Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95200.t1 | XP_013459054.1 | 92.9 | 462 | 12 | 2 | 1 | 441 | 22 | 483 | 4.10E-252 | 880.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95200.t1 | Q8VYG3 | 67.5 | 461 | 128 | 3 | 1 | 439 | 25 | 485 | 3.4e-183 | 642.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95200.t1 | A0A072UTZ1 | 92.9 | 462 | 12 | 2 | 1 | 441 | 22 | 483 | 2.9e-252 | 880.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95200.t1 | MTR_3g023740 | 92.857 | 462 | 12 | 2 | 1 | 441 | 22 | 483 | 0.0 | 890 |
MS.gene95200.t1 | MTR_3g105230 | 84.821 | 448 | 47 | 2 | 1 | 427 | 22 | 469 | 0.0 | 805 |
MS.gene95200.t1 | MTR_5g009970 | 46.476 | 454 | 219 | 6 | 8 | 437 | 40 | 493 | 1.93e-142 | 417 |
MS.gene95200.t1 | MTR_5g010000 | 45.815 | 454 | 222 | 5 | 8 | 437 | 39 | 492 | 6.11e-137 | 402 |
MS.gene95200.t1 | MTR_5g085730 | 43.404 | 470 | 229 | 7 | 8 | 440 | 30 | 499 | 2.78e-130 | 386 |
MS.gene95200.t1 | MTR_3g080190 | 43.305 | 478 | 234 | 6 | 1 | 441 | 32 | 509 | 9.67e-130 | 385 |
MS.gene95200.t1 | MTR_5g093590 | 43.524 | 471 | 228 | 5 | 8 | 440 | 33 | 503 | 1.91e-129 | 384 |
MS.gene95200.t1 | MTR_8g099410 | 43.923 | 469 | 226 | 7 | 6 | 438 | 25 | 492 | 2.20e-128 | 381 |
MS.gene95200.t1 | MTR_3g080810 | 43.478 | 460 | 224 | 7 | 9 | 435 | 35 | 491 | 2.21e-127 | 378 |
MS.gene95200.t1 | MTR_8g099410 | 43.923 | 469 | 226 | 7 | 6 | 438 | 25 | 492 | 5.66e-127 | 381 |
MS.gene95200.t1 | MTR_8g104820 | 43.074 | 462 | 225 | 10 | 9 | 435 | 30 | 488 | 1.20e-125 | 373 |
MS.gene95200.t1 | MTR_3g117500 | 42.950 | 461 | 227 | 8 | 9 | 435 | 24 | 482 | 4.47e-123 | 367 |
MS.gene95200.t1 | MTR_5g009970 | 45.255 | 411 | 201 | 6 | 51 | 437 | 9 | 419 | 1.29e-121 | 361 |
MS.gene95200.t1 | MTR_4g035955 | 42.358 | 458 | 228 | 6 | 8 | 435 | 13 | 464 | 2.88e-118 | 353 |
MS.gene95200.t1 | MTR_3g010330 | 42.457 | 464 | 236 | 6 | 4 | 438 | 20 | 481 | 3.39e-118 | 354 |
MS.gene95200.t1 | MTR_4g035930 | 40.308 | 454 | 243 | 4 | 8 | 435 | 14 | 465 | 2.08e-116 | 349 |
MS.gene95200.t1 | MTR_4g074960 | 41.365 | 469 | 237 | 8 | 8 | 439 | 27 | 494 | 4.86e-116 | 353 |
MS.gene95200.t1 | MTR_4g035975 | 42.004 | 469 | 230 | 12 | 9 | 439 | 27 | 491 | 2.71e-114 | 344 |
MS.gene95200.t1 | MTR_1g037340 | 42.174 | 460 | 234 | 6 | 9 | 438 | 25 | 482 | 5.15e-111 | 335 |
MS.gene95200.t1 | MTR_1g088190 | 42.117 | 463 | 213 | 9 | 9 | 438 | 39 | 479 | 6.70e-111 | 335 |
MS.gene95200.t1 | MTR_5g009970 | 43.622 | 392 | 197 | 6 | 70 | 437 | 1 | 392 | 1.56e-109 | 329 |
MS.gene95200.t1 | MTR_3g113720 | 38.462 | 468 | 245 | 9 | 10 | 439 | 58 | 520 | 2.53e-104 | 320 |
MS.gene95200.t1 | MTR_8g075990 | 37.607 | 468 | 249 | 9 | 10 | 439 | 64 | 526 | 7.59e-92 | 288 |
MS.gene95200.t1 | MTR_5g009970 | 45.062 | 324 | 165 | 4 | 127 | 437 | 1 | 324 | 3.70e-89 | 274 |
MS.gene95200.t1 | MTR_2g028480 | 36.253 | 491 | 242 | 13 | 9 | 440 | 111 | 589 | 3.27e-84 | 270 |
MS.gene95200.t1 | MTR_3g090540 | 33.265 | 490 | 258 | 13 | 8 | 440 | 106 | 583 | 2.11e-77 | 252 |
MS.gene95200.t1 | MTR_3g082440 | 35.438 | 491 | 243 | 17 | 9 | 440 | 116 | 591 | 3.28e-74 | 244 |
MS.gene95200.t1 | MTR_1g088190 | 41.118 | 304 | 126 | 7 | 9 | 280 | 39 | 321 | 1.41e-60 | 201 |
MS.gene95200.t1 | MTR_1g111340 | 51.515 | 165 | 36 | 3 | 215 | 369 | 1 | 131 | 7.10e-42 | 145 |
MS.gene95200.t1 | MTR_7g108925 | 43.709 | 151 | 83 | 2 | 289 | 438 | 50 | 199 | 4.39e-36 | 132 |
MS.gene95200.t1 | MTR_4g128810 | 26.588 | 425 | 201 | 15 | 22 | 440 | 14 | 333 | 4.13e-30 | 120 |
MS.gene95200.t1 | MTR_1g037320 | 40.625 | 192 | 98 | 3 | 70 | 246 | 1 | 191 | 9.73e-29 | 114 |
MS.gene95200.t1 | MTR_1g037320 | 42.623 | 122 | 68 | 2 | 315 | 435 | 169 | 289 | 3.60e-24 | 102 |
MS.gene95200.t1 | MTR_0393s0050 | 43.846 | 130 | 72 | 1 | 288 | 416 | 26 | 155 | 4.66e-26 | 104 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene95200.t1 | AT3G43860 | 67.462 | 461 | 128 | 3 | 1 | 439 | 25 | 485 | 0.0 | 634 |
MS.gene95200.t1 | AT3G43860 | 67.462 | 461 | 128 | 3 | 1 | 439 | 25 | 485 | 0.0 | 634 |
MS.gene95200.t1 | AT4G11050 | 45.396 | 467 | 218 | 7 | 9 | 439 | 26 | 491 | 3.42e-133 | 394 |
MS.gene95200.t1 | AT4G11050 | 45.396 | 467 | 218 | 7 | 9 | 439 | 26 | 491 | 2.23e-132 | 395 |
MS.gene95200.t1 | AT4G11050 | 45.396 | 467 | 218 | 7 | 9 | 439 | 26 | 491 | 2.25e-132 | 395 |
MS.gene95200.t1 | AT4G23560 | 46.035 | 454 | 220 | 6 | 10 | 439 | 24 | 476 | 6.33e-131 | 386 |
MS.gene95200.t1 | AT4G09740 | 45.614 | 456 | 223 | 6 | 8 | 439 | 22 | 476 | 8.67e-130 | 384 |
MS.gene95200.t1 | AT4G02290 | 44.372 | 462 | 222 | 7 | 9 | 438 | 52 | 510 | 4.41e-128 | 380 |
MS.gene95200.t1 | AT1G64390 | 44.325 | 467 | 223 | 7 | 9 | 439 | 25 | 490 | 4.12e-127 | 381 |
MS.gene95200.t1 | AT2G32990 | 43.590 | 468 | 227 | 6 | 6 | 436 | 36 | 503 | 2.04e-126 | 376 |
MS.gene95200.t1 | AT1G02800 | 44.372 | 462 | 220 | 8 | 9 | 438 | 43 | 499 | 4.82e-124 | 370 |
MS.gene95200.t1 | AT1G70710 | 42.672 | 464 | 229 | 9 | 9 | 439 | 28 | 487 | 7.61e-124 | 369 |
MS.gene95200.t1 | AT1G23210 | 42.241 | 464 | 231 | 9 | 9 | 439 | 28 | 487 | 2.93e-121 | 362 |
MS.gene95200.t1 | AT1G22880 | 42.391 | 460 | 233 | 8 | 9 | 439 | 24 | 480 | 1.49e-116 | 350 |
MS.gene95200.t1 | AT1G71380 | 42.391 | 460 | 233 | 8 | 9 | 439 | 24 | 480 | 2.82e-116 | 349 |
MS.gene95200.t1 | AT4G39010 | 40.385 | 468 | 242 | 9 | 7 | 439 | 27 | 492 | 5.00e-114 | 344 |
MS.gene95200.t1 | AT2G44550 | 41.357 | 457 | 236 | 7 | 9 | 435 | 33 | 487 | 2.83e-112 | 339 |
MS.gene95200.t1 | AT2G44540 | 41.087 | 460 | 238 | 7 | 9 | 437 | 33 | 490 | 5.89e-111 | 336 |
MS.gene95200.t1 | AT1G19940 | 41.703 | 458 | 228 | 9 | 9 | 432 | 48 | 500 | 2.11e-110 | 335 |
MS.gene95200.t1 | AT1G19940 | 41.703 | 458 | 228 | 9 | 9 | 432 | 48 | 500 | 2.11e-110 | 335 |
MS.gene95200.t1 | AT2G44560 | 40.998 | 461 | 239 | 7 | 9 | 438 | 33 | 491 | 1.84e-107 | 327 |
MS.gene95200.t1 | AT2G44570 | 41.113 | 467 | 241 | 8 | 4 | 438 | 28 | 492 | 3.39e-107 | 326 |
MS.gene95200.t1 | AT1G48930 | 40.860 | 465 | 238 | 7 | 8 | 436 | 29 | 492 | 2.24e-106 | 328 |
MS.gene95200.t1 | AT4G39000 | 38.065 | 465 | 253 | 5 | 9 | 439 | 25 | 488 | 1.73e-104 | 319 |
MS.gene95200.t1 | AT1G75680 | 41.228 | 456 | 223 | 10 | 10 | 428 | 58 | 505 | 2.56e-102 | 315 |
MS.gene95200.t1 | AT4G38990 | 37.953 | 469 | 245 | 10 | 9 | 435 | 23 | 487 | 1.70e-98 | 304 |
MS.gene95200.t1 | AT4G02290 | 41.147 | 401 | 201 | 7 | 70 | 438 | 1 | 398 | 5.81e-95 | 291 |
MS.gene95200.t1 | AT1G22880 | 40.100 | 399 | 207 | 8 | 70 | 439 | 1 | 396 | 1.45e-90 | 280 |
MS.gene95200.t1 | AT4G39010 | 37.500 | 368 | 195 | 6 | 3 | 336 | 23 | 389 | 1.12e-84 | 265 |
MS.gene95200.t1 | AT5G49720 | 35.845 | 491 | 244 | 15 | 9 | 440 | 108 | 586 | 9.17e-82 | 264 |
MS.gene95200.t1 | AT1G19940 | 39.612 | 361 | 183 | 7 | 9 | 335 | 48 | 407 | 5.33e-76 | 243 |
MS.gene95200.t1 | AT4G24260 | 35.772 | 492 | 243 | 15 | 9 | 440 | 108 | 586 | 6.51e-75 | 246 |
MS.gene95200.t1 | AT1G65610 | 35.656 | 488 | 245 | 16 | 9 | 440 | 116 | 590 | 2.58e-74 | 244 |
MS.gene95200.t1 | AT2G44570 | 39.669 | 363 | 186 | 7 | 4 | 335 | 28 | 388 | 1.27e-72 | 234 |
MS.gene95200.t1 | AT1G22880 | 43.333 | 300 | 140 | 6 | 9 | 280 | 24 | 321 | 2.92e-69 | 223 |
MS.gene95200.t1 | AT4G38990 | 35.435 | 333 | 169 | 6 | 9 | 314 | 23 | 336 | 2.11e-57 | 192 |
MS.gene95200.t1 | AT4G24260 | 32.817 | 387 | 194 | 12 | 9 | 335 | 108 | 488 | 5.91e-44 | 160 |
MS.gene95200.t1 | AT4G24260 | 33.435 | 329 | 156 | 10 | 9 | 280 | 108 | 430 | 4.42e-40 | 149 |
Find 103 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTAGCAAAGCTTGCTTCTT+TGG | 0.193643 | 3.2:-13433361 | MS.gene95200:CDS |
TCTTCGTTTGGTGACAAATT+TGG | 0.202470 | 3.2:+13433558 | None:intergenic |
AAACAGATGGATTACATATT+AGG | 0.203643 | 3.2:-13433663 | MS.gene95200:intron |
TTGTATACTTACTTGCATTT+TGG | 0.219169 | 3.2:+13434127 | None:intergenic |
GGAAACTCCCTCCCAATAAT+AGG | 0.247610 | 3.2:-13435632 | MS.gene95200:CDS |
TCTCCAAGGGACCCTATTAT+TGG | 0.258473 | 3.2:+13435620 | None:intergenic |
ATTGAATAGGTTGACCTATC+AGG | 0.261586 | 3.2:-13435316 | MS.gene95200:intron |
TCTCCTCAATAAAGCAAAAT+TGG | 0.261612 | 3.2:-13434915 | MS.gene95200:intron |
AGGAGACGGCGAGCATATTT+AGG | 0.264621 | 3.2:+13434932 | None:intergenic |
CCAAATCCACATGAGCTAAC+TGG | 0.270045 | 3.2:-13433489 | MS.gene95200:CDS |
CTAGCAAAGCTTGCTTCTTT+GGG | 0.289529 | 3.2:-13433360 | MS.gene95200:CDS |
AGATCATACATGGTAGGATT+TGG | 0.292392 | 3.2:-13433624 | MS.gene95200:CDS |
GCTGGGGACAATGTGAAATA+TGG | 0.297791 | 3.2:-13435280 | MS.gene95200:CDS |
CCCTTCTACTGCTCCTATTC+AGG | 0.300909 | 3.2:-13434752 | MS.gene95200:CDS |
CCAGTTAGCTCATGTGGATT+TGG | 0.301161 | 3.2:+13433489 | None:intergenic |
TTCTTAGAGGCGCAAAGATC+AGG | 0.334942 | 3.2:-13435654 | MS.gene95200:CDS |
ATTTGCTTGTAAGGACTATC+AGG | 0.344561 | 3.2:+13434400 | None:intergenic |
AAAATCTCTCATCTTCTTAG+AGG | 0.350453 | 3.2:-13435667 | MS.gene95200:CDS |
AACAGATGGATTACATATTA+GGG | 0.358207 | 3.2:-13433662 | MS.gene95200:intron |
GTCAAATTGATTTGCTTGTA+AGG | 0.358875 | 3.2:+13434391 | None:intergenic |
ACCATGTATGATCTTCCTTC+AGG | 0.359145 | 3.2:+13433633 | None:intergenic |
ATTTGAAGCAACAAATGAAA+TGG | 0.361468 | 3.2:-13435197 | MS.gene95200:CDS |
GCCTGAATAGGAGCAGTAGA+AGG | 0.378778 | 3.2:+13434751 | None:intergenic |
CAACAATGGTGATCATCAAC+TGG | 0.379312 | 3.2:+13435085 | None:intergenic |
AGGAAACATGATACTTGTTA+AGG | 0.381146 | 3.2:-13435718 | None:intergenic |
ATATTCAAAATGCCATTAGA+TGG | 0.385203 | 3.2:-13435171 | MS.gene95200:CDS |
TTGGCACTGAAGCACCTCTA+TGG | 0.398776 | 3.2:+13433577 | None:intergenic |
GATCATACATGGTAGGATTT+GGG | 0.403815 | 3.2:-13433623 | MS.gene95200:CDS |
TATGTGCAAGGTTCGGTCTT+AGG | 0.410154 | 3.2:+13433408 | None:intergenic |
CAAATCCACATGAGCTAACT+GGG | 0.410353 | 3.2:-13433488 | MS.gene95200:CDS |
CTCCAAGGGACCCTATTATT+GGG | 0.421960 | 3.2:+13435621 | None:intergenic |
CTATGGTGAGCTTGTGTTGG+TGG | 0.424826 | 3.2:+13433594 | None:intergenic |
GAATTGGCAAAATCTCATAA+AGG | 0.424938 | 3.2:-13434794 | MS.gene95200:CDS |
ATAATCTGTACCCCATCTAA+TGG | 0.430183 | 3.2:+13435159 | None:intergenic |
TCACAGTTACTACATTATCA+TGG | 0.431674 | 3.2:-13435243 | MS.gene95200:CDS |
GGACAGTTTATCTCTTCGTT+TGG | 0.432535 | 3.2:+13433546 | None:intergenic |
AGCTGAAACTTCTGCTGCTA+TGG | 0.438179 | 3.2:-13434987 | MS.gene95200:CDS |
TAGCCATTTCTTAAAGCTTG+TGG | 0.441135 | 3.2:+13433524 | None:intergenic |
GTCCCACAAGCTTTAAGAAA+TGG | 0.446283 | 3.2:-13433527 | MS.gene95200:CDS |
ACATACATTATAGCCTGAAT+AGG | 0.446803 | 3.2:+13434739 | None:intergenic |
TTGAACTTGTCGTTGATGTC+AGG | 0.451159 | 3.2:+13433450 | None:intergenic |
GAAACTCCCTCCCAATAATA+GGG | 0.459252 | 3.2:-13435631 | MS.gene95200:CDS |
TTTGAAGCAACAAATGAAAT+GGG | 0.463240 | 3.2:-13435196 | MS.gene95200:CDS |
TCTCATAAAGGAACCTATGA+TGG | 0.468029 | 3.2:-13434782 | MS.gene95200:CDS |
CTCCCAATAATAGGGTCCCT+TGG | 0.468192 | 3.2:-13435623 | MS.gene95200:CDS |
GGAAACATGATACTTGTTAA+GGG | 0.470689 | 3.2:-13435717 | None:intergenic |
GGAGACTCAGCAATGGATGA+TGG | 0.473201 | 3.2:-13435597 | MS.gene95200:CDS |
AGCCATTTCTTAAAGCTTGT+GGG | 0.474167 | 3.2:+13433525 | None:intergenic |
ACTTGCCAAATATAATCAAA+AGG | 0.476084 | 3.2:-13434198 | MS.gene95200:CDS |
TTGAATAGGTTGACCTATCA+GGG | 0.476637 | 3.2:-13435315 | MS.gene95200:intron |
GAGCTAACTGGGGCCATTGT+TGG | 0.483453 | 3.2:-13433477 | MS.gene95200:CDS |
GAAGGGACATTCTCCATCAT+AGG | 0.487500 | 3.2:+13434769 | None:intergenic |
TATTCAAAATGCCATTAGAT+GGG | 0.489997 | 3.2:-13435170 | MS.gene95200:CDS |
AAGCAAATCAATTTGACTCC+TGG | 0.494274 | 3.2:-13434385 | MS.gene95200:intron |
AGTTGATGATCACCATTGTT+GGG | 0.498423 | 3.2:-13435083 | MS.gene95200:CDS |
CAGTTGATGATCACCATTGT+TGG | 0.502750 | 3.2:-13435084 | MS.gene95200:CDS |
TGCTAGAACACCGGCTGCAA+GGG | 0.505101 | 3.2:+13433377 | None:intergenic |
TAAGGGTCAATTTAATTACA+AGG | 0.517252 | 3.2:-13435700 | MS.gene95200:CDS |
TTGCTGAGTCTCCTCTCCAA+GGG | 0.521853 | 3.2:+13435607 | None:intergenic |
CACAGTTACTACATTATCAT+GGG | 0.526401 | 3.2:-13435242 | MS.gene95200:CDS |
ATTAACATATGTGCAAGGTT+CGG | 0.528389 | 3.2:+13433401 | None:intergenic |
CCTCTATGGTGAGCTTGTGT+TGG | 0.530222 | 3.2:+13433591 | None:intergenic |
TTGCTAGAACACCGGCTGCA+AGG | 0.530745 | 3.2:+13433376 | None:intergenic |
ATGTATAGGATGAGCTAATG+TGG | 0.532805 | 3.2:-13434630 | MS.gene95200:intron |
CTAACTGGGGCCATTGTTGG+TGG | 0.545679 | 3.2:-13433474 | MS.gene95200:CDS |
GCTGGTGGCATATTGTGTAT+TGG | 0.548328 | 3.2:+13434253 | None:intergenic |
TTTGGCAAAATCAAGGAGAT+GGG | 0.548916 | 3.2:+13434145 | None:intergenic |
CTGGGGACAATGTGAAATAT+GGG | 0.550838 | 3.2:-13435279 | MS.gene95200:CDS |
TATGTTAATTCCCTTGCAGC+CGG | 0.552392 | 3.2:-13433387 | MS.gene95200:CDS |
ATTGCTGAGTCTCCTCTCCA+AGG | 0.554564 | 3.2:+13435606 | None:intergenic |
ATGGCCCCAGTTAGCTCATG+TGG | 0.556380 | 3.2:+13433483 | None:intergenic |
AGCAAGCTTTGCTAGAACAC+CGG | 0.556441 | 3.2:+13433368 | None:intergenic |
TCTTAGAGGCGCAAAGATCA+GGG | 0.558185 | 3.2:-13435653 | MS.gene95200:CDS |
CTTGAAGCATTTAAAGCACA+TGG | 0.561349 | 3.2:-13434448 | MS.gene95200:CDS |
GGGTTTATTCATATGAGAGA+TGG | 0.573447 | 3.2:-13434278 | MS.gene95200:CDS |
TATAATCAAAAGGTCAAATG+TGG | 0.574640 | 3.2:-13434188 | MS.gene95200:CDS |
CATGGCTATACATGGCAACA+AGG | 0.579656 | 3.2:-13434600 | MS.gene95200:CDS |
TCCTGAAGGAAGATCATACA+TGG | 0.586107 | 3.2:-13433634 | MS.gene95200:CDS |
GGCTGCAACATGGCTATACA+TGG | 0.586171 | 3.2:-13434608 | MS.gene95200:CDS |
TCAGCTGCAATCTCAGTACC+AGG | 0.587163 | 3.2:+13435004 | None:intergenic |
CCTGAATAGGAGCAGTAGAA+GGG | 0.590602 | 3.2:+13434752 | None:intergenic |
CCAACACAAGCTCACCATAG+AGG | 0.591866 | 3.2:-13433591 | MS.gene95200:CDS |
GATGTCAGGTCCACCAACAA+TGG | 0.594292 | 3.2:+13433464 | None:intergenic |
AGCTAATGTGGGCTGCAACA+TGG | 0.614595 | 3.2:-13434618 | MS.gene95200:CDS |
GAAGGAAGATCATACATGGT+AGG | 0.615068 | 3.2:-13433630 | MS.gene95200:CDS |
GTAGTAACTGTGAATGCCAT+TGG | 0.617815 | 3.2:+13435253 | None:intergenic |
AAGGGACCCTATTATTGGGA+GGG | 0.618747 | 3.2:+13435625 | None:intergenic |
AGTGAACAAGAAAGATGTGC+TGG | 0.624046 | 3.2:+13434235 | None:intergenic |
AATAATAGGGTCCCTTGGAG+AGG | 0.629528 | 3.2:-13435618 | MS.gene95200:CDS |
CAAGGGACCCTATTATTGGG+AGG | 0.629896 | 3.2:+13435624 | None:intergenic |
TGTGAAATATGGGCTACCAA+TGG | 0.631971 | 3.2:-13435269 | MS.gene95200:CDS |
GCTTGTAAGGACTATCAGGA+AGG | 0.637627 | 3.2:+13434404 | None:intergenic |
TGTATAGGATGAGCTAATGT+GGG | 0.640123 | 3.2:-13434629 | MS.gene95200:intron |
TTGGAGAGGAGACTCAGCAA+TGG | 0.645168 | 3.2:-13435604 | MS.gene95200:CDS |
ATTCAAAATGCCATTAGATG+GGG | 0.646428 | 3.2:-13435169 | MS.gene95200:CDS |
AGGGAATTAACATATGTGCA+AGG | 0.651111 | 3.2:+13433396 | None:intergenic |
AACAATGGTGATCATCAACT+GGG | 0.657794 | 3.2:+13435086 | None:intergenic |
TTTCTGGTGGTGCCCAACAA+TGG | 0.671282 | 3.2:+13435071 | None:intergenic |
TGAATAGGTTGACCTATCAG+GGG | 0.682641 | 3.2:-13435314 | MS.gene95200:intron |
GAATAGGTTGACCTATCAGG+GGG | 0.686550 | 3.2:-13435313 | MS.gene95200:intron |
TTAATTGATAGTAACACACC+TGG | 0.700118 | 3.2:-13435022 | MS.gene95200:CDS |
GAACAAGAAAGATGTGCTGG+TGG | 0.714032 | 3.2:+13434238 | None:intergenic |
AAATCCACATGAGCTAACTG+GGG | 0.756843 | 3.2:-13433487 | MS.gene95200:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAAATAATGTATTTTTTCA+AGG | + | chr3.2:13434978-13434997 | None:intergenic | 10.0% |
!!! | TAAATAATGTATTTTTTCAA+GGG | + | chr3.2:13434977-13434996 | None:intergenic | 10.0% |
!!! | AAATAATGTATTTTTTCAAG+GGG | + | chr3.2:13434976-13434995 | None:intergenic | 15.0% |
!!! | TACATATAATCTATTTCTTT+GGG | + | chr3.2:13433950-13433969 | None:intergenic | 15.0% |
!!! | TTGATTTTATTGAATTGAAT+AGG | - | chr3.2:13433738-13433757 | MS.gene95200:intron | 15.0% |
!! | AAGAAATAGATTATATGTAG+AGG | - | chr3.2:13433951-13433970 | MS.gene95200:intron | 20.0% |
!! | ACTAAGAGTGAATTAATATT+GGG | - | chr3.2:13434382-13434401 | MS.gene95200:intron | 20.0% |
!! | ATAAACATATATAATCGTAG+AGG | - | chr3.2:13435302-13435321 | MS.gene95200:CDS | 20.0% |
!! | ATATTTAAGTATGATTATGC+AGG | - | chr3.2:13434765-13434784 | MS.gene95200:CDS | 20.0% |
!! | CTCAAAACAAAATCATTATT+AGG | - | chr3.2:13433520-13433539 | MS.gene95200:CDS | 20.0% |
!! | TTTATCTCTAAATATTAGTG+AGG | - | chr3.2:13433575-13433594 | MS.gene95200:CDS | 20.0% |
!!! | CTACATATAATCTATTTCTT+TGG | + | chr3.2:13433951-13433970 | None:intergenic | 20.0% |
!!! | GATAATTCAACTTTTTCTAA+TGG | - | chr3.2:13433647-13433666 | MS.gene95200:CDS | 20.0% |
!!! | TTTGACCTTTTGATTATATT+TGG | + | chr3.2:13434877-13434896 | None:intergenic | 20.0% |
! | AAATGTACATGTAATTTACC+AGG | + | chr3.2:13434703-13434722 | None:intergenic | 25.0% |
! | AATAGATTATATGTAGAGGT+AGG | - | chr3.2:13433955-13433974 | MS.gene95200:intron | 25.0% |
! | ACGTACCAAATGAATAATTT+GGG | - | chr3.2:13433706-13433725 | MS.gene95200:intron | 25.0% |
! | ACTTGCCAAATATAATCAAA+AGG | - | chr3.2:13434869-13434888 | MS.gene95200:intron | 25.0% |
! | ATAGATTATATGTAGAGGTA+GGG | - | chr3.2:13433956-13433975 | MS.gene95200:intron | 25.0% |
! | ATATGCCCAAATTATTCATT+TGG | + | chr3.2:13433714-13433733 | None:intergenic | 25.0% |
! | ATATTCAAAATGCCATTAGA+TGG | - | chr3.2:13433896-13433915 | MS.gene95200:intron | 25.0% |
! | ATTGAAGTAACCTATAGTAT+TGG | - | chr3.2:13434199-13434218 | MS.gene95200:CDS | 25.0% |
! | CACTAAGAGTGAATTAATAT+TGG | - | chr3.2:13434381-13434400 | MS.gene95200:intron | 25.0% |
! | TAAGGGTCAATTTAATTACA+AGG | - | chr3.2:13433367-13433386 | MS.gene95200:CDS | 25.0% |
! | TACGTACCAAATGAATAATT+TGG | - | chr3.2:13433705-13433724 | MS.gene95200:intron | 25.0% |
! | TATAATCAAAAGGTCAAATG+TGG | - | chr3.2:13434879-13434898 | MS.gene95200:intron | 25.0% |
! | TATATATTATCAAGCAGACT+TGG | - | chr3.2:13435012-13435031 | MS.gene95200:CDS | 25.0% |
! | TATTCAAAATGCCATTAGAT+GGG | - | chr3.2:13433897-13433916 | MS.gene95200:intron | 25.0% |
! | TTAATGTGATGCATATGTAT+AGG | - | chr3.2:13434423-13434442 | MS.gene95200:CDS | 25.0% |
!! | ATTTGAAGCAACAAATGAAA+TGG | - | chr3.2:13433870-13433889 | MS.gene95200:intron | 25.0% |
!! | TTGTATACTTACTTGCATTT+TGG | + | chr3.2:13434943-13434962 | None:intergenic | 25.0% |
!! | TTTGAAGCAACAAATGAAAT+GGG | - | chr3.2:13433871-13433890 | MS.gene95200:intron | 25.0% |
!!! | AAACAGATGGATTACATATT+AGG | - | chr3.2:13435404-13435423 | MS.gene95200:intron | 25.0% |
!!! | AACAGATGGATTACATATTA+GGG | - | chr3.2:13435405-13435424 | MS.gene95200:intron | 25.0% |
!!! | ATACCAATTTTGCTTTATTG+AGG | + | chr3.2:13434158-13434177 | None:intergenic | 25.0% |
!!! | TTACATTTTGAAGGTCAAAA+AGG | - | chr3.2:13434595-13434614 | MS.gene95200:CDS | 25.0% |
AAAATCTCTCATCTTCTTAG+AGG | - | chr3.2:13433400-13433419 | MS.gene95200:CDS | 30.0% | |
ACATACATTATAGCCTGAAT+AGG | + | chr3.2:13434331-13434350 | None:intergenic | 30.0% | |
AGCATATGTAATACCAACTT+TGG | + | chr3.2:13435330-13435349 | None:intergenic | 30.0% | |
AGTTGCTATAACATGTGATT+TGG | - | chr3.2:13435268-13435287 | MS.gene95200:CDS | 30.0% | |
ATATTAGGGAAAAATCCTGA+AGG | - | chr3.2:13435419-13435438 | MS.gene95200:intron | 30.0% | |
ATATTCCCAACCAATACTAT+AGG | + | chr3.2:13434212-13434231 | None:intergenic | 30.0% | |
ATCAACATGCCTAAAAACAA+TGG | + | chr3.2:13434115-13434134 | None:intergenic | 30.0% | |
ATCACATGTTATAGCAACTT+TGG | + | chr3.2:13435267-13435286 | None:intergenic | 30.0% | |
ATTAACATATGTGCAAGGTT+CGG | + | chr3.2:13435669-13435688 | None:intergenic | 30.0% | |
ATTCAAAATGCCATTAGATG+GGG | - | chr3.2:13433898-13433917 | MS.gene95200:intron | 30.0% | |
CACAGTTACTACATTATCAT+GGG | - | chr3.2:13433825-13433844 | MS.gene95200:intron | 30.0% | |
CACTCTTAGTGAATTAAGAA+AGG | + | chr3.2:13434372-13434391 | None:intergenic | 30.0% | |
GAATTGGCAAAATCTCATAA+AGG | - | chr3.2:13434273-13434292 | MS.gene95200:CDS | 30.0% | |
TAGAGTGACTATCTAATACT+TGG | - | chr3.2:13435376-13435395 | MS.gene95200:intron | 30.0% | |
TAGATTATATGTAGAGGTAG+GGG | - | chr3.2:13433957-13433976 | MS.gene95200:intron | 30.0% | |
TCACAGTTACTACATTATCA+TGG | - | chr3.2:13433824-13433843 | MS.gene95200:intron | 30.0% | |
TCTCCTCAATAAAGCAAAAT+TGG | - | chr3.2:13434152-13434171 | MS.gene95200:CDS | 30.0% | |
TTAAGTATGATTATGCAGGT+GGG | - | chr3.2:13434769-13434788 | MS.gene95200:CDS | 30.0% | |
TTTAAGTATGATTATGCAGG+TGG | - | chr3.2:13434768-13434787 | MS.gene95200:CDS | 30.0% | |
! | AGTATGATGTTGCAGTTTTA+GGG | - | chr3.2:13435153-13435172 | MS.gene95200:CDS | 30.0% |
! | AGTTGGTATTACATATGCTT+TGG | - | chr3.2:13435331-13435350 | MS.gene95200:intron | 30.0% |
! | CTCTTTGTCTTCATATTTTC+TGG | + | chr3.2:13434015-13434034 | None:intergenic | 30.0% |
! | TAGTATGATGTTGCAGTTTT+AGG | - | chr3.2:13435152-13435171 | MS.gene95200:CDS | 30.0% |
! | TTAATTGATAGTAACACACC+TGG | - | chr3.2:13434045-13434064 | MS.gene95200:intron | 30.0% |
! | TTTGTCTTCATATTTTCTGG+TGG | + | chr3.2:13434012-13434031 | None:intergenic | 30.0% |
!! | AAGTAACCTATAGTATTGGT+TGG | - | chr3.2:13434203-13434222 | MS.gene95200:CDS | 30.0% |
!! | AGTAACCTATAGTATTGGTT+GGG | - | chr3.2:13434204-13434223 | MS.gene95200:CDS | 30.0% |
!! | ATTTTGCTTTATTGAGGAGA+CGG | + | chr3.2:13434152-13434171 | None:intergenic | 30.0% |
!! | GTCAAATTGATTTGCTTGTA+AGG | + | chr3.2:13434679-13434698 | None:intergenic | 30.0% |
AACAATGGTGATCATCAACT+GGG | + | chr3.2:13433984-13434003 | None:intergenic | 35.0% | |
AAGCAAATCAATTTGACTCC+TGG | - | chr3.2:13434682-13434701 | MS.gene95200:intron | 35.0% | |
ACTGCAACATCATACTACAT+CGG | + | chr3.2:13435149-13435168 | None:intergenic | 35.0% | |
AGATCATACATGGTAGGATT+TGG | - | chr3.2:13435443-13435462 | MS.gene95200:intron | 35.0% | |
AGCCATTTCTTAAAGCTTGT+GGG | + | chr3.2:13435545-13435564 | None:intergenic | 35.0% | |
AGGGAATTAACATATGTGCA+AGG | + | chr3.2:13435674-13435693 | None:intergenic | 35.0% | |
ATAATCTGTACCCCATCTAA+TGG | + | chr3.2:13433911-13433930 | None:intergenic | 35.0% | |
ATACTTGGATGGTAAACAGA+TGG | - | chr3.2:13435391-13435410 | MS.gene95200:intron | 35.0% | |
ATGTATAGGATGAGCTAATG+TGG | - | chr3.2:13434437-13434456 | MS.gene95200:CDS | 35.0% | |
ATTTGCTTGTAAGGACTATC+AGG | + | chr3.2:13434670-13434689 | None:intergenic | 35.0% | |
CTTGAACTCCAGCATATTTA+AGG | + | chr3.2:13434561-13434580 | None:intergenic | 35.0% | |
GATCATACATGGTAGGATTT+GGG | - | chr3.2:13435444-13435463 | MS.gene95200:intron | 35.0% | |
GGGTTTATTCATATGAGAGA+TGG | - | chr3.2:13434789-13434808 | MS.gene95200:CDS | 35.0% | |
GTGACTATCTAATACTTGGA+TGG | - | chr3.2:13435380-13435399 | MS.gene95200:intron | 35.0% | |
TAGCCATTTCTTAAAGCTTG+TGG | + | chr3.2:13435546-13435565 | None:intergenic | 35.0% | |
TAGTGTAGCAGAATTCAGTT+GGG | - | chr3.2:13434534-13434553 | MS.gene95200:intron | 35.0% | |
TCTCATAAAGGAACCTATGA+TGG | - | chr3.2:13434285-13434304 | MS.gene95200:intron | 35.0% | |
TGTATAGGATGAGCTAATGT+GGG | - | chr3.2:13434438-13434457 | MS.gene95200:CDS | 35.0% | |
TTTGGCAAAATCAAGGAGAT+GGG | + | chr3.2:13434925-13434944 | None:intergenic | 35.0% | |
! | ATTGAATAGGTTGACCTATC+AGG | - | chr3.2:13433751-13433770 | MS.gene95200:intron | 35.0% |
! | CTCACTCAGTTACATTTTGA+AGG | - | chr3.2:13434586-13434605 | MS.gene95200:CDS | 35.0% |
! | CTTGAAGCATTTAAAGCACA+TGG | - | chr3.2:13434619-13434638 | MS.gene95200:CDS | 35.0% |
! | TCTTCGTTTGGTGACAAATT+TGG | + | chr3.2:13435512-13435531 | None:intergenic | 35.0% |
! | TTGAATAGGTTGACCTATCA+GGG | - | chr3.2:13433752-13433771 | MS.gene95200:intron | 35.0% |
! | TTTTGGCAAAATCAAGGAGA+TGG | + | chr3.2:13434926-13434945 | None:intergenic | 35.0% |
!! | AGTTGATGATCACCATTGTT+GGG | - | chr3.2:13433984-13434003 | MS.gene95200:intron | 35.0% |
!! | CTGCTTCTTCCATTGTTTTT+AGG | - | chr3.2:13434103-13434122 | MS.gene95200:intron | 35.0% |
!! | CTTGCATTTTGGCAAAATCA+AGG | + | chr3.2:13434932-13434951 | None:intergenic | 35.0% |
AAATCCACATGAGCTAACTG+GGG | - | chr3.2:13435580-13435599 | MS.gene95200:intron | 40.0% | |
AATCGTAGAGGATCCAAAGT+TGG | - | chr3.2:13435251-13435270 | MS.gene95200:CDS | 40.0% | |
ACCATGTATGATCTTCCTTC+AGG | + | chr3.2:13435437-13435456 | None:intergenic | 40.0% | |
AGTGAACAAGAAAGATGTGC+TGG | + | chr3.2:13434835-13434854 | None:intergenic | 40.0% | |
AGTTGGGACCTTAAATATGC+TGG | - | chr3.2:13434550-13434569 | MS.gene95200:CDS | 40.0% | |
CAAATCCACATGAGCTAACT+GGG | - | chr3.2:13435579-13435598 | MS.gene95200:intron | 40.0% | |
CAACAATGGTGATCATCAAC+TGG | + | chr3.2:13433985-13434004 | None:intergenic | 40.0% | |
CATCATAATATCCCCCTGAT+AGG | + | chr3.2:13433768-13433787 | None:intergenic | 40.0% | |
CGAAAAGCTGCTAGGAAATT+GGG | + | chr3.2:13434254-13434273 | None:intergenic | 40.0% | |
CTAGTGTAGCAGAATTCAGT+TGG | - | chr3.2:13434533-13434552 | MS.gene95200:intron | 40.0% | |
CTGGGGACAATGTGAAATAT+GGG | - | chr3.2:13433788-13433807 | MS.gene95200:intron | 40.0% | |
GAAACTCCCTCCCAATAATA+GGG | - | chr3.2:13433436-13433455 | MS.gene95200:CDS | 40.0% | |
GAAGGAAGATCATACATGGT+AGG | - | chr3.2:13435437-13435456 | MS.gene95200:intron | 40.0% | |
GGACAGTTTATCTCTTCGTT+TGG | + | chr3.2:13435524-13435543 | None:intergenic | 40.0% | |
GTAGTAACTGTGAATGCCAT+TGG | + | chr3.2:13433817-13433836 | None:intergenic | 40.0% | |
TATGTTAATTCCCTTGCAGC+CGG | - | chr3.2:13435680-13435699 | MS.gene95200:CDS | 40.0% | |
TCCTGAAGGAAGATCATACA+TGG | - | chr3.2:13435433-13435452 | MS.gene95200:intron | 40.0% | |
TCGAAAAGCTGCTAGGAAAT+TGG | + | chr3.2:13434255-13434274 | None:intergenic | 40.0% | |
TTGAACTTGTCGTTGATGTC+AGG | + | chr3.2:13435620-13435639 | None:intergenic | 40.0% | |
! | CTAGCAAAGCTTGCTTCTTT+GGG | - | chr3.2:13435707-13435726 | MS.gene95200:CDS | 40.0% |
! | TCTAGCAAAGCTTGCTTCTT+TGG | - | chr3.2:13435706-13435725 | MS.gene95200:CDS | 40.0% |
! | TGAATAGGTTGACCTATCAG+GGG | - | chr3.2:13433753-13433772 | MS.gene95200:intron | 40.0% |
! | TGTGAAATATGGGCTACCAA+TGG | - | chr3.2:13433798-13433817 | MS.gene95200:intron | 40.0% |
! | TTCCTAGCAGCTTTTCGAAT+TGG | - | chr3.2:13434257-13434276 | MS.gene95200:CDS | 40.0% |
!! | ATTGTGGTATGGTGTTGTCA+CGG | + | chr3.2:13435234-13435253 | None:intergenic | 40.0% |
!! | CAGTTGATGATCACCATTGT+TGG | - | chr3.2:13433983-13434002 | MS.gene95200:intron | 40.0% |
!! | GTCCCACAAGCTTTAAGAAA+TGG | - | chr3.2:13435540-13435559 | MS.gene95200:intron | 40.0% |
!!! | TGATGTTGCAGTTTTAGGGA+CGG | - | chr3.2:13435157-13435176 | MS.gene95200:CDS | 40.0% |
AAGGGACCCTATTATTGGGA+GGG | + | chr3.2:13433445-13433464 | None:intergenic | 45.0% | |
AATAATAGGGTCCCTTGGAG+AGG | - | chr3.2:13433449-13433468 | MS.gene95200:CDS | 45.0% | |
ACACCATACCACAATCGTAG+AGG | - | chr3.2:13435239-13435258 | MS.gene95200:CDS | 45.0% | |
AGCAAGCTTTGCTAGAACAC+CGG | + | chr3.2:13435702-13435721 | None:intergenic | 45.0% | |
AGCTGAAACTTCTGCTGCTA+TGG | - | chr3.2:13434080-13434099 | MS.gene95200:intron | 45.0% | |
AGGGGGATATTATGATGCTG+GGG | - | chr3.2:13433771-13433790 | MS.gene95200:intron | 45.0% | |
CAGGGGGATATTATGATGCT+GGG | - | chr3.2:13433770-13433789 | MS.gene95200:intron | 45.0% | |
CATGGCTATACATGGCAACA+AGG | - | chr3.2:13434467-13434486 | MS.gene95200:CDS | 45.0% | |
CCAAATCCACATGAGCTAAC+TGG | - | chr3.2:13435578-13435597 | MS.gene95200:intron | 45.0% | |
CCAGTTAGCTCATGTGGATT+TGG | + | chr3.2:13435581-13435600 | None:intergenic | 45.0% | |
CCTGAATAGGAGCAGTAGAA+GGG | + | chr3.2:13434318-13434337 | None:intergenic | 45.0% | |
CTCCAAGGGACCCTATTATT+GGG | + | chr3.2:13433449-13433468 | None:intergenic | 45.0% | |
CTTTGGATCCTCTACGATTG+TGG | + | chr3.2:13435250-13435269 | None:intergenic | 45.0% | |
GAACAAGAAAGATGTGCTGG+TGG | + | chr3.2:13434832-13434851 | None:intergenic | 45.0% | |
GAAGGGACATTCTCCATCAT+AGG | + | chr3.2:13434301-13434320 | None:intergenic | 45.0% | |
GATCCTCTACGATTGTGGTA+TGG | + | chr3.2:13435245-13435264 | None:intergenic | 45.0% | |
GCTGGGGACAATGTGAAATA+TGG | - | chr3.2:13433787-13433806 | MS.gene95200:intron | 45.0% | |
GCTGGTGGCATATTGTGTAT+TGG | + | chr3.2:13434817-13434836 | None:intergenic | 45.0% | |
GCTTGTAAGGACTATCAGGA+AGG | + | chr3.2:13434666-13434685 | None:intergenic | 45.0% | |
GGAAACTCCCTCCCAATAAT+AGG | - | chr3.2:13433435-13433454 | MS.gene95200:CDS | 45.0% | |
TCAGGGGGATATTATGATGC+TGG | - | chr3.2:13433769-13433788 | MS.gene95200:intron | 45.0% | |
TCTCCAAGGGACCCTATTAT+TGG | + | chr3.2:13433450-13433469 | None:intergenic | 45.0% | |
TGCCAATTCGAAAAGCTGCT+AGG | + | chr3.2:13434262-13434281 | None:intergenic | 45.0% | |
! | GAATAGGTTGACCTATCAGG+GGG | - | chr3.2:13433754-13433773 | MS.gene95200:intron | 45.0% |
! | TATGTGCAAGGTTCGGTCTT+AGG | + | chr3.2:13435662-13435681 | None:intergenic | 45.0% |
! | TCTTAGAGGCGCAAAGATCA+GGG | - | chr3.2:13433414-13433433 | MS.gene95200:CDS | 45.0% |
! | TTCTTAGAGGCGCAAAGATC+AGG | - | chr3.2:13433413-13433432 | MS.gene95200:CDS | 45.0% |
AGGAGACGGCGAGCATATTT+AGG | + | chr3.2:13434138-13434157 | None:intergenic | 50.0% | |
ATTGCTGAGTCTCCTCTCCA+AGG | + | chr3.2:13433464-13433483 | None:intergenic | 50.0% | |
CAAGGGACCCTATTATTGGG+AGG | + | chr3.2:13433446-13433465 | None:intergenic | 50.0% | |
CCAACACAAGCTCACCATAG+AGG | - | chr3.2:13435476-13435495 | MS.gene95200:intron | 50.0% | |
CCCTTCTACTGCTCCTATTC+AGG | - | chr3.2:13434315-13434334 | MS.gene95200:intron | 50.0% | |
CCTCTATGGTGAGCTTGTGT+TGG | + | chr3.2:13435479-13435498 | None:intergenic | 50.0% | |
CTATGGTGAGCTTGTGTTGG+TGG | + | chr3.2:13435476-13435495 | None:intergenic | 50.0% | |
CTCCCAATAATAGGGTCCCT+TGG | - | chr3.2:13433444-13433463 | MS.gene95200:CDS | 50.0% | |
GATGTCAGGTCCACCAACAA+TGG | + | chr3.2:13435606-13435625 | None:intergenic | 50.0% | |
GCCTGAATAGGAGCAGTAGA+AGG | + | chr3.2:13434319-13434338 | None:intergenic | 50.0% | |
GGAGACTCAGCAATGGATGA+TGG | - | chr3.2:13433470-13433489 | MS.gene95200:CDS | 50.0% | |
GGCTGCAACATGGCTATACA+TGG | - | chr3.2:13434459-13434478 | MS.gene95200:CDS | 50.0% | |
TCAGCTGCAATCTCAGTACC+AGG | + | chr3.2:13434066-13434085 | None:intergenic | 50.0% | |
TTGCTGAGTCTCCTCTCCAA+GGG | + | chr3.2:13433463-13433482 | None:intergenic | 50.0% | |
TTGGAGAGGAGACTCAGCAA+TGG | - | chr3.2:13433463-13433482 | MS.gene95200:CDS | 50.0% | |
! | AGCTAATGTGGGCTGCAACA+TGG | - | chr3.2:13434449-13434468 | MS.gene95200:CDS | 50.0% |
! | TTGGCACTGAAGCACCTCTA+TGG | + | chr3.2:13435493-13435512 | None:intergenic | 50.0% |
! | TTTCTGGTGGTGCCCAACAA+TGG | + | chr3.2:13433999-13434018 | None:intergenic | 50.0% |
ATGGCCCCAGTTAGCTCATG+TGG | + | chr3.2:13435587-13435606 | None:intergenic | 55.0% | |
CTAACTGGGGCCATTGTTGG+TGG | - | chr3.2:13435593-13435612 | MS.gene95200:CDS | 55.0% | |
GAGCTAACTGGGGCCATTGT+TGG | - | chr3.2:13435590-13435609 | MS.gene95200:CDS | 55.0% | |
! | TGCTAGAACACCGGCTGCAA+GGG | + | chr3.2:13435693-13435712 | None:intergenic | 55.0% |
! | TTGCTAGAACACCGGCTGCA+AGG | + | chr3.2:13435694-13435713 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 13433356 | 13435733 | 13433356 | ID=MS.gene95200 |
chr3.2 | mRNA | 13433356 | 13435733 | 13433356 | ID=MS.gene95200.t1;Parent=MS.gene95200 |
chr3.2 | exon | 13435584 | 13435733 | 13435584 | ID=MS.gene95200.t1.exon1;Parent=MS.gene95200.t1 |
chr3.2 | CDS | 13435584 | 13435733 | 13435584 | ID=cds.MS.gene95200.t1;Parent=MS.gene95200.t1 |
chr3.2 | exon | 13435146 | 13435329 | 13435146 | ID=MS.gene95200.t1.exon2;Parent=MS.gene95200.t1 |
chr3.2 | CDS | 13435146 | 13435329 | 13435146 | ID=cds.MS.gene95200.t1;Parent=MS.gene95200.t1 |
chr3.2 | exon | 13434916 | 13435112 | 13434916 | ID=MS.gene95200.t1.exon3;Parent=MS.gene95200.t1 |
chr3.2 | CDS | 13434916 | 13435112 | 13434916 | ID=cds.MS.gene95200.t1;Parent=MS.gene95200.t1 |
chr3.2 | exon | 13434745 | 13434822 | 13434745 | ID=MS.gene95200.t1.exon4;Parent=MS.gene95200.t1 |
chr3.2 | CDS | 13434745 | 13434822 | 13434745 | ID=cds.MS.gene95200.t1;Parent=MS.gene95200.t1 |
chr3.2 | exon | 13434539 | 13434644 | 13434539 | ID=MS.gene95200.t1.exon5;Parent=MS.gene95200.t1 |
chr3.2 | CDS | 13434539 | 13434644 | 13434539 | ID=cds.MS.gene95200.t1;Parent=MS.gene95200.t1 |
chr3.2 | exon | 13434386 | 13434508 | 13434386 | ID=MS.gene95200.t1.exon6;Parent=MS.gene95200.t1 |
chr3.2 | CDS | 13434386 | 13434508 | 13434386 | ID=cds.MS.gene95200.t1;Parent=MS.gene95200.t1 |
chr3.2 | exon | 13434139 | 13434302 | 13434139 | ID=MS.gene95200.t1.exon7;Parent=MS.gene95200.t1 |
chr3.2 | CDS | 13434139 | 13434302 | 13434139 | ID=cds.MS.gene95200.t1;Parent=MS.gene95200.t1 |
chr3.2 | exon | 13433356 | 13433679 | 13433356 | ID=MS.gene95200.t1.exon8;Parent=MS.gene95200.t1 |
chr3.2 | CDS | 13433356 | 13433679 | 13433356 | ID=cds.MS.gene95200.t1;Parent=MS.gene95200.t1 |
Gene Sequence |
Protein sequence |