Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002072.01.T01 | XP_003589912.1 | 99.01 | 101 | 1 | 0 | 8 | 108 | 38 | 138 | 1.32E-63 | 219 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002072.01.T01 | Q9FPT1 | 67.961 | 103 | 31 | 2 | 8 | 108 | 34 | 136 | 2.18E-44 | 156 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002072.01.T01 | G7I2I7 | 99.010 | 101 | 1 | 0 | 8 | 108 | 38 | 138 | 6.31e-64 | 219 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048602.01 | MsG0180002072.01 | 0.858416 | 8.365556e-63 | 2.133433e-59 |
| MsG0080048765.01 | MsG0180002072.01 | 0.807314 | 5.368956e-50 | 2.980911e-47 |
| MsG0080049014.01 | MsG0180002072.01 | 0.803889 | 2.810611e-49 | 1.428931e-46 |
| MsG0180000042.01 | MsG0180002072.01 | 0.838000 | 3.728838e-57 | 4.928457e-54 |
| MsG0180000146.01 | MsG0180002072.01 | 0.821905 | 3.148419e-53 | 2.595516e-50 |
| MsG0180000196.01 | MsG0180002072.01 | 0.838211 | 3.289621e-57 | 4.375502e-54 |
| MsG0180000300.01 | MsG0180002072.01 | 0.810182 | 1.308827e-50 | 7.836245e-48 |
| MsG0180000555.01 | MsG0180002072.01 | 0.842429 | 2.599537e-58 | 3.940916e-55 |
| MsG0180000585.01 | MsG0180002072.01 | 0.822468 | 2.330827e-53 | 1.952588e-50 |
| MsG0180000741.01 | MsG0180002072.01 | 0.871585 | 6.111923e-67 | 2.478868e-63 |
| MsG0180001173.01 | MsG0180002072.01 | 0.804314 | 2.292140e-49 | 1.178073e-46 |
| MsG0180001178.01 | MsG0180002072.01 | 0.825042 | 5.815986e-54 | 5.242069e-51 |
| MsG0180001566.01 | MsG0180002072.01 | 0.805952 | 1.041323e-49 | 5.582379e-47 |
| MsG0180001570.01 | MsG0180002072.01 | 0.800491 | 1.406022e-48 | 6.555552e-46 |
| MsG0180002071.01 | MsG0180002072.01 | 0.900266 | 8.698875e-78 | 1.116220e-73 |
| MsG0180002072.01 | MsG0180002894.01 | 0.801656 | 8.124702e-49 | 3.901323e-46 |
| MsG0180002072.01 | MsG0180003167.01 | 0.820797 | 5.673179e-53 | 4.533829e-50 |
| MsG0180002072.01 | MsG0180003303.01 | 0.829665 | 4.533931e-55 | 4.671397e-52 |
| MsG0180002072.01 | MsG0180003444.01 | 0.830059 | 3.634443e-55 | 3.787233e-52 |
| MsG0180002072.01 | MsG0180004372.01 | 0.824616 | 7.330835e-54 | 6.527503e-51 |
| MsG0180002072.01 | MsG0180004462.01 | 0.818141 | 2.288714e-52 | 1.699180e-49 |
| MsG0180002072.01 | MsG0180004598.01 | 0.809748 | 1.623419e-50 | 9.610819e-48 |
| MsG0180002072.01 | MsG0180004797.01 | 0.851489 | 8.587058e-61 | 1.740820e-57 |
| MsG0180002072.01 | MsG0180005228.01 | 0.812525 | 4.058325e-51 | 2.586360e-48 |
| MsG0180002072.01 | MsG0180005504.01 | 0.800244 | 1.578552e-48 | 7.313952e-46 |
| MsG0180002072.01 | MsG0180005985.01 | 0.800610 | 1.329474e-48 | 6.217391e-46 |
| MsG0180002072.01 | MsG0180006023.01 | 0.811409 | 7.103477e-51 | 4.393809e-48 |
| MsG0180002072.01 | MsG0180006128.01 | 0.804095 | 2.545999e-49 | 1.301233e-46 |
| MsG0180002072.01 | MsG0180006186.01 | 0.846626 | 1.930096e-59 | 3.342340e-56 |
| MsG0180002072.01 | MsG0180006207.01 | 0.851565 | 8.167738e-61 | 1.659936e-57 |
| MsG0180002072.01 | MsG0280006341.01 | 0.807933 | 3.968059e-50 | 2.238754e-47 |
| MsG0180002072.01 | MsG0280006367.01 | 0.815619 | 8.426662e-52 | 5.839237e-49 |
| MsG0180002072.01 | MsG0280006432.01 | 0.813209 | 2.874344e-51 | 1.865276e-48 |
| MsG0180002072.01 | MsG0280006976.01 | 0.804647 | 1.953973e-49 | 1.012926e-46 |
| MsG0180002072.01 | MsG0280007072.01 | 0.814176 | 1.760354e-51 | 1.172803e-48 |
| MsG0180002072.01 | MsG0280007087.01 | 0.830429 | 2.951245e-55 | 3.108534e-52 |
| MsG0180002072.01 | MsG0280007564.01 | 0.853520 | 2.263310e-61 | 4.903910e-58 |
| MsG0180002072.01 | MsG0280007818.01 | 0.822769 | 1.983815e-53 | 1.676263e-50 |
| MsG0180002072.01 | MsG0280007819.01 | 0.850550 | 1.579072e-60 | 3.104387e-57 |
| MsG0180002072.01 | MsG0280009448.01 | 0.866112 | 3.616918e-65 | 1.205080e-61 |
| MsG0180002072.01 | MsG0280009748.01 | 0.813463 | 2.527270e-51 | 1.651639e-48 |
| MsG0180002072.01 | MsG0280010287.01 | 0.816561 | 5.189215e-52 | 3.689350e-49 |
| MsG0180002072.01 | MsG0280010614.01 | 0.827070 | 1.916228e-54 | 1.830143e-51 |
| MsG0180002072.01 | MsG0280010932.01 | 0.862778 | 3.981099e-64 | 1.179944e-60 |
| MsG0180002072.01 | MsG0280011075.01 | 0.830234 | 3.294576e-55 | 3.450856e-52 |
| MsG0180002072.01 | MsG0280011085.01 | 0.848060 | 7.793768e-60 | 1.412753e-56 |
| MsG0180002072.01 | MsG0280011201.01 | 0.809561 | 1.780172e-50 | 1.048654e-47 |
| MsG0180002072.01 | MsG0280011285.01 | 0.810729 | 9.973742e-51 | 6.059057e-48 |
| MsG0180002072.01 | MsG0280011293.01 | 0.831821 | 1.343216e-55 | 1.474465e-52 |
| MsG0180002072.01 | MsG0280011336.01 | 0.845841 | 3.157110e-59 | 5.330901e-56 |
| MsG0180002072.01 | MsG0380012033.01 | 0.830449 | 2.918009e-55 | 3.075122e-52 |
| MsG0180002072.01 | MsG0380012124.01 | 0.828025 | 1.130665e-54 | 1.110454e-51 |
| MsG0180002072.01 | MsG0380013363.01 | 0.815526 | 8.838261e-52 | 6.108327e-49 |
| MsG0180002072.01 | MsG0380013548.01 | 0.801827 | 7.492631e-49 | 3.613679e-46 |
| MsG0180002072.01 | MsG0380014138.01 | 0.831499 | 1.612962e-55 | 1.753510e-52 |
| MsG0180002072.01 | MsG0380014489.01 | 0.805937 | 1.048971e-49 | 5.621196e-47 |
| MsG0180002072.01 | MsG0380014573.01 | 0.804261 | 2.351026e-49 | 1.206667e-46 |
| MsG0180002072.01 | MsG0380015436.01 | 0.834823 | 2.398413e-56 | 2.879203e-53 |
| MsG0180002072.01 | MsG0380015713.01 | 0.823529 | 1.319098e-53 | 1.138685e-50 |
| MsG0180002072.01 | MsG0380015787.01 | 0.807695 | 4.458412e-50 | 2.499793e-47 |
| MsG0180002072.01 | MsG0380015924.01 | 0.852843 | 3.538256e-61 | 7.493027e-58 |
| MsG0180002072.01 | MsG0380015980.01 | 0.807615 | 4.634809e-50 | 2.593330e-47 |
| MsG0180002072.01 | MsG0380016209.01 | 0.841519 | 4.524617e-58 | 6.665205e-55 |
| MsG0180002072.01 | MsG0380016397.01 | 0.824145 | 9.460901e-54 | 8.310363e-51 |
| MsG0180002072.01 | MsG0380016561.01 | 0.807559 | 4.765011e-50 | 2.662265e-47 |
| MsG0180002072.01 | MsG0380016617.01 | 0.819288 | 1.256458e-52 | 9.627899e-50 |
| MsG0180002072.01 | MsG0380016909.01 | 0.810719 | 1.002391e-50 | 6.087934e-48 |
| MsG0180002072.01 | MsG0380017045.01 | 0.860028 | 2.748093e-63 | 7.407347e-60 |
| MsG0180002072.01 | MsG0380017077.01 | 0.825641 | 4.196590e-54 | 3.847248e-51 |
| MsG0180002072.01 | MsG0380017139.01 | 0.801609 | 8.305490e-49 | 3.983399e-46 |
| MsG0180002072.01 | MsG0380017452.01 | 0.808136 | 3.592666e-50 | 2.037931e-47 |
| MsG0180002072.01 | MsG0480018640.01 | 0.804202 | 2.418696e-49 | 1.239511e-46 |
| MsG0180002072.01 | MsG0480019493.01 | 0.800609 | 1.330024e-48 | 6.219846e-46 |
| MsG0180002072.01 | MsG0480019816.01 | 0.804103 | 2.536800e-49 | 1.296772e-46 |
| MsG0180002072.01 | MsG0480019927.01 | 0.816178 | 6.320766e-52 | 4.447148e-49 |
| MsG0180002072.01 | MsG0480020465.01 | 0.846092 | 2.699034e-59 | 4.593676e-56 |
| MsG0180002072.01 | MsG0480021900.01 | 0.800468 | 1.421057e-48 | 6.621645e-46 |
| MsG0180002072.01 | MsG0480022016.01 | 0.803455 | 3.457487e-49 | 1.738209e-46 |
| MsG0180002072.01 | MsG0480022169.01 | 0.810524 | 1.104524e-50 | 6.672912e-48 |
| MsG0180002072.01 | MsG0480022261.01 | 0.845836 | 3.167072e-59 | 5.346847e-56 |
| MsG0180002072.01 | MsG0480022318.01 | 0.832757 | 7.879771e-56 | 8.891405e-53 |
| MsG0180002072.01 | MsG0480022479.01 | 0.828112 | 1.077477e-54 | 1.060889e-51 |
| MsG0180002072.01 | MsG0480022552.01 | 0.824035 | 1.003937e-53 | 8.790512e-51 |
| MsG0180002072.01 | MsG0480022719.01 | 0.801625 | 8.241521e-49 | 3.954323e-46 |
| MsG0180002072.01 | MsG0480023024.01 | 0.814556 | 1.450525e-51 | 9.764209e-49 |
| MsG0180002072.01 | MsG0480023412.01 | 0.801060 | 1.075973e-48 | 5.089957e-46 |
| MsG0180002072.01 | MsG0480023460.01 | 0.813823 | 2.105610e-51 | 1.389483e-48 |
| MsG0180002072.01 | MsG0480023873.01 | 0.821430 | 4.053855e-53 | 3.297410e-50 |
| MsG0180002072.01 | MsG0480023932.01 | 0.810473 | 1.132823e-50 | 6.834943e-48 |
| MsG0180002072.01 | MsG0580024563.01 | 0.807161 | 5.786866e-50 | 3.199987e-47 |
| MsG0180002072.01 | MsG0580024618.01 | 0.811550 | 6.619526e-51 | 4.109646e-48 |
| MsG0180002072.01 | MsG0580024682.01 | 0.820607 | 6.273799e-53 | 4.987028e-50 |
| MsG0180002072.01 | MsG0580024770.01 | 0.849921 | 2.371056e-60 | 4.566742e-57 |
| MsG0180002072.01 | MsG0580024960.01 | 0.804241 | 2.373850e-49 | 1.217726e-46 |
| MsG0180002072.01 | MsG0580025127.01 | 0.809784 | 1.594323e-50 | 9.447537e-48 |
| MsG0180002072.01 | MsG0580025128.01 | 0.816117 | 6.524682e-52 | 4.582964e-49 |
| MsG0180002072.01 | MsG0580025184.01 | 0.858732 | 6.732301e-63 | 1.735333e-59 |
| MsG0180002072.01 | MsG0580025758.01 | 0.808415 | 3.131973e-50 | 1.789732e-47 |
| MsG0180002072.01 | MsG0580025907.01 | 0.855685 | 5.344025e-62 | 1.244013e-58 |
| MsG0180002072.01 | MsG0580027745.01 | 0.814049 | 1.877195e-51 | 1.246362e-48 |
| MsG0180002072.01 | MsG0580028747.01 | 0.803031 | 4.232246e-49 | 2.104674e-46 |
| MsG0180002072.01 | MsG0580029036.01 | 0.805168 | 1.520335e-49 | 7.987873e-47 |
| MsG0180002072.01 | MsG0580029208.01 | 0.807827 | 4.178909e-50 | 2.351232e-47 |
| MsG0180002072.01 | MsG0580029278.01 | 0.800400 | 1.467120e-48 | 6.824745e-46 |
| MsG0180002072.01 | MsG0580029348.01 | 0.823613 | 1.260471e-53 | 1.090701e-50 |
| MsG0180002072.01 | MsG0680030321.01 | 0.802811 | 4.700152e-49 | 2.324458e-46 |
| MsG0180002072.01 | MsG0680033302.01 | 0.867442 | 1.364505e-65 | 4.764954e-62 |
| MsG0180002072.01 | MsG0680034067.01 | 0.802599 | 5.197290e-49 | 2.556361e-46 |
| MsG0180002072.01 | MsG0680035681.01 | 0.823973 | 1.037848e-53 | 9.072504e-51 |
| MsG0180002072.01 | MsG0680035737.01 | 0.848204 | 7.113867e-60 | 1.295506e-56 |
| MsG0180002072.01 | MsG0780036018.01 | 0.811783 | 5.890510e-51 | 3.679570e-48 |
| MsG0180002072.01 | MsG0780036836.01 | 0.802803 | 4.717069e-49 | 2.332330e-46 |
| MsG0180002072.01 | MsG0780037975.01 | 0.816711 | 4.802999e-52 | 3.428796e-49 |
| MsG0180002072.01 | MsG0780038401.01 | 0.820862 | 5.479792e-53 | 4.387455e-50 |
| MsG0180002072.01 | MsG0780038602.01 | 0.809594 | 1.751677e-50 | 1.032785e-47 |
| MsG0180002072.01 | MsG0780039249.01 | 0.815842 | 7.513568e-52 | 5.237624e-49 |
| MsG0180002072.01 | MsG0780039655.01 | 0.815318 | 9.829098e-52 | 6.754363e-49 |
| MsG0180002072.01 | MsG0780039845.01 | 0.811405 | 7.116909e-51 | 4.401749e-48 |
| MsG0180002072.01 | MsG0780040488.01 | 0.835289 | 1.829423e-56 | 2.227390e-53 |
| MsG0180002072.01 | MsG0780041033.01 | 0.871408 | 6.990993e-67 | 2.817281e-63 |
| MsG0180002072.01 | MsG0780041245.01 | 0.848232 | 6.989577e-60 | 1.274070e-56 |
| MsG0180002072.01 | MsG0780041305.01 | 0.832301 | 1.022226e-55 | 1.137772e-52 |
| MsG0180002072.01 | MsG0780041371.01 | 0.825314 | 5.016334e-54 | 4.556259e-51 |
| MsG0180002072.01 | MsG0780041667.01 | 0.817734 | 2.828081e-52 | 2.076384e-49 |
| MsG0180002072.01 | MsG0880042783.01 | 0.835645 | 1.487716e-56 | 1.830495e-53 |
| MsG0180002072.01 | MsG0880042983.01 | 0.815463 | 9.126390e-52 | 6.296814e-49 |
| MsG0180002072.01 | MsG0880043145.01 | 0.826627 | 2.445487e-54 | 2.305761e-51 |
| MsG0180002072.01 | MsG0880043750.01 | 0.805978 | 1.028072e-49 | 5.515186e-47 |
| MsG0180002072.01 | MsG0880043921.01 | 0.827868 | 1.233712e-54 | 1.206027e-51 |
| MsG0180002072.01 | MsG0880044574.01 | 0.808122 | 3.616706e-50 | 2.050830e-47 |
| MsG0180002072.01 | MsG0880044917.01 | 0.822027 | 2.949817e-53 | 2.440099e-50 |
| MsG0180002072.01 | MsG0880044950.01 | 0.808614 | 2.840073e-50 | 1.631281e-47 |
| MsG0180002072.01 | MsG0880045372.01 | 0.801431 | 9.031606e-49 | 4.312424e-46 |
| MsG0180002072.01 | MsG0880045429.01 | 0.857354 | 1.728405e-62 | 4.254056e-59 |
| MsG0180002072.01 | MsG0880045841.01 | 0.814400 | 1.570614e-51 | 1.052829e-48 |
| MsG0180002072.01 | MsG0880045936.01 | 0.858452 | 8.158450e-63 | 2.083155e-59 |
| MsG0180002072.01 | MsG0880046020.01 | 0.802739 | 4.863319e-49 | 2.400678e-46 |
| MsG0180002072.01 | MsG0880046643.01 | 0.800035 | 1.740912e-48 | 8.023493e-46 |
| MsG0180002072.01 | MsG0880047293.01 | 0.834924 | 2.261689e-56 | 2.723456e-53 |
| MsG0180002072.01 | MsG0880047497.01 | 0.804323 | 2.282191e-49 | 1.173238e-46 |
| MsG0180002072.01 | MsG0880047745.01 | 0.855290 | 6.968477e-62 | 1.600958e-58 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002072.01.T01 | MTR_1g041240 | 99.010 | 101 | 1 | 0 | 8 | 108 | 38 | 138 | 1.60e-67 | 219 |
| MsG0180002072.01.T01 | MTR_1g041240 | 99.010 | 101 | 1 | 0 | 8 | 108 | 36 | 136 | 1.79e-67 | 219 |
| MsG0180002072.01.T01 | MTR_1g041240 | 99.000 | 100 | 1 | 0 | 9 | 108 | 38 | 137 | 5.68e-67 | 218 |
| MsG0180002072.01.T01 | MTR_3g079840 | 64.078 | 103 | 36 | 1 | 7 | 108 | 35 | 137 | 1.17e-43 | 151 |
| MsG0180002072.01.T01 | MTR_3g079840 | 64.078 | 103 | 36 | 1 | 7 | 108 | 34 | 136 | 1.18e-43 | 151 |
| MsG0180002072.01.T01 | MTR_5g086700 | 66.990 | 103 | 31 | 2 | 7 | 108 | 41 | 141 | 3.39e-43 | 150 |
| MsG0180002072.01.T01 | MTR_5g086700 | 66.990 | 103 | 31 | 2 | 7 | 108 | 41 | 141 | 3.39e-43 | 150 |
| MsG0180002072.01.T01 | MTR_5g091450 | 56.075 | 107 | 41 | 3 | 4 | 108 | 12 | 114 | 3.09e-35 | 127 |
| MsG0180002072.01.T01 | MTR_5g091180 | 49.505 | 101 | 49 | 2 | 10 | 108 | 27 | 127 | 7.73e-28 | 106 |
| MsG0180002072.01.T01 | MTR_5g091550 | 50.588 | 85 | 41 | 1 | 25 | 108 | 15 | 99 | 1.97e-24 | 96.7 |
| MsG0180002072.01.T01 | MTR_5g091550 | 50.588 | 85 | 41 | 1 | 25 | 108 | 15 | 99 | 2.06e-24 | 96.7 |
| MsG0180002072.01.T01 | MTR_1g073800 | 42.683 | 82 | 43 | 3 | 28 | 105 | 48 | 129 | 1.28e-17 | 77.4 |
| MsG0180002072.01.T01 | MTR_1g044450 | 45.122 | 82 | 41 | 3 | 28 | 105 | 64 | 145 | 1.80e-17 | 77.0 |
| MsG0180002072.01.T01 | MTR_1g073790 | 43.902 | 82 | 42 | 3 | 28 | 105 | 61 | 142 | 5.66e-17 | 75.9 |
| MsG0180002072.01.T01 | MTR_1g042160 | 39.080 | 87 | 50 | 2 | 29 | 112 | 13 | 99 | 2.66e-16 | 73.2 |
| MsG0180002072.01.T01 | MTR_8g011730 | 40.698 | 86 | 47 | 2 | 27 | 108 | 12 | 97 | 2.47e-14 | 67.8 |
| MsG0180002072.01.T01 | MTR_7g107160 | 35.632 | 87 | 46 | 1 | 30 | 106 | 131 | 217 | 1.93e-13 | 65.5 |
| MsG0180002072.01.T01 | MTR_7g107200 | 36.905 | 84 | 49 | 2 | 29 | 108 | 13 | 96 | 2.06e-13 | 65.5 |
| MsG0180002072.01.T01 | MTR_3g106700 | 36.082 | 97 | 50 | 3 | 24 | 108 | 401 | 497 | 4.74e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180002072.01.T01 | AT5G06600 | 67.961 | 103 | 31 | 2 | 8 | 108 | 34 | 136 | 2.23e-45 | 156 |
| MsG0180002072.01.T01 | AT5G06600 | 67.961 | 103 | 31 | 2 | 8 | 108 | 33 | 135 | 2.31e-45 | 156 |
| MsG0180002072.01.T01 | AT5G06600 | 67.961 | 103 | 31 | 2 | 8 | 108 | 34 | 136 | 2.41e-45 | 156 |
| MsG0180002072.01.T01 | AT3G11910 | 64.078 | 103 | 35 | 2 | 8 | 108 | 32 | 134 | 8.97e-42 | 146 |
| MsG0180002072.01.T01 | AT3G11910 | 64.078 | 103 | 35 | 2 | 8 | 108 | 32 | 134 | 8.97e-42 | 146 |
| MsG0180002072.01.T01 | AT3G11910 | 64.078 | 103 | 35 | 2 | 8 | 108 | 33 | 135 | 8.98e-42 | 146 |
| MsG0180002072.01.T01 | AT3G11910 | 64.078 | 103 | 35 | 2 | 8 | 108 | 33 | 135 | 8.98e-42 | 146 |
| MsG0180002072.01.T01 | AT3G58250 | 54.217 | 83 | 35 | 2 | 29 | 108 | 10 | 92 | 2.24e-25 | 97.4 |
| MsG0180002072.01.T01 | AT3G58370 | 54.217 | 83 | 36 | 2 | 29 | 109 | 9 | 91 | 2.08e-23 | 92.0 |
| MsG0180002072.01.T01 | AT3G58270 | 49.367 | 79 | 39 | 1 | 28 | 105 | 7 | 85 | 2.58e-20 | 84.3 |
| MsG0180002072.01.T01 | AT3G58270 | 49.367 | 79 | 39 | 1 | 28 | 105 | 7 | 85 | 2.58e-20 | 84.3 |
| MsG0180002072.01.T01 | AT3G58270 | 49.367 | 79 | 39 | 1 | 28 | 105 | 7 | 85 | 2.58e-20 | 84.3 |
| MsG0180002072.01.T01 | AT3G58360 | 51.282 | 78 | 37 | 1 | 29 | 105 | 8 | 85 | 3.59e-20 | 83.2 |
| MsG0180002072.01.T01 | AT3G58410 | 48.000 | 75 | 38 | 1 | 29 | 102 | 8 | 82 | 1.12e-19 | 82.4 |
| MsG0180002072.01.T01 | AT3G58410 | 50.000 | 72 | 35 | 1 | 29 | 99 | 29 | 100 | 2.11e-19 | 81.6 |
| MsG0180002072.01.T01 | AT3G58210 | 46.988 | 83 | 41 | 2 | 28 | 107 | 7 | 89 | 3.33e-19 | 81.3 |
| MsG0180002072.01.T01 | AT2G05410 | 47.561 | 82 | 40 | 2 | 30 | 108 | 9 | 90 | 6.31e-19 | 80.1 |
| MsG0180002072.01.T01 | AT3G58340 | 43.210 | 81 | 45 | 1 | 29 | 108 | 8 | 88 | 1.13e-18 | 79.7 |
| MsG0180002072.01.T01 | AT3G58340 | 43.210 | 81 | 45 | 1 | 29 | 108 | 8 | 88 | 1.20e-18 | 79.3 |
| MsG0180002072.01.T01 | AT3G58350 | 48.780 | 82 | 40 | 2 | 29 | 108 | 8 | 89 | 9.60e-18 | 77.0 |
| MsG0180002072.01.T01 | AT3G58350 | 48.780 | 82 | 40 | 2 | 29 | 108 | 8 | 89 | 9.60e-18 | 77.0 |
| MsG0180002072.01.T01 | AT2G05420 | 44.706 | 85 | 38 | 2 | 30 | 105 | 10 | 94 | 1.17e-17 | 76.6 |
| MsG0180002072.01.T01 | AT1G31390 | 41.758 | 91 | 49 | 2 | 22 | 108 | 1 | 91 | 1.67e-17 | 75.9 |
| MsG0180002072.01.T01 | AT3G44800 | 45.679 | 81 | 42 | 2 | 29 | 107 | 5 | 85 | 8.66e-17 | 74.7 |
| MsG0180002072.01.T01 | AT1G04300 | 45.946 | 74 | 38 | 2 | 28 | 99 | 68 | 141 | 9.51e-17 | 75.1 |
| MsG0180002072.01.T01 | AT3G44790 | 46.341 | 82 | 38 | 3 | 29 | 108 | 5 | 82 | 1.19e-16 | 73.9 |
| MsG0180002072.01.T01 | AT2G01790 | 43.210 | 81 | 42 | 2 | 32 | 108 | 11 | 91 | 4.71e-16 | 72.0 |
| MsG0180002072.01.T01 | AT3G27040 | 43.902 | 82 | 44 | 2 | 29 | 108 | 9 | 90 | 7.42e-16 | 71.2 |
| MsG0180002072.01.T01 | AT5G43560 | 45.946 | 74 | 38 | 2 | 28 | 99 | 69 | 142 | 9.31e-16 | 72.4 |
| MsG0180002072.01.T01 | AT5G43560 | 45.946 | 74 | 38 | 2 | 28 | 99 | 69 | 142 | 9.31e-16 | 72.4 |
| MsG0180002072.01.T01 | AT3G58290 | 36.000 | 100 | 51 | 3 | 21 | 108 | 3 | 101 | 3.13e-15 | 69.7 |
| MsG0180002072.01.T01 | AT3G58260 | 44.444 | 81 | 40 | 3 | 30 | 105 | 9 | 89 | 3.45e-15 | 70.1 |
| MsG0180002072.01.T01 | AT3G58220 | 40.230 | 87 | 48 | 3 | 26 | 108 | 7 | 93 | 3.77e-15 | 70.1 |
| MsG0180002072.01.T01 | AT1G04300 | 43.902 | 82 | 36 | 4 | 28 | 99 | 68 | 149 | 4.08e-15 | 70.5 |
| MsG0180002072.01.T01 | AT3G58220 | 40.230 | 87 | 48 | 3 | 26 | 108 | 7 | 93 | 5.60e-15 | 70.1 |
| MsG0180002072.01.T01 | AT3G58290 | 36.000 | 100 | 51 | 3 | 21 | 108 | 3 | 101 | 6.01e-15 | 68.9 |
| MsG0180002072.01.T01 | AT3G58220 | 40.230 | 87 | 48 | 3 | 26 | 108 | 7 | 93 | 6.82e-15 | 68.6 |
| MsG0180002072.01.T01 | AT3G58220 | 40.230 | 87 | 48 | 3 | 26 | 108 | 7 | 93 | 7.42e-15 | 68.9 |
| MsG0180002072.01.T01 | AT3G58220 | 41.558 | 77 | 41 | 3 | 26 | 98 | 7 | 83 | 8.53e-15 | 69.3 |
| MsG0180002072.01.T01 | AT3G58440 | 45.070 | 71 | 37 | 2 | 29 | 98 | 10 | 79 | 9.20e-15 | 69.3 |
| MsG0180002072.01.T01 | AT5G52330 | 40.244 | 82 | 45 | 3 | 28 | 105 | 19 | 100 | 1.08e-14 | 68.9 |
| MsG0180002072.01.T01 | AT5G52330 | 40.244 | 82 | 45 | 3 | 28 | 105 | 19 | 100 | 1.08e-14 | 68.9 |
| MsG0180002072.01.T01 | AT5G52330 | 40.244 | 82 | 45 | 3 | 28 | 105 | 19 | 100 | 1.08e-14 | 68.9 |
| MsG0180002072.01.T01 | AT3G58200 | 34.831 | 89 | 56 | 2 | 22 | 108 | 1 | 89 | 1.42e-14 | 68.6 |
| MsG0180002072.01.T01 | AT1G31400 | 42.353 | 85 | 43 | 3 | 29 | 108 | 8 | 91 | 1.97e-14 | 67.8 |
| MsG0180002072.01.T01 | AT4G09780 | 36.559 | 93 | 56 | 2 | 20 | 109 | 205 | 297 | 1.48e-13 | 65.9 |
| MsG0180002072.01.T01 | AT4G09780 | 37.500 | 88 | 52 | 2 | 20 | 104 | 205 | 292 | 6.75e-13 | 63.9 |
| MsG0180002072.01.T01 | AT1G04300 | 45.763 | 59 | 31 | 1 | 42 | 99 | 64 | 122 | 7.26e-13 | 63.9 |
| MsG0180002072.01.T01 | AT3G58380 | 38.750 | 80 | 47 | 2 | 29 | 106 | 8 | 87 | 1.03e-12 | 63.2 |
| MsG0180002072.01.T01 | AT3G58400 | 48.214 | 56 | 28 | 1 | 49 | 103 | 24 | 79 | 2.35e-12 | 62.0 |
| MsG0180002072.01.T01 | AT2G42480 | 38.889 | 72 | 42 | 1 | 30 | 99 | 8 | 79 | 6.87e-12 | 61.2 |
| MsG0180002072.01.T01 | AT2G42475 | 40.845 | 71 | 41 | 1 | 30 | 99 | 9 | 79 | 4.96e-11 | 58.5 |
| MsG0180002072.01.T01 | AT2G25330 | 31.132 | 106 | 62 | 5 | 12 | 108 | 28 | 131 | 7.48e-11 | 58.2 |
Find 74 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGGCATACCCTTAGCTTTA+AGG | 0.125254 | 1:+32098595 | None:intergenic |
| AGATCATCAAAATTCTTATT+TGG | 0.166171 | 1:-32098559 | MsG0180002072.01.T01:three_prime_UTR |
| CCTATTATTGGTTCCATGTT+TGG | 0.235242 | 1:-32098747 | MsG0180002072.01.T01:three_prime_UTR |
| AGGAAGACTTGACCTATTAT+TGG | 0.260936 | 1:-32098759 | MsG0180002072.01.T01:three_prime_UTR |
| TCACTATTGGTGGCTATAAA+TGG | 0.267592 | 1:-32099472 | MsG0180002072.01.T01:intron |
| ATTTACATTCAAAACTATTA+AGG | 0.278852 | 1:-32098779 | MsG0180002072.01.T01:three_prime_UTR |
| ATTAAGAAATGAAGGGCAAT+AGG | 0.322084 | 1:-32099022 | MsG0180002072.01.T01:three_prime_UTR |
| CCAAACATGGAACCAATAAT+AGG | 0.326142 | 1:+32098747 | None:intergenic |
| CATTTGACCACACATTTGTT+AGG | 0.327494 | 1:-32098691 | MsG0180002072.01.T01:three_prime_UTR |
| ACCCATTGATTCTGTAGTTA+AGG | 0.339771 | 1:-32098856 | MsG0180002072.01.T01:three_prime_UTR |
| AAGAAATAAATCATACAATA+AGG | 0.348298 | 1:-32098269 | MsG0180002072.01.T01:three_prime_UTR |
| CAGCTTAACTGTGGTCAATC+AGG | 0.357604 | 1:-32099230 | MsG0180002072.01.T01:CDS |
| GACCACACATTTGTTAGGTT+TGG | 0.372462 | 1:-32098686 | MsG0180002072.01.T01:three_prime_UTR |
| GCAATAGGGTCTTGGCAGTT+TGG | 0.384851 | 1:-32099007 | MsG0180002072.01.T01:three_prime_UTR |
| CCCATTGATTCTGTAGTTAA+GGG | 0.388886 | 1:-32098855 | MsG0180002072.01.T01:three_prime_UTR |
| TAGTCTATTTGCTAGAAGTT+GGG | 0.389847 | 1:-32098815 | MsG0180002072.01.T01:three_prime_UTR |
| TATTTATTTAAACTGCTTTG+CGG | 0.390536 | 1:+32098523 | None:intergenic |
| AATTCTTATTTGGCAAATAG+TGG | 0.402862 | 1:-32098549 | MsG0180002072.01.T01:three_prime_UTR |
| TACATTTAGCACCCCACAAA+AGG | 0.403080 | 1:+32099095 | None:intergenic |
| TTATGGCCCTAGGTTATGTT+GGG | 0.403621 | 1:-32098935 | MsG0180002072.01.T01:three_prime_UTR |
| AAATGTATGAGAACCTTAAC+AGG | 0.406463 | 1:-32099079 | MsG0180002072.01.T01:three_prime_UTR |
| TCCCTTAACTACAGAATCAA+TGG | 0.408762 | 1:+32098854 | None:intergenic |
| ATAGTCTATTTGCTAGAAGT+TGG | 0.408777 | 1:-32098816 | MsG0180002072.01.T01:three_prime_UTR |
| ATTATGGCCCTAGGTTATGT+TGG | 0.427819 | 1:-32098936 | MsG0180002072.01.T01:three_prime_UTR |
| GATGCAGGTTCGATGCCTTA+TGG | 0.430192 | 1:-32099274 | MsG0180002072.01.T01:CDS |
| TGGACCACCTAGATTCACTT+TGG | 0.431782 | 1:-32098727 | MsG0180002072.01.T01:three_prime_UTR |
| ACATCGGAATAATGTTTCTT+CGG | 0.432526 | 1:+32099497 | None:intergenic |
| GATAACATTAGAGTAAGTTA+AGG | 0.436361 | 1:-32098881 | MsG0180002072.01.T01:three_prime_UTR |
| TTGATTATGTTGTATTTAAG+TGG | 0.436467 | 1:-32099139 | MsG0180002072.01.T01:three_prime_UTR |
| GCAGTTGAAGATCCGCCAAT+TGG | 0.442781 | 1:-32099557 | MsG0180002072.01.T01:CDS |
| GGACCACCTAGATTCACTTT+GGG | 0.447688 | 1:-32098726 | MsG0180002072.01.T01:three_prime_UTR |
| AGTGTAAAATTAAGAAATGA+AGG | 0.460264 | 1:-32099030 | MsG0180002072.01.T01:three_prime_UTR |
| TCAATTCTACCTTAAAGCTA+AGG | 0.462632 | 1:-32098604 | MsG0180002072.01.T01:three_prime_UTR |
| TGTTCAGCATTGTTCCCCTT+CGG | 0.468250 | 1:+32099322 | None:intergenic |
| AGTAAATATTCCGTCAGAAA+AGG | 0.469439 | 1:-32099202 | MsG0180002072.01.T01:CDS |
| AAGTTACAGAACTCCTGTTA+AGG | 0.473173 | 1:+32099066 | None:intergenic |
| TATATAGATGTTGCAGATGC+AGG | 0.480586 | 1:-32099289 | MsG0180002072.01.T01:CDS |
| TTATGTTGGGTTGAAATACT+AGG | 0.480785 | 1:-32098922 | MsG0180002072.01.T01:three_prime_UTR |
| GTCCATGTGAATCTCCCAAT+TGG | 0.481266 | 1:+32099542 | None:intergenic |
| AACTACTACCAAATACGAAA+AGG | 0.483153 | 1:+32099613 | None:intergenic |
| CAGTTGAAGATCCGCCAATT+GGG | 0.486788 | 1:-32099556 | MsG0180002072.01.T01:CDS |
| AATTGATTTATTATGGCCCT+AGG | 0.489918 | 1:-32098945 | MsG0180002072.01.T01:three_prime_UTR |
| TTAAGAAATGAAGGGCAATA+GGG | 0.492539 | 1:-32099021 | MsG0180002072.01.T01:three_prime_UTR |
| TCTAGATATATTGCTTTGAC+TGG | 0.493016 | 1:-32098982 | MsG0180002072.01.T01:three_prime_UTR |
| GCAAGAACCAATGTTGAAGT+TGG | 0.494866 | 1:+32098634 | None:intergenic |
| TTAGCTTCCAACTTCAACAT+TGG | 0.498636 | 1:-32098641 | MsG0180002072.01.T01:three_prime_UTR |
| CCCTTAACTACAGAATCAAT+GGG | 0.498655 | 1:+32098855 | None:intergenic |
| AATGAAGGGCAATAGGGTCT+TGG | 0.513119 | 1:-32099015 | MsG0180002072.01.T01:three_prime_UTR |
| CAGGTTCGATGCCTTATGGT+TGG | 0.516574 | 1:-32099270 | MsG0180002072.01.T01:CDS |
| GACTAACCCAAAGTGAATCT+AGG | 0.533462 | 1:+32098720 | None:intergenic |
| GCAAATCTAGTCCAACCATA+AGG | 0.541036 | 1:+32099259 | None:intergenic |
| AGTCTATTTGCTAGAAGTTG+GGG | 0.550315 | 1:-32098814 | MsG0180002072.01.T01:three_prime_UTR |
| TAGTTAAGGGATTAATCAGA+TGG | 0.555360 | 1:-32098842 | MsG0180002072.01.T01:three_prime_UTR |
| ACATTTAGCACCCCACAAAA+GGG | 0.564608 | 1:+32099096 | None:intergenic |
| CAATTCTACCTTAAAGCTAA+GGG | 0.570953 | 1:-32098603 | MsG0180002072.01.T01:three_prime_UTR |
| ATTTCAACCCAACATAACCT+AGG | 0.574775 | 1:+32098928 | None:intergenic |
| GAATCTAGGTGGTCCAAACA+TGG | 0.577464 | 1:+32098734 | None:intergenic |
| CGCCAATTGGGAGATTCACA+TGG | 0.581165 | 1:-32099544 | MsG0180002072.01.T01:CDS |
| ATAAATCATACAATAAGGAA+AGG | 0.595898 | 1:-32098264 | None:intergenic |
| GCGGATACTGATCTTTCCGA+AGG | 0.601985 | 1:-32099338 | MsG0180002072.01.T01:CDS |
| CACAAGTACAGTGGATGCTG+TGG | 0.605419 | 1:-32099579 | MsG0180002072.01.T01:CDS |
| TGATCTGATATAAGTAACAC+TGG | 0.606174 | 1:+32098576 | None:intergenic |
| CGGATACTGATCTTTCCGAA+GGG | 0.607412 | 1:-32099337 | MsG0180002072.01.T01:CDS |
| CATGTGAATCTCCCAATTGG+CGG | 0.608755 | 1:+32099545 | None:intergenic |
| TTAAGGGATTAATCAGATGG+AGG | 0.631292 | 1:-32098839 | MsG0180002072.01.T01:three_prime_UTR |
| AGCTAAACATAACAAATGTG+TGG | 0.633109 | 1:+32098658 | None:intergenic |
| GTGTAAAATTAAGAAATGAA+GGG | 0.635875 | 1:-32099029 | MsG0180002072.01.T01:three_prime_UTR |
| TGCACAGTTCAGCTTAACTG+TGG | 0.636127 | 1:-32099239 | MsG0180002072.01.T01:CDS |
| TTTCAACCCAACATAACCTA+GGG | 0.640026 | 1:+32098929 | None:intergenic |
| AGCAGAAAACACAAGTACAG+TGG | 0.653432 | 1:-32099588 | MsG0180002072.01.T01:CDS |
| AGCCAAACCTAACAAATGTG+TGG | 0.661588 | 1:+32098684 | None:intergenic |
| GCCACCAATAGTGAAAACAT+CGG | 0.685681 | 1:+32099481 | None:intergenic |
| GGATACTGATCTTTCCGAAG+GGG | 0.700894 | 1:-32099336 | MsG0180002072.01.T01:CDS |
| TAACCCAAAGTGAATCTAGG+TGG | 0.721818 | 1:+32098723 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATTGAATATTATACA+TGG | + | Chr1:32098467-32098486 | None:intergenic | 10.0% |
| !! | AAGAAATAAATCATACAATA+AGG | - | Chr1:32099615-32099634 | MsG0180002072.01.T01:CDS | 15.0% |
| !! | ATTTACATTCAAAACTATTA+AGG | - | Chr1:32099105-32099124 | MsG0180002072.01.T01:three_prime_UTR | 15.0% |
| !!! | CTTTTGAAATTGATTTATTA+TGG | - | Chr1:32098932-32098951 | MsG0180002072.01.T01:three_prime_UTR | 15.0% |
| !! | AGATCATCAAAATTCTTATT+TGG | - | Chr1:32099325-32099344 | MsG0180002072.01.T01:CDS | 20.0% |
| !! | AGTGTAAAATTAAGAAATGA+AGG | - | Chr1:32098854-32098873 | MsG0180002072.01.T01:three_prime_UTR | 20.0% |
| !! | GTGTAAAATTAAGAAATGAA+GGG | - | Chr1:32098855-32098874 | MsG0180002072.01.T01:three_prime_UTR | 20.0% |
| !! | TATTTATTTAAACTGCTTTG+CGG | + | Chr1:32099364-32099383 | None:intergenic | 20.0% |
| !! | TTGATTATGTTGTATTTAAG+TGG | - | Chr1:32098745-32098764 | MsG0180002072.01.T01:three_prime_UTR | 20.0% |
| !!! | GTTTTGAATGTAAATTTTCT+TGG | + | Chr1:32099100-32099119 | None:intergenic | 20.0% |
| !!! | TTATATTGATTTAAACATGC+AGG | - | Chr1:32098524-32098543 | MsG0180002072.01.T01:three_prime_UTR | 20.0% |
| ! | GATAACATTAGAGTAAGTTA+AGG | - | Chr1:32099003-32099022 | MsG0180002072.01.T01:three_prime_UTR | 25.0% |
| ! | TTCAATATTTATGCGTATCA+CGG | - | Chr1:32098476-32098495 | MsG0180002072.01.T01:three_prime_UTR | 25.0% |
| !! | AATTCTTATTTGGCAAATAG+TGG | - | Chr1:32099335-32099354 | MsG0180002072.01.T01:CDS | 25.0% |
| AAATGTATGAGAACCTTAAC+AGG | - | Chr1:32098805-32098824 | MsG0180002072.01.T01:three_prime_UTR | 30.0% | |
| AACTACTACCAAATACGAAA+AGG | + | Chr1:32098274-32098293 | None:intergenic | 30.0% | |
| ACATCGGAATAATGTTTCTT+CGG | + | Chr1:32098390-32098409 | None:intergenic | 30.0% | |
| AGCTAAACATAACAAATGTG+TGG | + | Chr1:32099229-32099248 | None:intergenic | 30.0% | |
| AGTAAATATTCCGTCAGAAA+AGG | - | Chr1:32098682-32098701 | MsG0180002072.01.T01:three_prime_UTR | 30.0% | |
| ATTAAGAAATGAAGGGCAAT+AGG | - | Chr1:32098862-32098881 | MsG0180002072.01.T01:three_prime_UTR | 30.0% | |
| CAATTCTACCTTAAAGCTAA+GGG | - | Chr1:32099281-32099300 | MsG0180002072.01.T01:CDS | 30.0% | |
| TAGTTAAGGGATTAATCAGA+TGG | - | Chr1:32099042-32099061 | MsG0180002072.01.T01:intron | 30.0% | |
| TCAATATTTATGCGTATCAC+GGG | - | Chr1:32098477-32098496 | MsG0180002072.01.T01:three_prime_UTR | 30.0% | |
| TCAATTCTACCTTAAAGCTA+AGG | - | Chr1:32099280-32099299 | MsG0180002072.01.T01:CDS | 30.0% | |
| TCTAGATATATTGCTTTGAC+TGG | - | Chr1:32098902-32098921 | MsG0180002072.01.T01:three_prime_UTR | 30.0% | |
| TGATCTGATATAAGTAACAC+TGG | + | Chr1:32099311-32099330 | None:intergenic | 30.0% | |
| TTAAGAAATGAAGGGCAATA+GGG | - | Chr1:32098863-32098882 | MsG0180002072.01.T01:three_prime_UTR | 30.0% | |
| ! | AATTGATTTATTATGGCCCT+AGG | - | Chr1:32098939-32098958 | MsG0180002072.01.T01:three_prime_UTR | 30.0% |
| ! | AGAAGAATAACCTTTTCTGA+CGG | + | Chr1:32098695-32098714 | None:intergenic | 30.0% |
| ! | ATAGTCTATTTGCTAGAAGT+TGG | - | Chr1:32099068-32099087 | MsG0180002072.01.T01:intron | 30.0% |
| ! | TAGTCTATTTGCTAGAAGTT+GGG | - | Chr1:32099069-32099088 | MsG0180002072.01.T01:intron | 30.0% |
| ! | TATTCCGATGTTTTCACTAT+TGG | - | Chr1:32098399-32098418 | MsG0180002072.01.T01:three_prime_UTR | 30.0% |
| !! | TATTGATTTAAACATGCAGG+CGG | - | Chr1:32098527-32098546 | MsG0180002072.01.T01:three_prime_UTR | 30.0% |
| !! | TTATGTTGGGTTGAAATACT+AGG | - | Chr1:32098962-32098981 | MsG0180002072.01.T01:three_prime_UTR | 30.0% |
| AAGTTACAGAACTCCTGTTA+AGG | + | Chr1:32098821-32098840 | None:intergenic | 35.0% | |
| AATATTTATGCGTATCACGG+GGG | - | Chr1:32098479-32098498 | MsG0180002072.01.T01:three_prime_UTR | 35.0% | |
| AGGAAGACTTGACCTATTAT+TGG | - | Chr1:32099125-32099144 | MsG0180002072.01.T01:three_prime_UTR | 35.0% | |
| ATTTCAACCCAACATAACCT+AGG | + | Chr1:32098959-32098978 | None:intergenic | 35.0% | |
| CAATATTTATGCGTATCACG+GGG | - | Chr1:32098478-32098497 | MsG0180002072.01.T01:three_prime_UTR | 35.0% | |
| CATTTGACCACACATTTGTT+AGG | - | Chr1:32099193-32099212 | MsG0180002072.01.T01:CDS | 35.0% | |
| CCAAACATGGAACCAATAAT+AGG | + | Chr1:32099140-32099159 | None:intergenic | 35.0% | |
| CCCTTAACTACAGAATCAAT+GGG | + | Chr1:32099032-32099051 | None:intergenic | 35.0% | |
| TATATAGATGTTGCAGATGC+AGG | - | Chr1:32098595-32098614 | MsG0180002072.01.T01:three_prime_UTR | 35.0% | |
| TCCCTTAACTACAGAATCAA+TGG | + | Chr1:32099033-32099052 | None:intergenic | 35.0% | |
| TTAAGGGATTAATCAGATGG+AGG | - | Chr1:32099045-32099064 | MsG0180002072.01.T01:intron | 35.0% | |
| TTAGCTTCCAACTTCAACAT+TGG | - | Chr1:32099243-32099262 | MsG0180002072.01.T01:CDS | 35.0% | |
| TTTCAACCCAACATAACCTA+GGG | + | Chr1:32098958-32098977 | None:intergenic | 35.0% | |
| ! | AGTCTATTTGCTAGAAGTTG+GGG | - | Chr1:32099070-32099089 | MsG0180002072.01.T01:intron | 35.0% |
| ! | GGACTATTGACAATTTTTCG+AGG | - | Chr1:32098361-32098380 | MsG0180002072.01.T01:three_prime_UTR | 35.0% |
| ! | TCACTATTGGTGGCTATAAA+TGG | - | Chr1:32098412-32098431 | MsG0180002072.01.T01:three_prime_UTR | 35.0% |
| !! | ACCCATTGATTCTGTAGTTA+AGG | - | Chr1:32099028-32099047 | MsG0180002072.01.T01:three_prime_UTR | 35.0% |
| !! | CCCATTGATTCTGTAGTTAA+GGG | - | Chr1:32099029-32099048 | MsG0180002072.01.T01:three_prime_UTR | 35.0% |
| !! | CCTATTATTGGTTCCATGTT+TGG | - | Chr1:32099137-32099156 | MsG0180002072.01.T01:three_prime_UTR | 35.0% |
| !! | TGAAATTTGCTCCCTTTTGT+GGG | - | Chr1:32098777-32098796 | MsG0180002072.01.T01:three_prime_UTR | 35.0% |
| ACATTTAGCACCCCACAAAA+GGG | + | Chr1:32098791-32098810 | None:intergenic | 40.0% | |
| AGCAGAAAACACAAGTACAG+TGG | - | Chr1:32098296-32098315 | MsG0180002072.01.T01:three_prime_UTR | 40.0% | |
| AGCCAAACCTAACAAATGTG+TGG | + | Chr1:32099203-32099222 | None:intergenic | 40.0% | |
| ATTATGGCCCTAGGTTATGT+TGG | - | Chr1:32098948-32098967 | MsG0180002072.01.T01:three_prime_UTR | 40.0% | |
| GACTAACCCAAAGTGAATCT+AGG | + | Chr1:32099167-32099186 | None:intergenic | 40.0% | |
| GCAAATCTAGTCCAACCATA+AGG | + | Chr1:32098628-32098647 | None:intergenic | 40.0% | |
| GCAAGAACCAATGTTGAAGT+TGG | + | Chr1:32099253-32099272 | None:intergenic | 40.0% | |
| GCCACCAATAGTGAAAACAT+CGG | + | Chr1:32098406-32098425 | None:intergenic | 40.0% | |
| TAACCCAAAGTGAATCTAGG+TGG | + | Chr1:32099164-32099183 | None:intergenic | 40.0% | |
| TACATTTAGCACCCCACAAA+AGG | + | Chr1:32098792-32098811 | None:intergenic | 40.0% | |
| TGGATTAACAGCATCAGAAG+TGG | + | Chr1:32098447-32098466 | None:intergenic | 40.0% | |
| TTATGGCCCTAGGTTATGTT+GGG | - | Chr1:32098949-32098968 | MsG0180002072.01.T01:three_prime_UTR | 40.0% | |
| ! | GACCACACATTTGTTAGGTT+TGG | - | Chr1:32099198-32099217 | MsG0180002072.01.T01:CDS | 40.0% |
| ! | TCCGATGTTTTCACTATTGG+TGG | - | Chr1:32098402-32098421 | MsG0180002072.01.T01:three_prime_UTR | 40.0% |
| !! | CTGAAATTTGCTCCCTTTTG+TGG | - | Chr1:32098776-32098795 | MsG0180002072.01.T01:three_prime_UTR | 40.0% |
| !! | GAAATTTGCTCCCTTTTGTG+GGG | - | Chr1:32098778-32098797 | MsG0180002072.01.T01:three_prime_UTR | 40.0% |
| AATGAAGGGCAATAGGGTCT+TGG | - | Chr1:32098869-32098888 | MsG0180002072.01.T01:three_prime_UTR | 45.0% | |
| CAGCTTAACTGTGGTCAATC+AGG | - | Chr1:32098654-32098673 | MsG0180002072.01.T01:three_prime_UTR | 45.0% | |
| CAGTTGAAGATCCGCCAATT+GGG | - | Chr1:32098328-32098347 | MsG0180002072.01.T01:three_prime_UTR | 45.0% | |
| CATGTGAATCTCCCAATTGG+CGG | + | Chr1:32098342-32098361 | None:intergenic | 45.0% | |
| CGGATACTGATCTTTCCGAA+GGG | - | Chr1:32098547-32098566 | MsG0180002072.01.T01:three_prime_UTR | 45.0% | |
| GAATCTAGGTGGTCCAAACA+TGG | + | Chr1:32099153-32099172 | None:intergenic | 45.0% | |
| GGACCACCTAGATTCACTTT+GGG | - | Chr1:32099158-32099177 | MsG0180002072.01.T01:exon | 45.0% | |
| GGATACTGATCTTTCCGAAG+GGG | - | Chr1:32098548-32098567 | MsG0180002072.01.T01:three_prime_UTR | 45.0% | |
| GTCCATGTGAATCTCCCAAT+TGG | + | Chr1:32098345-32098364 | None:intergenic | 45.0% | |
| TGCACAGTTCAGCTTAACTG+TGG | - | Chr1:32098645-32098664 | MsG0180002072.01.T01:three_prime_UTR | 45.0% | |
| TGGACCACCTAGATTCACTT+TGG | - | Chr1:32099157-32099176 | MsG0180002072.01.T01:exon | 45.0% | |
| TGTTCAGCATTGTTCCCCTT+CGG | + | Chr1:32098565-32098584 | None:intergenic | 45.0% | |
| !! | CTGGCATACCCTTAGCTTTA+AGG | + | Chr1:32099292-32099311 | None:intergenic | 45.0% |
| CACAAGTACAGTGGATGCTG+TGG | - | Chr1:32098305-32098324 | MsG0180002072.01.T01:three_prime_UTR | 50.0% | |
| CAGGTTCGATGCCTTATGGT+TGG | - | Chr1:32098614-32098633 | MsG0180002072.01.T01:three_prime_UTR | 50.0% | |
| CGCCAATTGGGAGATTCACA+TGG | - | Chr1:32098340-32098359 | MsG0180002072.01.T01:three_prime_UTR | 50.0% | |
| GATGCAGGTTCGATGCCTTA+TGG | - | Chr1:32098610-32098629 | MsG0180002072.01.T01:three_prime_UTR | 50.0% | |
| GCAATAGGGTCTTGGCAGTT+TGG | - | Chr1:32098877-32098896 | MsG0180002072.01.T01:three_prime_UTR | 50.0% | |
| GCAGTTGAAGATCCGCCAAT+TGG | - | Chr1:32098327-32098346 | MsG0180002072.01.T01:three_prime_UTR | 50.0% | |
| GCGGATACTGATCTTTCCGA+AGG | - | Chr1:32098546-32098565 | MsG0180002072.01.T01:three_prime_UTR | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 32098267 | 32099639 | 32098267 | ID=MsG0180002072.01;Name=MsG0180002072.01 |
| Chr1 | mRNA | 32098267 | 32099639 | 32098267 | ID=MsG0180002072.01.T01;Parent=MsG0180002072.01;Name=MsG0180002072.01.T01;_AED=0.47;_eAED=0.47;_QI=0|1|0.66|1|0.5|0.33|3|885|117 |
| Chr1 | exon | 32099473 | 32099639 | 32099473 | ID=MsG0180002072.01.T01:exon:7179;Parent=MsG0180002072.01.T01 |
| Chr1 | exon | 32099073 | 32099360 | 32099073 | ID=MsG0180002072.01.T01:exon:7180;Parent=MsG0180002072.01.T01 |
| Chr1 | exon | 32098267 | 32099050 | 32098267 | ID=MsG0180002072.01.T01:exon:7181;Parent=MsG0180002072.01.T01 |
| Chr1 | CDS | 32099473 | 32099639 | 32099473 | ID=MsG0180002072.01.T01:cds;Parent=MsG0180002072.01.T01 |
| Chr1 | CDS | 32099174 | 32099360 | 32099174 | ID=MsG0180002072.01.T01:cds;Parent=MsG0180002072.01.T01 |
| Chr1 | three_prime_UTR | 32099073 | 32099173 | 32099073 | ID=MsG0180002072.01.T01:three_prime_utr;Parent=MsG0180002072.01.T01 |
| Chr1 | three_prime_UTR | 32098267 | 32099050 | 32098267 | ID=MsG0180002072.01.T01:three_prime_utr;Parent=MsG0180002072.01.T01 |
| Gene Sequence |
| Protein sequence |
