AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene94952


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94952.t1 MTR_3g059000 97.609 711 12 3 1 709 1 708 0.0 1359
MS.gene94952.t1 MTR_3g058990 71.469 715 141 13 1 709 1 658 0.0 722
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene94952.t1 AT5G55670 54.775 754 252 20 1 709 1 710 0.0 556
MS.gene94952.t1 AT5G55670 47.758 446 157 13 1 409 1 407 2.29e-84 278
MS.gene94952.t1 AT5G55670 59.794 194 51 4 531 709 404 585 2.54e-51 188
MS.gene94952.t1 AT1G13190 38.525 488 174 18 228 705 200 571 4.48e-64 223

Find 309 sgRNAs with CRISPR-Local

Find 340 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGATGAATCTAGGGTTTC+TGG 0.047637 3.1:-44600222 MS.gene94952:CDS
GTACCGGTGGTGGTGGAATT+AGG 0.159122 3.1:-44600152 MS.gene94952:CDS
TCATCACGATGCTTTCTTTC+TGG 0.166663 3.1:+44598686 None:intergenic
TGCTTTCTTTCTGGCCATTC+AGG 0.195629 3.1:+44598695 None:intergenic
CCACCCCATCCGCCCATATT+TGG 0.212636 3.1:+44598950 None:intergenic
ACCATTCATCCCTTCCTTAC+AGG 0.228120 3.1:+44599648 None:intergenic
ATGAATGGTCATTCGTTTAA+TGG 0.249585 3.1:-44599634 MS.gene94952:CDS
CTGTCAATCCGATGAGAAAT+AGG 0.252618 3.1:-44599324 MS.gene94952:CDS
GAATGATGGTGTTGGAGTTC+AGG 0.253174 3.1:-44600073 MS.gene94952:CDS
GTTGGTGGTGGAGGAGGTGG+TGG 0.255621 3.1:-44599847 MS.gene94952:CDS
GGGTATGGATGGTCCTAATA+TGG 0.258478 3.1:-44598987 MS.gene94952:CDS
GGTGTTGGTGGTGGAGGAGG+TGG 0.269109 3.1:-44599850 MS.gene94952:CDS
GTGAGGAACCTGGTGGTGGC+AGG 0.283008 3.1:-44598928 MS.gene94952:CDS
GGAGGTGTTGGTGGTGGAGG+AGG 0.283109 3.1:-44599853 MS.gene94952:CDS
AGGTCAAAAGATGCTGATTA+TGG 0.291684 3.1:-44598425 MS.gene94952:CDS
GAACCTGGTGGTGGCAGGGC+TGG 0.298264 3.1:-44598923 MS.gene94952:CDS
AATAATAACAATAGAGGTTA+TGG 0.305047 3.1:-44599397 MS.gene94952:CDS
TTCTGCCACCCAGCTCTATC+AGG 0.319704 3.1:+44598845 None:intergenic
AGGTTATGGAAGAGGTAATT+GGG 0.321683 3.1:-44599383 MS.gene94952:CDS
GTGGAGGGGTTAATCTTAAT+AGG 0.323062 3.1:-44599936 MS.gene94952:CDS
GAGGTTATGGAAGAGGTAAT+TGG 0.327457 3.1:-44599384 MS.gene94952:CDS
CCCTCAGCAAATTATGAATC+AGG 0.328490 3.1:-44599215 MS.gene94952:CDS
CTTAATAGGGTTGGAGGAAA+TGG 0.331429 3.1:-44599922 MS.gene94952:CDS
ATAGGTGGTAGAGGTATAAT+TGG 0.332537 3.1:-44599292 MS.gene94952:CDS
AGTGGTGTTGTTGGTGGTGG+AGG 0.332763 3.1:-44599952 MS.gene94952:CDS
AGGAAGTACTTTGTTATTTG+TGG 0.333873 3.1:-44599824 MS.gene94952:CDS
TCCGGCCACATTCCCATATT+AGG 0.337509 3.1:+44598974 None:intergenic
TGGGCGAGGCTCAGAATAAT+AGG 0.346521 3.1:-44599564 MS.gene94952:CDS
TGGTCCGGCACCTCCATTCT+CGG 0.347346 3.1:-44599131 MS.gene94952:CDS
AATGTGGCCGGATCCAAATA+TGG 0.348257 3.1:-44598963 MS.gene94952:CDS
TCAATCGGGTTCTGGTGTTC+AGG 0.352631 3.1:-44600292 MS.gene94952:CDS
GGTGGAATTAGGGTTGAATT+AGG 0.356484 3.1:-44600141 MS.gene94952:CDS
GGGATGATGCCTCAATTTCC+TGG 0.360064 3.1:-44599109 MS.gene94952:CDS
TACCGGTGGTGGTGGAATTA+GGG 0.363590 3.1:-44600151 MS.gene94952:CDS
GGTAATGGTGGAAATGGATT+TGG 0.364183 3.1:-44599271 MS.gene94952:CDS
GTGATGAATCTAGGGTTTCT+GGG 0.368364 3.1:-44600221 MS.gene94952:CDS
GGTGGTGGAGGAGGTGGTGG+AGG 0.371298 3.1:-44599844 MS.gene94952:CDS
ATTGGTGGTGGAGGAGGTGA+AGG 0.371730 3.1:-44599877 MS.gene94952:CDS
ATAATTGGTAATGGTGGAAA+TGG 0.371958 3.1:-44599277 MS.gene94952:CDS
GTTGGAGGTGTTGGTTTGCC+TGG 0.373316 3.1:-44599085 MS.gene94952:CDS
GGAAATAATGTTATTGCTAT+TGG 0.375081 3.1:-44599895 MS.gene94952:CDS
ATCGTGAGCGGGACAGATAC+AGG 0.379036 3.1:-44598583 MS.gene94952:CDS
AATGATGGTGTTGGAGTTCA+GGG 0.380197 3.1:-44600072 MS.gene94952:CDS
AAGAAGGTTCAATCGGGTTC+TGG 0.380389 3.1:-44600300 MS.gene94952:CDS
GTTGAATTAGGTCAAGCATC+TGG 0.388751 3.1:-44600129 MS.gene94952:CDS
CAACAACACGGTGGTGTTGT+TGG 0.391289 3.1:-44600003 MS.gene94952:CDS
GAAGCTGAGTTATGCAAGTA+TGG 0.393302 3.1:-44599766 MS.gene94952:CDS
ATGGGTAGAATGGCAGGCTT+TGG 0.395593 3.1:-44599166 MS.gene94952:CDS
TGAATGGTCATTCGTTTAAT+GGG 0.398915 3.1:-44599633 MS.gene94952:CDS
GCATGATGAGGAGTGGGAGC+GGG 0.399423 3.1:-44598507 MS.gene94952:CDS
GTGGTGTTGTTGGTGGTGGA+GGG 0.400261 3.1:-44599951 MS.gene94952:CDS
GTGGGGTTAACCCGGGAAGA+AGG 0.401244 3.1:-44599513 MS.gene94952:CDS
GGGACAGATACAGGGAAGAT+AGG 0.403470 3.1:-44598574 MS.gene94952:CDS
CTTCAATCGTTGAGGAAGAA+TGG 0.404435 3.1:-44600357 MS.gene94952:CDS
AGAAATAGGGGTGGTGGGAT+AGG 0.404535 3.1:-44599310 MS.gene94952:CDS
TGTCAATCCGATGAGAAATA+GGG 0.407839 3.1:-44599323 MS.gene94952:CDS
TAACCCCACCACCGGCAGTT+TGG 0.409185 3.1:+44599527 None:intergenic
TTTCCTGGTGTTGGAGGTGT+TGG 0.411185 3.1:-44599094 MS.gene94952:CDS
AATGGATTTGGACAGGGTAT+TGG 0.411699 3.1:-44599259 MS.gene94952:CDS
AGGACCATCCATACCCGATT+GGG 0.412131 3.1:+44598994 None:intergenic
TTGTGGGTGATTTGCATTGG+TGG 0.416148 3.1:-44599807 MS.gene94952:CDS
TGATGGGGTTGATGAGAAGA+AGG 0.416268 3.1:-44600316 MS.gene94952:CDS
GGTGGTGGAGGAGGTGAAGG+GGG 0.418334 3.1:-44599874 MS.gene94952:CDS
GGGGTTAACCCGGGAAGAAG+GGG 0.421478 3.1:-44599511 MS.gene94952:CDS
TGCCGGTGGTGGGGTTAACC+CGG 0.424708 3.1:-44599521 MS.gene94952:CDS
AGGATGAGGAACACCATTCT+AGG 0.426512 3.1:-44598445 MS.gene94952:CDS
GCTGATGTGGGAGCTAAGCC+TGG 0.428646 3.1:-44599484 MS.gene94952:CDS
TTGGTGGTGGTGATGAATCT+AGG 0.429880 3.1:-44600230 MS.gene94952:CDS
GATCCGGTGGCTGGTGTTGT+TGG 0.430804 3.1:-44600270 MS.gene94952:CDS
CTCAACCTGACAATACCCTT+TGG 0.430864 3.1:+44599696 None:intergenic
GTTTCTGGGTTTCAGAATCA+AGG 0.432968 3.1:-44600207 MS.gene94952:CDS
TTTCAGAATCAAGGGTTTAG+AGG 0.433448 3.1:-44600198 MS.gene94952:CDS
TTGAGGAAGAATGGTGATTC+GGG 0.433890 3.1:-44600348 MS.gene94952:CDS
GGTCCGGCACCTCCATTCTC+GGG 0.437687 3.1:-44599130 MS.gene94952:CDS
ATGCCTCAATTTCCTGGTGT+TGG 0.438968 3.1:-44599103 MS.gene94952:CDS
ATAGCAATAACATTATTTCC+AGG 0.442010 3.1:+44599898 None:intergenic
TGGTGGTGGAGGAGGTGAAG+GGG 0.443449 3.1:-44599875 MS.gene94952:CDS
GTTGAGGAAGAATGGTGATT+CGG 0.444981 3.1:-44600349 MS.gene94952:CDS
GATTCGGGTGGTAGAATTGA+TGG 0.445389 3.1:-44600333 MS.gene94952:CDS
CCTCAATTTCCTGGTGTTGG+AGG 0.446456 3.1:-44599100 MS.gene94952:CDS
GGTGGTGAGGAACCTGGTGG+TGG 0.446918 3.1:-44598932 MS.gene94952:CDS
CCTCATCATGCTCTGGTTCA+CGG 0.446985 3.1:+44598519 None:intergenic
GTTGGATCGGGTACCGGTGG+TGG 0.448718 3.1:-44600162 MS.gene94952:CDS
TGAGGAACCTGGTGGTGGCA+GGG 0.451354 3.1:-44598927 MS.gene94952:CDS
GGTAATTATCAAGGTGGAGA+TGG 0.452637 3.1:-44599439 MS.gene94952:CDS
TGGTGGAAATGGATTTGGAC+AGG 0.453155 3.1:-44599266 MS.gene94952:CDS
GGCTTAGCTCCCACATCAGC+AGG 0.453413 3.1:+44599487 None:intergenic
TCAGAATAATAGGAATCAAC+AGG 0.455870 3.1:-44599554 MS.gene94952:CDS
GTACCTTCGCTCAGAAGAAC+CGG 0.456411 3.1:+44598781 None:intergenic
GGGATGCCTGTGAATGGAAT+GGG 0.457540 3.1:-44599025 MS.gene94952:CDS
TCCCACTCCTCATCATGCTC+TGG 0.460102 3.1:+44598512 None:intergenic
GGGTTCTGGTGTTCAGGATC+CGG 0.460531 3.1:-44600286 MS.gene94952:CDS
GGGAATTCTGGAGTTGGATC+GGG 0.461658 3.1:-44600174 MS.gene94952:CDS
GGTAGAATGGCAGGCTTTGG+AGG 0.461925 3.1:-44599163 MS.gene94952:CDS
ATATGCTGCAACTGCCTGTA+AGG 0.462613 3.1:-44599662 MS.gene94952:CDS
GGTCCCATGGGTAGAATGGC+AGG 0.463195 3.1:-44599172 MS.gene94952:CDS
TCCTGCATTTGGTGGTCCCA+TGG 0.463497 3.1:-44599185 MS.gene94952:CDS
ATTGCTATTGGTGGTGGAGG+AGG 0.463547 3.1:-44599883 MS.gene94952:CDS
CTATTTCTCATCGGATTGAC+AGG 0.464317 3.1:+44599325 None:intergenic
GGGCTGGAGAGTCAAGTTAT+GGG 0.464924 3.1:-44598907 MS.gene94952:CDS
TGATGAGAAGAAGGTTCAAT+CGG 0.466730 3.1:-44600307 MS.gene94952:CDS
ATTCGGGTGGTAGAATTGAT+GGG 0.467631 3.1:-44600332 MS.gene94952:CDS
AGAACCGGACCAGTCCCTTT+CGG 0.468266 3.1:+44598796 None:intergenic
GTGAACCAAACTGCCGGTGG+TGG 0.468522 3.1:-44599532 MS.gene94952:CDS
GATGATGCCCCAATCGGGTA+TGG 0.468653 3.1:-44599002 MS.gene94952:CDS
AACAATAATAATAACAATAG+AGG 0.469203 3.1:-44599403 MS.gene94952:CDS
GCTGAGGGTGCATCATCGGC+GGG 0.469229 3.1:+44599230 None:intergenic
TACAGGGATGATAGAGATCA+AGG 0.470663 3.1:-44598761 MS.gene94952:CDS
CCAAGTGGTGTTGTTGGTGG+TGG 0.473693 3.1:-44599955 MS.gene94952:CDS
ACAGATATGCTGATCATCAT+AGG 0.474123 3.1:-44598550 MS.gene94952:CDS
AGCATGATGAGGAGTGGGAG+CGG 0.475393 3.1:-44598508 MS.gene94952:CDS
GGATGGGGTGGTGAGGAACC+TGG 0.475809 3.1:-44598938 MS.gene94952:CDS
TGAGGCATCATCCCCGAGAA+TGG 0.475990 3.1:+44599118 None:intergenic
GGATCGGGTACCGGTGGTGG+TGG 0.476347 3.1:-44600159 MS.gene94952:CDS
CCAAATATGGGCGGATGGGG+TGG 0.477803 3.1:-44598950 MS.gene94952:CDS
ACGATCACGTGACCGTGGTC+GGG 0.478106 3.1:-44598645 MS.gene94952:CDS
CTCGAGATCGTGAGCGCGAA+AGG 0.479654 3.1:-44598616 MS.gene94952:CDS
GGATCCAAATATGGGCGGAT+GGG 0.480574 3.1:-44598954 MS.gene94952:CDS
TGGAGGCTATCCCGGTGGTC+CGG 0.480694 3.1:-44599146 MS.gene94952:CDS
TGGGGTTAACCCGGGAAGAA+GGG 0.481851 3.1:-44599512 MS.gene94952:CDS
CAAGTTCCAAGTGGTGTTGT+TGG 0.482440 3.1:-44599961 MS.gene94952:CDS
GATCCAAATATGGGCGGATG+GGG 0.482985 3.1:-44598953 MS.gene94952:CDS
GGTAGAGGTATAATTGGTAA+TGG 0.483294 3.1:-44599286 MS.gene94952:CDS
CATCCGCCCATATTTGGATC+CGG 0.484005 3.1:+44598956 None:intergenic
GGTGTTCAGGATCCGGTGGC+TGG 0.484127 3.1:-44600279 MS.gene94952:CDS
GAATGGAGGTGCCGGACCAC+CGG 0.484600 3.1:+44599135 None:intergenic
TCTCCAGCCCTGCCACCACC+AGG 0.485249 3.1:+44598920 None:intergenic
GTGGACTACTGATGCTGAGC+TGG 0.485315 3.1:-44599788 MS.gene94952:CDS
TGGAGGGGTTAATCTTAATA+GGG 0.485764 3.1:-44599935 MS.gene94952:CDS
GGTGGTAGTAATATTGCAAC+TGG 0.487592 3.1:-44599463 MS.gene94952:CDS
GGAAGTACTTTGTTATTTGT+GGG 0.488708 3.1:-44599823 MS.gene94952:CDS
AGGGCTGGAGAGTCAAGTTA+TGG 0.489172 3.1:-44598908 MS.gene94952:CDS
AACAATAGAGGTTATGGAAG+AGG 0.489326 3.1:-44599391 MS.gene94952:CDS
GCAGCATCAGACCATCAGTA+TGG 0.490533 3.1:-44598878 MS.gene94952:CDS
CTGGGTGGCAGAATAATATG+AGG 0.491968 3.1:-44598835 MS.gene94952:CDS
GGGGAATTCTGGAGTTGGAT+CGG 0.494719 3.1:-44600175 MS.gene94952:CDS
GCCTGTAAGGAAGGGATGAA+TGG 0.495821 3.1:-44599649 MS.gene94952:CDS
GGGTTAACCCGGGAAGAAGG+GGG 0.495920 3.1:-44599510 MS.gene94952:CDS
TGGTGGTCCCATGGGTAGAA+TGG 0.496209 3.1:-44599176 MS.gene94952:CDS
GGAAGAGGTAATTGGGGTAG+AGG 0.496528 3.1:-44599376 MS.gene94952:CDS
GAGGGAGTGAAGAGTGTTGG+TGG 0.496817 3.1:-44600246 MS.gene94952:CDS
GGGGTTAATCTTAATAGGGT+TGG 0.497622 3.1:-44599931 MS.gene94952:CDS
GTTATTGCTATTGGTGGTGG+AGG 0.497635 3.1:-44599886 MS.gene94952:CDS
TAGAGGGAACAATCCTGGTA+TGG 0.498649 3.1:-44599359 MS.gene94952:CDS
CATGATGAGGAGTGGGAGCG+GGG 0.499344 3.1:-44598506 MS.gene94952:CDS
TGCTGAGGGTGCATCATCGG+CGG 0.501313 3.1:+44599229 None:intergenic
TGGTGTTGTTGGTGGTGGAG+GGG 0.502558 3.1:-44599950 MS.gene94952:CDS
GTGGCTGGTGTTGTTGGTGA+GGG 0.503570 3.1:-44600264 MS.gene94952:CDS
GTTCTTCTGAGCGAAGGTAC+AGG 0.505164 3.1:-44598778 MS.gene94952:CDS
AACGATCACGTGACCGTGGT+CGG 0.505395 3.1:-44598646 MS.gene94952:CDS
AAATTGAGGAACAGAGAGGT+GGG 0.505477 3.1:-44600095 MS.gene94952:CDS
CCGATGAGAAATAGGGGTGG+TGG 0.506509 3.1:-44599316 MS.gene94952:CDS
GGAAGAGGGATGCCTGTGAA+TGG 0.507911 3.1:-44599031 MS.gene94952:CDS
GCAGGCTTTGGAGGCTATCC+CGG 0.508698 3.1:-44599154 MS.gene94952:CDS
ATGTGGCCGGATCCAAATAT+GGG 0.509782 3.1:-44598962 MS.gene94952:CDS
AATGTTATTGCTATTGGTGG+TGG 0.512566 3.1:-44599889 MS.gene94952:CDS
TATTTGTGGGTGATTTGCAT+TGG 0.512963 3.1:-44599810 MS.gene94952:CDS
CAACATTAACATCGTTGTAA+AGG 0.513179 3.1:+44600391 None:intergenic
ATCATCCCCATTCCATTCAC+AGG 0.513647 3.1:+44599019 None:intergenic
TGGGAAATTGAGTGAAATTG+AGG 0.514078 3.1:-44600109 MS.gene94952:CDS
TGGCCATTCAGGATCATGTC+CGG 0.514343 3.1:+44598706 None:intergenic
AATGGGGATGATGCCCCAAT+CGG 0.516902 3.1:-44599008 MS.gene94952:CDS
CCACCACCAACAACACCACT+TGG 0.517634 3.1:+44599955 None:intergenic
TCCCGGGTTAACCCCACCAC+CGG 0.519319 3.1:+44599519 None:intergenic
TGGTGAGAGTGGAGATCCTA+TGG 0.519526 3.1:-44600493 MS.gene94952:CDS
TGAACCAAACTGCCGGTGGT+GGG 0.519641 3.1:-44599531 MS.gene94952:CDS
GAACAGAGAGGTGGGAATGA+TGG 0.521511 3.1:-44600087 MS.gene94952:CDS
GGTATGGATGGTCCTAATAT+GGG 0.521905 3.1:-44598986 MS.gene94952:CDS
TGGTGGTGGTGATGAATCTA+GGG 0.524499 3.1:-44600229 MS.gene94952:CDS
GTTAATCTTAATAGGGTTGG+AGG 0.524976 3.1:-44599928 MS.gene94952:CDS
ATTTGCTGAGGGTGCATCAT+CGG 0.525663 3.1:+44599226 None:intergenic
CTTTACAACGATGTTAATGT+TGG 0.525709 3.1:-44600390 MS.gene94952:CDS
TGGGGTAGAGGGAACAATCC+TGG 0.526032 3.1:-44599364 MS.gene94952:CDS
ATCAAGATTATCACAGGATG+AGG 0.526107 3.1:-44598459 MS.gene94952:CDS
CCTCCAACACCAGGAAATTG+AGG 0.526290 3.1:+44599100 None:intergenic
ATCCCCGAGAATGGAGGTGC+CGG 0.526530 3.1:+44599127 None:intergenic
GTTCCAAGTGGTGTTGTTGG+TGG 0.526669 3.1:-44599958 MS.gene94952:CDS
CCTGCATTTGGTGGTCCCAT+GGG 0.526946 3.1:-44599184 MS.gene94952:CDS
AATGGAGGTGCCGGACCACC+GGG 0.527390 3.1:+44599136 None:intergenic
TTGAATTAGGTCAAGCATCT+GGG 0.528023 3.1:-44600128 MS.gene94952:CDS
CAGCAGCAGCAACAACAACA+CGG 0.529015 3.1:-44600015 MS.gene94952:CDS
AACGATGTTAATGTTGGTGA+AGG 0.529579 3.1:-44600384 MS.gene94952:CDS
GCTGCAACTGCCTGTAAGGA+AGG 0.530594 3.1:-44599658 MS.gene94952:CDS
CGGATCCAAATATGGGCGGA+TGG 0.533104 3.1:-44598955 MS.gene94952:CDS
TCGAGATCGTGAGCGCGAAA+GGG 0.533414 3.1:-44598615 MS.gene94952:CDS
ATATCTGCTGTAGCTGATGA+TGG 0.533479 3.1:-44600447 MS.gene94952:CDS
AACCCTAATTCCACCACCAC+CGG 0.533956 3.1:+44600149 None:intergenic
TCTGGAGTTGGATCGGGTAC+CGG 0.533999 3.1:-44600168 MS.gene94952:CDS
GGTGGTGGGATAGGTGGTAG+AGG 0.535372 3.1:-44599301 MS.gene94952:CDS
AATCCTGGTATGGGTGGTAG+AGG 0.535904 3.1:-44599349 MS.gene94952:CDS
TACTGTTAAGAAAATGGGCG+AGG 0.536096 3.1:-44599578 MS.gene94952:CDS
AGAGGTATAATTGGTAATGG+TGG 0.538059 3.1:-44599283 MS.gene94952:CDS
AGAGGGAACAATCCTGGTAT+GGG 0.539437 3.1:-44599358 MS.gene94952:CDS
TCCTAATATGGGAATGTGGC+CGG 0.540113 3.1:-44598975 MS.gene94952:CDS
ATGGGGATGATGCCCCAATC+GGG 0.540485 3.1:-44599007 MS.gene94952:CDS
AGGGATGCCTGTGAATGGAA+TGG 0.540944 3.1:-44599026 MS.gene94952:CDS
ATGGATGAAGCTGGTGAGAG+TGG 0.541337 3.1:-44600504 MS.gene94952:CDS
TTAACATGAGGTGCTACTCC+AGG 0.541597 3.1:+44599067 None:intergenic
GGACAGATACAGGGAAGATA+GGG 0.545324 3.1:-44598573 MS.gene94952:CDS
GTAATTATCAAGGTGGAGAT+GGG 0.545329 3.1:-44599438 MS.gene94952:CDS
CCCTGATTCATAATTTGCTG+AGG 0.546670 3.1:+44599214 None:intergenic
TTCAGAATCAAGGGTTTAGA+GGG 0.546803 3.1:-44600197 MS.gene94952:CDS
AAACCAACACCTCCAACACC+AGG 0.548121 3.1:+44599091 None:intergenic
GGTTATGGAAGAGGTAATTG+GGG 0.551409 3.1:-44599382 MS.gene94952:CDS
AATAGGGGTGGTGGGATAGG+TGG 0.551960 3.1:-44599307 MS.gene94952:CDS
ATAGAGGATCCGAAAGGGAC+TGG 0.556094 3.1:-44598805 MS.gene94952:CDS
GAAATTGAGGAACAGAGAGG+TGG 0.557421 3.1:-44600096 MS.gene94952:CDS
GAAGAGGTAATTGGGGTAGA+GGG 0.557497 3.1:-44599375 MS.gene94952:CDS
AGAATCAAGGGTTTAGAGGG+GGG 0.557810 3.1:-44600194 MS.gene94952:CDS
CAGCAGATATAGCTTCGTTA+CGG 0.560404 3.1:+44600460 None:intergenic
CCCATGGGACCACCAAATGC+AGG 0.560887 3.1:+44599184 None:intergenic
ACCCTAATAATGGATGAAGC+TGG 0.561656 3.1:-44600513 None:intergenic
TATGGGCGGATGGGGTGGTG+AGG 0.561796 3.1:-44598945 MS.gene94952:CDS
ATGCCCCAATCGGGTATGGA+TGG 0.561899 3.1:-44598998 MS.gene94952:CDS
GCAACTGGCGGTAATTATCA+AGG 0.562883 3.1:-44599448 MS.gene94952:CDS
AAAGCCTGCCATTCTACCCA+TGG 0.563042 3.1:+44599168 None:intergenic
GAAATCCAAAGGGTATTGTC+AGG 0.563157 3.1:-44599701 MS.gene94952:CDS
TTGGTGGTGGAGGAGGTGAA+GGG 0.563645 3.1:-44599876 MS.gene94952:CDS
ATGCCGGACATGATCCTGAA+TGG 0.563683 3.1:-44598709 MS.gene94952:CDS
TAGGACCATCCATACCCGAT+TGG 0.564509 3.1:+44598993 None:intergenic
TTTCTGGGTTTCAGAATCAA+GGG 0.564798 3.1:-44600206 MS.gene94952:CDS
GAACCAAACTGCCGGTGGTG+GGG 0.566772 3.1:-44599530 MS.gene94952:CDS
AGAGGTGGGAATGATGGTGT+TGG 0.567936 3.1:-44600081 MS.gene94952:CDS
ACCAGAGCATGATGAGGAGT+GGG 0.568730 3.1:-44598513 MS.gene94952:CDS
GGTGAGGGAGTGAAGAGTGT+TGG 0.568963 3.1:-44600249 MS.gene94952:CDS
AAGATGCTGATTATGGAAAG+AGG 0.570662 3.1:-44598418 MS.gene94952:CDS
ATGATGAGGAGTGGGAGCGG+GGG 0.571157 3.1:-44598505 MS.gene94952:CDS
AATAATGTTATTGCTATTGG+TGG 0.571653 3.1:-44599892 MS.gene94952:CDS
GAGGTGAATCCTGATAGAGC+TGG 0.572872 3.1:-44598854 MS.gene94952:CDS
GACGCAAAAGCAACAACACA+CGG 0.573917 3.1:+44599607 None:intergenic
GGATCCGAAAGGGACTGGTC+CGG 0.574149 3.1:-44598800 MS.gene94952:CDS
TGGGGTGGTGAGGAACCTGG+TGG 0.574865 3.1:-44598935 MS.gene94952:CDS
ATGGACAAGTGAAGGAGGTG+AGG 0.575630 3.1:-44599747 MS.gene94952:CDS
AAAAGATAGAGGATCCGAAA+GGG 0.575969 3.1:-44598810 MS.gene94952:CDS
TTCTTCTGAGCGAAGGTACA+GGG 0.576817 3.1:-44598777 MS.gene94952:CDS
GATGAGAAGAAGGTTCAATC+GGG 0.576960 3.1:-44600306 MS.gene94952:CDS
CCACCACCCCTATTTCTCAT+CGG 0.577429 3.1:+44599316 None:intergenic
GCCGGTGGTGGGGTTAACCC+GGG 0.577492 3.1:-44599520 MS.gene94952:CDS
AAGCTAGTGGGAAATCCAAA+GGG 0.577942 3.1:-44599711 MS.gene94952:CDS
CAGTAAATCAAGATTATCAC+AGG 0.578787 3.1:-44598465 MS.gene94952:CDS
TTCGGGTGGTAGAATTGATG+GGG 0.579338 3.1:-44600331 MS.gene94952:CDS
TTCTGGTGTTCAGGATCCGG+TGG 0.581128 3.1:-44600283 MS.gene94952:CDS
GGAGTTGGATCGGGTACCGG+TGG 0.581965 3.1:-44600165 MS.gene94952:CDS
CTGATTATGGAAAGAGGAGG+CGG 0.582435 3.1:-44598412 MS.gene94952:CDS
ATGATGGTGTTGGAGTTCAG+GGG 0.582618 3.1:-44600071 MS.gene94952:CDS
AACCAGAGCATGATGAGGAG+TGG 0.583423 3.1:-44598514 MS.gene94952:CDS
TGTTGTTGGAAACGATGGGT+TGG 0.583906 3.1:-44599989 MS.gene94952:CDS
GGTGGCTGGTGTTGTTGGTG+AGG 0.585170 3.1:-44600265 MS.gene94952:CDS
CGATGAGAAATAGGGGTGGT+GGG 0.587657 3.1:-44599315 MS.gene94952:CDS
TCACCAACAACACCAGCCAC+CGG 0.589770 3.1:+44600267 None:intergenic
CCTCAGCAAATTATGAATCA+GGG 0.592197 3.1:-44599214 MS.gene94952:CDS
GGTCCTCTACCACCCATACC+AGG 0.592678 3.1:+44599346 None:intergenic
TTACGGTGGAACTGATCCAT+AGG 0.596056 3.1:+44600477 None:intergenic
ATGCAAGTATGGACAAGTGA+AGG 0.598593 3.1:-44599755 MS.gene94952:CDS
CAGAATCAAGGGTTTAGAGG+GGG 0.599693 3.1:-44600195 MS.gene94952:CDS
CAACAGGTGAACCAAACTGC+CGG 0.599970 3.1:-44599538 MS.gene94952:CDS
AAAGCTAGTGGGAAATCCAA+AGG 0.600695 3.1:-44599712 MS.gene94952:CDS
CCTGATTCATAATTTGCTGA+GGG 0.603041 3.1:+44599215 None:intergenic
GTCCGGCACCTCCATTCTCG+GGG 0.604768 3.1:-44599129 MS.gene94952:CDS
CTGCAACTGCCTGTAAGGAA+GGG 0.606830 3.1:-44599657 MS.gene94952:CDS
GGAGTGAAGAGTGTTGGTGG+TGG 0.607165 3.1:-44600243 MS.gene94952:CDS
GGTGGTGTTGTTGGAAACGA+TGG 0.607566 3.1:-44599994 MS.gene94952:CDS
GATTCACCTCACCATACTGA+TGG 0.608524 3.1:+44598867 None:intergenic
CGAGATCGTGAGCGCGAAAG+GGG 0.610782 3.1:-44598614 MS.gene94952:CDS
GGTGGAAATGGATTTGGACA+GGG 0.612223 3.1:-44599265 MS.gene94952:CDS
CAGATATAGCTTCGTTACGG+TGG 0.617616 3.1:+44600463 None:intergenic
AAGCCTGCCATTCTACCCAT+GGG 0.620243 3.1:+44599169 None:intergenic
AGATCGTGAGCGCGAAAGGG+GGG 0.621518 3.1:-44598612 MS.gene94952:CDS
TCGTGAGCGGGACAGATACA+GGG 0.623073 3.1:-44598582 MS.gene94952:CDS
GTCAATCCGATGAGAAATAG+GGG 0.626713 3.1:-44599322 MS.gene94952:CDS
GGTCCGGTTCTTCTGAGCGA+AGG 0.627233 3.1:-44598784 MS.gene94952:CDS
CAAGTATGGACAAGTGAAGG+AGG 0.629874 3.1:-44599752 MS.gene94952:CDS
CCGTGAACCAGAGCATGATG+AGG 0.630498 3.1:-44598519 MS.gene94952:CDS
AGGAAGAATGGTGATTCGGG+TGG 0.633804 3.1:-44600345 MS.gene94952:CDS
ATGGTCATTCGTTTAATGGG+AGG 0.634630 3.1:-44599630 MS.gene94952:CDS
AGGGTTGGAGGAAATGGACC+TGG 0.637061 3.1:-44599916 MS.gene94952:CDS
GGACCATCCATACCCGATTG+GGG 0.637802 3.1:+44598995 None:intergenic
AGGTGAATCCTGATAGAGCT+GGG 0.637986 3.1:-44598853 MS.gene94952:CDS
GGGAACAATCCTGGTATGGG+TGG 0.644353 3.1:-44599355 MS.gene94952:CDS
GGCTTTGGAGGCTATCCCGG+TGG 0.645883 3.1:-44599151 MS.gene94952:CDS
GGCATCATCCCCGAGAATGG+AGG 0.646866 3.1:+44599121 None:intergenic
AAAGCATCGTGATGATAGAG+AGG 0.651867 3.1:-44598678 MS.gene94952:CDS
CGCGAACGATCACGTGACCG+TGG 0.652791 3.1:-44598650 MS.gene94952:CDS
GAGATCGTGAGCGCGAAAGG+GGG 0.653665 3.1:-44598613 MS.gene94952:CDS
ACAGGGATGATAGAGATCAA+GGG 0.654179 3.1:-44598760 MS.gene94952:CDS
ATCAGACCATCAGTATGGTG+AGG 0.661084 3.1:-44598873 MS.gene94952:CDS
GGCTGGAGAGTCAAGTTATG+GGG 0.661634 3.1:-44598906 MS.gene94952:CDS
GTGGTGTTGTTGGAAACGAT+GGG 0.661806 3.1:-44599993 MS.gene94952:CDS
TTTATGATGAGAAAGCTAGT+GGG 0.669485 3.1:-44599723 MS.gene94952:CDS
TCAGAATCAAGGGTTTAGAG+GGG 0.672081 3.1:-44600196 MS.gene94952:CDS
CTGAGGGTGCATCATCGGCG+GGG 0.672788 3.1:+44599231 None:intergenic
AGTGAAATTGAGGAACAGAG+AGG 0.674116 3.1:-44600099 MS.gene94952:CDS
GTTGCAATATTACTACCACC+AGG 0.675761 3.1:+44599466 None:intergenic
GCATCGTGATGATAGAGAGG+TGG 0.675962 3.1:-44598675 MS.gene94952:CDS
TGGAGAGTCAAGTTATGGGG+AGG 0.676940 3.1:-44598903 MS.gene94952:CDS
TGGGTGGCAGAATAATATGA+GGG 0.682915 3.1:-44598834 MS.gene94952:CDS
TGGCCGGATCCAAATATGGG+CGG 0.683016 3.1:-44598959 MS.gene94952:CDS
GGATGCCTGTGAATGGAATG+GGG 0.684718 3.1:-44599024 MS.gene94952:CDS
CAGGTGAACCAAACTGCCGG+TGG 0.686986 3.1:-44599535 MS.gene94952:CDS
GGTAGTAATATTGCAACTGG+CGG 0.689669 3.1:-44599460 MS.gene94952:CDS
CAAGGGAAAGTATTACTCAG+AGG 0.692157 3.1:+44598385 None:intergenic
GATGTGGGAGCTAAGCCTGG+TGG 0.699785 3.1:-44599481 MS.gene94952:CDS
ACTGGCGGTAATTATCAAGG+TGG 0.714404 3.1:-44599445 MS.gene94952:CDS
ATGGTCCTAATATGGGAATG+TGG 0.718453 3.1:-44598979 MS.gene94952:CDS
ATGCTGATTATGGAAAGAGG+AGG 0.719817 3.1:-44598415 MS.gene94952:CDS
AATCCGATGAGAAATAGGGG+TGG 0.741100 3.1:-44599319 MS.gene94952:CDS
TGAATCCTGATAGAGCTGGG+TGG 0.774886 3.1:-44598850 MS.gene94952:CDS
TTGGTGAGACAAGTTCCAAG+TGG 0.780474 3.1:-44599970 MS.gene94952:CDS
CAGCAGCAACAACAACACGG+TGG 0.798807 3.1:-44600012 MS.gene94952:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACAATAATAATAACAATAG+AGG - chr3.1:44599498-44599517 MS.gene94952:CDS 15.0%
!! AATAATAACAATAGAGGTTA+TGG - chr3.1:44599504-44599523 MS.gene94952:CDS 20.0%
! ATAGCAATAACATTATTTCC+AGG + chr3.1:44599006-44599025 None:intergenic 25.0%
! GGAAATAATGTTATTGCTAT+TGG - chr3.1:44599006-44599025 MS.gene94952:CDS 25.0%
!! AATAATGTTATTGCTATTGG+TGG - chr3.1:44599009-44599028 MS.gene94952:CDS 25.0%
!! CCTTTTACTGTTAAGAAAAT+GGG - chr3.1:44599318-44599337 MS.gene94952:CDS 25.0%
AATATGAGGGAAAAAGATAG+AGG - chr3.1:44600080-44600099 MS.gene94952:CDS 30.0%
ATGAATGGTCATTCGTTTAA+TGG - chr3.1:44599267-44599286 MS.gene94952:CDS 30.0%
CAACATTAACATCGTTGTAA+AGG + chr3.1:44598513-44598532 None:intergenic 30.0%
CAGTAAATCAAGATTATCAC+AGG - chr3.1:44600436-44600455 MS.gene94952:CDS 30.0%
CTTTACAACGATGTTAATGT+TGG - chr3.1:44598511-44598530 MS.gene94952:CDS 30.0%
TCAGAATAATAGGAATCAAC+AGG - chr3.1:44599347-44599366 MS.gene94952:CDS 30.0%
TGAATGGTCATTCGTTTAAT+GGG - chr3.1:44599268-44599287 MS.gene94952:CDS 30.0%
TTTATGATGAGAAAGCTAGT+GGG - chr3.1:44599178-44599197 MS.gene94952:CDS 30.0%
! CCCATTTTCTTAACAGTAAA+AGG + chr3.1:44599321-44599340 None:intergenic 30.0%
! GCCTTTTACTGTTAAGAAAA+TGG - chr3.1:44599317-44599336 MS.gene94952:CDS 30.0%
! TTTTATGATGAGAAAGCTAG+TGG - chr3.1:44599177-44599196 MS.gene94952:CDS 30.0%
!! AGGAAGTACTTTGTTATTTG+TGG - chr3.1:44599077-44599096 MS.gene94952:CDS 30.0%
!! ATAATTGGTAATGGTGGAAA+TGG - chr3.1:44599624-44599643 MS.gene94952:CDS 30.0%
!! GGAAGTACTTTGTTATTTGT+GGG - chr3.1:44599078-44599097 MS.gene94952:CDS 30.0%
AAAAAGATAGAGGATCCGAA+AGG - chr3.1:44600090-44600109 MS.gene94952:CDS 35.0%
AAAAAGGCAGGATTAACATG+AGG + chr3.1:44599849-44599868 None:intergenic 35.0%
AAAAGATAGAGGATCCGAAA+GGG - chr3.1:44600091-44600110 MS.gene94952:CDS 35.0%
AACAATAGAGGTTATGGAAG+AGG - chr3.1:44599510-44599529 MS.gene94952:CDS 35.0%
ACAGATATGCTGATCATCAT+AGG - chr3.1:44600351-44600370 MS.gene94952:CDS 35.0%
AGGTTATGGAAGAGGTAATT+GGG - chr3.1:44599518-44599537 MS.gene94952:CDS 35.0%
ATCAAGATTATCACAGGATG+AGG - chr3.1:44600442-44600461 MS.gene94952:CDS 35.0%
CCTCAGCAAATTATGAATCA+GGG - chr3.1:44599687-44599706 MS.gene94952:CDS 35.0%
GTAATTATCAAGGTGGAGAT+GGG - chr3.1:44599463-44599482 MS.gene94952:CDS 35.0%
GTTAATCTTAATAGGGTTGG+AGG - chr3.1:44598973-44598992 MS.gene94952:CDS 35.0%
TGATGAGAAGAAGGTTCAAT+CGG - chr3.1:44598594-44598613 MS.gene94952:CDS 35.0%
TGGAGGGGTTAATCTTAATA+GGG - chr3.1:44598966-44598985 MS.gene94952:CDS 35.0%
TGGGAAATTGAGTGAAATTG+AGG - chr3.1:44598792-44598811 MS.gene94952:CDS 35.0%
TGTCAATCCGATGAGAAATA+GGG - chr3.1:44599578-44599597 MS.gene94952:CDS 35.0%
TTCAGAATCAAGGGTTTAGA+GGG - chr3.1:44598704-44598723 MS.gene94952:CDS 35.0%
TTGAATTAGGTCAAGCATCT+GGG - chr3.1:44598773-44598792 MS.gene94952:CDS 35.0%
TTTCAGAATCAAGGGTTTAG+AGG - chr3.1:44598703-44598722 MS.gene94952:CDS 35.0%
TTTCTGGGTTTCAGAATCAA+GGG - chr3.1:44598695-44598714 MS.gene94952:CDS 35.0%
! AACGATGTTAATGTTGGTGA+AGG - chr3.1:44598517-44598536 MS.gene94952:CDS 35.0%
! AAGATGCTGATTATGGAAAG+AGG - chr3.1:44600483-44600502 MS.gene94952:CDS 35.0%
! AAGGTTTTCTTCAATCGTTG+AGG - chr3.1:44598536-44598555 MS.gene94952:CDS 35.0%
! AATGTTATTGCTATTGGTGG+TGG - chr3.1:44599012-44599031 MS.gene94952:CDS 35.0%
! AGGTCAAAAGATGCTGATTA+TGG - chr3.1:44600476-44600495 MS.gene94952:CDS 35.0%
! ATAGGTGGTAGAGGTATAAT+TGG - chr3.1:44599609-44599628 MS.gene94952:CDS 35.0%
! GGTAGAGGTATAATTGGTAA+TGG - chr3.1:44599615-44599634 MS.gene94952:CDS 35.0%
! TATTTGTGGGTGATTTGCAT+TGG - chr3.1:44599091-44599110 MS.gene94952:CDS 35.0%
!! AGAGGTATAATTGGTAATGG+TGG - chr3.1:44599618-44599637 MS.gene94952:CDS 35.0%
!! CCTGATTCATAATTTGCTGA+GGG + chr3.1:44599689-44599708 None:intergenic 35.0%
!!! CATGTTAATCCTGCCTTTTT+TGG - chr3.1:44599849-44599868 MS.gene94952:CDS 35.0%
!!! TTGTCAGGTTGAGTTTTATG+AGG - chr3.1:44599215-44599234 MS.gene94952:CDS 35.0%
AAAGCTAGTGGGAAATCCAA+AGG - chr3.1:44599189-44599208 MS.gene94952:CDS 40.0%
AAATTGAGGAACAGAGAGGT+GGG - chr3.1:44598806-44598825 MS.gene94952:CDS 40.0%
AAGCTAGTGGGAAATCCAAA+GGG - chr3.1:44599190-44599209 MS.gene94952:CDS 40.0%
ACAGGGATGATAGAGATCAA+GGG - chr3.1:44600141-44600160 MS.gene94952:CDS 40.0%
AGTGAAATTGAGGAACAGAG+AGG - chr3.1:44598802-44598821 MS.gene94952:CDS 40.0%
ATATCTGCTGTAGCTGATGA+TGG - chr3.1:44598454-44598473 MS.gene94952:CDS 40.0%
ATGCAAGTATGGACAAGTGA+AGG - chr3.1:44599146-44599165 MS.gene94952:CDS 40.0%
ATGGTCATTCGTTTAATGGG+AGG - chr3.1:44599271-44599290 MS.gene94952:CDS 40.0%
ATGGTCCTAATATGGGAATG+TGG - chr3.1:44599922-44599941 MS.gene94952:CDS 40.0%
ATTCGGGTGGTAGAATTGAT+GGG - chr3.1:44598569-44598588 MS.gene94952:CDS 40.0%
CAGCAGATATAGCTTCGTTA+CGG + chr3.1:44598444-44598463 None:intergenic 40.0%
CCCTCAGCAAATTATGAATC+AGG - chr3.1:44599686-44599705 MS.gene94952:CDS 40.0%
CTGTCAATCCGATGAGAAAT+AGG - chr3.1:44599577-44599596 MS.gene94952:CDS 40.0%
CTTAATAGGGTTGGAGGAAA+TGG - chr3.1:44598979-44598998 MS.gene94952:CDS 40.0%
CTTCAATCGTTGAGGAAGAA+TGG - chr3.1:44598544-44598563 MS.gene94952:CDS 40.0%
GAAGCTGAGTTATGCAAGTA+TGG - chr3.1:44599135-44599154 MS.gene94952:CDS 40.0%
GAGGTTATGGAAGAGGTAAT+TGG - chr3.1:44599517-44599536 MS.gene94952:CDS 40.0%
GATGAGAAGAAGGTTCAATC+GGG - chr3.1:44598595-44598614 MS.gene94952:CDS 40.0%
GGGGTTAATCTTAATAGGGT+TGG - chr3.1:44598970-44598989 MS.gene94952:CDS 40.0%
GGTAATTATCAAGGTGGAGA+TGG - chr3.1:44599462-44599481 MS.gene94952:CDS 40.0%
GGTAGTAATATTGCAACTGG+CGG - chr3.1:44599441-44599460 MS.gene94952:CDS 40.0%
GGTATGGATGGTCCTAATAT+GGG - chr3.1:44599915-44599934 MS.gene94952:CDS 40.0%
GGTGGAATTAGGGTTGAATT+AGG - chr3.1:44598760-44598779 MS.gene94952:CDS 40.0%
GGTGGTAGTAATATTGCAAC+TGG - chr3.1:44599438-44599457 MS.gene94952:CDS 40.0%
GGTTATGGAAGAGGTAATTG+GGG - chr3.1:44599519-44599538 MS.gene94952:CDS 40.0%
GTCAATCCGATGAGAAATAG+GGG - chr3.1:44599579-44599598 MS.gene94952:CDS 40.0%
GTGGAGGGGTTAATCTTAAT+AGG - chr3.1:44598965-44598984 MS.gene94952:CDS 40.0%
GTTGAATTAGGTCAAGCATC+TGG - chr3.1:44598772-44598791 MS.gene94952:CDS 40.0%
GTTGAGGAAGAATGGTGATT+CGG - chr3.1:44598552-44598571 MS.gene94952:CDS 40.0%
GTTGCAATATTACTACCACC+AGG + chr3.1:44599438-44599457 None:intergenic 40.0%
TACAGGGATGATAGAGATCA+AGG - chr3.1:44600140-44600159 MS.gene94952:CDS 40.0%
TACTGTTAAGAAAATGGGCG+AGG - chr3.1:44599323-44599342 MS.gene94952:CDS 40.0%
TCAGAATCAAGGGTTTAGAG+GGG - chr3.1:44598705-44598724 MS.gene94952:CDS 40.0%
TCATCACGATGCTTTCTTTC+TGG + chr3.1:44600218-44600237 None:intergenic 40.0%
TGGGTGGCAGAATAATATGA+GGG - chr3.1:44600067-44600086 MS.gene94952:CDS 40.0%
TTGAGGAAGAATGGTGATTC+GGG - chr3.1:44598553-44598572 MS.gene94952:CDS 40.0%
! AATGATGGTGTTGGAGTTCA+GGG - chr3.1:44598829-44598848 MS.gene94952:CDS 40.0%
! AATGGATTTGGACAGGGTAT+TGG - chr3.1:44599642-44599661 MS.gene94952:CDS 40.0%
! ATGCTGATTATGGAAAGAGG+AGG - chr3.1:44600486-44600505 MS.gene94952:CDS 40.0%
! CAGCATCTTTTGACCTAGAA+TGG + chr3.1:44600472-44600491 None:intergenic 40.0%
! CTATTTCTCATCGGATTGAC+AGG + chr3.1:44599579-44599598 None:intergenic 40.0%
! GGTAATGGTGGAAATGGATT+TGG - chr3.1:44599630-44599649 MS.gene94952:CDS 40.0%
! GTGATGAATCTAGGGTTTCT+GGG - chr3.1:44598680-44598699 MS.gene94952:CDS 40.0%
! GTTTCTGGGTTTCAGAATCA+AGG - chr3.1:44598694-44598713 MS.gene94952:CDS 40.0%
!! AAAGCATCGTGATGATAGAG+AGG - chr3.1:44600223-44600242 MS.gene94952:CDS 40.0%
!! CCCTGATTCATAATTTGCTG+AGG + chr3.1:44599690-44599709 None:intergenic 40.0%
!! GAAATCCAAAGGGTATTGTC+AGG - chr3.1:44599200-44599219 MS.gene94952:CDS 40.0%
!!! AATCCTGCCTTTTTTGGAAG+AGG - chr3.1:44599855-44599874 MS.gene94952:CDS 40.0%
!!! ATCCTGCCTTTTTTGGAAGA+GGG - chr3.1:44599856-44599875 MS.gene94952:CDS 40.0%
AAGAAGGTTCAATCGGGTTC+TGG - chr3.1:44598601-44598620 MS.gene94952:CDS 45.0%
AATCCGATGAGAAATAGGGG+TGG - chr3.1:44599582-44599601 MS.gene94952:CDS 45.0%
AATGTGGCCGGATCCAAATA+TGG - chr3.1:44599938-44599957 MS.gene94952:CDS 45.0%
ACCATTCATCCCTTCCTTAC+AGG + chr3.1:44599256-44599275 None:intergenic 45.0%
ACTGGCGGTAATTATCAAGG+TGG - chr3.1:44599456-44599475 MS.gene94952:CDS 45.0%
AGAATCAAGGGTTTAGAGGG+GGG - chr3.1:44598707-44598726 MS.gene94952:CDS 45.0%
AGAGGGAACAATCCTGGTAT+GGG - chr3.1:44599543-44599562 MS.gene94952:CDS 45.0%
AGGATGAGGAACACCATTCT+AGG - chr3.1:44600456-44600475 MS.gene94952:CDS 45.0%
AGGCATCCCTCTTCCAAAAA+AGG + chr3.1:44599865-44599884 None:intergenic 45.0%
AGGTGAATCCTGATAGAGCT+GGG - chr3.1:44600048-44600067 MS.gene94952:CDS 45.0%
ATATGCTGCAACTGCCTGTA+AGG - chr3.1:44599239-44599258 MS.gene94952:CDS 45.0%
ATCAGACCATCAGTATGGTG+AGG - chr3.1:44600028-44600047 MS.gene94952:CDS 45.0%
ATCATCCCCATTCCATTCAC+AGG + chr3.1:44599885-44599904 None:intergenic 45.0%
ATCCCTCTTCCAAAAAAGGC+AGG + chr3.1:44599861-44599880 None:intergenic 45.0%
ATGCCTCAATTTCCTGGTGT+TGG - chr3.1:44599798-44599817 MS.gene94952:CDS 45.0%
ATGTGGCCGGATCCAAATAT+GGG - chr3.1:44599939-44599958 MS.gene94952:CDS 45.0%
CAAGTATGGACAAGTGAAGG+AGG - chr3.1:44599149-44599168 MS.gene94952:CDS 45.0%
CAGAATCAAGGGTTTAGAGG+GGG - chr3.1:44598706-44598725 MS.gene94952:CDS 45.0%
CAGATATAGCTTCGTTACGG+TGG + chr3.1:44598441-44598460 None:intergenic 45.0%
CTCAACCTGACAATACCCTT+TGG + chr3.1:44599208-44599227 None:intergenic 45.0%
CTGATTATGGAAAGAGGAGG+CGG - chr3.1:44600489-44600508 MS.gene94952:CDS 45.0%
CTGGGTGGCAGAATAATATG+AGG - chr3.1:44600066-44600085 MS.gene94952:CDS 45.0%
GAAATTGAGGAACAGAGAGG+TGG - chr3.1:44598805-44598824 MS.gene94952:CDS 45.0%
GAAGAGGTAATTGGGGTAGA+GGG - chr3.1:44599526-44599545 MS.gene94952:CDS 45.0%
GACGCAAAAGCAACAACACA+CGG + chr3.1:44599297-44599316 None:intergenic 45.0%
GATTCACCTCACCATACTGA+TGG + chr3.1:44600037-44600056 None:intergenic 45.0%
GATTCGGGTGGTAGAATTGA+TGG - chr3.1:44598568-44598587 MS.gene94952:CDS 45.0%
GCAACTGGCGGTAATTATCA+AGG - chr3.1:44599453-44599472 MS.gene94952:CDS 45.0%
GCACCTAGAGAAAAAGATGC+CGG - chr3.1:44600176-44600195 MS.gene94952:CDS 45.0%
GGACAGATACAGGGAAGATA+GGG - chr3.1:44600328-44600347 MS.gene94952:CDS 45.0%
GGGTATGGATGGTCCTAATA+TGG - chr3.1:44599914-44599933 MS.gene94952:CDS 45.0%
TAGAGGGAACAATCCTGGTA+TGG - chr3.1:44599542-44599561 MS.gene94952:CDS 45.0%
TCCTAATATGGGAATGTGGC+CGG - chr3.1:44599926-44599945 MS.gene94952:CDS 45.0%
TGTTGTTGGAAACGATGGGT+TGG - chr3.1:44598912-44598931 MS.gene94952:CDS 45.0%
TTACGGTGGAACTGATCCAT+AGG + chr3.1:44598427-44598446 None:intergenic 45.0%
TTCGGGTGGTAGAATTGATG+GGG - chr3.1:44598570-44598589 MS.gene94952:CDS 45.0%
TTGGTGAGACAAGTTCCAAG+TGG - chr3.1:44598931-44598950 MS.gene94952:CDS 45.0%
! ATGATGGTGTTGGAGTTCAG+GGG - chr3.1:44598830-44598849 MS.gene94952:CDS 45.0%
! ATTTGCTGAGGGTGCATCAT+CGG + chr3.1:44599678-44599697 None:intergenic 45.0%
! GAATGATGGTGTTGGAGTTC+AGG - chr3.1:44598828-44598847 MS.gene94952:CDS 45.0%
! GGTGATGAATCTAGGGTTTC+TGG - chr3.1:44598679-44598698 MS.gene94952:CDS 45.0%
! GGTGGAAATGGATTTGGACA+GGG - chr3.1:44599636-44599655 MS.gene94952:CDS 45.0%
! TGCTTTCTTTCTGGCCATTC+AGG + chr3.1:44600209-44600228 None:intergenic 45.0%
! TGGTGGAAATGGATTTGGAC+AGG - chr3.1:44599635-44599654 MS.gene94952:CDS 45.0%
! TGTCCGGCATCTTTTTCTCT+AGG + chr3.1:44600182-44600201 None:intergenic 45.0%
! TTCTTCTGAGCGAAGGTACA+GGG - chr3.1:44600124-44600143 MS.gene94952:CDS 45.0%
! TTGTGGGTGATTTGCATTGG+TGG - chr3.1:44599094-44599113 MS.gene94952:CDS 45.0%
!! CAAGTTCCAAGTGGTGTTGT+TGG - chr3.1:44598940-44598959 MS.gene94952:CDS 45.0%
!! CAGGGTTTTGATCCTGCATT+TGG - chr3.1:44599705-44599724 MS.gene94952:CDS 45.0%
!! GGTTTTGATCCTGCATTTGG+TGG - chr3.1:44599708-44599727 MS.gene94952:CDS 45.0%
!! GTGGTGTTGTTGGAAACGAT+GGG - chr3.1:44598908-44598927 MS.gene94952:CDS 45.0%
!! GTTATTGCTATTGGTGGTGG+AGG - chr3.1:44599015-44599034 MS.gene94952:CDS 45.0%
!! TGATGGGGTTGATGAGAAGA+AGG - chr3.1:44598585-44598604 MS.gene94952:CDS 45.0%
!! TGGTGGTGGTGATGAATCTA+GGG - chr3.1:44598672-44598691 MS.gene94952:CDS 45.0%
!! TTAACATGAGGTGCTACTCC+AGG + chr3.1:44599837-44599856 None:intergenic 45.0%
!! TTGGTGGTGGTGATGAATCT+AGG - chr3.1:44598671-44598690 MS.gene94952:CDS 45.0%
AAACCAACACCTCCAACACC+AGG + chr3.1:44599813-44599832 None:intergenic 50.0%
AAAGCCTGCCATTCTACCCA+TGG + chr3.1:44599736-44599755 None:intergenic 50.0%
AACCAGAGCATGATGAGGAG+TGG - chr3.1:44600387-44600406 MS.gene94952:CDS 50.0%
AACCCTAATTCCACCACCAC+CGG + chr3.1:44598755-44598774 None:intergenic 50.0%
AAGCCTGCCATTCTACCCAT+GGG + chr3.1:44599735-44599754 None:intergenic 50.0%
AATCCTGGTATGGGTGGTAG+AGG - chr3.1:44599552-44599571 MS.gene94952:CDS 50.0%
AATGGGGATGATGCCCCAAT+CGG - chr3.1:44599893-44599912 MS.gene94952:CDS 50.0%
ACCAGAGCATGATGAGGAGT+GGG - chr3.1:44600388-44600407 MS.gene94952:CDS 50.0%
AGGACCATCCATACCCGATT+GGG + chr3.1:44599910-44599929 None:intergenic 50.0%
AGGGATGCCTGTGAATGGAA+TGG - chr3.1:44599875-44599894 MS.gene94952:CDS 50.0%
AGGGCTGGAGAGTCAAGTTA+TGG - chr3.1:44599993-44600012 MS.gene94952:CDS 50.0%
ATAGAGGATCCGAAAGGGAC+TGG - chr3.1:44600096-44600115 MS.gene94952:CDS 50.0%
ATGCCGGACATGATCCTGAA+TGG - chr3.1:44600192-44600211 MS.gene94952:CDS 50.0%
ATGGACAAGTGAAGGAGGTG+AGG - chr3.1:44599154-44599173 MS.gene94952:CDS 50.0%
ATGGATGAAGCTGGTGAGAG+TGG - chr3.1:44598397-44598416 MS.gene94952:CDS 50.0%
ATGGGTAGAATGGCAGGCTT+TGG - chr3.1:44599735-44599754 MS.gene94952:CDS 50.0%
CAACAGGTGAACCAAACTGC+CGG - chr3.1:44599363-44599382 MS.gene94952:CDS 50.0%
CAGCAGCAGCAACAACAACA+CGG - chr3.1:44598886-44598905 MS.gene94952:CDS 50.0%
CATCCGCCCATATTTGGATC+CGG + chr3.1:44599948-44599967 None:intergenic 50.0%
CCTCCAACACCAGGAAATTG+AGG + chr3.1:44599804-44599823 None:intergenic 50.0%
CGATGAGAAATAGGGGTGGT+GGG - chr3.1:44599586-44599605 MS.gene94952:CDS 50.0%
CTGCAACTGCCTGTAAGGAA+GGG - chr3.1:44599244-44599263 MS.gene94952:CDS 50.0%
GAACAGAGAGGTGGGAATGA+TGG - chr3.1:44598814-44598833 MS.gene94952:CDS 50.0%
GAGGTGAATCCTGATAGAGC+TGG - chr3.1:44600047-44600066 MS.gene94952:CDS 50.0%
GATCCAAATATGGGCGGATG+GGG - chr3.1:44599948-44599967 MS.gene94952:CDS 50.0%
GCAGCATCAGACCATCAGTA+TGG - chr3.1:44600023-44600042 MS.gene94952:CDS 50.0%
GCATCGTGATGATAGAGAGG+TGG - chr3.1:44600226-44600245 MS.gene94952:CDS 50.0%
GCCTGTAAGGAAGGGATGAA+TGG - chr3.1:44599252-44599271 MS.gene94952:CDS 50.0%
GGAAGAGGTAATTGGGGTAG+AGG - chr3.1:44599525-44599544 MS.gene94952:CDS 50.0%
GGATCCAAATATGGGCGGAT+GGG - chr3.1:44599947-44599966 MS.gene94952:CDS 50.0%
GGATGCCTGTGAATGGAATG+GGG - chr3.1:44599877-44599896 MS.gene94952:CDS 50.0%
GGCTGGAGAGTCAAGTTATG+GGG - chr3.1:44599995-44600014 MS.gene94952:CDS 50.0%
GGGACAGATACAGGGAAGAT+AGG - chr3.1:44600327-44600346 MS.gene94952:CDS 50.0%
GGGATGATGCCTCAATTTCC+TGG - chr3.1:44599792-44599811 MS.gene94952:CDS 50.0%
GGGATGCCTGTGAATGGAAT+GGG - chr3.1:44599876-44599895 MS.gene94952:CDS 50.0%
GGGCTGGAGAGTCAAGTTAT+GGG - chr3.1:44599994-44600013 MS.gene94952:CDS 50.0%
GTACCTTCGCTCAGAAGAAC+CGG + chr3.1:44600123-44600142 None:intergenic 50.0%
TAGGACCATCCATACCCGAT+TGG + chr3.1:44599911-44599930 None:intergenic 50.0%
TCCGGCCACATTCCCATATT+AGG + chr3.1:44599930-44599949 None:intergenic 50.0%
TGAATCCTGATAGAGCTGGG+TGG - chr3.1:44600051-44600070 MS.gene94952:CDS 50.0%
TGGAGAGTCAAGTTATGGGG+AGG - chr3.1:44599998-44600017 MS.gene94952:CDS 50.0%
TGGCCATTCAGGATCATGTC+CGG + chr3.1:44600198-44600217 None:intergenic 50.0%
TGGGCGAGGCTCAGAATAAT+AGG - chr3.1:44599337-44599356 MS.gene94952:CDS 50.0%
TGGTGAGAGTGGAGATCCTA+TGG - chr3.1:44598408-44598427 MS.gene94952:CDS 50.0%
! AGAGGTGGGAATGATGGTGT+TGG - chr3.1:44598820-44598839 MS.gene94952:CDS 50.0%
! AGGAAGAATGGTGATTCGGG+TGG - chr3.1:44598556-44598575 MS.gene94952:CDS 50.0%
! CCACCACCCCTATTTCTCAT+CGG + chr3.1:44599588-44599607 None:intergenic 50.0%
! CCTCAATTTCCTGGTGTTGG+AGG - chr3.1:44599801-44599820 MS.gene94952:CDS 50.0%
! CCTCATCATGCTCTGGTTCA+CGG + chr3.1:44600385-44600404 None:intergenic 50.0%
! GTTCTTCTGAGCGAAGGTAC+AGG - chr3.1:44600123-44600142 MS.gene94952:CDS 50.0%
! TCAATCGGGTTCTGGTGTTC+AGG - chr3.1:44598609-44598628 MS.gene94952:CDS 50.0%
! TTTCCTGGTGTTGGAGGTGT+TGG - chr3.1:44599807-44599826 MS.gene94952:CDS 50.0%
!! AGAAATAGGGGTGGTGGGAT+AGG - chr3.1:44599591-44599610 MS.gene94952:CDS 50.0%
!! ATTGCTATTGGTGGTGGAGG+AGG - chr3.1:44599018-44599037 MS.gene94952:CDS 50.0%
!! CAACAACACGGTGGTGTTGT+TGG - chr3.1:44598898-44598917 MS.gene94952:CDS 50.0%
!! GGGAATTCTGGAGTTGGATC+GGG - chr3.1:44598727-44598746 MS.gene94952:CDS 50.0%
!! GGGGAATTCTGGAGTTGGAT+CGG - chr3.1:44598726-44598745 MS.gene94952:CDS 50.0%
!! GGTGGTGTTGTTGGAAACGA+TGG - chr3.1:44598907-44598926 MS.gene94952:CDS 50.0%
!! GTTCCAAGTGGTGTTGTTGG+TGG - chr3.1:44598943-44598962 MS.gene94952:CDS 50.0%
!! TACCGGTGGTGGTGGAATTA+GGG - chr3.1:44598750-44598769 MS.gene94952:CDS 50.0%
AACGATCACGTGACCGTGGT+CGG - chr3.1:44600255-44600274 MS.gene94952:CDS 55.0%
AGAACCGGACCAGTCCCTTT+CGG + chr3.1:44600108-44600127 None:intergenic 55.0%
AGCATGATGAGGAGTGGGAG+CGG - chr3.1:44600393-44600412 MS.gene94952:CDS 55.0%
AGGGTTGGAGGAAATGGACC+TGG - chr3.1:44598985-44599004 MS.gene94952:CDS 55.0%
ATCGTGAGCGGGACAGATAC+AGG - chr3.1:44600318-44600337 MS.gene94952:CDS 55.0%
ATGCCCCAATCGGGTATGGA+TGG - chr3.1:44599903-44599922 MS.gene94952:CDS 55.0%
ATGGGGATGATGCCCCAATC+GGG - chr3.1:44599894-44599913 MS.gene94952:CDS 55.0%
CAGCAGCAACAACAACACGG+TGG - chr3.1:44598889-44598908 MS.gene94952:CDS 55.0%
CCACCACCAACAACACCACT+TGG + chr3.1:44598949-44598968 None:intergenic 55.0%
CCGATGAGAAATAGGGGTGG+TGG - chr3.1:44599585-44599604 MS.gene94952:CDS 55.0%
CCGTGAACCAGAGCATGATG+AGG - chr3.1:44600382-44600401 MS.gene94952:CDS 55.0%
CGGATCCAAATATGGGCGGA+TGG - chr3.1:44599946-44599965 MS.gene94952:CDS 55.0%
GATGATGCCCCAATCGGGTA+TGG - chr3.1:44599899-44599918 MS.gene94952:CDS 55.0%
GCTGCAACTGCCTGTAAGGA+AGG - chr3.1:44599243-44599262 MS.gene94952:CDS 55.0%
GGAAGAGGGATGCCTGTGAA+TGG - chr3.1:44599870-44599889 MS.gene94952:CDS 55.0%
GGACCATCCATACCCGATTG+GGG + chr3.1:44599909-44599928 None:intergenic 55.0%
GGGAACAATCCTGGTATGGG+TGG - chr3.1:44599546-44599565 MS.gene94952:CDS 55.0%
GGGTTTAGAGGGGGGAATTC+TGG - chr3.1:44598715-44598734 MS.gene94952:CDS 55.0%
TCACCAACAACACCAGCCAC+CGG + chr3.1:44598637-44598656 None:intergenic 55.0%
TCCCACTCCTCATCATGCTC+TGG + chr3.1:44600392-44600411 None:intergenic 55.0%
TCGAGATCGTGAGCGCGAAA+GGG - chr3.1:44600286-44600305 MS.gene94952:CDS 55.0%
TCGTGAGCGGGACAGATACA+GGG - chr3.1:44600319-44600338 MS.gene94952:CDS 55.0%
TGAACCAAACTGCCGGTGGT+GGG - chr3.1:44599370-44599389 MS.gene94952:CDS 55.0%
TGGCCGGATCCAAATATGGG+CGG - chr3.1:44599942-44599961 MS.gene94952:CDS 55.0%
TGGGGTAGAGGGAACAATCC+TGG - chr3.1:44599537-44599556 MS.gene94952:CDS 55.0%
TGGGGTTAACCCGGGAAGAA+GGG - chr3.1:44599389-44599408 MS.gene94952:CDS 55.0%
TGGTGGTCCCATGGGTAGAA+TGG - chr3.1:44599725-44599744 MS.gene94952:CDS 55.0%
TTCTGCCACCCAGCTCTATC+AGG + chr3.1:44600059-44600078 None:intergenic 55.0%
TTCTGGTGTTCAGGATCCGG+TGG - chr3.1:44598618-44598637 MS.gene94952:CDS 55.0%
! CCTGCATTTGGTGGTCCCAT+GGG - chr3.1:44599717-44599736 MS.gene94952:CDS 55.0%
! CTCGAGACTTTTCCCGACCA+CGG + chr3.1:44600271-44600290 None:intergenic 55.0%
! GGGTTCTGGTGTTCAGGATC+CGG - chr3.1:44598615-44598634 MS.gene94952:CDS 55.0%
! GGTAGAATGGCAGGCTTTGG+AGG - chr3.1:44599738-44599757 MS.gene94952:CDS 55.0%
! GGTGAGGGAGTGAAGAGTGT+TGG - chr3.1:44598652-44598671 MS.gene94952:CDS 55.0%
! GTGGACTACTGATGCTGAGC+TGG - chr3.1:44599113-44599132 MS.gene94952:CDS 55.0%
! TCCTGCATTTGGTGGTCCCA+TGG - chr3.1:44599716-44599735 MS.gene94952:CDS 55.0%
! TCTGGAGTTGGATCGGGTAC+CGG - chr3.1:44598733-44598752 MS.gene94952:CDS 55.0%
! TGAGGCATCATCCCCGAGAA+TGG + chr3.1:44599786-44599805 None:intergenic 55.0%
!! AATAGGGGTGGTGGGATAGG+TGG - chr3.1:44599594-44599613 MS.gene94952:CDS 55.0%
!! AGAGGGGGGAATTCTGGAGT+TGG - chr3.1:44598721-44598740 MS.gene94952:CDS 55.0%
!! AGTGGTGTTGTTGGTGGTGG+AGG - chr3.1:44598949-44598968 MS.gene94952:CDS 55.0%
!! ATTGGTGGTGGAGGAGGTGA+AGG - chr3.1:44599024-44599043 MS.gene94952:CDS 55.0%
!! CCAAGTGGTGTTGTTGGTGG+TGG - chr3.1:44598946-44598965 MS.gene94952:CDS 55.0%
!! GAGGGAGTGAAGAGTGTTGG+TGG - chr3.1:44598655-44598674 MS.gene94952:CDS 55.0%
!! GGAGTGAAGAGTGTTGGTGG+TGG - chr3.1:44598658-44598677 MS.gene94952:CDS 55.0%
!! GTACCGGTGGTGGTGGAATT+AGG - chr3.1:44598749-44598768 MS.gene94952:CDS 55.0%
!! GTGGCTGGTGTTGTTGGTGA+GGG - chr3.1:44598637-44598656 MS.gene94952:CDS 55.0%
!! GTGGTGTTGTTGGTGGTGGA+GGG - chr3.1:44598950-44598969 MS.gene94952:CDS 55.0%
!! GTTGGAGGTGTTGGTTTGCC+TGG - chr3.1:44599816-44599835 MS.gene94952:CDS 55.0%
!! TGGTGTTGTTGGTGGTGGAG+GGG - chr3.1:44598951-44598970 MS.gene94952:CDS 55.0%
!! TTGGTGGTGGAGGAGGTGAA+GGG - chr3.1:44599025-44599044 MS.gene94952:CDS 55.0%
AAGAAGGGGGCCTGCTGATG+TGG - chr3.1:44599404-44599423 MS.gene94952:CDS 60.0%
ACGATCACGTGACCGTGGTC+GGG - chr3.1:44600256-44600275 MS.gene94952:CDS 60.0%
AGAAGGGGGCCTGCTGATGT+GGG - chr3.1:44599405-44599424 MS.gene94952:CDS 60.0%
AGATCGTGAGCGCGAAAGGG+GGG - chr3.1:44600289-44600308 MS.gene94952:CDS 60.0%
ATGATGAGGAGTGGGAGCGG+GGG - chr3.1:44600396-44600415 MS.gene94952:CDS 60.0%
CAGGTGAACCAAACTGCCGG+TGG - chr3.1:44599366-44599385 MS.gene94952:CDS 60.0%
CATGATGAGGAGTGGGAGCG+GGG - chr3.1:44600395-44600414 MS.gene94952:CDS 60.0%
CCAAATATGGGCGGATGGGG+TGG - chr3.1:44599951-44599970 MS.gene94952:CDS 60.0%
CCACCCCATCCGCCCATATT+TGG + chr3.1:44599954-44599973 None:intergenic 60.0%
CCCATGGGACCACCAAATGC+AGG + chr3.1:44599720-44599739 None:intergenic 60.0%
CGAGATCGTGAGCGCGAAAG+GGG - chr3.1:44600287-44600306 MS.gene94952:CDS 60.0%
CTCGAGATCGTGAGCGCGAA+AGG - chr3.1:44600285-44600304 MS.gene94952:CDS 60.0%
GAACCAAACTGCCGGTGGTG+GGG - chr3.1:44599371-44599390 MS.gene94952:CDS 60.0%
GAGATCGTGAGCGCGAAAGG+GGG - chr3.1:44600288-44600307 MS.gene94952:CDS 60.0%
GATGTGGGAGCTAAGCCTGG+TGG - chr3.1:44599420-44599439 MS.gene94952:CDS 60.0%
GCATGATGAGGAGTGGGAGC+GGG - chr3.1:44600394-44600413 MS.gene94952:CDS 60.0%
GCTGATGTGGGAGCTAAGCC+TGG - chr3.1:44599417-44599436 MS.gene94952:CDS 60.0%
GGCATCATCCCCGAGAATGG+AGG + chr3.1:44599783-44599802 None:intergenic 60.0%
GGCTTAGCTCCCACATCAGC+AGG + chr3.1:44599417-44599436 None:intergenic 60.0%
GGGGTTAACCCGGGAAGAAG+GGG - chr3.1:44599390-44599409 MS.gene94952:CDS 60.0%
GGGTTAACCCGGGAAGAAGG+GGG - chr3.1:44599391-44599410 MS.gene94952:CDS 60.0%
GGTCCCATGGGTAGAATGGC+AGG - chr3.1:44599729-44599748 MS.gene94952:CDS 60.0%
GGTCCGGTTCTTCTGAGCGA+AGG - chr3.1:44600117-44600136 MS.gene94952:CDS 60.0%
GGTCCTCTACCACCCATACC+AGG + chr3.1:44599558-44599577 None:intergenic 60.0%
GTGAACCAAACTGCCGGTGG+TGG - chr3.1:44599369-44599388 MS.gene94952:CDS 60.0%
GTGGGGTTAACCCGGGAAGA+AGG - chr3.1:44599388-44599407 MS.gene94952:CDS 60.0%
TAACCCCACCACCGGCAGTT+TGG + chr3.1:44599377-44599396 None:intergenic 60.0%
TGGTCCGGCACCTCCATTCT+CGG - chr3.1:44599770-44599789 MS.gene94952:CDS 60.0%
! ATCCCCGAGAATGGAGGTGC+CGG + chr3.1:44599777-44599796 None:intergenic 60.0%
! TGCTGAGGGTGCATCATCGG+CGG + chr3.1:44599675-44599694 None:intergenic 60.0%
!! GATCCGGTGGCTGGTGTTGT+TGG - chr3.1:44598631-44598650 MS.gene94952:CDS 60.0%
!! GCAGGCTTTGGAGGCTATCC+CGG - chr3.1:44599747-44599766 MS.gene94952:CDS 60.0%
!! GGATCCGAAAGGGACTGGTC+CGG - chr3.1:44600101-44600120 MS.gene94952:CDS 60.0%
!! GGTGGCTGGTGTTGTTGGTG+AGG - chr3.1:44598636-44598655 MS.gene94952:CDS 60.0%
!! GGTGGTGGGATAGGTGGTAG+AGG - chr3.1:44599600-44599619 MS.gene94952:CDS 60.0%
!! TGAGGAACCTGGTGGTGGCA+GGG - chr3.1:44599974-44599993 MS.gene94952:CDS 60.0%
!! TGGTGGTGGAGGAGGTGAAG+GGG - chr3.1:44599026-44599045 MS.gene94952:CDS 60.0%
CGCGAACGATCACGTGACCG+TGG - chr3.1:44600251-44600270 MS.gene94952:CDS 65.0%
GGATGGGGTGGTGAGGAACC+TGG - chr3.1:44599963-44599982 MS.gene94952:CDS 65.0%
GGGGGATCGAGATCGTGAGC+GGG - chr3.1:44600307-44600326 MS.gene94952:CDS 65.0%
GGGGGGATCGAGATCGTGAG+CGG - chr3.1:44600306-44600325 MS.gene94952:CDS 65.0%
GGTCCGGCACCTCCATTCTC+GGG - chr3.1:44599771-44599790 MS.gene94952:CDS 65.0%
GGTGGTGAGGAACCTGGTGG+TGG - chr3.1:44599969-44599988 MS.gene94952:CDS 65.0%
GGTGTTCAGGATCCGGTGGC+TGG - chr3.1:44598622-44598641 MS.gene94952:CDS 65.0%
GTCCGGCACCTCCATTCTCG+GGG - chr3.1:44599772-44599791 MS.gene94952:CDS 65.0%
TATGGGCGGATGGGGTGGTG+AGG - chr3.1:44599956-44599975 MS.gene94952:CDS 65.0%
TCAGCAGGCCCCCTTCTTCC+CGG + chr3.1:44599402-44599421 None:intergenic 65.0%
TCCCGGGTTAACCCCACCAC+CGG + chr3.1:44599385-44599404 None:intergenic 65.0%
TGGAGGCTATCCCGGTGGTC+CGG - chr3.1:44599755-44599774 MS.gene94952:CDS 65.0%
TGGGGTGGTGAGGAACCTGG+TGG - chr3.1:44599966-44599985 MS.gene94952:CDS 65.0%
! CTGAGGGTGCATCATCGGCG+GGG + chr3.1:44599673-44599692 None:intergenic 65.0%
! GCTGAGGGTGCATCATCGGC+GGG + chr3.1:44599674-44599693 None:intergenic 65.0%
! GGAGGTGAAGGGGGAGGTGT+TGG - chr3.1:44599036-44599055 MS.gene94952:CDS 65.0%
!! AATGGAGGTGCCGGACCACC+GGG + chr3.1:44599768-44599787 None:intergenic 65.0%
!! GAAGGGGGAGGTGTTGGTGG+TGG - chr3.1:44599042-44599061 MS.gene94952:CDS 65.0%
!! GAATGGAGGTGCCGGACCAC+CGG + chr3.1:44599769-44599788 None:intergenic 65.0%
!! GGAGGTGTTGGTGGTGGAGG+AGG - chr3.1:44599048-44599067 MS.gene94952:CDS 65.0%
!! GGAGTTGGATCGGGTACCGG+TGG - chr3.1:44598736-44598755 MS.gene94952:CDS 65.0%
!! GGCTTTGGAGGCTATCCCGG+TGG - chr3.1:44599750-44599769 MS.gene94952:CDS 65.0%
!! GGTGAAGGGGGAGGTGTTGG+TGG - chr3.1:44599039-44599058 MS.gene94952:CDS 65.0%
!! GGTGGTGGAGGAGGTGAAGG+GGG - chr3.1:44599027-44599046 MS.gene94952:CDS 65.0%
!! GGTGTTGGTGGTGGAGGAGG+TGG - chr3.1:44599051-44599070 MS.gene94952:CDS 65.0%
!! GTGAGGAACCTGGTGGTGGC+AGG - chr3.1:44599973-44599992 MS.gene94952:CDS 65.0%
!! GTTGGATCGGGTACCGGTGG+TGG - chr3.1:44598739-44598758 MS.gene94952:CDS 65.0%
!! GTTGGTGGTGGAGGAGGTGG+TGG - chr3.1:44599054-44599073 MS.gene94952:CDS 65.0%
!! TGCCGGTGGTGGGGTTAACC+CGG - chr3.1:44599380-44599399 MS.gene94952:CDS 65.0%
CAGCAGGCCCCCTTCTTCCC+GGG + chr3.1:44599401-44599420 None:intergenic 70.0%
GGTGGAGGAGGTGAAGGGGG+AGG - chr3.1:44599030-44599049 MS.gene94952:CDS 70.0%
TCTCCAGCCCTGCCACCACC+AGG + chr3.1:44599984-44600003 None:intergenic 70.0%
!! GAACCTGGTGGTGGCAGGGC+TGG - chr3.1:44599978-44599997 MS.gene94952:CDS 70.0%
!! GCCGGTGGTGGGGTTAACCC+GGG - chr3.1:44599381-44599400 MS.gene94952:CDS 70.0%
!! GGATCGGGTACCGGTGGTGG+TGG - chr3.1:44598742-44598761 MS.gene94952:CDS 70.0%
!! GGGGGAGGTGTTGGTGGTGG+AGG - chr3.1:44599045-44599064 MS.gene94952:CDS 70.0%
!! GGTGGTGGAGGAGGTGGTGG+AGG - chr3.1:44599057-44599076 MS.gene94952:CDS 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 44598397 44600526 44598397 ID=MS.gene94952
chr3.1 mRNA 44598397 44600526 44598397 ID=MS.gene94952.t1;Parent=MS.gene94952
chr3.1 exon 44598397 44600526 44598397 ID=MS.gene94952.t1.exon1;Parent=MS.gene94952.t1
chr3.1 CDS 44598397 44600526 44598397 ID=cds.MS.gene94952.t1;Parent=MS.gene94952.t1
Gene Sequence

>MS.gene94952

ATGGATGAAGCTGGTGAGAGTGGAGATCCTATGGATCAGTTCCACCGTAACGAAGCTATATCTGCTGTAGCTGATGATGGTTTTCTTGCTGAAGAAGATGATGATTATGAAGACCTTTACAACGATGTTAATGTTGGTGAAGGTTTTCTTCAATCGTTGAGGAAGAATGGTGATTCGGGTGGTAGAATTGATGGGGTTGATGAGAAGAAGGTTCAATCGGGTTCTGGTGTTCAGGATCCGGTGGCTGGTGTTGTTGGTGAGGGAGTGAAGAGTGTTGGTGGTGGTGATGAATCTAGGGTTTCTGGGTTTCAGAATCAAGGGTTTAGAGGGGGGAATTCTGGAGTTGGATCGGGTACCGGTGGTGGTGGAATTAGGGTTGAATTAGGTCAAGCATCTGGGAAATTGAGTGAAATTGAGGAACAGAGAGGTGGGAATGATGGTGTTGGAGTTCAGGGGATTGTGCAGCAGCAACAACAGCAACAGCAGCAGCAGCAGCAGCAACAACAACACGGTGGTGTTGTTGGAAACGATGGGTTGGTGAGACAAGTTCCAAGTGGTGTTGTTGGTGGTGGAGGGGTTAATCTTAATAGGGTTGGAGGAAATGGACCTGGAAATAATGTTATTGCTATTGGTGGTGGAGGAGGTGAAGGGGGAGGTGTTGGTGGTGGAGGAGGTGGTGGAGGAAGTACTTTGTTATTTGTGGGTGATTTGCATTGGTGGACTACTGATGCTGAGCTGGAAGCTGAGTTATGCAAGTATGGACAAGTGAAGGAGGTGAGGTTTTATGATGAGAAAGCTAGTGGGAAATCCAAAGGGTATTGTCAGGTTGAGTTTTATGAGGCATATGCTGCAACTGCCTGTAAGGAAGGGATGAATGGTCATTCGTTTAATGGGAGGCCGTGTGTTGTTGCTTTTGCGTCGCCTTTTACTGTTAAGAAAATGGGCGAGGCTCAGAATAATAGGAATCAACAGGTGAACCAAACTGCCGGTGGTGGGGTTAACCCGGGAAGAAGGGGGCCTGCTGATGTGGGAGCTAAGCCTGGTGGTAGTAATATTGCAACTGGCGGTAATTATCAAGGTGGAGATGGGAATAATAATAACAACAATAATAATAACAATAGAGGTTATGGAAGAGGTAATTGGGGTAGAGGGAACAATCCTGGTATGGGTGGTAGAGGACCTGTCAATCCGATGAGAAATAGGGGTGGTGGGATAGGTGGTAGAGGTATAATTGGTAATGGTGGAAATGGATTTGGACAGGGTATTGGTGCTGCCCCGCCGATGATGCACCCTCAGCAAATTATGAATCAGGGTTTTGATCCTGCATTTGGTGGTCCCATGGGTAGAATGGCAGGCTTTGGAGGCTATCCCGGTGGTCCGGCACCTCCATTCTCGGGGATGATGCCTCAATTTCCTGGTGTTGGAGGTGTTGGTTTGCCTGGAGTAGCACCTCATGTTAATCCTGCCTTTTTTGGAAGAGGGATGCCTGTGAATGGAATGGGGATGATGCCCCAATCGGGTATGGATGGTCCTAATATGGGAATGTGGCCGGATCCAAATATGGGCGGATGGGGTGGTGAGGAACCTGGTGGTGGCAGGGCTGGAGAGTCAAGTTATGGGGAGGAAGCAGCATCAGACCATCAGTATGGTGAGGTGAATCCTGATAGAGCTGGGTGGCAGAATAATATGAGGGAAAAAGATAGAGGATCCGAAAGGGACTGGTCCGGTTCTTCTGAGCGAAGGTACAGGGATGATAGAGATCAAGGGTATGAGAGAGATGCACCTAGAGAAAAAGATGCCGGACATGATCCTGAATGGCCAGAAAGAAAGCATCGTGATGATAGAGAGGTGGTTCGCGAACGATCACGTGACCGTGGTCGGGAAAAGTCTCGAGATCGTGAGCGCGAAAGGGGGGATCGAGATCGTGAGCGGGACAGATACAGGGAAGATAGGGACAGATATGCTGATCATCATAGGTACAGAGACCGTGAACCAGAGCATGATGAGGAGTGGGAGCGGGGGCGATCGTCTAGAACTCACAGTAAATCAAGATTATCACAGGATGAGGAACACCATTCTAGGTCAAAAGATGCTGATTATGGAAAGAGGAGGCGGCTGACCTCTGAGTAA

Protein sequence

>MS.gene94952.t1

MDEAGESGDPMDQFHRNEAISAVADDGFLAEEDDDYEDLYNDVNVGEGFLQSLRKNGDSGGRIDGVDEKKVQSGSGVQDPVAGVVGEGVKSVGGGDESRVSGFQNQGFRGGNSGVGSGTGGGGIRVELGQASGKLSEIEEQRGGNDGVGVQGIVQQQQQQQQQQQQQQQHGGVVGNDGLVRQVPSGVVGGGGVNLNRVGGNGPGNNVIAIGGGGGEGGGVGGGGGGGGSTLLFVGDLHWWTTDAELEAELCKYGQVKEVRFYDEKASGKSKGYCQVEFYEAYAATACKEGMNGHSFNGRPCVVAFASPFTVKKMGEAQNNRNQQVNQTAGGGVNPGRRGPADVGAKPGGSNIATGGNYQGGDGNNNNNNNNNNRGYGRGNWGRGNNPGMGGRGPVNPMRNRGGGIGGRGIIGNGGNGFGQGIGAAPPMMHPQQIMNQGFDPAFGGPMGRMAGFGGYPGGPAPPFSGMMPQFPGVGGVGLPGVAPHVNPAFFGRGMPVNGMGMMPQSGMDGPNMGMWPDPNMGGWGGEEPGGGRAGESSYGEEAASDHQYGEVNPDRAGWQNNMREKDRGSERDWSGSSERRYRDDRDQGYERDAPREKDAGHDPEWPERKHRDDREVVRERSRDRGREKSRDRERERGDRDRERDRYREDRDRYADHHRYRDREPEHDEEWERGRSSRTHSKSRLSQDEEHHSRSKDADYGKRRRLTSE