Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030865.01.T01 | XP_003618594.1 | 97.765 | 179 | 4 | 0 | 1 | 179 | 1 | 179 | 4.43E-128 | 367 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030865.01.T01 | Q39131 | 55.215 | 163 | 69 | 3 | 20 | 179 | 11 | 172 | 1.53E-62 | 193 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030865.01.T01 | Q2HW94 | 97.765 | 179 | 4 | 0 | 1 | 179 | 1 | 179 | 2.12e-128 | 367 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047814.01 | MsG0680030865.01 | 0.841061 | 5.971922e-58 | 8.671505e-55 |
| MsG0080048687.01 | MsG0680030865.01 | 0.811617 | 6.401781e-51 | 3.981300e-48 |
| MsG0180000001.01 | MsG0680030865.01 | 0.801883 | 7.296086e-49 | 3.524013e-46 |
| MsG0180000139.01 | MsG0680030865.01 | 0.804972 | 1.671229e-49 | 8.736727e-47 |
| MsG0180000324.01 | MsG0680030865.01 | 0.819551 | 1.094638e-52 | 8.449999e-50 |
| MsG0180000331.01 | MsG0680030865.01 | 0.807900 | 4.032115e-50 | 2.272896e-47 |
| MsG0180000334.01 | MsG0680030865.01 | 0.821802 | 3.326209e-53 | 2.734054e-50 |
| MsG0180000364.01 | MsG0680030865.01 | 0.834790 | 2.445172e-56 | 2.932100e-53 |
| MsG0180000557.01 | MsG0680030865.01 | 0.849359 | 3.401728e-60 | 6.433096e-57 |
| MsG0180001237.01 | MsG0680030865.01 | 0.844146 | 9.055147e-59 | 1.448626e-55 |
| MsG0180001260.01 | MsG0680030865.01 | 0.800659 | 1.298927e-48 | 6.082341e-46 |
| MsG0180003094.01 | MsG0680030865.01 | 0.848018 | 8.005345e-60 | 1.449208e-56 |
| MsG0180003493.01 | MsG0680030865.01 | 0.847643 | 1.015827e-59 | 1.817459e-56 |
| MsG0180003920.01 | MsG0680030865.01 | 0.802086 | 6.627332e-49 | 3.217472e-46 |
| MsG0180004754.01 | MsG0680030865.01 | 0.861449 | 1.017764e-63 | 2.881252e-60 |
| MsG0180004991.01 | MsG0680030865.01 | 0.812612 | 3.884429e-51 | 2.481133e-48 |
| MsG0180005049.01 | MsG0680030865.01 | 0.840204 | 1.001253e-57 | 1.415954e-54 |
| MsG0180005337.01 | MsG0680030865.01 | 0.827128 | 1.855849e-54 | 1.775456e-51 |
| MsG0180005443.01 | MsG0680030865.01 | 0.810017 | 1.420846e-50 | 8.471158e-48 |
| MsG0180005530.01 | MsG0680030865.01 | 0.872291 | 3.559389e-67 | 1.481260e-63 |
| MsG0180005531.01 | MsG0680030865.01 | 0.811320 | 7.426262e-51 | 4.582397e-48 |
| MsG0180005575.01 | MsG0680030865.01 | 0.824499 | 7.810725e-54 | 6.930407e-51 |
| MsG0180005746.01 | MsG0680030865.01 | 0.823262 | 1.522815e-53 | 1.304654e-50 |
| MsG0180005962.01 | MsG0680030865.01 | -0.861682 | 8.642998e-64 | 2.465166e-60 |
| MsG0280006305.01 | MsG0680030865.01 | 0.807018 | 6.202405e-50 | 3.417161e-47 |
| MsG0280010907.01 | MsG0680030865.01 | 0.825622 | 4.239053e-54 | 3.884222e-51 |
| MsG0280010977.01 | MsG0680030865.01 | 0.838015 | 3.695340e-57 | 4.886757e-54 |
| MsG0280011014.01 | MsG0680030865.01 | 0.820177 | 7.870590e-53 | 6.183213e-50 |
| MsG0280011388.01 | MsG0680030865.01 | 0.812531 | 4.045320e-51 | 2.578510e-48 |
| MsG0280011416.01 | MsG0680030865.01 | 0.802119 | 6.525357e-49 | 3.170498e-46 |
| MsG0380013579.01 | MsG0680030865.01 | 0.801656 | 8.124786e-49 | 3.901358e-46 |
| MsG0380013641.01 | MsG0680030865.01 | 0.842316 | 2.785284e-58 | 4.207145e-55 |
| MsG0380014778.01 | MsG0680030865.01 | 0.843657 | 1.224842e-58 | 1.929786e-55 |
| MsG0680030721.01 | MsG0680030865.01 | 0.827581 | 1.445991e-54 | 1.401639e-51 |
| MsG0680030865.01 | MsG0680031628.01 | 0.805302 | 1.425173e-49 | 7.513629e-47 |
| MsG0680030865.01 | MsG0680034497.01 | 0.884735 | 1.487527e-71 | 9.928935e-68 |
| MsG0680030865.01 | MsG0680035888.01 | 0.832782 | 7.766180e-56 | 8.770015e-53 |
| MsG0680030865.01 | MsG0780036752.01 | 0.838589 | 2.628897e-57 | 3.537539e-54 |
| MsG0680030865.01 | MsG0780037240.01 | 0.803093 | 4.109442e-49 | 2.046747e-46 |
| MsG0680030865.01 | MsG0780038603.01 | 0.819981 | 8.729398e-53 | 6.820510e-50 |
| MsG0680030865.01 | MsG0780038910.01 | -0.801448 | 8.962077e-49 | 4.281044e-46 |
| MsG0680030865.01 | MsG0780040472.01 | 0.834525 | 2.849812e-56 | 3.391030e-53 |
| MsG0680030865.01 | MsG0780040926.01 | 0.861785 | 8.039261e-64 | 2.301038e-60 |
| MsG0680030865.01 | MsG0780041209.01 | 0.842211 | 2.969106e-58 | 4.469557e-55 |
| MsG0680030865.01 | MsG0780041423.01 | 0.834989 | 2.178680e-56 | 2.628586e-53 |
| MsG0680030865.01 | MsG0780041735.01 | 0.803594 | 3.235390e-49 | 1.632471e-46 |
| MsG0680030865.01 | MsG0880042090.01 | 0.819185 | 1.326488e-52 | 1.013582e-49 |
| MsG0680030865.01 | MsG0880042091.01 | 0.819340 | 1.222946e-52 | 9.384136e-50 |
| MsG0680030865.01 | MsG0880042128.01 | 0.806808 | 6.871270e-50 | 3.765225e-47 |
| MsG0680030865.01 | MsG0880042544.01 | 0.876138 | 1.771941e-68 | 8.495585e-65 |
| MsG0680030865.01 | MsG0880042760.01 | 0.834375 | 3.107786e-56 | 3.681373e-53 |
| MsG0680030865.01 | MsG0880042836.01 | 0.829230 | 5.780966e-55 | 5.881157e-52 |
| MsG0680030865.01 | MsG0880043142.01 | 0.801157 | 1.027813e-48 | 4.874004e-46 |
| MsG0680030865.01 | MsG0880043992.01 | 0.801771 | 7.694878e-49 | 3.705738e-46 |
| MsG0680030865.01 | MsG0880043994.01 | 0.802706 | 4.939205e-49 | 2.436110e-46 |
| MsG0680030865.01 | MsG0880044025.01 | 0.803907 | 2.785754e-49 | 1.416967e-46 |
| MsG0680030865.01 | MsG0880044555.01 | 0.814891 | 1.223085e-51 | 8.307266e-49 |
| MsG0680030865.01 | MsG0880044782.01 | 0.824596 | 7.408008e-54 | 6.592516e-51 |
| MsG0680030865.01 | MsG0880045294.01 | 0.840814 | 6.931504e-58 | 9.989692e-55 |
| MsG0680030865.01 | MsG0880045433.01 | -0.803403 | 3.545411e-49 | 1.780078e-46 |
| MsG0680030865.01 | MsG0880045483.01 | 0.821024 | 5.030727e-53 | 4.046348e-50 |
| MsG0680030865.01 | MsG0880045506.01 | 0.806548 | 7.798547e-50 | 4.244814e-47 |
| MsG0680030865.01 | MsG0880045838.01 | 0.814292 | 1.659543e-51 | 1.109174e-48 |
| MsG0680030865.01 | MsG0880046027.01 | 0.803365 | 3.609895e-49 | 1.810565e-46 |
| MsG0680030865.01 | MsG0880046086.01 | 0.825867 | 3.709461e-54 | 3.422895e-51 |
| MsG0680030865.01 | MsG0880046237.01 | 0.840362 | 9.100093e-58 | 1.293196e-54 |
| MsG0680030865.01 | MsG0880046238.01 | 0.804049 | 2.603025e-49 | 1.328820e-46 |
| MsG0680030865.01 | MsG0880047183.01 | 0.821431 | 4.053564e-53 | 3.297212e-50 |
| MsG0680030865.01 | MsG0880047388.01 | 0.823043 | 1.713120e-53 | 1.458804e-50 |
| MsG0480018846.01 | MsG0680030865.01 | 0.818619 | 1.783001e-52 | 1.341290e-49 |
| MsG0480018894.01 | MsG0680030865.01 | 0.812677 | 3.758374e-51 | 2.404749e-48 |
| MsG0480019350.01 | MsG0680030865.01 | 0.807572 | 4.735082e-50 | 2.646441e-47 |
| MsG0480019922.01 | MsG0680030865.01 | 0.801921 | 7.166622e-49 | 3.464591e-46 |
| MsG0480020597.01 | MsG0680030865.01 | 0.846110 | 2.668570e-59 | 4.544371e-56 |
| MsG0480020675.01 | MsG0680030865.01 | 0.811934 | 5.459759e-51 | 3.424199e-48 |
| MsG0480020780.01 | MsG0680030865.01 | 0.813257 | 2.805158e-51 | 1.822790e-48 |
| MsG0480022228.01 | MsG0680030865.01 | 0.833696 | 4.596690e-56 | 5.334401e-53 |
| MsG0480022325.01 | MsG0680030865.01 | 0.811938 | 5.450121e-51 | 3.418573e-48 |
| MsG0480022620.01 | MsG0680030865.01 | 0.850320 | 1.833061e-60 | 3.576885e-57 |
| MsG0480023053.01 | MsG0680030865.01 | 0.826345 | 2.854773e-54 | 2.670268e-51 |
| MsG0480023387.01 | MsG0680030865.01 | 0.801909 | 7.208389e-49 | 3.483816e-46 |
| MsG0480023463.01 | MsG0680030865.01 | 0.825782 | 3.885093e-54 | 3.576313e-51 |
| MsG0480023620.01 | MsG0680030865.01 | 0.827536 | 1.481649e-54 | 1.434413e-51 |
| MsG0480023639.01 | MsG0680030865.01 | 0.832371 | 9.821630e-56 | 1.095586e-52 |
| MsG0480023755.01 | MsG0680030865.01 | 0.836782 | 7.646813e-57 | 9.737378e-54 |
| MsG0480023808.01 | MsG0680030865.01 | 0.809228 | 2.099370e-50 | 1.225748e-47 |
| MsG0580024109.01 | MsG0680030865.01 | 0.811645 | 6.312776e-51 | 3.928762e-48 |
| MsG0580024819.01 | MsG0680030865.01 | 0.836743 | 7.824166e-57 | 9.951363e-54 |
| MsG0580026059.01 | MsG0680030865.01 | 0.882238 | 1.232231e-70 | 7.448975e-67 |
| MsG0380015944.01 | MsG0680030865.01 | 0.821613 | 3.678603e-53 | 3.007363e-50 |
| MsG0380016005.01 | MsG0680030865.01 | 0.816580 | 5.139227e-52 | 3.655722e-49 |
| MsG0380016126.01 | MsG0680030865.01 | 0.804684 | 1.919323e-49 | 9.959263e-47 |
| MsG0380016247.01 | MsG0680030865.01 | 0.836321 | 1.002021e-56 | 1.258531e-53 |
| MsG0380016893.01 | MsG0680030865.01 | 0.811777 | 5.908959e-51 | 3.690556e-48 |
| MsG0380016985.01 | MsG0680030865.01 | 0.801501 | 8.740018e-49 | 4.180666e-46 |
| MsG0380016994.01 | MsG0680030865.01 | 0.828909 | 6.914939e-55 | 6.967594e-52 |
| MsG0380017159.01 | MsG0680030865.01 | 0.839994 | 1.135713e-57 | 1.595809e-54 |
| MsG0380017240.01 | MsG0680030865.01 | 0.805802 | 1.119643e-49 | 5.979293e-47 |
| MsG0380017431.01 | MsG0680030865.01 | 0.818292 | 2.114900e-52 | 1.576697e-49 |
| MsG0380017836.01 | MsG0680030865.01 | 0.850838 | 1.310810e-60 | 2.601664e-57 |
| MsG0480018230.01 | MsG0680030865.01 | 0.817429 | 3.313008e-52 | 2.412206e-49 |
| MsG0480018278.01 | MsG0680030865.01 | 0.816181 | 6.311123e-52 | 4.440754e-49 |
| MsG0580026226.01 | MsG0680030865.01 | 0.816485 | 5.396760e-52 | 3.828815e-49 |
| MsG0580026593.01 | MsG0680030865.01 | 0.825039 | 5.824053e-54 | 5.248999e-51 |
| MsG0580027431.01 | MsG0680030865.01 | 0.809597 | 1.748866e-50 | 1.031218e-47 |
| MsG0580028060.01 | MsG0680030865.01 | 0.870158 | 1.802528e-66 | 6.941484e-63 |
| MsG0580028897.01 | MsG0680030865.01 | 0.825326 | 4.983126e-54 | 4.527785e-51 |
| MsG0580029127.01 | MsG0680030865.01 | 0.843210 | 1.611798e-58 | 2.503540e-55 |
| MsG0580029729.01 | MsG0680030865.01 | 0.815272 | 1.006568e-51 | 6.908249e-49 |
| MsG0280006477.01 | MsG0680030865.01 | 0.812823 | 3.491609e-51 | 2.242497e-48 |
| MsG0280007067.01 | MsG0680030865.01 | 0.816744 | 4.722780e-52 | 3.374562e-49 |
| MsG0280007196.01 | MsG0680030865.01 | 0.826805 | 2.217858e-54 | 2.101799e-51 |
| MsG0280007226.01 | MsG0680030865.01 | 0.820248 | 7.583127e-53 | 5.968608e-50 |
| MsG0280007440.01 | MsG0680030865.01 | 0.805341 | 1.398931e-49 | 7.382588e-47 |
| MsG0280007452.01 | MsG0680030865.01 | 0.812336 | 4.463520e-51 | 2.830344e-48 |
| MsG0280008614.01 | MsG0680030865.01 | 0.870975 | 9.714657e-67 | 3.853235e-63 |
| MsG0280008909.01 | MsG0680030865.01 | 0.855452 | 6.247723e-62 | 1.443193e-58 |
| MsG0280009141.01 | MsG0680030865.01 | 0.803443 | 3.478150e-49 | 1.748041e-46 |
| MsG0280009794.01 | MsG0680030865.01 | 0.843218 | 1.604186e-58 | 2.492377e-55 |
| MsG0280010001.01 | MsG0680030865.01 | 0.816551 | 5.217176e-52 | 3.708085e-49 |
| MsG0280010015.01 | MsG0680030865.01 | 0.807163 | 5.780320e-50 | 3.196604e-47 |
| MsG0280010491.01 | MsG0680030865.01 | 0.802368 | 5.799460e-49 | 2.835945e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030865.01.T01 | MTR_6g013420 | 97.765 | 179 | 4 | 0 | 1 | 179 | 1 | 179 | 5.37e-132 | 367 |
| MsG0680030865.01.T01 | MTR_6g013200 | 65.190 | 158 | 45 | 2 | 1 | 151 | 1 | 155 | 5.15e-71 | 213 |
| MsG0680030865.01.T01 | MTR_3g117110 | 45.522 | 134 | 68 | 3 | 41 | 172 | 34 | 164 | 1.03e-34 | 120 |
| MsG0680030865.01.T01 | MTR_5g088180 | 50.420 | 119 | 57 | 2 | 35 | 151 | 26 | 144 | 4.47e-34 | 118 |
| MsG0680030865.01.T01 | MTR_6g013170 | 43.030 | 165 | 85 | 4 | 17 | 178 | 9 | 167 | 1.51e-33 | 117 |
| MsG0680030865.01.T01 | MTR_5g088170 | 46.324 | 136 | 68 | 3 | 35 | 168 | 13 | 145 | 4.36e-33 | 115 |
| MsG0680030865.01.T01 | MTR_5g088000 | 45.385 | 130 | 65 | 2 | 26 | 149 | 4 | 133 | 1.82e-32 | 113 |
| MsG0680030865.01.T01 | MTR_4g007250 | 39.416 | 137 | 74 | 2 | 33 | 162 | 24 | 158 | 1.43e-25 | 97.1 |
| MsG0680030865.01.T01 | MTR_5g087970 | 37.589 | 141 | 82 | 3 | 20 | 154 | 11 | 151 | 8.54e-22 | 87.4 |
| MsG0680030865.01.T01 | MTR_1g090190 | 38.931 | 131 | 68 | 4 | 34 | 155 | 19 | 146 | 8.74e-20 | 82.0 |
| MsG0680030865.01.T01 | MTR_2g088990 | 35.570 | 149 | 86 | 7 | 18 | 163 | 6 | 147 | 1.22e-19 | 82.8 |
| MsG0680030865.01.T01 | MTR_3g099980 | 37.500 | 120 | 70 | 4 | 20 | 136 | 7 | 124 | 3.76e-18 | 79.0 |
| MsG0680030865.01.T01 | MTR_3g099680 | 36.667 | 120 | 71 | 4 | 20 | 136 | 7 | 124 | 1.03e-17 | 77.8 |
| MsG0680030865.01.T01 | MTR_8g007035 | 40.351 | 114 | 62 | 3 | 24 | 134 | 10 | 120 | 2.49e-17 | 76.3 |
| MsG0680030865.01.T01 | MTR_2g090575 | 36.134 | 119 | 71 | 3 | 19 | 134 | 6 | 122 | 4.83e-16 | 74.7 |
| MsG0680030865.01.T01 | MTR_4g077787 | 29.801 | 151 | 93 | 5 | 8 | 151 | 4 | 148 | 7.67e-16 | 72.0 |
| MsG0680030865.01.T01 | MTR_2g101300 | 39.024 | 123 | 63 | 5 | 34 | 149 | 23 | 140 | 8.04e-16 | 72.0 |
| MsG0680030865.01.T01 | MTR_4g124280 | 39.048 | 105 | 57 | 3 | 35 | 134 | 22 | 124 | 9.39e-16 | 72.8 |
| MsG0680030865.01.T01 | MTR_3g099580 | 36.441 | 118 | 70 | 4 | 20 | 135 | 7 | 121 | 2.19e-15 | 70.9 |
| MsG0680030865.01.T01 | MTR_2g025580 | 30.370 | 135 | 90 | 3 | 18 | 150 | 7 | 139 | 2.71e-15 | 70.1 |
| MsG0680030865.01.T01 | MTR_3g099570 | 34.375 | 128 | 79 | 4 | 20 | 145 | 7 | 131 | 3.27e-15 | 70.1 |
| MsG0680030865.01.T01 | MTR_3g099540 | 34.921 | 126 | 74 | 5 | 11 | 135 | 4 | 122 | 4.08e-15 | 68.9 |
| MsG0680030865.01.T01 | MTR_7g086160 | 32.000 | 125 | 80 | 4 | 13 | 134 | 1 | 123 | 4.10e-15 | 69.3 |
| MsG0680030865.01.T01 | MTR_5g006040 | 30.282 | 142 | 89 | 5 | 16 | 154 | 7 | 141 | 4.59e-15 | 69.7 |
| MsG0680030865.01.T01 | MTR_4g114870 | 41.176 | 102 | 53 | 3 | 38 | 134 | 191 | 290 | 4.70e-15 | 72.0 |
| MsG0680030865.01.T01 | MTR_4g114870 | 34.532 | 139 | 84 | 3 | 17 | 150 | 8 | 144 | 5.60e-15 | 72.0 |
| MsG0680030865.01.T01 | MTR_8g463180 | 36.691 | 139 | 78 | 6 | 17 | 149 | 1 | 135 | 6.05e-15 | 71.2 |
| MsG0680030865.01.T01 | MTR_7g086140 | 32.258 | 124 | 80 | 3 | 13 | 134 | 1 | 122 | 6.58e-15 | 68.9 |
| MsG0680030865.01.T01 | MTR_7g086190 | 32.258 | 124 | 80 | 3 | 13 | 134 | 1 | 122 | 6.58e-15 | 68.9 |
| MsG0680030865.01.T01 | MTR_1g112700 | 27.711 | 166 | 106 | 4 | 16 | 169 | 11 | 174 | 6.89e-15 | 69.3 |
| MsG0680030865.01.T01 | MTR_8g007020 | 38.261 | 115 | 63 | 5 | 24 | 134 | 10 | 120 | 1.63e-14 | 68.6 |
| MsG0680030865.01.T01 | MTR_1g105130 | 31.624 | 117 | 76 | 3 | 20 | 134 | 7 | 121 | 4.79e-14 | 66.6 |
| MsG0680030865.01.T01 | MTR_1g105120 | 31.624 | 117 | 76 | 3 | 20 | 134 | 7 | 121 | 4.79e-14 | 66.6 |
| MsG0680030865.01.T01 | MTR_1g104800 | 32.143 | 112 | 71 | 3 | 26 | 134 | 13 | 122 | 1.47e-13 | 65.9 |
| MsG0680030865.01.T01 | MTR_4g081100 | 33.333 | 126 | 77 | 3 | 14 | 134 | 8 | 131 | 2.47e-13 | 65.9 |
| MsG0680030865.01.T01 | MTR_4g078410 | 32.394 | 142 | 82 | 4 | 20 | 149 | 7 | 146 | 2.92e-13 | 65.1 |
| MsG0680030865.01.T01 | MTR_7g086230 | 32.231 | 121 | 79 | 2 | 16 | 135 | 4 | 122 | 3.58e-13 | 64.7 |
| MsG0680030865.01.T01 | MTR_3g105930 | 31.544 | 149 | 86 | 5 | 35 | 169 | 24 | 170 | 6.39e-13 | 63.9 |
| MsG0680030865.01.T01 | MTR_6g023760 | 35.238 | 105 | 65 | 2 | 33 | 136 | 21 | 123 | 6.48e-13 | 63.9 |
| MsG0680030865.01.T01 | MTR_8g094990 | 36.585 | 123 | 66 | 4 | 19 | 134 | 6 | 123 | 9.09e-13 | 65.1 |
| MsG0680030865.01.T01 | MTR_8g095013 | 34.167 | 120 | 73 | 3 | 19 | 134 | 6 | 123 | 1.04e-12 | 65.1 |
| MsG0680030865.01.T01 | MTR_6g022170 | 35.714 | 112 | 62 | 4 | 29 | 134 | 25 | 132 | 1.90e-12 | 62.4 |
| MsG0680030865.01.T01 | MTR_7g086220 | 30.000 | 100 | 68 | 1 | 21 | 120 | 8 | 105 | 2.05e-12 | 62.4 |
| MsG0680030865.01.T01 | MTR_7g086280 | 31.405 | 121 | 80 | 2 | 16 | 135 | 4 | 122 | 2.64e-12 | 62.4 |
| MsG0680030865.01.T01 | MTR_8g089110 | 34.188 | 117 | 72 | 3 | 16 | 132 | 7 | 118 | 2.85e-12 | 60.8 |
| MsG0680030865.01.T01 | MTR_3g089035 | 35.000 | 100 | 61 | 2 | 33 | 132 | 28 | 123 | 3.22e-12 | 60.8 |
| MsG0680030865.01.T01 | MTR_1g014120 | 31.343 | 134 | 77 | 5 | 10 | 137 | 4 | 128 | 4.07e-12 | 62.0 |
| MsG0680030865.01.T01 | MTR_2g079030 | 33.582 | 134 | 76 | 6 | 27 | 149 | 11 | 142 | 4.54e-11 | 60.8 |
| MsG0680030865.01.T01 | MTR_4g130780 | 31.655 | 139 | 78 | 6 | 14 | 139 | 5 | 139 | 4.55e-11 | 59.3 |
| MsG0680030865.01.T01 | MTR_7g086090 | 31.200 | 125 | 81 | 3 | 16 | 139 | 4 | 124 | 6.22e-11 | 59.7 |
| MsG0680030865.01.T01 | MTR_8g088830 | 33.981 | 103 | 63 | 3 | 31 | 132 | 21 | 119 | 7.81e-11 | 57.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680030865.01.T01 | AT5G15350 | 55.215 | 163 | 69 | 3 | 20 | 179 | 11 | 172 | 1.56e-63 | 193 |
| MsG0680030865.01.T01 | AT4G12880 | 56.034 | 116 | 51 | 0 | 20 | 135 | 11 | 126 | 3.12e-45 | 146 |
| MsG0680030865.01.T01 | AT3G01070 | 56.962 | 158 | 60 | 5 | 18 | 167 | 4 | 161 | 2.57e-39 | 132 |
| MsG0680030865.01.T01 | AT2G27035 | 42.063 | 126 | 70 | 2 | 26 | 151 | 17 | 139 | 5.58e-32 | 113 |
| MsG0680030865.01.T01 | AT4G12880 | 59.420 | 69 | 28 | 0 | 67 | 135 | 20 | 88 | 7.11e-24 | 90.5 |
| MsG0680030865.01.T01 | AT3G20570 | 40.164 | 122 | 64 | 4 | 20 | 134 | 9 | 128 | 4.84e-18 | 78.2 |
| MsG0680030865.01.T01 | AT2G25060 | 35.043 | 117 | 68 | 4 | 24 | 134 | 17 | 131 | 2.76e-17 | 75.9 |
| MsG0680030865.01.T01 | AT5G26330 | 35.398 | 113 | 68 | 3 | 25 | 134 | 11 | 121 | 4.25e-16 | 72.8 |
| MsG0680030865.01.T01 | AT2G32300 | 33.051 | 118 | 76 | 2 | 18 | 134 | 6 | 121 | 8.41e-16 | 73.2 |
| MsG0680030865.01.T01 | AT2G32300 | 30.534 | 131 | 88 | 2 | 5 | 134 | 23 | 151 | 1.39e-15 | 73.2 |
| MsG0680030865.01.T01 | AT4G32490 | 34.711 | 121 | 72 | 4 | 17 | 134 | 12 | 128 | 1.40e-15 | 72.0 |
| MsG0680030865.01.T01 | AT3G17675 | 33.333 | 123 | 75 | 3 | 15 | 134 | 9 | 127 | 2.32e-15 | 69.3 |
| MsG0680030865.01.T01 | AT5G07475 | 32.308 | 130 | 82 | 4 | 27 | 153 | 19 | 145 | 2.33e-15 | 70.9 |
| MsG0680030865.01.T01 | AT5G53870 | 33.548 | 155 | 93 | 5 | 19 | 167 | 13 | 163 | 6.78e-15 | 71.6 |
| MsG0680030865.01.T01 | AT5G53870 | 33.548 | 155 | 93 | 5 | 19 | 167 | 13 | 163 | 9.47e-15 | 71.2 |
| MsG0680030865.01.T01 | AT1G17800 | 36.364 | 99 | 60 | 2 | 36 | 133 | 39 | 135 | 3.85e-14 | 66.6 |
| MsG0680030865.01.T01 | AT4G27520 | 36.441 | 118 | 68 | 4 | 20 | 134 | 15 | 128 | 4.04e-14 | 69.3 |
| MsG0680030865.01.T01 | AT4G28365 | 37.624 | 101 | 58 | 3 | 37 | 134 | 28 | 126 | 4.58e-14 | 67.4 |
| MsG0680030865.01.T01 | AT2G23990 | 37.500 | 120 | 65 | 5 | 40 | 152 | 29 | 145 | 8.36e-14 | 67.0 |
| MsG0680030865.01.T01 | AT2G31050 | 38.261 | 115 | 67 | 3 | 33 | 145 | 24 | 136 | 2.86e-13 | 65.5 |
| MsG0680030865.01.T01 | AT4G31840 | 32.283 | 127 | 77 | 5 | 14 | 134 | 4 | 127 | 1.01e-12 | 63.5 |
| MsG0680030865.01.T01 | AT3G27200 | 30.508 | 118 | 79 | 2 | 18 | 134 | 6 | 121 | 1.68e-12 | 62.8 |
| MsG0680030865.01.T01 | AT3G60280 | 37.736 | 106 | 62 | 3 | 30 | 134 | 16 | 118 | 3.37e-12 | 62.8 |
| MsG0680030865.01.T01 | AT2G26720 | 35.577 | 104 | 63 | 3 | 33 | 134 | 24 | 125 | 4.74e-12 | 62.4 |
| MsG0680030865.01.T01 | AT5G14345 | 33.582 | 134 | 78 | 5 | 27 | 153 | 5 | 134 | 5.47e-12 | 60.8 |
| MsG0680030865.01.T01 | AT4G30590 | 35.922 | 103 | 58 | 4 | 38 | 134 | 28 | 128 | 1.50e-11 | 60.5 |
| MsG0680030865.01.T01 | AT3G60270 | 35.577 | 104 | 65 | 2 | 31 | 134 | 19 | 120 | 1.74e-11 | 60.5 |
| MsG0680030865.01.T01 | AT2G02850 | 30.469 | 128 | 85 | 2 | 5 | 132 | 3 | 126 | 5.75e-11 | 57.8 |
Find 46 sgRNAs with CRISPR-Local
Find 139 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTGTTTAATTTAATTTAT+TGG | 0.096960 | 6:-10650299 | MsG0680030865.01.T01:three_prime_UTR |
| ACACCATTTGGCATTGTTTA+AGG | 0.143798 | 6:+10650507 | None:intergenic |
| GGTTTCTGCTACAAGGTTTA+TGG | 0.180309 | 6:-10652737 | MsG0680030865.01.T01:CDS |
| GGGATTCATTCATTTATTTA+TGG | 0.202648 | 6:-10650562 | MsG0680030865.01.T01:CDS |
| GAAATCAAATGCGGAAATTA+TGG | 0.269711 | 6:-10650275 | None:intergenic |
| TTGACCTCAAATGAGGTTAA+AGG | 0.308233 | 6:-10650424 | MsG0680030865.01.T01:three_prime_UTR |
| CAAATTTCAACTACACTACT+TGG | 0.337714 | 6:-10652690 | MsG0680030865.01.T01:CDS |
| TCACTTCTAGCACATTCATT+TGG | 0.386132 | 6:+10650855 | None:intergenic |
| TGAACAAATGTAACACCATT+TGG | 0.389046 | 6:+10650495 | None:intergenic |
| CAGATCATCCACTTCACAAT+TGG | 0.391448 | 6:-10650805 | MsG0680030865.01.T01:CDS |
| TGACCTCAAATGAGGTTAAA+GGG | 0.392017 | 6:-10650423 | MsG0680030865.01.T01:three_prime_UTR |
| GTTTATGGTTGGTGGTAGAA+TGG | 0.400420 | 6:-10652722 | MsG0680030865.01.T01:CDS |
| CCACCCTTTAACCTCATTTG+AGG | 0.402826 | 6:+10650420 | None:intergenic |
| ACAATGGTGTTTCTGTTACT+TGG | 0.406835 | 6:-10652787 | MsG0680030865.01.T01:CDS |
| GCAACATTCCTTTCTTCTAA+AGG | 0.414486 | 6:-10650629 | MsG0680030865.01.T01:CDS |
| AGCATTTCTACAATGGTGAT+TGG | 0.420256 | 6:-10652657 | MsG0680030865.01.T01:CDS |
| AGATTTGTCCTTTAGAAGAA+AGG | 0.430408 | 6:+10650621 | None:intergenic |
| TGCCTATGGTTTCTGCTACA+AGG | 0.439834 | 6:-10652744 | MsG0680030865.01.T01:CDS |
| CCACTTCACAATTGGACAAC+CGG | 0.443540 | 6:-10650797 | MsG0680030865.01.T01:CDS |
| GCTACAAGGTTTATGGTTGG+TGG | 0.457164 | 6:-10652730 | MsG0680030865.01.T01:CDS |
| TGTTCTTGTCATGTTGCCTA+TGG | 0.468041 | 6:-10652758 | MsG0680030865.01.T01:CDS |
| TACTATTTCATCAGCGGCAA+AGG | 0.470534 | 6:-10650734 | MsG0680030865.01.T01:CDS |
| TAATGGCGAGTCACGTTCAA+TGG | 0.474693 | 6:+10650755 | None:intergenic |
| CACAATTGGACAACCGGAGC+TGG | 0.479780 | 6:-10650791 | MsG0680030865.01.T01:CDS |
| TTTATGGTTGGTGGTAGAAT+GGG | 0.481424 | 6:-10652721 | MsG0680030865.01.T01:CDS |
| CAACTACACTACTTGGGCTA+AGG | 0.482312 | 6:-10652683 | MsG0680030865.01.T01:CDS |
| AACGACATCTCTTCCAGCTC+CGG | 0.493793 | 6:+10650778 | None:intergenic |
| ATTGTTATTGACCTCAAATG+AGG | 0.496435 | 6:-10650431 | MsG0680030865.01.T01:three_prime_UTR |
| AGTAACAGAAACACCATTGT+TGG | 0.496883 | 6:+10652790 | None:intergenic |
| CATCCTTAAACAATGCCAAA+TGG | 0.521606 | 6:-10650510 | MsG0680030865.01.T01:three_prime_UTR |
| TCTGCTACAAGGTTTATGGT+TGG | 0.523527 | 6:-10652733 | MsG0680030865.01.T01:CDS |
| TTCAACAATTTCACCAACAA+TGG | 0.536080 | 6:-10652803 | MsG0680030865.01.T01:CDS |
| AAATTTCAACTACACTACTT+GGG | 0.538580 | 6:-10652689 | MsG0680030865.01.T01:CDS |
| AACTACACTACTTGGGCTAA+GGG | 0.546247 | 6:-10652682 | MsG0680030865.01.T01:CDS |
| TCAGAAACAACAACAATGGA+AGG | 0.553223 | 6:-10652847 | MsG0680030865.01.T01:exon |
| TGGTTGGTGGTAGAATGGGT+TGG | 0.565349 | 6:-10652717 | MsG0680030865.01.T01:CDS |
| ACCACCACCAAAAGCTGCAC+CGG | 0.566963 | 6:-10650663 | MsG0680030865.01.T01:CDS |
| CGCCATTACTATTTCATCAG+CGG | 0.567316 | 6:-10650740 | MsG0680030865.01.T01:CDS |
| TGCCGCTGATGAAATAGTAA+TGG | 0.603131 | 6:+10650738 | None:intergenic |
| TTTATTGGAGAAATCAAATG+CGG | 0.606832 | 6:-10650284 | MsG0680030865.01.T01:three_prime_UTR |
| GAACATCATAGAACAAACAA+AGG | 0.628664 | 6:-10652924 | None:intergenic |
| AAGGGCAAGCATTTCTACAA+TGG | 0.634172 | 6:-10652664 | MsG0680030865.01.T01:CDS |
| CCGGTTGTCCAATTGTGAAG+TGG | 0.638421 | 6:+10650797 | None:intergenic |
| AACCTTGTAGCAGAAACCAT+AGG | 0.652252 | 6:+10652742 | None:intergenic |
| AATGAGGTTAAAGGGTGGTG+TGG | 0.700067 | 6:-10650415 | MsG0680030865.01.T01:three_prime_UTR |
| CCTCAAATGAGGTTAAAGGG+TGG | 0.731492 | 6:-10650420 | MsG0680030865.01.T01:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTATATATCAAACAATA+TGG | + | Chr6:10652096-10652115 | None:intergenic | 10.0% |
| !!! | ACTTGTTTAATTTAATTTAT+TGG | - | Chr6:10652894-10652913 | MsG0680030865.01.T01:five_prime_UTR | 10.0% |
| !!! | ATCATTAATTTGATATTTTA+TGG | - | Chr6:10650956-10650975 | MsG0680030865.01.T01:intron | 10.0% |
| !!! | TCATTTTCTTAAATTATTAA+TGG | + | Chr6:10651481-10651500 | None:intergenic | 10.0% |
| !! | ACAAATTAATTAACTAGTTA+TGG | - | Chr6:10651690-10651709 | MsG0680030865.01.T01:intron | 15.0% |
| !! | ATAGTAAATAAACAATCAAA+AGG | + | Chr6:10651199-10651218 | None:intergenic | 15.0% |
| !! | TAACAAAAAATGATAGAAAA+AGG | + | Chr6:10651264-10651283 | None:intergenic | 15.0% |
| !!! | AATTAAACATTTTCTTCTTT+AGG | - | Chr6:10651901-10651920 | MsG0680030865.01.T01:intron | 15.0% |
| !!! | ATGCTTAATTTGATATTTTA+TGG | - | Chr6:10650703-10650722 | MsG0680030865.01.T01:CDS | 15.0% |
| !!! | ATTAAACATTTTCTTCTTTA+GGG | - | Chr6:10651902-10651921 | MsG0680030865.01.T01:intron | 15.0% |
| !!! | ATTGGTTAATCTTAAATTTT+TGG | - | Chr6:10651001-10651020 | MsG0680030865.01.T01:intron | 15.0% |
| !!! | ATTTACTATTTTCTTTCAAT+AGG | - | Chr6:10651210-10651229 | MsG0680030865.01.T01:intron | 15.0% |
| !!! | TCATTTATAATATTTTGCTT+TGG | - | Chr6:10652734-10652753 | MsG0680030865.01.T01:CDS | 15.0% |
| !!! | TTAATTAATTTGTTGACATT+AGG | + | Chr6:10651683-10651702 | None:intergenic | 15.0% |
| !!! | TTGATATTTTATGGATTAAT+AGG | - | Chr6:10650965-10650984 | MsG0680030865.01.T01:intron | 15.0% |
| !!! | TTGGTTAATCTTAAATTTTT+GGG | - | Chr6:10651002-10651021 | MsG0680030865.01.T01:intron | 15.0% |
| !!! | TTTACTATTTTCTTTCAATA+GGG | - | Chr6:10651211-10651230 | MsG0680030865.01.T01:intron | 15.0% |
| !! | AAACTGAAAAAATGAAATCA+AGG | + | Chr6:10652302-10652321 | None:intergenic | 20.0% |
| !! | GGGTTTATTTAATTAATCTT+AGG | - | Chr6:10650888-10650907 | MsG0680030865.01.T01:intron | 20.0% |
| !! | TTAAGACTATGACTAAAATT+AGG | + | Chr6:10651864-10651883 | None:intergenic | 20.0% |
| !!! | AATCACCTTTTTTAACAAAT+AGG | + | Chr6:10651928-10651947 | None:intergenic | 20.0% |
| !!! | TAGTTAATCTTAGATCTTTT+GGG | - | Chr6:10650749-10650768 | MsG0680030865.01.T01:CDS | 20.0% |
| !!! | TGATTAATCTTAGATCTTTT+GGG | - | Chr6:10650868-10650887 | MsG0680030865.01.T01:CDS | 20.0% |
| !!! | TGGATTATTTTACTTCATTT+TGG | + | Chr6:10651738-10651757 | None:intergenic | 20.0% |
| !!! | TTACTATTTTCTTTCAATAG+GGG | - | Chr6:10651212-10651231 | MsG0680030865.01.T01:intron | 20.0% |
| !!! | TTAGTTAATCTTAGATCTTT+TGG | - | Chr6:10650748-10650767 | MsG0680030865.01.T01:CDS | 20.0% |
| !!! | TTATGGACTAATTAGTAAAA+TGG | - | Chr6:10650720-10650739 | MsG0680030865.01.T01:CDS | 20.0% |
| !!! | TTGATTAATCTTAGATCTTT+TGG | - | Chr6:10650867-10650886 | MsG0680030865.01.T01:CDS | 20.0% |
| !!! | TTTATAATATTTTGCTTTGG+TGG | - | Chr6:10652737-10652756 | MsG0680030865.01.T01:CDS | 20.0% |
| ! | AAATTTCAACTACACTACTT+GGG | - | Chr6:10650504-10650523 | MsG0680030865.01.T01:three_prime_UTR | 25.0% |
| ! | AAGTAATGAAAGTCAACATT+TGG | + | Chr6:10651809-10651828 | None:intergenic | 25.0% |
| ! | GGGATTCATTCATTTATTTA+TGG | - | Chr6:10652631-10652650 | MsG0680030865.01.T01:intron | 25.0% |
| ! | TGGTTTATATGAAACAAGAA+AGG | + | Chr6:10651364-10651383 | None:intergenic | 25.0% |
| ! | TTTATTGGAGAAATCAAATG+CGG | - | Chr6:10652909-10652928 | MsG0680030865.01.T01:five_prime_UTR | 25.0% |
| !! | ATTTTCAGAAACAACAACAA+TGG | - | Chr6:10650342-10650361 | MsG0680030865.01.T01:three_prime_UTR | 25.0% |
| !! | TTATGGATTAATAGGCAAAA+GGG | - | Chr6:10650973-10650992 | MsG0680030865.01.T01:intron | 25.0% |
| !! | TTGATATTTTCTTGACCAAT+AGG | - | Chr6:10650821-10650840 | MsG0680030865.01.T01:CDS | 25.0% |
| !! | TTTATGGATTAATAGGCAAA+AGG | - | Chr6:10650972-10650991 | MsG0680030865.01.T01:intron | 25.0% |
| !! | TTTCAGTTTTTGTGTATGAT+AGG | - | Chr6:10652313-10652332 | MsG0680030865.01.T01:intron | 25.0% |
| !! | TTTGTGTACTTTGTTTAGAT+TGG | - | Chr6:10650623-10650642 | MsG0680030865.01.T01:CDS | 25.0% |
| !!! | ACTTCATTTTGGTTGAAATA+TGG | + | Chr6:10651727-10651746 | None:intergenic | 25.0% |
| !!! | ATTTTGGTTGAAATATGGAT+GGG | + | Chr6:10651722-10651741 | None:intergenic | 25.0% |
| !!! | TAAGCAAGTTTAGCTATTTT+AGG | - | Chr6:10651622-10651641 | MsG0680030865.01.T01:intron | 25.0% |
| !!! | TCTCTCTAAAATAGTTACTT+TGG | - | Chr6:10650600-10650619 | MsG0680030865.01.T01:CDS | 25.0% |
| !!! | TTAGATCTTTTGGGATTATT+TGG | - | Chr6:10650758-10650777 | MsG0680030865.01.T01:CDS | 25.0% |
| AACAACAAGGAGAAAAAAGA+GGG | + | Chr6:10651391-10651410 | None:intergenic | 30.0% | |
| AGTGTTCTTGAAGAATATTG+TGG | - | Chr6:10651112-10651131 | MsG0680030865.01.T01:intron | 30.0% | |
| CAAATTTCAACTACACTACT+TGG | - | Chr6:10650503-10650522 | MsG0680030865.01.T01:three_prime_UTR | 30.0% | |
| TGAACAAATGTAACACCATT+TGG | + | Chr6:10652701-10652720 | None:intergenic | 30.0% | |
| TTCAACAATTTCACCAACAA+TGG | - | Chr6:10650390-10650409 | MsG0680030865.01.T01:three_prime_UTR | 30.0% | |
| TTCATTTGCAAATTAAGCCA+TGG | + | Chr6:10651776-10651795 | None:intergenic | 30.0% | |
| ! | AGATTTGTCCTTTAGAAGAA+AGG | + | Chr6:10652575-10652594 | None:intergenic | 30.0% |
| ! | AGCTTTTTGTGTCAATTTCA+TGG | - | Chr6:10651044-10651063 | MsG0680030865.01.T01:intron | 30.0% |
| ! | ATTGAAACTCTTTTGCCTAT+TGG | + | Chr6:10650839-10650858 | None:intergenic | 30.0% |
| ! | ATTGTTATTGACCTCAAATG+AGG | - | Chr6:10652762-10652781 | MsG0680030865.01.T01:CDS | 30.0% |
| ! | TAGGGCCTATTTGTTAAAAA+AGG | - | Chr6:10651920-10651939 | MsG0680030865.01.T01:intron | 30.0% |
| ! | TTTAAAACGCCAAACATAGA+AGG | + | Chr6:10651597-10651616 | None:intergenic | 30.0% |
| !!! | ATGCCTATTGTTTTTGCTAT+TGG | - | Chr6:10652600-10652619 | MsG0680030865.01.T01:intron | 30.0% |
| !!! | CATTTTGGTTGAAATATGGA+TGG | + | Chr6:10651723-10651742 | None:intergenic | 30.0% |
| !!! | TGTAGTTTTTAGGTAGTGTT+TGG | - | Chr6:10652805-10652824 | MsG0680030865.01.T01:CDS | 30.0% |
| !!! | TTCACTGTTTTTGTAAACTC+TGG | + | Chr6:10650310-10650329 | None:intergenic | 30.0% |
| ACACCATTTGGCATTGTTTA+AGG | + | Chr6:10652689-10652708 | None:intergenic | 35.0% | |
| ACTCACAAGAGAATGTACTT+AGG | + | Chr6:10652177-10652196 | None:intergenic | 35.0% | |
| AGCATTTCTACAATGGTGAT+TGG | - | Chr6:10650536-10650555 | MsG0680030865.01.T01:three_prime_UTR | 35.0% | |
| AGTAACAGAAACACCATTGT+TGG | + | Chr6:10650406-10650425 | None:intergenic | 35.0% | |
| ATAGGCAAAAGGGTTTGAAT+TGG | - | Chr6:10650983-10651002 | MsG0680030865.01.T01:intron | 35.0% | |
| ATTCTCAGATCCACAATTCT+TGG | - | Chr6:10651295-10651314 | MsG0680030865.01.T01:intron | 35.0% | |
| CAACAACAAGGAGAAAAAAG+AGG | + | Chr6:10651392-10651411 | None:intergenic | 35.0% | |
| CATCCTTAAACAATGCCAAA+TGG | - | Chr6:10652683-10652702 | MsG0680030865.01.T01:CDS | 35.0% | |
| GCAACATTCCTTTCTTCTAA+AGG | - | Chr6:10652564-10652583 | MsG0680030865.01.T01:intron | 35.0% | |
| GCACCAATAGCAAAAACAAT+AGG | + | Chr6:10652606-10652625 | None:intergenic | 35.0% | |
| TAATCTTCCAAGCACTTTCA+TGG | + | Chr6:10652228-10652247 | None:intergenic | 35.0% | |
| TCAAAAGAAGCCAAGAATTG+TGG | + | Chr6:10651308-10651327 | None:intergenic | 35.0% | |
| TCACTTCTAGCACATTCATT+TGG | + | Chr6:10652341-10652360 | None:intergenic | 35.0% | |
| TCAGAAACAACAACAATGGA+AGG | - | Chr6:10650346-10650365 | MsG0680030865.01.T01:three_prime_UTR | 35.0% | |
| TGACCTCAAATGAGGTTAAA+GGG | - | Chr6:10652770-10652789 | MsG0680030865.01.T01:CDS | 35.0% | |
| TTGACCTCAAATGAGGTTAA+AGG | - | Chr6:10652769-10652788 | MsG0680030865.01.T01:CDS | 35.0% | |
| ! | ACAATGGTGTTTCTGTTACT+TGG | - | Chr6:10650406-10650425 | MsG0680030865.01.T01:three_prime_UTR | 35.0% |
| ! | AGGAGAAAAAAGAGGGATTT+TGG | + | Chr6:10651384-10651403 | None:intergenic | 35.0% |
| ! | GTCCAAAAGTGTAGATTTGA+GGG | - | Chr6:10651143-10651162 | MsG0680030865.01.T01:intron | 35.0% |
| ! | GTGTGGTGTTTGTAGTTTTT+AGG | - | Chr6:10652795-10652814 | MsG0680030865.01.T01:CDS | 35.0% |
| ! | TGGTAGATTTTCAACACGAA+CGG | + | Chr6:10652511-10652530 | None:intergenic | 35.0% |
| ! | TGTCCAAAAGTGTAGATTTG+AGG | - | Chr6:10651142-10651161 | MsG0680030865.01.T01:intron | 35.0% |
| !! | TTTATGGTTGGTGGTAGAAT+GGG | - | Chr6:10650472-10650491 | MsG0680030865.01.T01:three_prime_UTR | 35.0% |
| !!! | AATGTTGCACTAGCTTTTTC+CGG | + | Chr6:10652552-10652571 | None:intergenic | 35.0% |
| AACCTTGTAGCAGAAACCAT+AGG | + | Chr6:10650454-10650473 | None:intergenic | 40.0% | |
| AACTACACTACTTGGGCTAA+GGG | - | Chr6:10650511-10650530 | MsG0680030865.01.T01:three_prime_UTR | 40.0% | |
| AAGGGCAAGCATTTCTACAA+TGG | - | Chr6:10650529-10650548 | MsG0680030865.01.T01:three_prime_UTR | 40.0% | |
| CAGATCATCCACTTCACAAT+TGG | - | Chr6:10652388-10652407 | MsG0680030865.01.T01:intron | 40.0% | |
| CGCCATTACTATTTCATCAG+CGG | - | Chr6:10652453-10652472 | MsG0680030865.01.T01:intron | 40.0% | |
| CGTCAATATCGTGTTTGTGT+CGG | + | Chr6:10651444-10651463 | None:intergenic | 40.0% | |
| GGTTTCTGCTACAAGGTTTA+TGG | - | Chr6:10650456-10650475 | MsG0680030865.01.T01:three_prime_UTR | 40.0% | |
| GTTCATAAATAGTGCCAGTG+TGG | + | Chr6:10651649-10651668 | None:intergenic | 40.0% | |
| TACTATTTCATCAGCGGCAA+AGG | - | Chr6:10652459-10652478 | MsG0680030865.01.T01:intron | 40.0% | |
| TCCAGTTGTCCTTCTATGTT+TGG | - | Chr6:10651585-10651604 | MsG0680030865.01.T01:intron | 40.0% | |
| TCTGCTACAAGGTTTATGGT+TGG | - | Chr6:10650460-10650479 | MsG0680030865.01.T01:three_prime_UTR | 40.0% | |
| TGCCGCTGATGAAATAGTAA+TGG | + | Chr6:10652458-10652477 | None:intergenic | 40.0% | |
| TGTTCTTGTCATGTTGCCTA+TGG | - | Chr6:10650435-10650454 | MsG0680030865.01.T01:three_prime_UTR | 40.0% | |
| TTCCAAGCACTTTCATGGAT+TGG | + | Chr6:10652223-10652242 | None:intergenic | 40.0% | |
| TTGTGACAAGCACAACAACA+AGG | + | Chr6:10651404-10651423 | None:intergenic | 40.0% | |
| ! | AATTAAGCCATGGATTGAGG+AGG | + | Chr6:10651766-10651785 | None:intergenic | 40.0% |
| ! | ATTAAGCCATGGATTGAGGA+GGG | + | Chr6:10651765-10651784 | None:intergenic | 40.0% |
| ! | GCAAATTAAGCCATGGATTG+AGG | + | Chr6:10651769-10651788 | None:intergenic | 40.0% |
| ! | TGCCCTCAAATCTACACTTT+TGG | + | Chr6:10651148-10651167 | None:intergenic | 40.0% |
| !! | AGCACTTTCATGGATTGGAT+TGG | + | Chr6:10652218-10652237 | None:intergenic | 40.0% |
| !! | ATCCAATCCATGAAAGTGCT+TGG | - | Chr6:10652218-10652237 | MsG0680030865.01.T01:intron | 40.0% |
| !! | GTTTATGGTTGGTGGTAGAA+TGG | - | Chr6:10650471-10650490 | MsG0680030865.01.T01:three_prime_UTR | 40.0% |
| !!! | TAGCTATTTTAGGACCACAC+TGG | - | Chr6:10651632-10651651 | MsG0680030865.01.T01:intron | 40.0% |
| !!! | TTTTGCTATTGGTGCAGCAT+GGG | - | Chr6:10652611-10652630 | MsG0680030865.01.T01:intron | 40.0% |
| !!! | TTTTTGCTATTGGTGCAGCA+TGG | - | Chr6:10652610-10652629 | MsG0680030865.01.T01:intron | 40.0% |
| AATGAGGTTAAAGGGTGGTG+TGG | - | Chr6:10652778-10652797 | MsG0680030865.01.T01:CDS | 45.0% | |
| ATCCATGTAGCGATCCTACT+TGG | + | Chr6:10652065-10652084 | None:intergenic | 45.0% | |
| ATGTAGCGATCCTACTTGGT+GGG | + | Chr6:10652061-10652080 | None:intergenic | 45.0% | |
| CAACTACACTACTTGGGCTA+AGG | - | Chr6:10650510-10650529 | MsG0680030865.01.T01:three_prime_UTR | 45.0% | |
| CAATTTCCCTCCTCAATCCA+TGG | - | Chr6:10651756-10651775 | MsG0680030865.01.T01:intron | 45.0% | |
| CCACCCTTTAACCTCATTTG+AGG | + | Chr6:10652776-10652795 | None:intergenic | 45.0% | |
| CCACTTCACAATTGGACAAC+CGG | - | Chr6:10652396-10652415 | MsG0680030865.01.T01:intron | 45.0% | |
| CCTCAAATGAGGTTAAAGGG+TGG | - | Chr6:10652773-10652792 | MsG0680030865.01.T01:CDS | 45.0% | |
| GCCAAACATAGAAGGACAAC+TGG | + | Chr6:10651589-10651608 | None:intergenic | 45.0% | |
| GCTACAAGGTTTATGGTTGG+TGG | - | Chr6:10650463-10650482 | MsG0680030865.01.T01:three_prime_UTR | 45.0% | |
| TAATGGCGAGTCACGTTCAA+TGG | + | Chr6:10652441-10652460 | None:intergenic | 45.0% | |
| TGCCTATGGTTTCTGCTACA+AGG | - | Chr6:10650449-10650468 | MsG0680030865.01.T01:three_prime_UTR | 45.0% | |
| ! | AGCGGCAAAGGATTTTGCTT+TGG | - | Chr6:10652471-10652490 | MsG0680030865.01.T01:intron | 45.0% |
| ! | CAAGTCTTATCCCACCAAGT+AGG | - | Chr6:10652048-10652067 | MsG0680030865.01.T01:intron | 45.0% |
| ! | CATGGATTGAGGAGGGAAAT+TGG | + | Chr6:10651758-10651777 | None:intergenic | 45.0% |
| ! | CTACTTGGTGGGATAAGACT+TGG | + | Chr6:10652050-10652069 | None:intergenic | 45.0% |
| ! | GGCAAAGGATTTTGCTTTGG+TGG | - | Chr6:10652474-10652493 | MsG0680030865.01.T01:intron | 45.0% |
| !! | TGTAAATTTAAAAATAAATT+TGG | - | Chr6:10651236-10651255 | MsG0680030865.01.T01:intron | 5.0% |
| AACGACATCTCTTCCAGCTC+CGG | + | Chr6:10652418-10652437 | None:intergenic | 50.0% | |
| CACCAAGTAGGATCGCTACA+TGG | - | Chr6:10652060-10652079 | MsG0680030865.01.T01:intron | 50.0% | |
| CATGTAGCGATCCTACTTGG+TGG | + | Chr6:10652062-10652081 | None:intergenic | 50.0% | |
| CCGGTTGTCCAATTGTGAAG+TGG | + | Chr6:10652399-10652418 | None:intergenic | 50.0% | |
| ! | TTTTCCGGTGCAGCTTTTGG+TGG | + | Chr6:10652537-10652556 | None:intergenic | 50.0% |
| !! | GCTTTTTCCGGTGCAGCTTT+TGG | + | Chr6:10652540-10652559 | None:intergenic | 50.0% |
| !! | TGGTTGGTGGTAGAATGGGT+TGG | - | Chr6:10650476-10650495 | MsG0680030865.01.T01:three_prime_UTR | 50.0% |
| ACCACCACCAAAAGCTGCAC+CGG | - | Chr6:10652530-10652549 | MsG0680030865.01.T01:intron | 55.0% | |
| CACAATTGGACAACCGGAGC+TGG | - | Chr6:10652402-10652421 | MsG0680030865.01.T01:intron | 55.0% | |
| ! | TCCGGTGCAGCTTTTGGTGG+TGG | + | Chr6:10652534-10652553 | None:intergenic | 60.0% |
| !!! | GGTGCAGCTTTTGGTGGTGG+TGG | + | Chr6:10652531-10652550 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 10650276 | 10652939 | 10650276 | ID=MsG0680030865.01;Name=MsG0680030865.01 |
| Chr6 | mRNA | 10650276 | 10652939 | 10650276 | ID=MsG0680030865.01.T01;Parent=MsG0680030865.01;Name=MsG0680030865.01.T01;_AED=0.48;_eAED=0.48;_QI=85|1|1|1|1|1|2|283|179 |
| Chr6 | exon | 10650276 | 10650896 | 10650276 | ID=MsG0680030865.01.T01:exon:8107;Parent=MsG0680030865.01.T01 |
| Chr6 | exon | 10652653 | 10652939 | 10652653 | ID=MsG0680030865.01.T01:exon:8106;Parent=MsG0680030865.01.T01 |
| Chr6 | five_prime_UTR | 10652855 | 10652939 | 10652855 | ID=MsG0680030865.01.T01:five_prime_utr;Parent=MsG0680030865.01.T01 |
| Chr6 | CDS | 10652653 | 10652854 | 10652653 | ID=MsG0680030865.01.T01:cds;Parent=MsG0680030865.01.T01 |
| Chr6 | CDS | 10650559 | 10650896 | 10650559 | ID=MsG0680030865.01.T01:cds;Parent=MsG0680030865.01.T01 |
| Chr6 | three_prime_UTR | 10650276 | 10650558 | 10650276 | ID=MsG0680030865.01.T01:three_prime_utr;Parent=MsG0680030865.01.T01 |
| Gene Sequence |
| Protein sequence |
