5.17E-58 | -1.69E-46 |
| MS.gene050901 | MS.gene89605 | 0.821901 | 3.16E-53 | -1.69E-46 |
| MS.gene050945 | MS.gene89605 | 0.81743 | 3.31E-52 | -1.69E-46 |
| MS.gene050955 | MS.gene89605 | 0.801881 | 7.30E-49 | -1.69E-46 |
| MS.gene051003 | MS.gene89605 | 0.815718 | 8.01E-52 | -1.69E-46 |
| MS.gene051043 | MS.gene89605 | 0.808853 | 2.53E-50 | -1.69E-46 |
| MS.gene051233 | MS.gene89605 | 0.805345 | 1.40E-49 | -1.69E-46 |
| MS.gene051234 | MS.gene89605 | 0.832315 | 1.01E-55 | -1.69E-46 |
| MS.gene051343 | MS.gene89605 | 0.844982 | 5.39E-59 | -1.69E-46 |
| MS.gene051676 | MS.gene89605 | 0.834895 | 2.30E-56 | -1.69E-46 |
| MS.gene051720 | MS.gene89605 | 0.803017 | 4.26E-49 | -1.69E-46 |
| MS.gene051856 | MS.gene89605 | 0.803847 | 2.87E-49 | -1.69E-46 |
| MS.gene051902 | MS.gene89605 | 0.847106 | 1.43E-59 | -1.69E-46 |
| MS.gene051975 | MS.gene89605 | 0.821387 | 4.15E-53 | -1.69E-46 |
| MS.gene052072 | MS.gene89605 | 0.82422 | 9.08E-54 | -1.69E-46 |
| MS.gene052133 | MS.gene89605 | 0.818403 | 2.00E-52 | -1.69E-46 |
| MS.gene052239 | MS.gene89605 | -0.812309 | 4.52E-51 | -1.69E-46 |
| MS.gene052242 | MS.gene89605 | -0.813941 | 1.98E-51 | -1.69E-46 |
| MS.gene052296 | MS.gene89605 | 0.801598 | 8.35E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene89605 | 0.819837 | 9.41E-53 | -1.69E-46 |
| MS.gene052335 | MS.gene89605 | 0.80798 | 3.88E-50 | -1.69E-46 |
| MS.gene052609 | MS.gene89605 | 0.816461 | 5.46E-52 | -1.69E-46 |
| MS.gene052932 | MS.gene89605 | 0.803415 | 3.53E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene89605 | 0.83235 | 9.94E-56 | -1.69E-46 |
| MS.gene053045 | MS.gene89605 | 0.802278 | 6.05E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene89605 | 0.817037 | 4.06E-52 | -1.69E-46 |
| MS.gene053122 | MS.gene89605 | 0.802118 | 6.53E-49 | -1.69E-46 |
| MS.gene053143 | MS.gene89605 | 0.817066 | 4.00E-52 | -1.69E-46 |
| MS.gene053563 | MS.gene89605 | 0.801613 | 8.29E-49 | -1.69E-46 |
| MS.gene053564 | MS.gene89605 | 0.803769 | 2.98E-49 | -1.69E-46 |
| MS.gene053581 | MS.gene89605 | 0.829075 | 6.30E-55 | -1.69E-46 |
| MS.gene05364 | MS.gene89605 | 0.855734 | 5.17E-62 | -1.69E-46 |
| MS.gene053931 | MS.gene89605 | 0.809348 | 1.98E-50 | -1.69E-46 |
| MS.gene054178 | MS.gene89605 | 0.802736 | 4.87E-49 | -1.69E-46 |
| MS.gene054403 | MS.gene89605 | 0.834117 | 3.61E-56 | -1.69E-46 |
| MS.gene05469 | MS.gene89605 | 0.807788 | 4.26E-50 | -1.69E-46 |
| MS.gene054709 | MS.gene89605 | 0.80907 | 2.27E-50 | -1.69E-46 |
| MS.gene055313 | MS.gene89605 | 0.810469 | 1.14E-50 | -1.69E-46 |
| MS.gene055469 | MS.gene89605 | 0.800628 | 1.32E-48 | -1.69E-46 |
| MS.gene055513 | MS.gene89605 | 0.829754 | 4.31E-55 | -1.69E-46 |
| MS.gene056005 | MS.gene89605 | 0.805327 | 1.41E-49 | -1.69E-46 |
| MS.gene056045 | MS.gene89605 | 0.804407 | 2.19E-49 | -1.69E-46 |
| MS.gene056082 | MS.gene89605 | 0.810025 | 1.41E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene89605 | 0.828549 | 8.45E-55 | -1.69E-46 |
| MS.gene056308 | MS.gene89605 | 0.846563 | 2.01E-59 | -1.69E-46 |
| MS.gene056578 | MS.gene89605 | 0.816798 | 4.59E-52 | -1.69E-46 |
| MS.gene057102 | MS.gene89605 | 0.841116 | 5.77E-58 | -1.69E-46 |
| MS.gene057208 | MS.gene89605 | 0.81018 | 1.31E-50 | -1.69E-46 |
| MS.gene057694 | MS.gene89605 | 0.825942 | 3.56E-54 | -1.69E-46 |
| MS.gene057705 | MS.gene89605 | 0.826481 | 2.65E-54 | -1.69E-46 |
| MS.gene057890 | MS.gene89605 | -0.824319 | 8.61E-54 | -1.69E-46 |
| MS.gene058261 | MS.gene89605 | 0.804607 | 1.99E-49 | -1.69E-46 |
| MS.gene058330 | MS.gene89605 | 0.80229 | 6.02E-49 | -1.69E-46 |
| MS.gene058638 | MS.gene89605 | 0.805934 | 1.05E-49 | -1.69E-46 |
| MS.gene058639 | MS.gene89605 | 0.823652 | 1.23E-53 | -1.69E-46 |
| MS.gene058852 | MS.gene89605 | 0.855171 | 7.54E-62 | -1.69E-46 |
| MS.gene059146 | MS.gene89605 | 0.812984 | 3.22E-51 | -1.69E-46 |
| MS.gene059170 | MS.gene89605 | 0.804482 | 2.11E-49 | -1.69E-46 |
| MS.gene059171 | MS.gene89605 | 0.831559 | 1.56E-55 | -1.69E-46 |
| MS.gene059227 | MS.gene89605 | 0.842464 | 2.54E-58 | -1.69E-46 |
| MS.gene05985 | MS.gene89605 | -0.813637 | 2.31E-51 | -1.69E-46 |
| MS.gene060365 | MS.gene89605 | 0.841519 | 4.52E-58 | -1.69E-46 |
| MS.gene061006 | MS.gene89605 | 0.821321 | 4.30E-53 | -1.69E-46 |
| MS.gene061100 | MS.gene89605 | 0.860019 | 2.76E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89605.t1 | MTR_8g076890 | 98.690 | 229 | 3 | 0 | 1 | 229 | 64 | 292 | 1.92e-167 | 463 |
| MS.gene89605.t1 | MTR_1g106955 | 39.247 | 186 | 111 | 2 | 42 | 226 | 25 | 209 | 6.53e-41 | 139 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene89605.t1 | AT5G66410 | 76.957 | 230 | 52 | 1 | 1 | 229 | 1 | 230 | 3.13e-124 | 351 |
| MS.gene89605.t1 | AT3G50960 | 76.087 | 230 | 54 | 1 | 1 | 229 | 1 | 230 | 6.57e-122 | 345 |
| MS.gene89605.t1 | AT3G50960 | 76.087 | 230 | 54 | 1 | 1 | 229 | 1 | 230 | 6.57e-122 | 345 |
| MS.gene89605.t1 | AT3G25580 | 37.745 | 204 | 123 | 4 | 27 | 229 | 10 | 210 | 9.63e-42 | 141 |
| MS.gene89605.t1 | AT2G18990 | 37.255 | 204 | 125 | 3 | 27 | 229 | 10 | 211 | 9.91e-42 | 141 |
| MS.gene89605.t1 | AT3G25580 | 37.745 | 204 | 123 | 4 | 27 | 229 | 5 | 205 | 1.00e-41 | 141 |
Find 43 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCGTTCTTTGTTGCAAAAT+TGG | 0.230492 | 8.3:+27272069 | MS.gene89605:CDS |
| AATATATGCTTTCAGGATAA+TGG | 0.300467 | 8.3:+27271833 | MS.gene89605:intron |
| TGCCTTGTGTCATACTGTTC+AGG | 0.310619 | 8.3:+27272104 | MS.gene89605:CDS |
| TTGGTAGGGTTTCAAGATCT+TGG | 0.323322 | 8.3:+27272429 | MS.gene89605:CDS |
| ATCAATATGCTTTGTTGAAA+GGG | 0.348912 | 8.3:-27271871 | None:intergenic |
| GGTAACTGAAGGGGATTTCT+TGG | 0.349950 | 8.3:+27271652 | MS.gene89605:CDS |
| TACGTTTCCAAATGCTAGAT+TGG | 0.366708 | 8.3:-27268386 | None:intergenic |
| AGAGTGGACTTTACAGCATC+TGG | 0.369772 | 8.3:-27268361 | None:intergenic |
| GTTGCAGTAGATAGATTGGT+AGG | 0.401977 | 8.3:+27272414 | MS.gene89605:CDS |
| ACTCTCACCAATCTAGCATT+TGG | 0.414503 | 8.3:+27268379 | MS.gene89605:CDS |
| GATTTCTTGGGTGAAGTCAC+TGG | 0.418247 | 8.3:+27271665 | MS.gene89605:CDS |
| ATAGAGAGAAGCAGAGAAAC+GGG | 0.422467 | 8.3:+27271592 | MS.gene89605:intron |
| GATTTGTCATTTCTATCATA+AGG | 0.426365 | 8.3:+27271700 | MS.gene89605:CDS |
| GGTTGACCTTGATGATTTGA+TGG | 0.431419 | 8.3:+27268840 | MS.gene89605:CDS |
| ACGTAAATCCGTTAGATCTT+CGG | 0.443057 | 8.3:+27272640 | MS.gene89605:CDS |
| TATCAATATGCTTTGTTGAA+AGG | 0.446459 | 8.3:-27271872 | None:intergenic |
| AGGAGTTGCAGTAGATAGAT+TGG | 0.446681 | 8.3:+27272410 | MS.gene89605:CDS |
| CAGAACCTCCAGTGCTCTTG+TGG | 0.459386 | 8.3:-27272469 | None:intergenic |
| GTAACTGAAGGGGATTTCTT+GGG | 0.475841 | 8.3:+27271653 | MS.gene89605:CDS |
| AAGCAGAGAAACGGGAGGCA+TGG | 0.484264 | 8.3:+27271600 | MS.gene89605:CDS |
| GTGATGTCAGGATCCTGAAT+TGG | 0.484812 | 8.3:+27271243 | MS.gene89605:intron |
| TATAGAGAGAAGCAGAGAAA+CGG | 0.485061 | 8.3:+27271591 | MS.gene89605:intron |
| ATATTGATACAAAGTTCATC+AGG | 0.487438 | 8.3:+27271886 | MS.gene89605:CDS |
| AGCTGCTCGTAATTATCAAA+AGG | 0.494712 | 8.3:+27268417 | MS.gene89605:CDS |
| TTGCAGTAGATAGATTGGTA+GGG | 0.514893 | 8.3:+27272415 | MS.gene89605:CDS |
| GGAATTGCTTAGTGAAGAGA+AGG | 0.536456 | 8.3:+27268789 | MS.gene89605:intron |
| GAGGTTCTGCTGATAAAGAA+AGG | 0.554204 | 8.3:+27272483 | MS.gene89605:CDS |
| GTTCATCAGGCTTGATGCAG+AGG | 0.554580 | 8.3:+27271899 | MS.gene89605:CDS |
| CGGGAGGCATGGAAGAAGAA+AGG | 0.566753 | 8.3:+27271611 | MS.gene89605:CDS |
| AGCAGCCGCCGAAGATCTAA+CGG | 0.584367 | 8.3:-27272648 | None:intergenic |
| AATTTAGAGAGGTAACTGAA+GGG | 0.589625 | 8.3:+27271642 | MS.gene89605:CDS |
| AAATGCTAGATTGGTGAGAG+TGG | 0.590363 | 8.3:-27268377 | None:intergenic |
| GAATTTAGAGAGGTAACTGA+AGG | 0.591103 | 8.3:+27271641 | MS.gene89605:CDS |
| AGGTCATGGTGAATTTAGAG+AGG | 0.594615 | 8.3:+27271631 | MS.gene89605:CDS |
| ATACATCCATCAAATCATCA+AGG | 0.601675 | 8.3:-27268846 | None:intergenic |
| ATTTAGAGAGGTAACTGAAG+GGG | 0.604140 | 8.3:+27271643 | MS.gene89605:CDS |
| GCATGGAAGAAGAAAGGTCA+TGG | 0.607111 | 8.3:+27271617 | MS.gene89605:CDS |
| GTAAAAGGGCATACTTGCAT+CGG | 0.607611 | 8.3:-27271730 | None:intergenic |
| CACCTGAACAGTATGACACA+AGG | 0.641883 | 8.3:-27272106 | None:intergenic |
| TAAATCCGTTAGATCTTCGG+CGG | 0.680937 | 8.3:+27272643 | MS.gene89605:CDS |
| GAGAGAAGCAGAGAAACGGG+AGG | 0.684731 | 8.3:+27271595 | MS.gene89605:intron |
| ATCGAGTTCTGTAAACGAGG+AGG | 0.703414 | 8.3:+27268819 | MS.gene89605:CDS |
| ACAATCGAGTTCTGTAAACG+AGG | 0.709233 | 8.3:+27268816 | MS.gene89605:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATACAATATACAATATATA+AGG | - | chr8.3:27271137-27271156 | None:intergenic | 10.0% |
| !! | TATATCAATTTAATTAACTA+GGG | + | chr8.3:27272369-27272388 | MS.gene89605:intron | 10.0% |
| !! | TTATATCAATTTAATTAACT+AGG | + | chr8.3:27272368-27272387 | MS.gene89605:intron | 10.0% |
| !! | TTTATAATTGAATTCTAATT+AGG | + | chr8.3:27269264-27269283 | MS.gene89605:intron | 10.0% |
| !!! | AGAAAAAGAAAATTTTATAT+TGG | + | chr8.3:27271455-27271474 | MS.gene89605:intron | 10.0% |
| !!! | TTCTTTTGATAAATTTTTTA+CGG | + | chr8.3:27270898-27270917 | MS.gene89605:intron | 10.0% |
| !!! | TTTTCTTCTATTTAATTTTT+TGG | + | chr8.3:27269627-27269646 | MS.gene89605:intron | 10.0% |
| !! | AATAGAAACAAATATTAGAT+GGG | + | chr8.3:27269835-27269854 | MS.gene89605:intron | 15.0% |
| !! | ACTACATAAAATAATAAACA+AGG | - | chr8.3:27268503-27268522 | None:intergenic | 15.0% |
| !! | GTAAAAAATTTATCAAAAGA+AGG | - | chr8.3:27270899-27270918 | None:intergenic | 15.0% |
| !!! | AGATATCATTTTTATTTAGA+AGG | - | chr8.3:27272254-27272273 | None:intergenic | 15.0% |
| !!! | ATATCATTTTTATTTAGAAG+GGG | - | chr8.3:27272252-27272271 | None:intergenic | 15.0% |
| !!! | GATATCATTTTTATTTAGAA+GGG | - | chr8.3:27272253-27272272 | None:intergenic | 15.0% |
| !!! | TCTTTTGATAAATTTTTTAC+GGG | + | chr8.3:27270899-27270918 | MS.gene89605:intron | 15.0% |
| !! | AAACCTTAAATCAGAATAAT+GGG | - | chr8.3:27271213-27271232 | None:intergenic | 20.0% |
| !! | AAATATAATCATGAATAACG+AGG | - | chr8.3:27271384-27271403 | None:intergenic | 20.0% |
| !! | ACATATGATTGTTAACAAAA+AGG | + | chr8.3:27268944-27268963 | MS.gene89605:intron | 20.0% |
| !! | ACATTTGCATTAAAATCATA+TGG | - | chr8.3:27271995-27272014 | None:intergenic | 20.0% |
| !! | ATTCAATGAACAATAGTAAA+AGG | - | chr8.3:27271748-27271767 | None:intergenic | 20.0% |
| !! | CAAAAATAAATGTGAAAGAT+TGG | + | chr8.3:27270406-27270425 | MS.gene89605:intron | 20.0% |
| !! | CTAATATAGTATGAATATCT+TGG | - | chr8.3:27271524-27271543 | None:intergenic | 20.0% |
| !! | GAAGATTAAATATTCTCTTT+AGG | - | chr8.3:27272221-27272240 | None:intergenic | 20.0% |
| !! | GAATAGAAACAAATATTAGA+TGG | + | chr8.3:27269834-27269853 | MS.gene89605:intron | 20.0% |
| !! | TAAACCTTAAATCAGAATAA+TGG | - | chr8.3:27271214-27271233 | None:intergenic | 20.0% |
| !! | TCTATTCATAAGTTAAGATA+AGG | - | chr8.3:27269821-27269840 | None:intergenic | 20.0% |
| !! | TTATAAATTCAGCAGTTAAT+AGG | - | chr8.3:27269251-27269270 | None:intergenic | 20.0% |
| !! | TTCAATGAACAATAGTAAAA+GGG | - | chr8.3:27271747-27271766 | None:intergenic | 20.0% |
| !!! | AATTCATACCTTTTCATAAT+TGG | + | chr8.3:27268467-27268486 | MS.gene89605:intron | 20.0% |
| !!! | ATTCATACCTTTTCATAATT+GGG | + | chr8.3:27268468-27268487 | MS.gene89605:intron | 20.0% |
| !!! | ATTTTGTTGTATTTTCAACT+GGG | + | chr8.3:27270873-27270892 | MS.gene89605:intron | 20.0% |
| !!! | CTTTTACTTCTTGAATTTTT+CGG | + | chr8.3:27272140-27272159 | MS.gene89605:intron | 20.0% |
| !!! | TATTTTGTTGTATTTTCAAC+TGG | + | chr8.3:27270872-27270891 | MS.gene89605:intron | 20.0% |
| !!! | TCAGATTTAACATATTTTCT+AGG | - | chr8.3:27269947-27269966 | None:intergenic | 20.0% |
| !!! | TTATTTTTGTTTATTCTCAC+AGG | - | chr8.3:27270395-27270414 | None:intergenic | 20.0% |
| !!! | TTGCTTCATTTTTTTTCATA+AGG | + | chr8.3:27269900-27269919 | MS.gene89605:intron | 20.0% |
| !!! | TTTATGTGAGTGTTATTTTA+TGG | + | chr8.3:27270978-27270997 | MS.gene89605:intron | 20.0% |
| ! | AAACTTTCAGTTTGCAATTA+AGG | - | chr8.3:27270142-27270161 | None:intergenic | 25.0% |
| ! | AAATAACACTCACATAAAAC+AGG | - | chr8.3:27270976-27270995 | None:intergenic | 25.0% |
| ! | AATATATGCTTTCAGGATAA+TGG | + | chr8.3:27271833-27271852 | MS.gene89605:intron | 25.0% |
| ! | AATTTGACCCAATTATGAAA+AGG | - | chr8.3:27268478-27268497 | None:intergenic | 25.0% |
| ! | AGGATTAATTAACTAGACAT+GGG | - | chr8.3:27269927-27269946 | None:intergenic | 25.0% |
| ! | ATACCCATTATTCTGATTTA+AGG | + | chr8.3:27271207-27271226 | MS.gene89605:intron | 25.0% |
| ! | ATATTGATACAAAGTTCATC+AGG | + | chr8.3:27271886-27271905 | MS.gene89605:CDS | 25.0% |
| ! | ATGATAGTCTATTCATTCTT+CGG | + | chr8.3:27269665-27269684 | MS.gene89605:intron | 25.0% |
| ! | ATTGACACTTGCATATATAA+AGG | - | chr8.3:27269087-27269106 | None:intergenic | 25.0% |
| ! | CAAAACAAAGTAAAGCAAAT+GGG | - | chr8.3:27269400-27269419 | None:intergenic | 25.0% |
| ! | CATATATTGATACAACACAA+AGG | - | chr8.3:27271821-27271840 | None:intergenic | 25.0% |
| ! | GCATAATCTATGATATTAGT+TGG | + | chr8.3:27269534-27269553 | MS.gene89605:intron | 25.0% |
| ! | TAGGATTAATTAACTAGACA+TGG | - | chr8.3:27269928-27269947 | None:intergenic | 25.0% |
| ! | TTATATATGCAAGTGTCAAT+TGG | + | chr8.3:27269087-27269106 | MS.gene89605:intron | 25.0% |
| ! | TTGTATCAATATATGCTTTC+AGG | + | chr8.3:27271826-27271845 | MS.gene89605:intron | 25.0% |
| !! | AAAACGCTACTTGTTAAATA+AGG | + | chr8.3:27272331-27272350 | MS.gene89605:intron | 25.0% |
| !! | ACAATATATAAGGCATTCTT+GGG | - | chr8.3:27271127-27271146 | None:intergenic | 25.0% |
| !! | ATCAATATGCTTTGTTGAAA+GGG | - | chr8.3:27271874-27271893 | None:intergenic | 25.0% |
| !! | ATGGATTTGATAACTTCAAT+TGG | + | chr8.3:27269748-27269767 | MS.gene89605:intron | 25.0% |
| !! | CAAGGAAATTCAAATACTTT+TGG | + | chr8.3:27269169-27269188 | MS.gene89605:intron | 25.0% |
| !! | CGAGGTATTCTATATATAAA+AGG | - | chr8.3:27271366-27271385 | None:intergenic | 25.0% |
| !! | GATTTGTCATTTCTATCATA+AGG | + | chr8.3:27271700-27271719 | MS.gene89605:CDS | 25.0% |
| !! | TACAATATATAAGGCATTCT+TGG | - | chr8.3:27271128-27271147 | None:intergenic | 25.0% |
| !! | TATCAATATGCTTTGTTGAA+AGG | - | chr8.3:27271875-27271894 | None:intergenic | 25.0% |
| !!! | GAAAGTTTAACTTGTAAATG+TGG | + | chr8.3:27270154-27270173 | MS.gene89605:intron | 25.0% |
| !!! | TGAGTGTTATTTTATGGAAA+AGG | + | chr8.3:27270984-27271003 | MS.gene89605:intron | 25.0% |
| !!! | TGAGTGTTATTTTATGGAAA+TGG | + | chr8.3:27270984-27271003 | MS.gene89605:intron | 25.0% |
| !!! | TTTGCATGAGTGTTATTTTA+TGG | + | chr8.3:27271029-27271048 | MS.gene89605:intron | 25.0% |
| AAAATACTAGAAGGTCTCAT+TGG | + | chr8.3:27269117-27269136 | MS.gene89605:intron | 30.0% | |
| AAGTCTAAAAAACAGATGAG+TGG | + | chr8.3:27272185-27272204 | MS.gene89605:intron | 30.0% | |
| AATTTAGAGAGGTAACTGAA+GGG | + | chr8.3:27271642-27271661 | MS.gene89605:CDS | 30.0% | |
| ACCTGTTATATGATTTCTGT+AGG | + | chr8.3:27268768-27268787 | MS.gene89605:intron | 30.0% | |
| ACGAAGATTTGTGATGAAAT+GGG | + | chr8.3:27269980-27269999 | MS.gene89605:intron | 30.0% | |
| AGAAATACACGCTGAAATAT+GGG | - | chr8.3:27270572-27270591 | None:intergenic | 30.0% | |
| AGACACACTAACAAATGAAA+CGG | - | chr8.3:27272533-27272552 | None:intergenic | 30.0% | |
| ATACATCCATCAAATCATCA+AGG | - | chr8.3:27268849-27268868 | None:intergenic | 30.0% | |
| ATGTATGTGTGCTAGTATTT+AGG | + | chr8.3:27268898-27268917 | MS.gene89605:intron | 30.0% | |
| CAAACAAATTCCAAGAAACA+TGG | - | chr8.3:27269221-27269240 | None:intergenic | 30.0% | |
| CAGAAACAGTCAAAATTGAA+AGG | + | chr8.3:27270205-27270224 | MS.gene89605:intron | 30.0% | |
| CTAAATACAGACTATGATAG+AGG | + | chr8.3:27269048-27269067 | MS.gene89605:intron | 30.0% | |
| CTATGCATTTAGTGATGATA+TGG | + | chr8.3:27269729-27269748 | MS.gene89605:intron | 30.0% | |
| GAAACAAATATTAGATGGGT+CGG | + | chr8.3:27269839-27269858 | MS.gene89605:intron | 30.0% | |
| GAACAGAAACATCACAAAAA+AGG | + | chr8.3:27270343-27270362 | MS.gene89605:intron | 30.0% | |
| GAATTATTATGCATTGTGTG+TGG | + | chr8.3:27270691-27270710 | MS.gene89605:intron | 30.0% | |
| GCAAAACAAAGTAAAGCAAA+TGG | - | chr8.3:27269401-27269420 | None:intergenic | 30.0% | |
| GTGAATGAATGTCTTTCTTA+TGG | + | chr8.3:27270265-27270284 | MS.gene89605:intron | 30.0% | |
| TAAATTCAGCAGTTAATAGG+TGG | - | chr8.3:27269248-27269267 | None:intergenic | 30.0% | |
| TACGAAGATTTGTGATGAAA+TGG | + | chr8.3:27269979-27269998 | MS.gene89605:intron | 30.0% | |
| TAGAAATACACGCTGAAATA+TGG | - | chr8.3:27270573-27270592 | None:intergenic | 30.0% | |
| TATACCTCACGAAAATACAT+AGG | - | chr8.3:27268925-27268944 | None:intergenic | 30.0% | |
| TCACCATTACAGAAAGATTT+GGG | + | chr8.3:27270613-27270632 | MS.gene89605:intron | 30.0% | |
| TCCTACAGAAATCATATAAC+AGG | - | chr8.3:27268772-27268791 | None:intergenic | 30.0% | |
| TGATAGTCTATTCATTCTTC+GGG | + | chr8.3:27269666-27269685 | MS.gene89605:intron | 30.0% | |
| TGCAATTAAGGTGATTTCAA+TGG | - | chr8.3:27270130-27270149 | None:intergenic | 30.0% | |
| TTATGTACAATTGTGATGTC+AGG | + | chr8.3:27271231-27271250 | MS.gene89605:intron | 30.0% | |
| TTCACCATTACAGAAAGATT+TGG | + | chr8.3:27270612-27270631 | MS.gene89605:intron | 30.0% | |
| ! | AATTGTTACTTCACATGTCA+AGG | - | chr8.3:27271789-27271808 | None:intergenic | 30.0% |
| ! | ATTGTTACTTCACATGTCAA+GGG | - | chr8.3:27271788-27271807 | None:intergenic | 30.0% |
| ! | GTGTATTTCTACTTAGATGT+AGG | + | chr8.3:27270582-27270601 | MS.gene89605:intron | 30.0% |
| ! | TTTGATACGTTTTCTTTGCA+AGG | + | chr8.3:27269151-27269170 | MS.gene89605:intron | 30.0% |
| !! | AGTTTAACTTGTAAATGTGG+CGG | + | chr8.3:27270157-27270176 | MS.gene89605:intron | 30.0% |
| !! | TTTTTGTTTATTCTCACAGG+AGG | - | chr8.3:27270392-27270411 | None:intergenic | 30.0% |
| !!! | ATTTTGACTGTTTCTGCTAA+CGG | - | chr8.3:27270201-27270220 | None:intergenic | 30.0% |
| !!! | TTCATCCACATCTTTTTTCT+CGG | - | chr8.3:27272594-27272613 | None:intergenic | 30.0% |
| !!! | TTTTTTAACTGCCATTTGAC+AGG | + | chr8.3:27272560-27272579 | MS.gene89605:intron | 30.0% |
| AAAGAAAAATTAGTGCCCCT+GGG | - | chr8.3:27271563-27271582 | None:intergenic | 35.0% | |
| AAAGGTCAGATGTGTAAAAG+TGG | - | chr8.3:27269495-27269514 | None:intergenic | 35.0% | |
| AAAGTGATTCAAGACTTCCA+AGG | - | chr8.3:27269453-27269472 | None:intergenic | 35.0% | |
| ACCATGCCTATATAAGTTAG+AGG | - | chr8.3:27269309-27269328 | None:intergenic | 35.0% | |
| ACCGTTCTTTGTTGCAAAAT+TGG | + | chr8.3:27272069-27272088 | MS.gene89605:CDS | 35.0% | |
| ACCTCTAACTTATATAGGCA+TGG | + | chr8.3:27269305-27269324 | MS.gene89605:intron | 35.0% | |
| ACGTAAATCCGTTAGATCTT+CGG | + | chr8.3:27272640-27272659 | MS.gene89605:CDS | 35.0% | |
| AGAATTTCCCAACAAGACAA+AGG | - | chr8.3:27269783-27269802 | None:intergenic | 35.0% | |
| AGCTGCTCGTAATTATCAAA+AGG | + | chr8.3:27268417-27268436 | MS.gene89605:CDS | 35.0% | |
| ATACAGACTATGATAGAGGA+AGG | + | chr8.3:27269052-27269071 | MS.gene89605:intron | 35.0% | |
| ATGATGCATCCTTGTATGTA+TGG | - | chr8.3:27271314-27271333 | None:intergenic | 35.0% | |
| ATGCCTATATAAGTTAGAGG+TGG | - | chr8.3:27269306-27269325 | None:intergenic | 35.0% | |
| ATGTCTTTCTTATGGAAGCA+TGG | + | chr8.3:27270273-27270292 | MS.gene89605:intron | 35.0% | |
| ATTAATTGCCTGCACACAAA+AGG | - | chr8.3:27269513-27269532 | None:intergenic | 35.0% | |
| ATTTAGAGAGGTAACTGAAG+GGG | + | chr8.3:27271643-27271662 | MS.gene89605:CDS | 35.0% | |
| CACTAACAAATGAAACGGAA+TGG | - | chr8.3:27272528-27272547 | None:intergenic | 35.0% | |
| CAGTAATCACAGATTGGAAA+AGG | - | chr8.3:27269591-27269610 | None:intergenic | 35.0% | |
| CTGTGATTGACAACATTGAT+TGG | + | chr8.3:27268669-27268688 | MS.gene89605:intron | 35.0% | |
| CTTCCACCTCTAACTTATAT+AGG | + | chr8.3:27269300-27269319 | MS.gene89605:intron | 35.0% | |
| GAATTTAGAGAGGTAACTGA+AGG | + | chr8.3:27271641-27271660 | MS.gene89605:CDS | 35.0% | |
| GATAGTCTATTCATTCTTCG+GGG | + | chr8.3:27269667-27269686 | MS.gene89605:intron | 35.0% | |
| GGTTGACTGAAAATACTAGA+AGG | + | chr8.3:27269108-27269127 | MS.gene89605:intron | 35.0% | |
| TAACAAATGAAACGGAATGG+AGG | - | chr8.3:27272525-27272544 | None:intergenic | 35.0% | |
| TACAGAAAGATTTGGGAGAA+GGG | + | chr8.3:27270620-27270639 | MS.gene89605:intron | 35.0% | |
| TACGTTTCCAAATGCTAGAT+TGG | - | chr8.3:27268389-27268408 | None:intergenic | 35.0% | |
| TATAGAGAGAAGCAGAGAAA+CGG | + | chr8.3:27271591-27271610 | MS.gene89605:intron | 35.0% | |
| TATTGCCGAGAAAAAAGATG+TGG | + | chr8.3:27272586-27272605 | MS.gene89605:CDS | 35.0% | |
| TCTCCCAAATCTTTCTGTAA+TGG | - | chr8.3:27270619-27270638 | None:intergenic | 35.0% | |
| TTACAGAAAGATTTGGGAGA+AGG | + | chr8.3:27270619-27270638 | MS.gene89605:intron | 35.0% | |
| TTCAAACACATTAACGCGAA+GGG | - | chr8.3:27270241-27270260 | None:intergenic | 35.0% | |
| TTGCAGTAGATAGATTGGTA+GGG | + | chr8.3:27272415-27272434 | MS.gene89605:CDS | 35.0% | |
| TTTCAAACACATTAACGCGA+AGG | - | chr8.3:27270242-27270261 | None:intergenic | 35.0% | |
| ! | GCATGCAATTTTTCCAATTC+AGG | - | chr8.3:27271259-27271278 | None:intergenic | 35.0% |
| ! | GCCAATTTTGCAACAAAGAA+CGG | - | chr8.3:27272073-27272092 | None:intergenic | 35.0% |
| ! | GTTTCATTTGTTAGTGTGTC+TGG | + | chr8.3:27272532-27272551 | MS.gene89605:intron | 35.0% |
| ! | TAATTGTTGCTTCATGGTAG+TGG | + | chr8.3:27272292-27272311 | MS.gene89605:intron | 35.0% |
| ! | TGAAGCTAATTGTTGCTTCA+TGG | + | chr8.3:27272286-27272305 | MS.gene89605:intron | 35.0% |
| !! | AAGTAAAGCAAATGGGCTAT+CGG | - | chr8.3:27269393-27269412 | None:intergenic | 35.0% |
| !! | GTTTAACTTGTAAATGTGGC+GGG | + | chr8.3:27270158-27270177 | MS.gene89605:intron | 35.0% |
| !! | TATGATAGAGGAAGGTACTT+AGG | + | chr8.3:27269060-27269079 | MS.gene89605:intron | 35.0% |
| !! | TCAATGGATTATAGCTCTGT+GGG | - | chr8.3:27270114-27270133 | None:intergenic | 35.0% |
| !! | TTCAATGGATTATAGCTCTG+TGG | - | chr8.3:27270115-27270134 | None:intergenic | 35.0% |
| !!! | AGTAGCGTTTTATTTTAGCC+AGG | - | chr8.3:27272322-27272341 | None:intergenic | 35.0% |
| !!! | GGTGTTTCTTTTTTCAGACA+AGG | + | chr8.3:27272390-27272409 | MS.gene89605:intron | 35.0% |
| !!! | TTTTGACTGTTTCTGCTAAC+GGG | - | chr8.3:27270200-27270219 | None:intergenic | 35.0% |
| AAACAGACTTTAGCGCTATC+TGG | - | chr8.3:27271011-27271030 | None:intergenic | 40.0% | |
| AAATGCTAGATTGGTGAGAG+TGG | - | chr8.3:27268380-27268399 | None:intergenic | 40.0% | |
| AACAGACTTTAGCGCTATCT+GGG | - | chr8.3:27271010-27271029 | None:intergenic | 40.0% | |
| AAGAAAAATTAGTGCCCCTG+GGG | - | chr8.3:27271562-27271581 | None:intergenic | 40.0% | |
| ACAATCGAGTTCTGTAAACG+AGG | + | chr8.3:27268816-27268835 | MS.gene89605:CDS | 40.0% | |
| ACGATTCCCTTTGTAGTCAA+CGG | - | chr8.3:27269359-27269378 | None:intergenic | 40.0% | |
| ACTCTCACCAATCTAGCATT+TGG | + | chr8.3:27268379-27268398 | MS.gene89605:CDS | 40.0% | |
| AGGAGTTGCAGTAGATAGAT+TGG | + | chr8.3:27272410-27272429 | MS.gene89605:CDS | 40.0% | |
| AGGTCATGGTGAATTTAGAG+AGG | + | chr8.3:27271631-27271650 | MS.gene89605:CDS | 40.0% | |
| ATAGAGAGAAGCAGAGAAAC+GGG | + | chr8.3:27271592-27271611 | MS.gene89605:intron | 40.0% | |
| ATGCATCCTTGTATGTATGG+AGG | - | chr8.3:27271311-27271330 | None:intergenic | 40.0% | |
| CAAAGAAAAATTAGTGCCCC+TGG | - | chr8.3:27271564-27271583 | None:intergenic | 40.0% | |
| CACTCACATAAAACAGGCTT+TGG | - | chr8.3:27270970-27270989 | None:intergenic | 40.0% | |
| CGGCAATAATACCTGTCAAA+TGG | - | chr8.3:27272574-27272593 | None:intergenic | 40.0% | |
| CTTCAGAAGACCATGTTTCT+TGG | + | chr8.3:27269208-27269227 | MS.gene89605:intron | 40.0% | |
| GAGGTTCTGCTGATAAAGAA+AGG | + | chr8.3:27272483-27272502 | MS.gene89605:CDS | 40.0% | |
| GCAACACGCTGAAAAATGAA+AGG | + | chr8.3:27270544-27270563 | MS.gene89605:intron | 40.0% | |
| GGAATTGCTTAGTGAAGAGA+AGG | + | chr8.3:27268789-27268808 | MS.gene89605:intron | 40.0% | |
| GTAAAAGTGGCTTATGATGC+AGG | - | chr8.3:27269482-27269501 | None:intergenic | 40.0% | |
| GTAACTGAAGGGGATTTCTT+GGG | + | chr8.3:27271653-27271672 | MS.gene89605:CDS | 40.0% | |
| GTTGCAGTAGATAGATTGGT+AGG | + | chr8.3:27272414-27272433 | MS.gene89605:CDS | 40.0% | |
| TAAATCCGTTAGATCTTCGG+CGG | + | chr8.3:27272643-27272662 | MS.gene89605:CDS | 40.0% | |
| TACACAGATCTCTTGCAGAA+AGG | - | chr8.3:27270484-27270503 | None:intergenic | 40.0% | |
| TAGTGACCTCCATACATACA+AGG | + | chr8.3:27271302-27271321 | MS.gene89605:intron | 40.0% | |
| TCACAGATCGCAGAAAATAG+TGG | - | chr8.3:27268655-27268674 | None:intergenic | 40.0% | |
| TGGAAAAATTGCATGCAGAC+AGG | + | chr8.3:27271263-27271282 | MS.gene89605:CDS | 40.0% | |
| TTACTTCACATGTCAAGGGA+TGG | - | chr8.3:27271784-27271803 | None:intergenic | 40.0% | |
| TTGGTAGGGTTTCAAGATCT+TGG | + | chr8.3:27272429-27272448 | MS.gene89605:CDS | 40.0% | |
| TTTCCTTAACTAATGCCCCA+GGG | + | chr8.3:27271544-27271563 | MS.gene89605:intron | 40.0% | |
| ! | AGACAGGATTGCAGCTTTTA+AGG | + | chr8.3:27271279-27271298 | MS.gene89605:CDS | 40.0% |
| ! | AGGACCTATGTATTTTCGTG+AGG | + | chr8.3:27268918-27268937 | MS.gene89605:intron | 40.0% |
| ! | CAGTTCTCCTTTGTCTTGTT+GGG | + | chr8.3:27269773-27269792 | MS.gene89605:intron | 40.0% |
| ! | GAAACATGGTCTTCTGAAGA+AGG | - | chr8.3:27269207-27269226 | None:intergenic | 40.0% |
| ! | GAAGTGTTTGACAGGAAGAT+GGG | - | chr8.3:27270301-27270320 | None:intergenic | 40.0% |
| ! | GGTTGACCTTGATGATTTGA+TGG | + | chr8.3:27268840-27268859 | MS.gene89605:CDS | 40.0% |
| ! | GTAAAAGGGCATACTTGCAT+CGG | - | chr8.3:27271733-27271752 | None:intergenic | 40.0% |
| ! | TAATGAGTATCGCGGAACAA+TGG | - | chr8.3:27268603-27268622 | None:intergenic | 40.0% |
| ! | TACAACGCTAATGAGTATCG+CGG | - | chr8.3:27268611-27268630 | None:intergenic | 40.0% |
| ! | TTTGGAGTGTGTTTCTCTCA+AGG | + | chr8.3:27270774-27270793 | MS.gene89605:intron | 40.0% |
| ! | TTTGTGTAGAGAGGTGTATG+TGG | + | chr8.3:27270664-27270683 | MS.gene89605:intron | 40.0% |
| ! | TTTTCTTAACTAGTGCCCCA+GGG | - | chr8.3:27271436-27271455 | None:intergenic | 40.0% |
| !! | AGAAGTGTTTGACAGGAAGA+TGG | - | chr8.3:27270302-27270321 | None:intergenic | 40.0% |
| !! | GAGATTGAGAAGTGTTTGAC+AGG | - | chr8.3:27270309-27270328 | None:intergenic | 40.0% |
| !! | TTTGACTGTTTCTGCTAACG+GGG | - | chr8.3:27270199-27270218 | None:intergenic | 40.0% |
| AAATGCCAGCTACTTGCCTT+TGG | + | chr8.3:27270927-27270946 | MS.gene89605:intron | 45.0% | |
| AGCCATGTGTTTGTGTAGAG+AGG | + | chr8.3:27270655-27270674 | MS.gene89605:intron | 45.0% | |
| AGTCAACGGCACAAGTAATG+TGG | - | chr8.3:27269345-27269364 | None:intergenic | 45.0% | |
| ATCGAGTTCTGTAAACGAGG+AGG | + | chr8.3:27268819-27268838 | MS.gene89605:CDS | 45.0% | |
| ATTAGATGGGTCGGCATGTA+AGG | + | chr8.3:27269848-27269867 | MS.gene89605:intron | 45.0% | |
| CAACTAGAGCAGCTGATGAA+TGG | - | chr8.3:27270046-27270065 | None:intergenic | 45.0% | |
| CACCTCTCTACACAAACACA+TGG | - | chr8.3:27270660-27270679 | None:intergenic | 45.0% | |
| CACCTGAACAGTATGACACA+AGG | - | chr8.3:27272109-27272128 | None:intergenic | 45.0% | |
| CAGCTACTTGCCTTTGGTAA+AGG | + | chr8.3:27270933-27270952 | MS.gene89605:intron | 45.0% | |
| CATCAGCTGCTCTAGTTGAT+GGG | + | chr8.3:27270048-27270067 | MS.gene89605:intron | 45.0% | |
| CCAACAAGACAAAGGAGAAC+TGG | - | chr8.3:27269775-27269794 | None:intergenic | 45.0% | |
| CCAGTTCTCCTTTGTCTTGT+TGG | + | chr8.3:27269772-27269791 | MS.gene89605:intron | 45.0% | |
| CTTTACCAAAGGCAAGTAGC+TGG | - | chr8.3:27270935-27270954 | None:intergenic | 45.0% | |
| GATTTCTTGGGTGAAGTCAC+TGG | + | chr8.3:27271665-27271684 | MS.gene89605:CDS | 45.0% | |
| GCACTGCAGTAATCACAGAT+TGG | - | chr8.3:27269597-27269616 | None:intergenic | 45.0% | |
| GCATGGAAGAAGAAAGGTCA+TGG | + | chr8.3:27271617-27271636 | MS.gene89605:CDS | 45.0% | |
| GGTAACTGAAGGGGATTTCT+TGG | + | chr8.3:27271652-27271671 | MS.gene89605:CDS | 45.0% | |
| GTGATGTCAGGATCCTGAAT+TGG | + | chr8.3:27271243-27271262 | MS.gene89605:intron | 45.0% | |
| GTTTCCTTAACTAATGCCCC+AGG | + | chr8.3:27271543-27271562 | MS.gene89605:intron | 45.0% | |
| TATTGCTAACTAGTGCCCCT+GGG | + | chr8.3:27271417-27271436 | MS.gene89605:intron | 45.0% | |
| TCATCAGCTGCTCTAGTTGA+TGG | + | chr8.3:27270047-27270066 | MS.gene89605:intron | 45.0% | |
| TGCCTTGTGTCATACTGTTC+AGG | + | chr8.3:27272104-27272123 | MS.gene89605:CDS | 45.0% | |
| TGCCTTTCTGTAGACAGAAC+AGG | + | chr8.3:27270507-27270526 | MS.gene89605:intron | 45.0% | |
| TGCTAACGGGGATTGTTACA+GGG | - | chr8.3:27270187-27270206 | None:intergenic | 45.0% | |
| TGTGTCATACTGTTCAGGTG+AGG | + | chr8.3:27272109-27272128 | MS.gene89605:intron | 45.0% | |
| TTAGATGGGTCGGCATGTAA+GGG | + | chr8.3:27269849-27269868 | MS.gene89605:intron | 45.0% | |
| TTCATTCTTCGGGGAGTAGT+AGG | + | chr8.3:27269676-27269695 | MS.gene89605:intron | 45.0% | |
| TTCCTTAACTAATGCCCCAG+GGG | + | chr8.3:27271545-27271564 | MS.gene89605:intron | 45.0% | |
| TTTCTTAACTAGTGCCCCAG+GGG | - | chr8.3:27271435-27271454 | None:intergenic | 45.0% | |
| TTTGGGAGAAGGGAATACTC+TGG | + | chr8.3:27270630-27270649 | MS.gene89605:intron | 45.0% | |
| ! | ACATCTGACCTTTTGTGTGC+AGG | + | chr8.3:27269502-27269521 | MS.gene89605:intron | 45.0% |
| ! | ACTTGTGCCGTTGACTACAA+AGG | + | chr8.3:27269349-27269368 | MS.gene89605:intron | 45.0% |
| ! | AGACTTCCAAGGAAGTGTAC+AGG | - | chr8.3:27269442-27269461 | None:intergenic | 45.0% |
| ! | AGAGTGGACTTTACAGCATC+TGG | - | chr8.3:27268364-27268383 | None:intergenic | 45.0% |
| ! | ATAGCTCTGTGGGTCACAAA+AGG | - | chr8.3:27270104-27270123 | None:intergenic | 45.0% |
| ! | CTTGTGCCGTTGACTACAAA+GGG | + | chr8.3:27269350-27269369 | MS.gene89605:intron | 45.0% |
| ! | CTTTTCTTAACTAGTGCCCC+AGG | - | chr8.3:27271437-27271456 | None:intergenic | 45.0% |
| !! | CGATTTTTCCACAAGAGCAC+TGG | + | chr8.3:27272461-27272480 | MS.gene89605:CDS | 45.0% |
| !! | GAGGTGGAAGCATTAGTTTG+TGG | - | chr8.3:27269290-27269309 | None:intergenic | 45.0% |
| !!! | TTTTTCCACAAGAGCACTGG+AGG | + | chr8.3:27272464-27272483 | MS.gene89605:CDS | 45.0% |
| ACTCTCCCCAGTGCCAATTT+CGG | + | chr8.3:27270808-27270827 | MS.gene89605:intron | 50.0% | |
| AGTGCACCGAAATTGGCACT+GGG | - | chr8.3:27270817-27270836 | None:intergenic | 50.0% | |
| ATTGCTAACTAGTGCCCCTG+GGG | + | chr8.3:27271418-27271437 | MS.gene89605:intron | 50.0% | |
| CCAAACCAGTGCACCGAAAT+TGG | - | chr8.3:27270824-27270843 | None:intergenic | 50.0% | |
| CTATTGCTAACTAGTGCCCC+TGG | + | chr8.3:27271416-27271435 | MS.gene89605:intron | 50.0% | |
| CTGCTAACGGGGATTGTTAC+AGG | - | chr8.3:27270188-27270207 | None:intergenic | 50.0% | |
| GCTATCTGGGCCTTTACCAA+AGG | - | chr8.3:27270946-27270965 | None:intergenic | 50.0% | |
| GGCCTGTTCTGTCTACAGAA+AGG | - | chr8.3:27270512-27270531 | None:intergenic | 50.0% | |
| GTCGGCATGTAAGGGTAGAT+AGG | + | chr8.3:27269857-27269876 | MS.gene89605:intron | 50.0% | |
| GTTCATCAGGCTTGATGCAG+AGG | + | chr8.3:27271899-27271918 | MS.gene89605:CDS | 50.0% | |
| TGAACTCACTTGAGCTAGCC+TGG | + | chr8.3:27270734-27270753 | MS.gene89605:intron | 50.0% | |
| TTGCAGCCTGTACACTTCCT+TGG | + | chr8.3:27269433-27269452 | MS.gene89605:intron | 50.0% | |
| ! | AAACAGGCTTTGGCGCTATC+TGG | - | chr8.3:27270960-27270979 | None:intergenic | 50.0% |
| ! | AACAGGCTTTGGCGCTATCT+GGG | - | chr8.3:27270959-27270978 | None:intergenic | 50.0% |
| ! | GCGTGTTGCTGCATTTCTTC+AGG | - | chr8.3:27270533-27270552 | None:intergenic | 50.0% |
| !! | CCAATTTCGGTGCACTGGTT+TGG | + | chr8.3:27270821-27270840 | MS.gene89605:intron | 50.0% |
| !! | CTTCATGGTAGTGGTTAGCC+TGG | + | chr8.3:27272301-27272320 | MS.gene89605:intron | 50.0% |
| !! | GTGGTGTTGGCTTAGGACTT+TGG | + | chr8.3:27270756-27270775 | MS.gene89605:intron | 50.0% |
| AAGCAGAGAAACGGGAGGCA+TGG | + | chr8.3:27271600-27271619 | MS.gene89605:CDS | 55.0% | |
| AGCAGCCGCCGAAGATCTAA+CGG | - | chr8.3:27272651-27272670 | None:intergenic | 55.0% | |
| AGTCCTAAGCCAACACCACC+AGG | - | chr8.3:27270755-27270774 | None:intergenic | 55.0% | |
| CAGAACCTCCAGTGCTCTTG+TGG | - | chr8.3:27272472-27272491 | None:intergenic | 55.0% | |
| CAGTGCACCGAAATTGGCAC+TGG | - | chr8.3:27270818-27270837 | None:intergenic | 55.0% | |
| GAGAGAAGCAGAGAAACGGG+AGG | + | chr8.3:27271595-27271614 | MS.gene89605:intron | 55.0% | |
| GTGCACCGAAATTGGCACTG+GGG | - | chr8.3:27270816-27270835 | None:intergenic | 55.0% | |
| ! | ACTCACTTGAGCTAGCCTGG+TGG | + | chr8.3:27270737-27270756 | MS.gene89605:intron | 55.0% |
| ! | CAGTGCCAATTTCGGTGCAC+TGG | + | chr8.3:27270816-27270835 | MS.gene89605:intron | 55.0% |
| ! | CGGGAGGCATGGAAGAAGAA+AGG | + | chr8.3:27271611-27271630 | MS.gene89605:CDS | 55.0% |
| ! | TGCCCCTGGGGCATTAGTTA+AGG | - | chr8.3:27271550-27271569 | None:intergenic | 55.0% |
| ! | TTGAGCTAGCCTGGTGGTGT+TGG | + | chr8.3:27270743-27270762 | MS.gene89605:intron | 55.0% |
| !! | TAGCCTGGTGGTGTTGGCTT+AGG | + | chr8.3:27270749-27270768 | MS.gene89605:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 27268355 | 27272688 | 27268355 | ID=MS.gene89605 |
| chr8.3 | mRNA | 27268355 | 27272688 | 27268355 | ID=MS.gene89605.t1;Parent=MS.gene89605 |
| chr8.3 | exon | 27268355 | 27268438 | 27268355 | ID=MS.gene89605.t1.exon1;Parent=MS.gene89605.t1 |
| chr8.3 | CDS | 27268355 | 27268438 | 27268355 | ID=cds.MS.gene89605.t1;Parent=MS.gene89605.t1 |
| chr8.3 | exon | 27268790 | 27268864 | 27268790 | ID=MS.gene89605.t1.exon2;Parent=MS.gene89605.t1 |
| chr8.3 | CDS | 27268790 | 27268864 | 27268790 | ID=cds.MS.gene89605.t1;Parent=MS.gene89605.t1 |
| chr8.3 | exon | 27271253 | 27271300 | 27271253 | ID=MS.gene89605.t1.exon3;Parent=MS.gene89605.t1 |
| chr8.3 | CDS | 27271253 | 27271300 | 27271253 | ID=cds.MS.gene89605.t1;Parent=MS.gene89605.t1 |
| chr8.3 | exon | 27271596 | 27271738 | 27271596 | ID=MS.gene89605.t1.exon4;Parent=MS.gene89605.t1 |
| chr8.3 | CDS | 27271596 | 27271738 | 27271596 | ID=cds.MS.gene89605.t1;Parent=MS.gene89605.t1 |
| chr8.3 | exon | 27271848 | 27271920 | 27271848 | ID=MS.gene89605.t1.exon5;Parent=MS.gene89605.t1 |
| chr8.3 | CDS | 27271848 | 27271920 | 27271848 | ID=cds.MS.gene89605.t1;Parent=MS.gene89605.t1 |
| chr8.3 | exon | 27272064 | 27272125 | 27272064 | ID=MS.gene89605.t1.exon6;Parent=MS.gene89605.t1 |
| chr8.3 | CDS | 27272064 | 27272125 | 27272064 | ID=cds.MS.gene89605.t1;Parent=MS.gene89605.t1 |
| chr8.3 | exon | 27272407 | 27272504 | 27272407 | ID=MS.gene89605.t1.exon7;Parent=MS.gene89605.t1 |
| chr8.3 | CDS | 27272407 | 27272504 | 27272407 | ID=cds.MS.gene89605.t1;Parent=MS.gene89605.t1 |
| chr8.3 | exon | 27272582 | 27272688 | 27272582 | ID=MS.gene89605.t1.exon8;Parent=MS.gene89605.t1 |
| chr8.3 | CDS | 27272582 | 27272688 | 27272582 | ID=cds.MS.gene89605.t1;Parent=MS.gene89605.t1 |
| Gene Sequence |
| Protein sequence |
