AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580026059.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026059.01.T01 MTR_5g038620 87.649 753 55 4 69 819 1 717 0.0 1202
MsG0580026059.01.T01 MTR_4g108140 32.197 528 280 18 72 565 2 485 4.25e-47 177
MsG0580026059.01.T01 MTR_4g108140 50.962 104 49 1 716 819 474 575 7.29e-19 91.7
MsG0580026059.01.T01 MTR_4g108140 32.197 528 281 17 72 565 2 486 5.07e-47 177
MsG0580026059.01.T01 MTR_4g108140 50.962 104 49 1 716 819 475 576 6.94e-19 91.7
MsG0580026059.01.T01 MTR_1g023760 33.333 189 124 2 134 321 72 259 3.04e-18 90.1
MsG0580026059.01.T01 MTR_5g038610 63.492 63 23 0 22 84 1 63 3.07e-18 80.1
MsG0580026059.01.T01 MTR_0019s0070 32.667 150 78 3 188 328 118 253 1.15e-14 77.8
MsG0580026059.01.T01 MTR_1g101330 34.483 145 79 4 184 321 110 245 6.57e-14 75.5
MsG0580026059.01.T01 MTR_6g025770 47.253 91 46 1 3 91 14 104 1.20e-13 70.5
MsG0580026059.01.T01 MTR_6g445010 45.714 70 30 2 3 64 31 100 1.81e-12 66.2
MsG0580026059.01.T01 MTR_8g102400 32.743 113 55 2 139 251 85 176 1.84e-11 67.4
MsG0580026059.01.T01 MTR_8g024540 44.444 72 31 1 181 243 112 183 2.30e-11 67.8
MsG0580026059.01.T01 MTR_1g103070 44.118 68 38 0 189 256 138 205 2.45e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580026059.01.T01 AT1G14380 31.935 429 224 11 72 473 2 389 1.79e-41 161
MsG0580026059.01.T01 AT1G14380 48.148 108 51 3 715 819 489 594 1.11e-17 88.2
MsG0580026059.01.T01 AT1G14380 31.935 429 224 11 72 473 2 389 1.79e-41 161
MsG0580026059.01.T01 AT1G14380 48.148 108 51 3 715 819 489 594 1.11e-17 88.2
MsG0580026059.01.T01 AT1G14380 31.935 429 224 11 72 473 2 389 1.79e-41 161
MsG0580026059.01.T01 AT1G14380 48.148 108 51 3 715 819 489 594 1.11e-17 88.2
MsG0580026059.01.T01 AT1G14380 33.903 351 184 9 72 412 2 314 3.52e-41 161
MsG0580026059.01.T01 AT1G14380 48.148 108 51 3 715 819 551 656 9.75e-18 88.6
MsG0580026059.01.T01 AT1G14380 33.903 351 184 9 72 412 2 314 3.52e-41 161
MsG0580026059.01.T01 AT1G14380 48.148 108 51 3 715 819 551 656 9.75e-18 88.6
MsG0580026059.01.T01 AT1G14380 33.903 351 184 9 72 412 2 314 3.52e-41 161
MsG0580026059.01.T01 AT1G14380 48.148 108 51 3 715 819 551 656 9.75e-18 88.6
MsG0580026059.01.T01 AT1G14380 33.903 351 184 9 72 412 2 314 5.71e-41 159
MsG0580026059.01.T01 AT1G14380 48.148 108 51 3 715 819 461 566 1.31e-17 87.8
MsG0580026059.01.T01 AT1G18840 33.702 362 183 10 69 397 1 338 9.80e-40 155
MsG0580026059.01.T01 AT1G18840 33.702 362 183 10 69 397 1 338 9.80e-40 155
MsG0580026059.01.T01 AT1G18840 33.702 362 183 10 69 397 1 338 9.80e-40 155
MsG0580026059.01.T01 AT2G02790 34.574 376 189 11 69 427 1 336 6.78e-37 147
MsG0580026059.01.T01 AT2G02790 51.485 101 48 1 716 815 485 585 2.43e-21 99.8
MsG0580026059.01.T01 AT2G02790 34.574 376 189 11 69 427 1 336 6.78e-37 147
MsG0580026059.01.T01 AT2G02790 51.485 101 48 1 716 815 485 585 2.43e-21 99.8
MsG0580026059.01.T01 AT2G02790 34.574 376 189 11 69 427 1 336 1.78e-36 147
MsG0580026059.01.T01 AT2G02790 50.467 107 52 1 716 821 485 591 7.58e-22 101
MsG0580026059.01.T01 AT1G74690 33.803 355 197 11 69 404 1 336 1.99e-36 146
MsG0580026059.01.T01 AT1G74690 44.944 89 48 1 732 819 491 579 9.05e-11 65.9
MsG0580026059.01.T01 AT1G19870 36.232 138 77 3 185 321 29 156 1.26e-18 91.3
MsG0580026059.01.T01 AT1G19870 36.232 138 77 3 185 321 212 339 1.75e-18 91.3
MsG0580026059.01.T01 AT4G14750 32.461 191 101 7 68 251 59 228 2.69e-15 79.7
MsG0580026059.01.T01 AT4G14750 32.632 190 100 7 69 251 1 169 2.90e-15 79.0
MsG0580026059.01.T01 AT4G14750 32.461 191 101 7 68 251 59 228 2.96e-15 79.7
MsG0580026059.01.T01 AT5G07240 50.000 60 30 0 188 247 107 166 7.37e-12 68.6
MsG0580026059.01.T01 AT5G07240 50.847 59 29 0 189 247 154 212 8.96e-12 68.6
MsG0580026059.01.T01 AT3G51380 46.970 66 35 0 182 247 32 97 1.82e-11 62.0
MsG0580026059.01.T01 AT2G26180 45.714 70 36 1 171 238 66 135 5.81e-11 65.9

Find 180 sgRNAs with CRISPR-Local

Find 399 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAAGTTTCTTCTTCAATTT+TGG 0.131596 5:-29949388 None:intergenic
CCACCATAACCTACCTTTCT+TGG 0.149275 5:-29944343 None:intergenic
GTAACAATGCCGATAGATTT+TGG 0.176558 5:-29948534 None:intergenic
TCCAAGACCTTTCTCTTCTT+TGG 0.182427 5:-29950076 None:intergenic
CTTTCACGGCAGGTGATTTC+CGG 0.192974 5:-29949450 None:intergenic
TCTGAGACCTTTCTCTTCTT+TGG 0.196588 5:-29950382 None:intergenic
CTGCCATTCAAGCTCTTCTT+TGG 0.209892 5:-29950357 None:intergenic
TCCAAGACTGTTCTCTTCTT+TGG 0.245736 5:-29949923 None:intergenic
CCACCATTTGAGCTCTTCTT+TGG 0.254127 5:-29949820 None:intergenic
GGCTTATCGTTGTTCTCTTC+TGG 0.254394 5:-29949955 None:intergenic
GTTGGACAAGGTCAAGCTTT+TGG 0.259433 5:+29949356 MsG0580026059.01.T01:CDS
AAAGAATCCACAGTTGAAAT+TGG 0.265796 5:-29947289 None:intergenic
CCACCATTTAAGCTCTTCTT+TGG 0.273624 5:-29950129 None:intergenic
CTGCCATTTAAGCTCTTCTT+TGG 0.277905 5:-29949898 None:intergenic
TCCAAGACCTTTCTCTGCTT+TGG 0.279284 5:-29950304 None:intergenic
CAAATATCTGCACCAATATC+TGG 0.285257 5:+29947313 MsG0580026059.01.T01:CDS
CCGCCACTTACGCTCTTCTT+TGG 0.286225 5:-29950051 None:intergenic
CCGCCATTTAAGCTCTTCTT+TGG 0.309644 5:-29949976 None:intergenic
CCGCCATTTAAGCTCTTCTT+TGG 0.309644 5:-29950204 None:intergenic
CCGCCACTTAAGCTCTTCTT+TGG 0.309857 5:-29950279 None:intergenic
AAGCCAAAGAAGAGCTTAAA+TGG 0.320805 5:+29949895 MsG0580026059.01.T01:CDS
AAGCCAAAGAAGAGCTTAAA+TGG 0.320805 5:+29949973 MsG0580026059.01.T01:CDS
AAGCCAAAGAAGAGCTTAAA+TGG 0.320805 5:+29950201 MsG0580026059.01.T01:CDS
AAGCCAAAGAAGAGCTTAAA+TGG 0.322191 5:+29950126 MsG0580026059.01.T01:CDS
GCAACATTAGCTCCAGATAT+TGG 0.324752 5:-29947325 None:intergenic
CTGAAAAGGCACAAGTTAAA+AGG 0.331400 5:+29949422 MsG0580026059.01.T01:CDS
GTCTGCTTGCAGAGGCTATC+AGG 0.334525 5:+29947510 MsG0580026059.01.T01:CDS
AATGTTAGACGTTCTGATAC+TGG 0.344668 5:+29948239 MsG0580026059.01.T01:CDS
CAGGCAGTGAAGCTCTTCTT+TGG 0.344810 5:-29950539 None:intergenic
GCTGATGAGGGCTCAAGTTC+TGG 0.345997 5:+29949472 MsG0580026059.01.T01:CDS
AACTCGGCACTCTTGGACTT+GGG 0.347370 5:-29950599 None:intergenic
AGGATGGTGAGTTGGCAATA+TGG 0.364993 5:+29944271 MsG0580026059.01.T01:CDS
GCCATATAACTCGGCACTCT+TGG 0.374824 5:-29950606 None:intergenic
TCCAAGAGTGCCGAGTTATA+TGG 0.386156 5:+29950605 MsG0580026059.01.T01:CDS
AAGGTAGGAGATGAAGAAAT+AGG 0.392384 5:+29950468 MsG0580026059.01.T01:CDS
TGACTCGGTGTCGGCTGAAA+AGG 0.392618 5:+29949408 MsG0580026059.01.T01:CDS
AAAGGATTCAAATCACTCAT+TGG 0.395796 5:+29949522 MsG0580026059.01.T01:CDS
ATGATATCAGTAGCAAATCT+TGG 0.399401 5:-29950672 None:intergenic
GGATGGTGAGTTGGCAATAT+GGG 0.403176 5:+29944272 MsG0580026059.01.T01:CDS
TCTATCAACATTGAGAACTA+TGG 0.408576 5:-29944305 None:intergenic
GGCATTTGATACTAACTTCT+CGG 0.408659 5:+29944228 MsG0580026059.01.T01:CDS
TGATCTTGGAGAACCTTACT+TGG 0.410168 5:+29949315 MsG0580026059.01.T01:CDS
AACTTCATTGAAGGCTCGTC+GGG 0.417085 5:+29948085 MsG0580026059.01.T01:intron
TGAGCCCTCATCAGCTTTCA+CGG 0.420821 5:-29949464 None:intergenic
TCTTCACTTAACAGCAAGTC+AGG 0.421600 5:+29950732 MsG0580026059.01.T01:CDS
TGATATCAGTAGCAAATCTT+GGG 0.424517 5:-29950671 None:intergenic
GTCAAAGAAGAGAAAGGTCT+TGG 0.427941 5:+29949844 MsG0580026059.01.T01:CDS
ATAAATCTCTGTCATCTTCA+AGG 0.431656 5:+29950817 MsG0580026059.01.T01:CDS
CTATCGCTAAATAGTGATCT+TGG 0.432037 5:+29949301 MsG0580026059.01.T01:CDS
TTCTGTCCAAGACCTTTCTC+AGG 0.432297 5:-29949772 None:intergenic
GTCAAGGAAGAGAAAGATCT+TGG 0.435270 5:+29950000 MsG0580026059.01.T01:CDS
GCCAAAGAAGAGAAAGGTCT+TGG 0.435662 5:+29950075 MsG0580026059.01.T01:CDS
TCTTGCCCTGAGAAAGGTCT+TGG 0.436010 5:+29949766 MsG0580026059.01.T01:CDS
GATGTTTCAGAGCAGGGGCC+AGG 0.436095 5:+29949694 MsG0580026059.01.T01:CDS
TTCTGCTTTATATTGTTTGA+AGG 0.436691 5:+29948181 MsG0580026059.01.T01:CDS
AAGGAAGAAGTCCTGGGAAA+TGG 0.438773 5:+29946960 MsG0580026059.01.T01:CDS
GCCAAAGCAGAGAAAGGTCT+TGG 0.440912 5:+29950303 MsG0580026059.01.T01:CDS
GAAAGCAGTGCTTTCAGAAA+AGG 0.446897 5:+29947348 MsG0580026059.01.T01:CDS
AATCCAAGAAAGGTAGGTTA+TGG 0.452093 5:+29944340 MsG0580026059.01.T01:CDS
TCACTCATTGGTTTCAGCTC+AGG 0.453397 5:+29949534 MsG0580026059.01.T01:CDS
CTTCGAAGTGGCTTGACCGT+TGG 0.453863 5:+29949338 MsG0580026059.01.T01:CDS
AGAAAAGAAAACACAGCTCT+AGG 0.454796 5:+29949647 MsG0580026059.01.T01:CDS
TTCAAAGAAGAGAAAGATGT+TGG 0.458543 5:+29950153 MsG0580026059.01.T01:CDS
TCTCTCAAATGGAGATGAAA+AGG 0.465118 5:+29947405 MsG0580026059.01.T01:CDS
AAGCCAAAGAAGAGCTCAAA+TGG 0.466804 5:+29949817 MsG0580026059.01.T01:CDS
CAGACAGAAAGCACTAGAAC+AGG 0.470431 5:+29950401 MsG0580026059.01.T01:CDS
GAGAGGGATATTCTCTCAAA+TGG 0.470522 5:+29947394 MsG0580026059.01.T01:CDS
CTGATAACTTTGAGCGGAAG+AGG 0.471793 5:+29950780 MsG0580026059.01.T01:CDS
TTTCACGGCAGGTGATTTCC+GGG 0.473542 5:-29949449 None:intergenic
TTCGAGTAACAAGGATGCAC+TGG 0.473941 5:+29947240 MsG0580026059.01.T01:CDS
CTCTGTCATCTTCAAGGGAC+GGG 0.476009 5:+29950823 MsG0580026059.01.T01:CDS
ATGGGGAAAGGAAGAAGTCC+TGG 0.479376 5:+29946953 MsG0580026059.01.T01:CDS
AGCTCTTATTCGTGGTCACT+TGG 0.479958 5:+29948142 MsG0580026059.01.T01:CDS
AAAGCGCAAGAAGAGAATAA+TGG 0.480554 5:+29950102 MsG0580026059.01.T01:CDS
AAAGCGCAAGAAGAGAATAA+TGG 0.480554 5:+29950330 MsG0580026059.01.T01:CDS
CCCTCATCAGCTTTCACGGC+AGG 0.480653 5:-29949460 None:intergenic
AAGCCAAAGAAGAGCTTGAA+TGG 0.481386 5:+29950354 MsG0580026059.01.T01:CDS
TCTTGATCATTAAAATTAGC+AGG 0.485135 5:-29950558 None:intergenic
AGATCACTATTTAGCGATAG+AGG 0.485199 5:-29949298 None:intergenic
TCTGCTTTATATTGTTTGAA+GGG 0.485931 5:+29948182 MsG0580026059.01.T01:CDS
TATTGCCAACTCACCATCCT+AGG 0.485994 5:-29944268 None:intergenic
GGGCAAGACTCTTCTGACTT+TGG 0.487465 5:-29949751 None:intergenic
TAACTCGGCACTCTTGGACT+TGG 0.489798 5:-29950600 None:intergenic
AGCCACTTCGAAGCCAAGTA+AGG 0.490411 5:-29949328 None:intergenic
GAAGTCCTGGGAAATGGATC+AGG 0.490967 5:+29946966 MsG0580026059.01.T01:CDS
TGTTACTGATGTTTCAGAGC+AGG 0.494693 5:+29949687 MsG0580026059.01.T01:CDS
ACCAAAGAAGAGAACAGTCT+TGG 0.501850 5:+29949922 MsG0580026059.01.T01:CDS
AATCAGCAAAAGCTAGGCTA+AGG 0.506190 5:+29950637 MsG0580026059.01.T01:CDS
TGGATCAGGAGCTTACTCTC+AGG 0.507002 5:+29946980 MsG0580026059.01.T01:CDS
CGCGTTGACAAATCCAAGAA+AGG 0.521401 5:+29944330 MsG0580026059.01.T01:CDS
GAAGAGTCTTGCCCTGAGAA+AGG 0.521918 5:+29949760 MsG0580026059.01.T01:CDS
AAGCCAAAGAAGAGCTTAAG+TGG 0.524060 5:+29950276 MsG0580026059.01.T01:CDS
TCTTGAGACACTCAGGCTTA+CGG 0.526578 5:+29947468 MsG0580026059.01.T01:CDS
AAGTATGGGGCTTACTCACC+AGG 0.527622 5:+29944207 None:intergenic
ATGTTAGACGTTCTGATACT+GGG 0.528849 5:+29948240 MsG0580026059.01.T01:CDS
CTTACAGACTAGTGTGAAGA+AGG 0.530864 5:+29950449 MsG0580026059.01.T01:CDS
GTTACTGATGTTTCAGAGCA+GGG 0.534754 5:+29949688 MsG0580026059.01.T01:CDS
CAGCTGCAAGCTCTTATTCG+TGG 0.539642 5:+29948134 MsG0580026059.01.T01:CDS
ATACTCGTGCTCATACTCCT+AGG 0.541193 5:+29944251 MsG0580026059.01.T01:CDS
AGATGAAAAGGCTCAGGCAC+CGG 0.542766 5:+29947417 MsG0580026059.01.T01:CDS
AAATGGAGATGAAAAGGCTC+AGG 0.543410 5:+29947411 MsG0580026059.01.T01:CDS
CAGACTAGTGTGAAGAAGGT+AGG 0.543608 5:+29950453 MsG0580026059.01.T01:CDS
ATTGTTGACGTGATGGGGAA+AGG 0.545375 5:+29946941 MsG0580026059.01.T01:CDS
ACTCAATGTCCAAAATCTAT+CGG 0.549474 5:+29948525 MsG0580026059.01.T01:CDS
GAAAAGAAAACACAGCTCTA+GGG 0.549824 5:+29949648 MsG0580026059.01.T01:CDS
GAGCTTAAATGGCGGTGTCA+AGG 0.550330 5:+29949984 MsG0580026059.01.T01:CDS
AGAAAATGCCTTTGTTCACC+AGG 0.551079 5:+29948581 MsG0580026059.01.T01:CDS
GGCGGTGCCAAAGCAGAGAA+AGG 0.554921 5:+29950297 MsG0580026059.01.T01:CDS
AGAAGTTAGTATCAAATGCC+TGG 0.555359 5:-29944225 None:intergenic
GCAGCGATTGTTGACGTGAT+GGG 0.556489 5:+29946935 MsG0580026059.01.T01:intron
CGACTGAATCAGCAAAAGCT+AGG 0.556769 5:+29950631 MsG0580026059.01.T01:CDS
AATTGTTAAAGTGCAAGCAT+TGG 0.557493 5:+29948205 MsG0580026059.01.T01:CDS
TCATCTTCAAGGGACGGGAC+TGG 0.557763 5:+29950828 MsG0580026059.01.T01:CDS
ACGTTCTGATACTGGGCTTG+AGG 0.558336 5:+29948247 MsG0580026059.01.T01:CDS
AAGCCAAAGAAGAGCGTAAG+TGG 0.558887 5:+29950048 MsG0580026059.01.T01:CDS
TAATAAGTCATCACATGAGA+GGG 0.560618 5:+29947378 MsG0580026059.01.T01:CDS
GTCTAATCCAATTTCAACTG+TGG 0.561495 5:+29947282 MsG0580026059.01.T01:CDS
ACCTGCCGTGAAAGCTGATG+AGG 0.565649 5:+29949459 MsG0580026059.01.T01:CDS
GGTGGTGTCAAAGAAGAGAA+AGG 0.565727 5:+29949838 MsG0580026059.01.T01:CDS
GGAGTTAGCGAAGACTTGAA+TGG 0.567098 5:+29950489 MsG0580026059.01.T01:CDS
ATCAGCAAAAGCTAGGCTAA+GGG 0.567639 5:+29950638 MsG0580026059.01.T01:CDS
AAAGCTAGGCTAAGGGGACA+AGG 0.569700 5:+29950645 MsG0580026059.01.T01:CDS
CCAAGAAAGGTAGGTTATGG+TGG 0.571797 5:+29944343 MsG0580026059.01.T01:CDS
TAACTTCATTGAAGGCTCGT+CGG 0.576552 5:+29948084 MsG0580026059.01.T01:intron
TAAATCTCTGTCATCTTCAA+GGG 0.577185 5:+29950818 MsG0580026059.01.T01:CDS
GGCAGTGCCAAAGAAGAGAA+AGG 0.578082 5:+29950375 MsG0580026059.01.T01:CDS
AAGATGATCTTGAGACACTC+AGG 0.580261 5:+29947461 MsG0580026059.01.T01:CDS
ACTCGGCACTCTTGGACTTG+GGG 0.581156 5:-29950598 None:intergenic
CTAGTCTGTAAGACAGCAGT+AGG 0.581177 5:-29950438 None:intergenic
CAGCGATTGTTGACGTGATG+GGG 0.586351 5:+29946936 MsG0580026059.01.T01:intron
GGATCAGGAGCTTACTCTCA+GGG 0.586360 5:+29946981 MsG0580026059.01.T01:CDS
GAGTTGGCAATATGGGGATG+AGG 0.587049 5:+29944279 MsG0580026059.01.T01:CDS
GAAGAAACTTGACTCGGTGT+CGG 0.588481 5:+29949399 MsG0580026059.01.T01:CDS
ATACTCCTAGGATGGTGAGT+TGG 0.589471 5:+29944263 MsG0580026059.01.T01:CDS
TCTGTCCAAGACCTTTCTCA+GGG 0.589944 5:-29949771 None:intergenic
AAGCTCCTGATCCATTTCCC+AGG 0.592908 5:-29946971 None:intergenic
CCTGCCGTGAAAGCTGATGA+GGG 0.596782 5:+29949460 MsG0580026059.01.T01:CDS
AACCTTACTTGGCTTCGAAG+TGG 0.602005 5:+29949326 MsG0580026059.01.T01:CDS
CACAAGTTAAAAGGACTACC+CGG 0.602610 5:+29949431 MsG0580026059.01.T01:CDS
GGCGGTGCCAAAGAAGAGAA+AGG 0.603794 5:+29950069 MsG0580026059.01.T01:CDS
AGATGAAAGTGAATGCCTCC+TGG 0.603995 5:-29950712 None:intergenic
TTAATAAGTCATCACATGAG+AGG 0.605684 5:+29947377 MsG0580026059.01.T01:CDS
AAACTTCAGTCTGCTTGCAG+AGG 0.606146 5:+29947502 MsG0580026059.01.T01:CDS
TTGACAAATCCAAGAAAGGT+AGG 0.608932 5:+29944334 MsG0580026059.01.T01:CDS
AGCAGCGATTGTTGACGTGA+TGG 0.609674 5:+29946934 MsG0580026059.01.T01:intron
TCTCTGTCATCTTCAAGGGA+CGG 0.611971 5:+29950822 MsG0580026059.01.T01:CDS
AAAAGCTTGACCTTGTCCAA+CGG 0.615531 5:-29949354 None:intergenic
AGTGGCTTGACCGTTGGACA+AGG 0.615551 5:+29949344 MsG0580026059.01.T01:CDS
TCGTGCTCATACTCCTAGGA+TGG 0.616016 5:+29944255 MsG0580026059.01.T01:CDS
GATGCAACATTAGCAACGGC+CGG 0.617861 5:-29947436 None:intergenic
TCGAGTAACAAGGATGCACT+GGG 0.618488 5:+29947241 MsG0580026059.01.T01:CDS
TTACTGATGTTTCAGAGCAG+GGG 0.623308 5:+29949689 MsG0580026059.01.T01:CDS
TGAGGTCCTGAAAGTTCGCA+AGG 0.629107 5:+29948265 MsG0580026059.01.T01:CDS
TTAGCGATAGAGGAAACGCA+TGG 0.630241 5:-29949288 None:intergenic
ATCAGGAGCTTACTCTCAGG+GGG 0.630920 5:+29946983 MsG0580026059.01.T01:CDS
GTAGAAATCTTCGAGTAACA+AGG 0.636686 5:+29947231 MsG0580026059.01.T01:intron
TGAGCGGAAGAGGAGTTGCA+AGG 0.636898 5:+29950790 MsG0580026059.01.T01:CDS
AAAGTGCAAGCATTGGCTCG+TGG 0.637631 5:+29948212 MsG0580026059.01.T01:CDS
TTGAGATGCAACATTAGCAA+CGG 0.640449 5:-29947440 None:intergenic
GATGGTGAGTTGGCAATATG+GGG 0.645581 5:+29944273 MsG0580026059.01.T01:CDS
TCAGCAAAAGCTAGGCTAAG+GGG 0.647323 5:+29950639 MsG0580026059.01.T01:CDS
AGTTCCTACCTGGTGAACAA+AGG 0.648285 5:-29948589 None:intergenic
GAAAAGCTGATAACTTTGAG+CGG 0.650199 5:+29950774 MsG0580026059.01.T01:CDS
TGGGGAAAGGAAGAAGTCCT+GGG 0.653494 5:+29946954 MsG0580026059.01.T01:CDS
CGGCATTGTTACATCTACAC+CGG 0.653591 5:+29948545 MsG0580026059.01.T01:CDS
CCAAAGAAGAGCTTAAATGG+TGG 0.659702 5:+29950129 MsG0580026059.01.T01:CDS
TCAGTCGGAGCCATATAACT+CGG 0.661998 5:-29950615 None:intergenic
CCAAAGAAGAGCTCAAATGG+TGG 0.663791 5:+29949820 MsG0580026059.01.T01:CDS
GATATCAGTAGCAAATCTTG+GGG 0.666334 5:-29950670 None:intergenic
CAGAAAGCACTAGAACAGGA+AGG 0.674738 5:+29950405 MsG0580026059.01.T01:CDS
TAGCGATAGAGGAAACGCAT+GGG 0.677774 5:-29949287 None:intergenic
TGAGAAAATGAAAGAAACGA+CGG 0.688170 5:+29949726 MsG0580026059.01.T01:CDS
ATTGAAGAAGAAACTTGACT+CGG 0.691260 5:+29949393 MsG0580026059.01.T01:CDS
CCAAAGAAGAGCGTAAGTGG+CGG 0.702919 5:+29950051 MsG0580026059.01.T01:CDS
GATCAGGAGCTTACTCTCAG+GGG 0.703576 5:+29946982 MsG0580026059.01.T01:CDS
CCAAAGAAGAGCTTAAGTGG+CGG 0.710668 5:+29950279 MsG0580026059.01.T01:CDS
GTTAGCGAAGACTTGAATGG+CGG 0.720405 5:+29950492 MsG0580026059.01.T01:CDS
CCAAAGAAGAGCTTAAATGG+CGG 0.731508 5:+29949976 MsG0580026059.01.T01:CDS
CCAAAGAAGAGCTTAAATGG+CGG 0.731508 5:+29950204 MsG0580026059.01.T01:CDS
TCAGGAGCTTACTCTCAGGG+GGG 0.780339 5:+29946984 MsG0580026059.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAAAAATGTTAACTTTTT+CGG + Chr5:29944875-29944894 MsG0580026059.01.T01:intron 10.0%
!!! TTTTTGTTATGTAAATTTTA+TGG + Chr5:29946814-29946833 MsG0580026059.01.T01:intron 10.0%
!! AAATGGGTATATATAATATT+AGG + Chr5:29946763-29946782 MsG0580026059.01.T01:intron 15.0%
!! AGTATTAATTGAATTAAAGA+AGG + Chr5:29948795-29948814 MsG0580026059.01.T01:intron 15.0%
!! ATTTAGTGTTATATTGTATT+GGG - Chr5:29946046-29946065 None:intergenic 15.0%
!! ATTTATAATCTTAAGTATGT+TGG - Chr5:29944772-29944791 None:intergenic 15.0%
!! TATTTAGTGTTATATTGTAT+TGG - Chr5:29946047-29946066 None:intergenic 15.0%
!! TCATTATTTATCATCTATAT+CGG - Chr5:29948634-29948653 None:intergenic 15.0%
!!! AAATAATGATAGATTGTTTT+AGG + Chr5:29948645-29948664 MsG0580026059.01.T01:intron 15.0%
!!! AACATTTTTATAATCTTATC+CGG - Chr5:29944867-29944886 None:intergenic 15.0%
!!! AATTTTATATTCGATATGAA+TGG + Chr5:29949111-29949130 MsG0580026059.01.T01:intron 15.0%
!!! ATATATTTTGTCAAAAATTG+CGG + Chr5:29947941-29947960 MsG0580026059.01.T01:intron 15.0%
!!! ATGTTATAATTGTTACTTAT+AGG + Chr5:29947149-29947168 MsG0580026059.01.T01:intron 15.0%
!!! TATTGTTTAATTTAGTAATG+AGG + Chr5:29946632-29946651 MsG0580026059.01.T01:intron 15.0%
!!! TGATTTGTTTTTTTTTTTGA+GGG + Chr5:29945150-29945169 MsG0580026059.01.T01:intron 15.0%
!!! TGTTATAATTGTTACTTATA+GGG + Chr5:29947150-29947169 MsG0580026059.01.T01:intron 15.0%
!!! TTGATTTGTTTTTTTTTTTG+AGG + Chr5:29945149-29945168 MsG0580026059.01.T01:intron 15.0%
!! AAAGTGGAATATATTGTATT+GGG - Chr5:29946087-29946106 None:intergenic 20.0%
!! AAATAAAAGTGAAATAGATG+TGG - Chr5:29947825-29947844 None:intergenic 20.0%
!! AACAAATGGTATATAATTGA+TGG + Chr5:29946858-29946877 MsG0580026059.01.T01:intron 20.0%
!! AACAGAAATGTAAAATTACA+GGG - Chr5:29947544-29947563 None:intergenic 20.0%
!! ATAAAATTGCAGAAACAAAA+TGG - Chr5:29947900-29947919 None:intergenic 20.0%
!! ATAATCAATATTTGCAAATG+AGG - Chr5:29945514-29945533 None:intergenic 20.0%
!! CAAGAAAATAATAATAAGTG+TGG + Chr5:29945669-29945688 MsG0580026059.01.T01:intron 20.0%
!! GAAATTATATGAAGAAACTT+CGG - Chr5:29948980-29948999 None:intergenic 20.0%
!! GTTTCTTTATGTATGATTAA+TGG + Chr5:29948033-29948052 MsG0580026059.01.T01:intron 20.0%
!! TAACAGAAATGTAAAATTAC+AGG - Chr5:29947545-29947564 None:intergenic 20.0%
!! TAGCATTTATTTAAGTATGT+TGG - Chr5:29944806-29944825 None:intergenic 20.0%
!! TATATAACAAAGACAAATTC+AGG - Chr5:29948858-29948877 None:intergenic 20.0%
!! TCTTCATATAATTTCAGTTA+AGG + Chr5:29948985-29949004 MsG0580026059.01.T01:intron 20.0%
!! TGTTATAAGGAAACTATTAA+AGG + Chr5:29947119-29947138 MsG0580026059.01.T01:intron 20.0%
!! TTAGTCATATTTCAGATATT+AGG - Chr5:29948675-29948694 None:intergenic 20.0%
!!! AAGAAAAGTGTATAAATGAA+GGG - Chr5:29946111-29946130 None:intergenic 20.0%
!!! AATTTTACATTTCTGTTATG+CGG + Chr5:29947547-29947566 MsG0580026059.01.T01:intron 20.0%
!!! ATAATTTTATTGTTCATGGA+AGG + Chr5:29948735-29948754 MsG0580026059.01.T01:intron 20.0%
!!! ATTCCAAAGGTATTTAAATA+GGG - Chr5:29945079-29945098 None:intergenic 20.0%
!!! GACACTTTTTTTTAGAAAAT+TGG - Chr5:29945977-29945996 None:intergenic 20.0%
!!! GTTGATAATTTTATTGTTCA+TGG + Chr5:29948731-29948750 MsG0580026059.01.T01:intron 20.0%
!!! GTTTTGAAATTAAATTGTCT+TGG + Chr5:29949200-29949219 MsG0580026059.01.T01:intron 20.0%
!!! TAAGAAAAGTGTATAAATGA+AGG - Chr5:29946112-29946131 None:intergenic 20.0%
!!! TAGTTTTGATTGATTTTGAT+GGG + Chr5:29945363-29945382 MsG0580026059.01.T01:intron 20.0%
!!! TATTAGTCTTACATGAAAAT+GGG + Chr5:29946721-29946740 MsG0580026059.01.T01:intron 20.0%
!!! TATTCCAAAGGTATTTAAAT+AGG - Chr5:29945080-29945099 None:intergenic 20.0%
!!! TGAATTTTTCAATTTCTTCA+TGG + Chr5:29946663-29946682 MsG0580026059.01.T01:intron 20.0%
!!! TGTTATGTAAATTTTATGGT+TGG + Chr5:29946818-29946837 MsG0580026059.01.T01:intron 20.0%
!!! TTAGTTTTGATTGATTTTGA+TGG + Chr5:29945362-29945381 MsG0580026059.01.T01:intron 20.0%
!!! TTATTAGTCTTACATGAAAA+TGG + Chr5:29946720-29946739 MsG0580026059.01.T01:intron 20.0%
!!! TTTTCTACTTGTTTGAAAAT+GGG + Chr5:29946747-29946766 MsG0580026059.01.T01:intron 20.0%
!!! TTTTCTCAATTTCTTTCTTT+GGG - Chr5:29949570-29949589 None:intergenic 20.0%
!!! TTTTGTTTCTGCAATTTTAT+TGG + Chr5:29947900-29947919 MsG0580026059.01.T01:intron 20.0%
!!! TTTTTCTACTTGTTTGAAAA+TGG + Chr5:29946746-29946765 MsG0580026059.01.T01:intron 20.0%
! AAAGAAAGAATACCTTAACA+AGG - Chr5:29946284-29946303 None:intergenic 25.0%
! AACATGTAACATTTCTACAT+AGG - Chr5:29946696-29946715 None:intergenic 25.0%
! AAGTAACAAGAAGATATGAA+CGG - Chr5:29944694-29944713 None:intergenic 25.0%
! AATGTCATCAATTCATAACT+CGG - Chr5:29945633-29945652 None:intergenic 25.0%
! ACAGAAATGTAAAATTACAG+GGG - Chr5:29947543-29947562 None:intergenic 25.0%
! ACTAGTATAAAATTGTGTTG+GGG + Chr5:29944460-29944479 MsG0580026059.01.T01:intron 25.0%
! AGAAAAAGTTAAGAGATTGT+TGG - Chr5:29946348-29946367 None:intergenic 25.0%
! AGAAAATTGGTCAGTTATTA+CGG - Chr5:29945964-29945983 None:intergenic 25.0%
! ATAAAATCATATTCTTCGAG+AGG + Chr5:29944628-29944647 MsG0580026059.01.T01:intron 25.0%
! ATGAATGGTATAACAAAGTT+TGG + Chr5:29949126-29949145 MsG0580026059.01.T01:intron 25.0%
! ATTTATTGGAGAGAGAAAAT+AGG + Chr5:29946184-29946203 MsG0580026059.01.T01:intron 25.0%
! CAACTTAAAATCATAACATG+AGG - Chr5:29949060-29949079 None:intergenic 25.0%
! CTTCAAAAAAAACCATCAAA+CGG - Chr5:29945210-29945229 None:intergenic 25.0%
! GAAAGTGGAATATATTGTAT+TGG - Chr5:29946088-29946107 None:intergenic 25.0%
! GAATTTCTTAGTGAAAATGT+TGG + Chr5:29948342-29948361 MsG0580026059.01.T01:intron 25.0%
! GACTAGTATAAAATTGTGTT+GGG + Chr5:29944459-29944478 MsG0580026059.01.T01:intron 25.0%
! TAAAATCATATTCTTCGAGA+GGG + Chr5:29944629-29944648 MsG0580026059.01.T01:intron 25.0%
! TAATAGTTTCCTTATAACAG+AGG - Chr5:29947118-29947137 None:intergenic 25.0%
! TCTGCTTTATATTGTTTGAA+GGG + Chr5:29948182-29948201 MsG0580026059.01.T01:CDS 25.0%
! TCTTGATCATTAAAATTAGC+AGG - Chr5:29950561-29950580 None:intergenic 25.0%
! TGAAAAATCACTTATTCCAA+AGG - Chr5:29945092-29945111 None:intergenic 25.0%
! TGACTAGTATAAAATTGTGT+TGG + Chr5:29944458-29944477 MsG0580026059.01.T01:intron 25.0%
! TTAAGAGATTGTTGGATTAA+GGG - Chr5:29946340-29946359 None:intergenic 25.0%
! TTAATACTAGTAGTGTTTAC+CGG - Chr5:29948783-29948802 None:intergenic 25.0%
! TTCTGCTTTATATTGTTTGA+AGG + Chr5:29948181-29948200 MsG0580026059.01.T01:CDS 25.0%
!! AGAAAAGTGTATAAATGAAG+GGG - Chr5:29946110-29946129 None:intergenic 25.0%
!! ATCAACTGATAACATTTTCA+TGG - Chr5:29948717-29948736 None:intergenic 25.0%
!! ATTTTACATTTCTGTTATGC+GGG + Chr5:29947548-29947567 MsG0580026059.01.T01:intron 25.0%
!! CAAAAGAGATTTGATTTCAT+TGG + Chr5:29945006-29945025 MsG0580026059.01.T01:intron 25.0%
!! CTTTTCTCAATTTCTTTCTT+TGG - Chr5:29949571-29949590 None:intergenic 25.0%
!! GTATATTCTTTTTGTATGAC+AGG - Chr5:29948399-29948418 None:intergenic 25.0%
!! TCAAGTTTCTTCTTCAATTT+TGG - Chr5:29949391-29949410 None:intergenic 25.0%
!! TGTTAAGTGAAAAGTTGTTT+TGG + Chr5:29949018-29949037 MsG0580026059.01.T01:intron 25.0%
!! TTGAAATGAGTCAGTTATTT+TGG - Chr5:29946000-29946019 None:intergenic 25.0%
!!! AAAGGTATTTCATGTTATAG+GGG + Chr5:29945177-29945196 MsG0580026059.01.T01:intron 25.0%
!!! ACTAGATTTTTTCACATCTA+GGG + Chr5:29946451-29946470 MsG0580026059.01.T01:intron 25.0%
!!! AGAAAGGTATTTCATGTTAT+AGG + Chr5:29945175-29945194 MsG0580026059.01.T01:intron 25.0%
!!! AGTACTTTGAATTCTGAAAT+AGG + Chr5:29947177-29947196 MsG0580026059.01.T01:intron 25.0%
!!! AGTTTAGTGTTGTTTTCATT+TGG + Chr5:29945393-29945412 MsG0580026059.01.T01:intron 25.0%
!!! ATTTTTCAACTTGGTTTCTT+TGG + Chr5:29944388-29944407 MsG0580026059.01.T01:intron 25.0%
!!! GAAAGGTATTTCATGTTATA+GGG + Chr5:29945176-29945195 MsG0580026059.01.T01:intron 25.0%
!!! GTTTAGTGTTGTTTTCATTT+GGG + Chr5:29945394-29945413 MsG0580026059.01.T01:intron 25.0%
!!! GTTTGATGGTTTTTTTTGAA+GGG + Chr5:29945209-29945228 MsG0580026059.01.T01:intron 25.0%
!!! TACTAGATTTTTTCACATCT+AGG + Chr5:29946450-29946469 MsG0580026059.01.T01:intron 25.0%
!!! TATTTTTGTAAGTGTTTTCG+TGG + Chr5:29947048-29947067 MsG0580026059.01.T01:intron 25.0%
!!! TCTTAGTATTGGTACTTTAT+TGG + Chr5:29948007-29948026 MsG0580026059.01.T01:intron 25.0%
!!! TGAAATGAGTCAGTTATTTT+GGG - Chr5:29945999-29946018 None:intergenic 25.0%
!!! TTAGTGTTGGTTATGATTTT+GGG + Chr5:29945337-29945356 MsG0580026059.01.T01:intron 25.0%
!!! TTTAGTGTTGGTTATGATTT+TGG + Chr5:29945336-29945355 MsG0580026059.01.T01:intron 25.0%
!!! TTTGATGGTTTTTTTTGAAG+GGG + Chr5:29945210-29945229 MsG0580026059.01.T01:intron 25.0%
!!! TTTGATTTGCTTTGAACAAA+TGG + Chr5:29946844-29946863 MsG0580026059.01.T01:intron 25.0%
!!! TTTTTTTTTGAGGGAAAGAA+AGG + Chr5:29945159-29945178 MsG0580026059.01.T01:intron 25.0%
AAAATCATATTCTTCGAGAG+GGG + Chr5:29944630-29944649 MsG0580026059.01.T01:intron 30.0%
AAAGAATCCACAGTTGAAAT+TGG - Chr5:29947292-29947311 None:intergenic 30.0%
AAAGGATTCAAATCACTCAT+TGG + Chr5:29949522-29949541 MsG0580026059.01.T01:CDS 30.0%
AAATTTGCAGTTGTAGGAAA+AGG + Chr5:29947851-29947870 MsG0580026059.01.T01:intron 30.0%
AAGATTTCTACATACACGAA+TGG - Chr5:29947222-29947241 None:intergenic 30.0%
AATCATAACATGAGGTTGAA+TGG - Chr5:29949052-29949071 None:intergenic 30.0%
ACAAAAACAACGTCCAAAAA+AGG + Chr5:29949504-29949523 MsG0580026059.01.T01:CDS 30.0%
ACTCAATGTCCAAAATCTAT+CGG + Chr5:29948525-29948544 MsG0580026059.01.T01:CDS 30.0%
ACTCCCTATTTAAATACCTT+TGG + Chr5:29945073-29945092 MsG0580026059.01.T01:intron 30.0%
ATAAATCTCTGTCATCTTCA+AGG + Chr5:29950817-29950836 MsG0580026059.01.T01:CDS 30.0%
ATGATATCAGTAGCAAATCT+TGG - Chr5:29950675-29950694 None:intergenic 30.0%
ATTAATTAGAAGTTCCTACC+TGG - Chr5:29948602-29948621 None:intergenic 30.0%
ATTGAAGAAGAAACTTGACT+CGG + Chr5:29949393-29949412 MsG0580026059.01.T01:CDS 30.0%
CATGCAATTTGTCTTAGTAT+TGG + Chr5:29947996-29948015 MsG0580026059.01.T01:intron 30.0%
GAAAATTGGTCAGTTATTAC+GGG - Chr5:29945963-29945982 None:intergenic 30.0%
GTCAAAGAAGAGAAAAATCT+TGG + Chr5:29950228-29950247 MsG0580026059.01.T01:CDS 30.0%
GTTAAGAGATTGTTGGATTA+AGG - Chr5:29946341-29946360 None:intergenic 30.0%
TAAACGAAATTTGCAGTTGT+AGG + Chr5:29947845-29947864 MsG0580026059.01.T01:intron 30.0%
TAAATCTCTGTCATCTTCAA+GGG + Chr5:29950818-29950837 MsG0580026059.01.T01:CDS 30.0%
TAATAAGTCATCACATGAGA+GGG + Chr5:29947378-29947397 MsG0580026059.01.T01:CDS 30.0%
TAATACTAGTAGTGTTTACC+GGG - Chr5:29948782-29948801 None:intergenic 30.0%
TAGACAAAAACAGTTTAACC+AGG + Chr5:29950694-29950713 MsG0580026059.01.T01:CDS 30.0%
TAGTACCTGAAAAAATGAAG+AGG - Chr5:29946435-29946454 None:intergenic 30.0%
TAGTTAGTGAAGCAATACAA+GGG - Chr5:29948482-29948501 None:intergenic 30.0%
TCTATCAACATTGAGAACTA+TGG - Chr5:29944308-29944327 None:intergenic 30.0%
TGAAAACAACACTAAACTGA+TGG - Chr5:29945391-29945410 None:intergenic 30.0%
TGAGAAAATGAAAGAAACGA+CGG + Chr5:29949726-29949745 MsG0580026059.01.T01:CDS 30.0%
TGATATCAGTAGCAAATCTT+GGG - Chr5:29950674-29950693 None:intergenic 30.0%
TTAATAAGTCATCACATGAG+AGG + Chr5:29947377-29947396 MsG0580026059.01.T01:CDS 30.0%
TTCAAAGAAGAGAAAGATGT+TGG + Chr5:29950153-29950172 MsG0580026059.01.T01:CDS 30.0%
TTCTTGCATAACTTCATTGA+AGG + Chr5:29948076-29948095 MsG0580026059.01.T01:intron 30.0%
TTGTATGACAGGAAATCTAT+TGG - Chr5:29948388-29948407 None:intergenic 30.0%
! AACAATTTCAGCATTTTGCT+AGG + Chr5:29945585-29945604 MsG0580026059.01.T01:intron 30.0%
! AACTATATGTAGTTGACTCT+TGG + Chr5:29946549-29946568 MsG0580026059.01.T01:intron 30.0%
! AGTAATGGAGGATATTTGTT+TGG + Chr5:29945243-29945262 MsG0580026059.01.T01:intron 30.0%
! ATTTCATGTTATAGGGGTTT+TGG + Chr5:29945183-29945202 MsG0580026059.01.T01:intron 30.0%
! TTATCAGCTTTTCTACTCTT+GGG - Chr5:29950767-29950786 None:intergenic 30.0%
! TTCTTTCATTTTCTCAGAAG+AGG - Chr5:29949722-29949741 None:intergenic 30.0%
! TTTGACTTTGACTTTAGTGT+TGG + Chr5:29945324-29945343 MsG0580026059.01.T01:intron 30.0%
!! AAAGCAAAGAGTATCGTATA+TGG - Chr5:29945464-29945483 None:intergenic 30.0%
!! CACGATGAAATTTTTCAACT+TGG + Chr5:29944379-29944398 MsG0580026059.01.T01:CDS 30.0%
!! TACTTCAATCTACTTTTCTC+AGG + Chr5:29948500-29948519 MsG0580026059.01.T01:intron 30.0%
!! TTCTTCTTCAATTTTGGAAG+AGG - Chr5:29949385-29949404 None:intergenic 30.0%
!!! CGTTTGATGGTTTTTTTTGA+AGG + Chr5:29945208-29945227 MsG0580026059.01.T01:intron 30.0%
!!! GAGTGATTTGAATCCTTTTT+TGG - Chr5:29949520-29949539 None:intergenic 30.0%
!!! GATTTTTTTTTCTTTCCCTC+TGG + Chr5:29949156-29949175 MsG0580026059.01.T01:intron 30.0%
!!! TAGTGTTGGTTATGATTTTG+GGG + Chr5:29945338-29945357 MsG0580026059.01.T01:intron 30.0%
!!! TTCTTCCTCTTCATTTTTTC+AGG + Chr5:29946427-29946446 MsG0580026059.01.T01:intron 30.0%
AAACTAAACCAAACAACCAG+AGG - Chr5:29949175-29949194 None:intergenic 35.0%
AAAGCGCAAGAAGAGAATAA+TGG + Chr5:29950102-29950121 MsG0580026059.01.T01:CDS 35.0%
AACAAGAAGATATGAACGGT+TGG - Chr5:29944690-29944709 None:intergenic 35.0%
AACTAAACCAAACAACCAGA+GGG - Chr5:29949174-29949193 None:intergenic 35.0%
AAGCCAAAGAAGAGCTTAAA+TGG + Chr5:29949895-29949914 MsG0580026059.01.T01:CDS 35.0%
AAGGTAGGAGATGAAGAAAT+AGG + Chr5:29950468-29950487 MsG0580026059.01.T01:CDS 35.0%
AATCCAAGAAAGGTAGGTTA+TGG + Chr5:29944340-29944359 MsG0580026059.01.T01:CDS 35.0%
AATGTTAGACGTTCTGATAC+TGG + Chr5:29948239-29948258 MsG0580026059.01.T01:CDS 35.0%
ACAAAAACAGTTTAACCAGG+AGG + Chr5:29950697-29950716 MsG0580026059.01.T01:CDS 35.0%
ACTTCATAACGAATGACCTA+AGG - Chr5:29945277-29945296 None:intergenic 35.0%
AGAAAAGAAAACACAGCTCT+AGG + Chr5:29949647-29949666 MsG0580026059.01.T01:CDS 35.0%
AGAAGTTAGTATCAAATGCC+TGG - Chr5:29944228-29944247 None:intergenic 35.0%
AGATCACTATTTAGCGATAG+AGG - Chr5:29949301-29949320 None:intergenic 35.0%
ATGTTAGACGTTCTGATACT+GGG + Chr5:29948240-29948259 MsG0580026059.01.T01:CDS 35.0%
CAAAGTAGGTCAATTATACC+GGG + Chr5:29946147-29946166 MsG0580026059.01.T01:intron 35.0%
CAAATATCTGCACCAATATC+TGG + Chr5:29947313-29947332 MsG0580026059.01.T01:CDS 35.0%
CAGCTGAAATGGATATCATA+TGG - Chr5:29949254-29949273 None:intergenic 35.0%
CATTCGGATGTATCTTACTA+AGG + Chr5:29944591-29944610 MsG0580026059.01.T01:intron 35.0%
CCAAAGTAGGTCAATTATAC+CGG + Chr5:29946146-29946165 MsG0580026059.01.T01:intron 35.0%
CGTTATGAAGTTTGAGGATA+TGG + Chr5:29945286-29945305 MsG0580026059.01.T01:intron 35.0%
CTAAGACAAATTGCATGTGA+TGG - Chr5:29947993-29948012 None:intergenic 35.0%
CTATCGCTAAATAGTGATCT+TGG + Chr5:29949301-29949320 MsG0580026059.01.T01:CDS 35.0%
GAAAAGAAAACACAGCTCTA+GGG + Chr5:29949648-29949667 MsG0580026059.01.T01:CDS 35.0%
GAAAAGCTGATAACTTTGAG+CGG + Chr5:29950774-29950793 MsG0580026059.01.T01:CDS 35.0%
GAGGATCAATATAGTAGTTG+TGG + Chr5:29946206-29946225 MsG0580026059.01.T01:intron 35.0%
GATATCAGTAGCAAATCTTG+GGG - Chr5:29950673-29950692 None:intergenic 35.0%
GGATGTATCTTACTAAGGAT+TGG + Chr5:29944596-29944615 MsG0580026059.01.T01:intron 35.0%
GGCATTTGATACTAACTTCT+CGG + Chr5:29944228-29944247 MsG0580026059.01.T01:CDS 35.0%
GTAGAAATCTTCGAGTAACA+AGG + Chr5:29947231-29947250 MsG0580026059.01.T01:intron 35.0%
GTAGTTAGTGAAGCAATACA+AGG - Chr5:29948483-29948502 None:intergenic 35.0%
GTCATTCGTTATGAAGTTTG+AGG + Chr5:29945280-29945299 MsG0580026059.01.T01:intron 35.0%
GTCTAATCCAATTTCAACTG+TGG + Chr5:29947282-29947301 MsG0580026059.01.T01:CDS 35.0%
GTTTATATGAGTTCAGCTGT+GGG + Chr5:29945115-29945134 MsG0580026059.01.T01:intron 35.0%
TAATGAAGGAGACTACAACA+AGG + Chr5:29944539-29944558 MsG0580026059.01.T01:intron 35.0%
TAATTGCTGCCTCTGTTATA+AGG + Chr5:29947106-29947125 MsG0580026059.01.T01:intron 35.0%
TATTGGAGAGAGAAAATAGG+AGG + Chr5:29946187-29946206 MsG0580026059.01.T01:intron 35.0%
TCTCTCAAATGGAGATGAAA+AGG + Chr5:29947405-29947424 MsG0580026059.01.T01:CDS 35.0%
TCTGTGTGAAAAACCAAAGT+AGG + Chr5:29946133-29946152 MsG0580026059.01.T01:intron 35.0%
TGAAATAGATGTGGTTGCAT+TGG - Chr5:29947816-29947835 None:intergenic 35.0%
TGAATCTCCTAGAACTCATT+CGG + Chr5:29944575-29944594 MsG0580026059.01.T01:intron 35.0%
TGCAAATGAGGAACAGATAT+CGG - Chr5:29945502-29945521 None:intergenic 35.0%
TGTAGTGCACTTAGTAATGA+AGG + Chr5:29944525-29944544 MsG0580026059.01.T01:intron 35.0%
TGTATAAATGAAGGGGAAAG+TGG - Chr5:29946103-29946122 None:intergenic 35.0%
TGTGTTTCATCAGCTTTACT+AGG + Chr5:29944729-29944748 MsG0580026059.01.T01:intron 35.0%
TGTTTATATGAGTTCAGCTG+TGG + Chr5:29945114-29945133 MsG0580026059.01.T01:intron 35.0%
TTACCGGGAGAAAAAAAAAG+AGG - Chr5:29948767-29948786 None:intergenic 35.0%
TTCGCAAGGTAAAAGTTCTT+TGG + Chr5:29948279-29948298 MsG0580026059.01.T01:intron 35.0%
TTGACAAATCCAAGAAAGGT+AGG + Chr5:29944334-29944353 MsG0580026059.01.T01:CDS 35.0%
TTGAGATGCAACATTAGCAA+CGG - Chr5:29947443-29947462 None:intergenic 35.0%
TTGGTTTCTTTGGTTGTGTA+GGG + Chr5:29944398-29944417 MsG0580026059.01.T01:intron 35.0%
TTGTACTAAACAGTGTATCG+CGG + Chr5:29947657-29947676 MsG0580026059.01.T01:intron 35.0%
TTGTCAAATAGCAGCTATAG+CGG - Chr5:29947633-29947652 None:intergenic 35.0%
! CTGAAAAGGCACAAGTTAAA+AGG + Chr5:29949422-29949441 MsG0580026059.01.T01:CDS 35.0%
! GAGGTGTATGCATTTTCTTT+TGG + Chr5:29945429-29945448 MsG0580026059.01.T01:intron 35.0%
! GTAACAATGCCGATAGATTT+TGG - Chr5:29948537-29948556 None:intergenic 35.0%
! GTTATCAGCTTTTCTACTCT+TGG - Chr5:29950768-29950787 None:intergenic 35.0%
! TATCAGCTTTTCTACTCTTG+GGG - Chr5:29950766-29950785 None:intergenic 35.0%
! TCTTTTCATTCCTTCACCAT+TGG + Chr5:29946400-29946419 MsG0580026059.01.T01:intron 35.0%
! TTGTTTGGAACATGTTCCTT+AGG + Chr5:29945258-29945277 MsG0580026059.01.T01:intron 35.0%
! TTTTCTGACAGCTTTTCTTC+CGG - Chr5:29948567-29948586 None:intergenic 35.0%
!! ACGGAGGGAGTATTATTTAT+TGG + Chr5:29946170-29946189 MsG0580026059.01.T01:intron 35.0%
!! CAAAGAGTATCGTATATGGA+TGG - Chr5:29945460-29945479 None:intergenic 35.0%
!! GTTCTAGGAGATTCACATAA+TGG - Chr5:29944570-29944589 None:intergenic 35.0%
!! TCAATTTCACAGCCTTGTTA+AGG + Chr5:29946269-29946288 MsG0580026059.01.T01:intron 35.0%
!!! AGTGTTGGTTATGATTTTGG+GGG + Chr5:29945339-29945358 MsG0580026059.01.T01:intron 35.0%
!!! TGTTGTTTTCATTTGGGTTC+TGG + Chr5:29945400-29945419 MsG0580026059.01.T01:intron 35.0%
AAAAACAGTGACAGAGCATG+TGG - Chr5:29946316-29946335 None:intergenic 40.0%
AAAAGCTTGACCTTGTCCAA+CGG - Chr5:29949357-29949376 None:intergenic 40.0%
AAATGGAGATGAAAAGGCTC+AGG + Chr5:29947411-29947430 MsG0580026059.01.T01:CDS 40.0%
AAGATGATCTTGAGACACTC+AGG + Chr5:29947461-29947480 MsG0580026059.01.T01:CDS 40.0%
AAGCCAAAGAAGAGCTCAAA+TGG + Chr5:29949817-29949836 MsG0580026059.01.T01:CDS 40.0%
AAGCCAAAGAAGAGCTTAAG+TGG + Chr5:29950276-29950295 MsG0580026059.01.T01:CDS 40.0%
AAGCCAAAGAAGAGCTTGAA+TGG + Chr5:29950354-29950373 MsG0580026059.01.T01:CDS 40.0%
AATCAGCAAAAGCTAGGCTA+AGG + Chr5:29950637-29950656 MsG0580026059.01.T01:CDS 40.0%
ACCAAAGAAGAGAACAGTCT+TGG + Chr5:29949922-29949941 MsG0580026059.01.T01:CDS 40.0%
AGAAAATGCCTTTGTTCACC+AGG + Chr5:29948581-29948600 MsG0580026059.01.T01:CDS 40.0%
AGTGAAGCAATACAAGGGTA+TGG - Chr5:29948477-29948496 None:intergenic 40.0%
ATAAAATTGTGTTGGGGTGC+AGG + Chr5:29944466-29944485 MsG0580026059.01.T01:intron 40.0%
ATCAGCAAAAGCTAGGCTAA+GGG + Chr5:29950638-29950657 MsG0580026059.01.T01:CDS 40.0%
ATGATATCCATTTCAGCTGC+TGG + Chr5:29949255-29949274 MsG0580026059.01.T01:intron 40.0%
ATTGGTCAGTTATTACGGGA+CGG - Chr5:29945959-29945978 None:intergenic 40.0%
CACAAGTTAAAAGGACTACC+CGG + Chr5:29949431-29949450 MsG0580026059.01.T01:CDS 40.0%
CCAAAGAAGAGCTTAAATGG+CGG + Chr5:29949898-29949917 MsG0580026059.01.T01:CDS 40.0%
CCAAAGAAGAGCTTAAATGG+TGG + Chr5:29949898-29949917 MsG0580026059.01.T01:CDS 40.0%
CCACCATTTAAGCTCTTCTT+TGG - Chr5:29950132-29950151 None:intergenic 40.0%
CCGGTATAATTGACCTACTT+TGG - Chr5:29946149-29946168 None:intergenic 40.0%
CTAGGAGATTCACATAATGG+TGG - Chr5:29944567-29944586 None:intergenic 40.0%
CTTACAGACTAGTGTGAAGA+AGG + Chr5:29950449-29950468 MsG0580026059.01.T01:CDS 40.0%
CTTGGTTTCTTTGGTTGTGT+AGG + Chr5:29944397-29944416 MsG0580026059.01.T01:intron 40.0%
GAAAGCAGTGCTTTCAGAAA+AGG + Chr5:29947348-29947367 MsG0580026059.01.T01:CDS 40.0%
GAAGAAGAATCCAATGGTGA+AGG - Chr5:29946413-29946432 None:intergenic 40.0%
GAAGAGGAAGAAGAATCCAA+TGG - Chr5:29946419-29946438 None:intergenic 40.0%
GACTCATAGAACATACTCTG+CGG + Chr5:29948423-29948442 MsG0580026059.01.T01:intron 40.0%
GAGAGGGATATTCTCTCAAA+TGG + Chr5:29947394-29947413 MsG0580026059.01.T01:CDS 40.0%
GAGCTTGAATTTCAGCATGT+AGG - Chr5:29944435-29944454 None:intergenic 40.0%
GATACATCCGAATGAGTTCT+AGG - Chr5:29944585-29944604 None:intergenic 40.0%
GCAACATTAGCTCCAGATAT+TGG - Chr5:29947328-29947347 None:intergenic 40.0%
GCTTTACTAGGTGATGCTTT+AGG + Chr5:29944741-29944760 MsG0580026059.01.T01:intron 40.0%
GTCAAAGAAGAGAAAGGTCT+TGG + Chr5:29949844-29949863 MsG0580026059.01.T01:CDS 40.0%
GTCAAGGAAGAGAAAGATCT+TGG + Chr5:29950000-29950019 MsG0580026059.01.T01:CDS 40.0%
GTTACTGATGTTTCAGAGCA+GGG + Chr5:29949688-29949707 MsG0580026059.01.T01:CDS 40.0%
TAACTTCATTGAAGGCTCGT+CGG + Chr5:29948084-29948103 MsG0580026059.01.T01:intron 40.0%
TCCAAGACCTTTCTCTTCTT+TGG - Chr5:29949848-29949867 None:intergenic 40.0%
TCCAAGACTGTTCTCTTCTT+TGG - Chr5:29949926-29949945 None:intergenic 40.0%
TCTTCACTTAACAGCAAGTC+AGG + Chr5:29950732-29950751 MsG0580026059.01.T01:CDS 40.0%
TGATCTTGGAGAACCTTACT+TGG + Chr5:29949315-29949334 MsG0580026059.01.T01:CDS 40.0%
TGTTACTGATGTTTCAGAGC+AGG + Chr5:29949687-29949706 MsG0580026059.01.T01:CDS 40.0%
TTACTGATGTTTCAGAGCAG+GGG + Chr5:29949689-29949708 MsG0580026059.01.T01:CDS 40.0%
TTTCTTTCCCTCTGGTTGTT+TGG + Chr5:29949164-29949183 MsG0580026059.01.T01:intron 40.0%
! ATTTTCTCAGAAGAGGAACC+TGG - Chr5:29949715-29949734 None:intergenic 40.0%
! CTGCCATTTAAGCTCTTCTT+TGG - Chr5:29949901-29949920 None:intergenic 40.0%
! CTTTTACCTTGCGAACTTTC+AGG - Chr5:29948274-29948293 None:intergenic 40.0%
! TCTGAGACCTTTCTCTTCTT+TGG - Chr5:29950385-29950404 None:intergenic 40.0%
! TTGGACAAGGTCAAGCTTTT+GGG + Chr5:29949357-29949376 MsG0580026059.01.T01:CDS 40.0%
!! AGGGGTTTTAGTGTGAGTAA+TGG + Chr5:29945228-29945247 MsG0580026059.01.T01:intron 40.0%
!! ATTTGGGTTCTGGATATACG+AGG + Chr5:29945410-29945429 MsG0580026059.01.T01:intron 40.0%
!! GGTTTTAGTGTGAGTAATGG+AGG + Chr5:29945231-29945250 MsG0580026059.01.T01:intron 40.0%
!!! CCTCCTCTTTTTTTTTCTCC+CGG + Chr5:29948761-29948780 MsG0580026059.01.T01:intron 40.0%
!!! CTAGCTTTTGCTGATTCAGT+CGG - Chr5:29950633-29950652 None:intergenic 40.0%
AAACTTCAGTCTGCTTGCAG+AGG + Chr5:29947502-29947521 MsG0580026059.01.T01:CDS 45.0%
AAATAATACTCCCTCCGTCC+CGG - Chr5:29946168-29946187 None:intergenic 45.0%
AACCTTACTTGGCTTCGAAG+TGG + Chr5:29949326-29949345 MsG0580026059.01.T01:CDS 45.0%
AACTTCATTGAAGGCTCGTC+GGG + Chr5:29948085-29948104 MsG0580026059.01.T01:intron 45.0%
AAGGAAGAAGTCCTGGGAAA+TGG + Chr5:29946960-29946979 MsG0580026059.01.T01:CDS 45.0%
AATGCCTTTGTTCACCAGGT+AGG + Chr5:29948585-29948604 MsG0580026059.01.T01:intron 45.0%
AGAAACTTCGGACTCAGTTG+AGG - Chr5:29948968-29948987 None:intergenic 45.0%
AGATGAAAGTGAATGCCTCC+TGG - Chr5:29950715-29950734 None:intergenic 45.0%
AGCTCTTATTCGTGGTCACT+TGG + Chr5:29948142-29948161 MsG0580026059.01.T01:CDS 45.0%
AGGATATGGCTCAATGTGTG+GGG + Chr5:29945300-29945319 MsG0580026059.01.T01:intron 45.0%
AGTAGTTGTGGAAACCTCGT+AGG + Chr5:29946218-29946237 MsG0580026059.01.T01:intron 45.0%
AGTTCCTACCTGGTGAACAA+AGG - Chr5:29948592-29948611 None:intergenic 45.0%
ATACTCCTAGGATGGTGAGT+TGG + Chr5:29944263-29944282 MsG0580026059.01.T01:CDS 45.0%
ATACTCGTGCTCATACTCCT+AGG + Chr5:29944251-29944270 MsG0580026059.01.T01:CDS 45.0%
CAGACTAGTGTGAAGAAGGT+AGG + Chr5:29950453-29950472 MsG0580026059.01.T01:CDS 45.0%
CCAAAGAAGAGCTCAAATGG+TGG + Chr5:29949820-29949839 MsG0580026059.01.T01:CDS 45.0%
CCAAAGAAGAGCTTAAGTGG+CGG + Chr5:29950279-29950298 MsG0580026059.01.T01:CDS 45.0%
CCAAGAAAGGTAGGTTATGG+TGG + Chr5:29944343-29944362 MsG0580026059.01.T01:CDS 45.0%
CCACCATAACCTACCTTTCT+TGG - Chr5:29944346-29944365 None:intergenic 45.0%
CCACCATTTGAGCTCTTCTT+TGG - Chr5:29949823-29949842 None:intergenic 45.0%
CCGCCATTTAAGCTCTTCTT+TGG - Chr5:29949979-29949998 None:intergenic 45.0%
CCGGGAGAAAAAAAAAGAGG+AGG - Chr5:29948764-29948783 None:intergenic 45.0%
CGACTGAATCAGCAAAAGCT+AGG + Chr5:29950631-29950650 MsG0580026059.01.T01:CDS 45.0%
CGGCATTGTTACATCTACAC+CGG + Chr5:29948545-29948564 MsG0580026059.01.T01:CDS 45.0%
CTAGTCTGTAAGACAGCAGT+AGG - Chr5:29950441-29950460 None:intergenic 45.0%
CTGATAACTTTGAGCGGAAG+AGG + Chr5:29950780-29950799 MsG0580026059.01.T01:CDS 45.0%
CTGCCATTCAAGCTCTTCTT+TGG - Chr5:29950360-29950379 None:intergenic 45.0%
GAGGATATGGCTCAATGTGT+GGG + Chr5:29945299-29945318 MsG0580026059.01.T01:intron 45.0%
GCCAAAGAAGAGAAAGGTCT+TGG + Chr5:29950075-29950094 MsG0580026059.01.T01:CDS 45.0%
GGAGTTAGCGAAGACTTGAA+TGG + Chr5:29950489-29950508 MsG0580026059.01.T01:CDS 45.0%
GGCTTATCGTTGTTCTCTTC+TGG - Chr5:29949958-29949977 None:intergenic 45.0%
GTAGGTCAATTATACCGGGA+CGG + Chr5:29946151-29946170 MsG0580026059.01.T01:intron 45.0%
GTTAGCGAAGACTTGAATGG+CGG + Chr5:29950492-29950511 MsG0580026059.01.T01:CDS 45.0%
TAGCGATAGAGGAAACGCAT+GGG - Chr5:29949290-29949309 None:intergenic 45.0%
TATTGCCAACTCACCATCCT+AGG - Chr5:29944271-29944290 None:intergenic 45.0%
TCAGCAAAAGCTAGGCTAAG+GGG + Chr5:29950639-29950658 MsG0580026059.01.T01:CDS 45.0%
TCAGTCGGAGCCATATAACT+CGG - Chr5:29950618-29950637 None:intergenic 45.0%
TCCAAGACCTTTCTCTGCTT+TGG - Chr5:29950307-29950326 None:intergenic 45.0%
TCGAGTAACAAGGATGCACT+GGG + Chr5:29947241-29947260 MsG0580026059.01.T01:CDS 45.0%
TCTCTGTCATCTTCAAGGGA+CGG + Chr5:29950822-29950841 MsG0580026059.01.T01:CDS 45.0%
TCTGTCCAAGACCTTTCTCA+GGG - Chr5:29949774-29949793 None:intergenic 45.0%
TCTTGAGACACTCAGGCTTA+CGG + Chr5:29947468-29947487 MsG0580026059.01.T01:CDS 45.0%
TGAGGATATGGCTCAATGTG+TGG + Chr5:29945298-29945317 MsG0580026059.01.T01:intron 45.0%
TTAGCGATAGAGGAAACGCA+TGG - Chr5:29949291-29949310 None:intergenic 45.0%
TTCGAGTAACAAGGATGCAC+TGG + Chr5:29947240-29947259 MsG0580026059.01.T01:CDS 45.0%
TTCTGTCCAAGACCTTTCTC+AGG - Chr5:29949775-29949794 None:intergenic 45.0%
! AAGCCAAAGAAGAGCGTAAG+TGG + Chr5:29950048-29950067 MsG0580026059.01.T01:CDS 45.0%
! AGGATGGTGAGTTGGCAATA+TGG + Chr5:29944271-29944290 MsG0580026059.01.T01:CDS 45.0%
! ATTGTTGACGTGATGGGGAA+AGG + Chr5:29946941-29946960 MsG0580026059.01.T01:CDS 45.0%
! CGCGTTGACAAATCCAAGAA+AGG + Chr5:29944330-29944349 MsG0580026059.01.T01:CDS 45.0%
! GATGGTGAGTTGGCAATATG+GGG + Chr5:29944273-29944292 MsG0580026059.01.T01:CDS 45.0%
! GGATGGTGAGTTGGCAATAT+GGG + Chr5:29944272-29944291 MsG0580026059.01.T01:CDS 45.0%
! GGTGGTGTCAAAGAAGAGAA+AGG + Chr5:29949838-29949857 MsG0580026059.01.T01:CDS 45.0%
! GTTGGACAAGGTCAAGCTTT+TGG + Chr5:29949356-29949375 MsG0580026059.01.T01:CDS 45.0%
!! CACTCTCGACTCGACTTTTA+GGG + Chr5:29948831-29948850 MsG0580026059.01.T01:intron 45.0%
!! CAGAAAGCACTAGAACAGGA+AGG + Chr5:29950405-29950424 MsG0580026059.01.T01:CDS 45.0%
!! CAGACAGAAAGCACTAGAAC+AGG + Chr5:29950401-29950420 MsG0580026059.01.T01:CDS 45.0%
!! GAAGAAACTTGACTCGGTGT+CGG + Chr5:29949399-29949418 MsG0580026059.01.T01:CDS 45.0%
!! TCACTCATTGGTTTCAGCTC+AGG + Chr5:29949534-29949553 MsG0580026059.01.T01:CDS 45.0%
!! TCACTCTCGACTCGACTTTT+AGG + Chr5:29948830-29948849 MsG0580026059.01.T01:intron 45.0%
!! TCCAAGAGTGCCGAGTTATA+TGG + Chr5:29950605-29950624 MsG0580026059.01.T01:CDS 45.0%
!! CTATAAAAAAATAATAATTT+AGG + Chr5:29945907-29945926 MsG0580026059.01.T01:intron 5.0%
!!! TATTATATTAATTTTATTTC+CGG + Chr5:29944845-29944864 MsG0580026059.01.T01:intron 5.0%
AAAGCTAGGCTAAGGGGACA+AGG + Chr5:29950645-29950664 MsG0580026059.01.T01:CDS 50.0%
AACTCGGCACTCTTGGACTT+GGG - Chr5:29950602-29950621 None:intergenic 50.0%
AAGCTCCTGATCCATTTCCC+AGG - Chr5:29946974-29946993 None:intergenic 50.0%
ACGTTCTGATACTGGGCTTG+AGG + Chr5:29948247-29948266 MsG0580026059.01.T01:CDS 50.0%
AGATGAAAAGGCTCAGGCAC+CGG + Chr5:29947417-29947436 MsG0580026059.01.T01:CDS 50.0%
AGCAGCGATTGTTGACGTGA+TGG + Chr5:29946934-29946953 MsG0580026059.01.T01:intron 50.0%
AGCCACTTCGAAGCCAAGTA+AGG - Chr5:29949331-29949350 None:intergenic 50.0%
AGTTGTGGAAACCTCGTAGG+AGG + Chr5:29946221-29946240 MsG0580026059.01.T01:intron 50.0%
ATCAGGAGCTTACTCTCAGG+GGG + Chr5:29946983-29947002 MsG0580026059.01.T01:CDS 50.0%
ATGGGGAAAGGAAGAAGTCC+TGG + Chr5:29946953-29946972 MsG0580026059.01.T01:CDS 50.0%
CAGCGATTGTTGACGTGATG+GGG + Chr5:29946936-29946955 MsG0580026059.01.T01:intron 50.0%
CAGCTGCAAGCTCTTATTCG+TGG + Chr5:29948134-29948153 MsG0580026059.01.T01:CDS 50.0%
CAGGCAGTGAAGCTCTTCTT+TGG - Chr5:29950542-29950561 None:intergenic 50.0%
CCGCCACTTAAGCTCTTCTT+TGG - Chr5:29950282-29950301 None:intergenic 50.0%
CTCTGTCATCTTCAAGGGAC+GGG + Chr5:29950823-29950842 MsG0580026059.01.T01:CDS 50.0%
CTTTCACGGCAGGTGATTTC+CGG - Chr5:29949453-29949472 None:intergenic 50.0%
GAAGAGTCTTGCCCTGAGAA+AGG + Chr5:29949760-29949779 MsG0580026059.01.T01:CDS 50.0%
GAAGTCCTGGGAAATGGATC+AGG + Chr5:29946966-29946985 MsG0580026059.01.T01:CDS 50.0%
GAGTTCAGCTGTGGGAAGAA+AGG + Chr5:29945123-29945142 MsG0580026059.01.T01:intron 50.0%
GAGTTGGCAATATGGGGATG+AGG + Chr5:29944279-29944298 MsG0580026059.01.T01:CDS 50.0%
GATCAGGAGCTTACTCTCAG+GGG + Chr5:29946982-29947001 MsG0580026059.01.T01:CDS 50.0%
GATGAAGCCAGCAGCTGAAA+TGG - Chr5:29949265-29949284 None:intergenic 50.0%
GATGCAACATTAGCAACGGC+CGG - Chr5:29947439-29947458 None:intergenic 50.0%
GCAGCGATTGTTGACGTGAT+GGG + Chr5:29946935-29946954 MsG0580026059.01.T01:intron 50.0%
GCCAAAGCAGAGAAAGGTCT+TGG + Chr5:29950303-29950322 MsG0580026059.01.T01:CDS 50.0%
GCCATATAACTCGGCACTCT+TGG - Chr5:29950609-29950628 None:intergenic 50.0%
GGATATGGCTCAATGTGTGG+GGG + Chr5:29945301-29945320 MsG0580026059.01.T01:intron 50.0%
GGATCAGGAGCTTACTCTCA+GGG + Chr5:29946981-29947000 MsG0580026059.01.T01:CDS 50.0%
GGCAGTGCCAAAGAAGAGAA+AGG + Chr5:29950375-29950394 MsG0580026059.01.T01:CDS 50.0%
GGGCAAGACTCTTCTGACTT+TGG - Chr5:29949754-29949773 None:intergenic 50.0%
GTCAATTATACCGGGACGGA+GGG + Chr5:29946155-29946174 MsG0580026059.01.T01:intron 50.0%
GTCAGTTATTACGGGACGGA+GGG - Chr5:29945955-29945974 None:intergenic 50.0%
GTCATAGATTCCCTCCTACG+AGG - Chr5:29946235-29946254 None:intergenic 50.0%
GTTGTGGAAACCTCGTAGGA+GGG + Chr5:29946222-29946241 MsG0580026059.01.T01:intron 50.0%
TAACTCGGCACTCTTGGACT+TGG - Chr5:29950603-29950622 None:intergenic 50.0%
TAGAACATACTCTGCGGCGT+AGG + Chr5:29948429-29948448 MsG0580026059.01.T01:intron 50.0%
TCGTGCTCATACTCCTAGGA+TGG + Chr5:29944255-29944274 MsG0580026059.01.T01:CDS 50.0%
TCTTGCCCTGAGAAAGGTCT+TGG + Chr5:29949766-29949785 MsG0580026059.01.T01:CDS 50.0%
TGAGCCCTCATCAGCTTTCA+CGG - Chr5:29949467-29949486 None:intergenic 50.0%
TGAGGTCCTGAAAGTTCGCA+AGG + Chr5:29948265-29948284 MsG0580026059.01.T01:CDS 50.0%
TGGATCAGGAGCTTACTCTC+AGG + Chr5:29946980-29946999 MsG0580026059.01.T01:CDS 50.0%
TGGGGAAAGGAAGAAGTCCT+GGG + Chr5:29946954-29946973 MsG0580026059.01.T01:CDS 50.0%
TTTCACGGCAGGTGATTTCC+GGG - Chr5:29949452-29949471 None:intergenic 50.0%
! CCAAAGAAGAGCGTAAGTGG+CGG + Chr5:29950051-29950070 MsG0580026059.01.T01:CDS 50.0%
! GAGCTTAAATGGCGGTGTCA+AGG + Chr5:29949984-29950003 MsG0580026059.01.T01:CDS 50.0%
! TATGCGGGCTGATATGCTTC+TGG + Chr5:29947563-29947582 MsG0580026059.01.T01:intron 50.0%
!! AAAGTGCAAGCATTGGCTCG+TGG + Chr5:29948212-29948231 MsG0580026059.01.T01:CDS 50.0%
!! AGGGGTTTTGGTCCGTTTGA+TGG + Chr5:29945195-29945214 MsG0580026059.01.T01:intron 50.0%
ACCTGCCGTGAAAGCTGATG+AGG + Chr5:29949459-29949478 MsG0580026059.01.T01:CDS 55.0%
ACTCGGCACTCTTGGACTTG+GGG - Chr5:29950601-29950620 None:intergenic 55.0%
AGTGGCTTGACCGTTGGACA+AGG + Chr5:29949344-29949363 MsG0580026059.01.T01:CDS 55.0%
CCGCCACTTACGCTCTTCTT+TGG - Chr5:29950054-29950073 None:intergenic 55.0%
CCTGCCGTGAAAGCTGATGA+GGG + Chr5:29949460-29949479 MsG0580026059.01.T01:CDS 55.0%
CTTCGAAGTGGCTTGACCGT+TGG + Chr5:29949338-29949357 MsG0580026059.01.T01:CDS 55.0%
GCTGATGAGGGCTCAAGTTC+TGG + Chr5:29949472-29949491 MsG0580026059.01.T01:CDS 55.0%
GGTCAATTATACCGGGACGG+AGG + Chr5:29946154-29946173 MsG0580026059.01.T01:intron 55.0%
GGTCAGTTATTACGGGACGG+AGG - Chr5:29945956-29945975 None:intergenic 55.0%
GTCTGCTTGCAGAGGCTATC+AGG + Chr5:29947510-29947529 MsG0580026059.01.T01:CDS 55.0%
TCAGGAGCTTACTCTCAGGG+GGG + Chr5:29946984-29947003 MsG0580026059.01.T01:CDS 55.0%
TCATCTTCAAGGGACGGGAC+TGG + Chr5:29950828-29950847 MsG0580026059.01.T01:CDS 55.0%
TGAGCGGAAGAGGAGTTGCA+AGG + Chr5:29950790-29950809 MsG0580026059.01.T01:CDS 55.0%
! GGCGGTGCCAAAGAAGAGAA+AGG + Chr5:29950069-29950088 MsG0580026059.01.T01:CDS 55.0%
!! TGACTCGGTGTCGGCTGAAA+AGG + Chr5:29949408-29949427 MsG0580026059.01.T01:CDS 55.0%
CCCTCATCAGCTTTCACGGC+AGG - Chr5:29949463-29949482 None:intergenic 60.0%
GATGTTTCAGAGCAGGGGCC+AGG + Chr5:29949694-29949713 MsG0580026059.01.T01:CDS 60.0%
! GGCGGTGCCAAAGCAGAGAA+AGG + Chr5:29950297-29950316 MsG0580026059.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr5 gene 29944211 29950863 29944211 ID=MsG0580026059.01;Name=MsG0580026059.01
Chr5 mRNA 29944211 29950863 29944211 ID=MsG0580026059.01.T01;Parent=MsG0580026059.01;Name=MsG0580026059.01.T01;_AED=0.34;_eAED=0.34;_QI=0|0.8|0.5|1|0.8|0.83|6|0|821
Chr5 exon 29944211 29944400 29944211 ID=MsG0580026059.01.T01:exon:33685;Parent=MsG0580026059.01.T01
Chr5 exon 29946939 29947054 29946939 ID=MsG0580026059.01.T01:exon:33686;Parent=MsG0580026059.01.T01
Chr5 exon 29947235 29947531 29947235 ID=MsG0580026059.01.T01:exon:33687;Parent=MsG0580026059.01.T01
Chr5 exon 29948098 29948286 29948098 ID=MsG0580026059.01.T01:exon:33688;Parent=MsG0580026059.01.T01
Chr5 exon 29948522 29948602 29948522 ID=MsG0580026059.01.T01:exon:33689;Parent=MsG0580026059.01.T01
Chr5 exon 29949271 29950863 29949271 ID=MsG0580026059.01.T01:exon:33690;Parent=MsG0580026059.01.T01
Chr5 CDS 29944211 29944400 29944211 ID=MsG0580026059.01.T01:cds;Parent=MsG0580026059.01.T01
Chr5 CDS 29946939 29947054 29946939 ID=MsG0580026059.01.T01:cds;Parent=MsG0580026059.01.T01
Chr5 CDS 29947235 29947531 29947235 ID=MsG0580026059.01.T01:cds;Parent=MsG0580026059.01.T01
Chr5 CDS 29948098 29948286 29948098 ID=MsG0580026059.01.T01:cds;Parent=MsG0580026059.01.T01
Chr5 CDS 29948522 29948602 29948522 ID=MsG0580026059.01.T01:cds;Parent=MsG0580026059.01.T01
Chr5 CDS 29949271 29950863 29949271 ID=MsG0580026059.01.T01:cds;Parent=MsG0580026059.01.T01
Gene Sequence

>MsG0580026059.01.T01

ATGGGGCTTACTCACCAGGCATTTGATACTAACTTCTCGGATACTCGTGCTCATACTCCTAGGATGGTGAGTTGGCAATATGGGGATGAGGACACCATAGTTCTCAATGTTGATAGAAGCGCGTTGACAAATCCAAGAAAGGTAGGTTATGGTGGTCTAATTCGTAAACACGATGAAATTTTTCAACTTGCGATTGTTGACGTGATGGGGAAAGGAAGAAGTCCTGGGAAATGGATCAGGAGCTTACTCTCAGGGGGGAAGAAATCGTCATCGAAGTCTAGTTCGTCGAAGAAGAATGATATTTTTAAATCTTCGAGTAACAAGGATGCACTGGGATCTTCTGAGTTAACTGTGTCTAATCCAATTTCAACTGTGGATTCTTTGCAAATATCTGCACCAATATCTGGAGCTAATGTTGCGAAAGCAGTGCTTTCAGAAAAGGAAGTAGTTAATAAGTCATCACATGAGAGGGATATTCTCTCAAATGGAGATGAAAAGGCTCAGGCACCGGCCGTTGCTAATGTTGCATCTCAAGATGATCTTGAGACACTCAGGCTTACGGAAGCAGCTATTAAACTTCAGTCTGCTTGCAGAGGCTATCAGGCTCGTCGGGAATTTCAAACTCTCAAAGCTATTACACAGCTGCAAGCTCTTATTCGTGGTCACTTGGTTAGAAGACAAGCTGTTTCTGCTTTATATTGTTTGAAGGGAATTGTTAAAGTGCAAGCATTGGCTCGTGGTTACAATGTTAGACGTTCTGATACTGGGCTTGAGGTCCTGAAAGTTCGCAAGGATACTCAATGTCCAAAATCTATCGGCATTGTTACATCTACACCGGAAGAAAAGCTGTCAGAAAATGCCTTTGTTCACCAGCTGCTGGCTTCATCGACCCATGCGTTTCCTCTATCGCTAAATAGTGATCTTGGAGAACCTTACTTGGCTTCGAAGTGGCTTGACCGTTGGACAAGGTCAAGCTTTTGGGCACCTCTTCCAAAATTGAAGAAGAAACTTGACTCGGTGTCGGCTGAAAAGGCACAAGTTAAAAGGACTACCCGGAAATCACCTGCCGTGAAAGCTGATGAGGGCTCAAGTTCTGGTTCTAACAAACAAAAACAACGTCCAAAAAAGGATTCAAATCACTCATTGGTTTCAGCTCAGGCACAAGAACACCCAAAGAAAGAAATTGAGAAAAGTAGTCTAAAGAAAACTCGTCTGCAGAATGTTTCAGACAGATCTGAGATTGTTAATGAGAAAAGAAAACACAGCTCTAGGGCAACTTCAGATCAAACTGTTACTGATGTTTCAGAGCAGGGGCCAGGTTCCTCTTCTGAGAAAATGAAAGAAACGACGGTACCAAAGTCAGAAGAGTCTTGCCCTGAGAAAGGTCTTGGACAGAAAGTACTAGAAGAGAATAATGATAAGCCAAAGAAGAGCTCAAATGGTGGTGTCAAAGAAGAGAAAGGTCTTGGAAAGAAAACACTAGAAGAGATAAACGATAAGCCAAAGAAGAGCTTAAATGGCAGTACCAAAGAAGAGAACAGTCTTGGACTGAAAACACCAGAAGAGAACAACGATAAGCCAAAGAAGAGCTTAAATGGCGGTGTCAAGGAAGAGAAAGATCTTGGACAGAAAACACAAGAAAATAATGATAAGCCAAAGAAGAGCGTAAGTGGCGGTGCCAAAGAAGAGAAAGGTCTTGGACAGAAAGCGCAAGAAGAGAATAATGGTAAGCCAAAGAAGAGCTTAAATGGTGGTTTCAAAGAAGAGAAAGATGTTGGACAGAAAGCACAAGAGAATAATGATAAGCCAAAGAAGAGCTTAAATGGCGGTGTCAAAGAAGAGAAAAATCTTGGACAAAAAACACAAGAGAATAATGATAAGCCAAAGAAGAGCTTAAGTGGCGGTGCCAAAGCAGAGAAAGGTCTTGGACAGAAAGCGCAAGAAGAGAATAATGGTAAGCCAAAGAAGAGCTTGAATGGCAGTGCCAAAGAAGAGAAAGGTCTCAGACAGAAAGCACTAGAACAGGAAGGTCATAATGATCCTACTGCTGTCTTACAGACTAGTGTGAAGAAGGTAGGAGATGAAGAAATAGGAGTTAGCGAAGACTTGAATGGCGGTGACAAAGTTATCAGCAACAATTACCAAAGAAGAGCTTCACTGCCTGCTAATTTTAATGATCAAGAAAATGAGATACACAACACCCCAAGTCCAAGAGTGCCGAGTTATATGGCTCCGACTGAATCAGCAAAAGCTAGGCTAAGGGGACAAGGCTCCCCAAGATTTGCTACTGATATCATAGACAAAAACAGTTTAACCAGGAGGCATTCACTTTCATCTTCACTTAACAGCAAGTCAGGTTCATTTTCCCCAAGAGTAGAAAAGCTGATAACTTTGAGCGGAAGAGGAGTTGCAAGGACTGATAAATCTCTGTCATCTTCAAGGGACGGGACTGGTAAGCATTTATAA

Protein sequence

>MsG0580026059.01.T01

MGLTHQAFDTNFSDTRAHTPRMVSWQYGDEDTIVLNVDRSALTNPRKVGYGGLIRKHDEIFQLAIVDVMGKGRSPGKWIRSLLSGGKKSSSKSSSSKKNDIFKSSSNKDALGSSELTVSNPISTVDSLQISAPISGANVAKAVLSEKEVVNKSSHERDILSNGDEKAQAPAVANVASQDDLETLRLTEAAIKLQSACRGYQARREFQTLKAITQLQALIRGHLVRRQAVSALYCLKGIVKVQALARGYNVRRSDTGLEVLKVRKDTQCPKSIGIVTSTPEEKLSENAFVHQLLASSTHAFPLSLNSDLGEPYLASKWLDRWTRSSFWAPLPKLKKKLDSVSAEKAQVKRTTRKSPAVKADEGSSSGSNKQKQRPKKDSNHSLVSAQAQEHPKKEIEKSSLKKTRLQNVSDRSEIVNEKRKHSSRATSDQTVTDVSEQGPGSSSEKMKETTVPKSEESCPEKGLGQKVLEENNDKPKKSSNGGVKEEKGLGKKTLEEINDKPKKSLNGSTKEENSLGLKTPEENNDKPKKSLNGGVKEEKDLGQKTQENNDKPKKSVSGGAKEEKGLGQKAQEENNGKPKKSLNGGFKEEKDVGQKAQENNDKPKKSLNGGVKEEKNLGQKTQENNDKPKKSLSGGAKAEKGLGQKAQEENNGKPKKSLNGSAKEEKGLRQKALEQEGHNDPTAVLQTSVKKVGDEEIGVSEDLNGGDKVISNNYQRRASLPANFNDQENEIHNTPSPRVPSYMAPTESAKARLRGQGSPRFATDIIDKNSLTRRHSLSSSLNSKSGSFSPRVEKLITLSGRGVARTDKSLSSSRDGTGKHL*