Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006062.01.T01 | XP_013470342.1 | 97.736 | 751 | 12 | 2 | 1 | 749 | 1 | 748 | 0 | 1522 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006062.01.T01 | A0A178VBJ0 | 30.228 | 483 | 288 | 10 | 262 | 730 | 191 | 638 | 8.88E-57 | 208 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006062.01.T01 | A0A072W2C8 | 97.736 | 751 | 12 | 2 | 1 | 749 | 1 | 748 | 0.0 | 1522 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048775.01 | MsG0180006062.01 | 0.806570 | 7.713799e-50 | 4.200993e-47 |
| MsG0080048781.01 | MsG0180006062.01 | 0.808585 | 2.881028e-50 | 1.653602e-47 |
| MsG0180001293.01 | MsG0180006062.01 | 0.823085 | 1.674265e-53 | 1.427412e-50 |
| MsG0180002218.01 | MsG0180006062.01 | 0.808258 | 3.383249e-50 | 1.925444e-47 |
| MsG0180002397.01 | MsG0180006062.01 | 0.829335 | 5.452503e-55 | 5.564463e-52 |
| MsG0180002583.01 | MsG0180006062.01 | 0.804012 | 2.649820e-49 | 1.351402e-46 |
| MsG0180003857.01 | MsG0180006062.01 | 0.819989 | 8.693784e-53 | 6.793949e-50 |
| MsG0180004120.01 | MsG0180006062.01 | 0.848018 | 8.008310e-60 | 1.449729e-56 |
| MsG0180004299.01 | MsG0180006062.01 | 0.802652 | 5.068678e-49 | 2.496373e-46 |
| MsG0180004471.01 | MsG0180006062.01 | 0.828564 | 8.382613e-55 | 8.362679e-52 |
| MsG0180004538.01 | MsG0180006062.01 | 0.822057 | 2.903117e-53 | 2.403488e-50 |
| MsG0180004583.01 | MsG0180006062.01 | 0.824549 | 7.601592e-54 | 6.754992e-51 |
| MsG0180004995.01 | MsG0180006062.01 | 0.812518 | 4.071247e-51 | 2.594121e-48 |
| MsG0180005048.01 | MsG0180006062.01 | 0.853569 | 2.191325e-61 | 4.755669e-58 |
| MsG0180006062.01 | MsG0180006133.01 | 0.861667 | 8.733198e-64 | 2.489775e-60 |
| MsG0180006062.01 | MsG0280007092.01 | 0.803699 | 3.076954e-49 | 1.556645e-46 |
| MsG0180006062.01 | MsG0380012956.01 | 0.800995 | 1.109389e-48 | 5.239576e-46 |
| MsG0180006062.01 | MsG0380014666.01 | 0.851638 | 7.788000e-61 | 1.586466e-57 |
| MsG0180006062.01 | MsG0380015219.01 | 0.804763 | 1.847851e-49 | 9.608206e-47 |
| MsG0180006062.01 | MsG0380015340.01 | 0.827749 | 1.317255e-54 | 1.283199e-51 |
| MsG0180006062.01 | MsG0380015394.01 | 0.809570 | 1.772929e-50 | 1.044624e-47 |
| MsG0180006062.01 | MsG0380016225.01 | 0.834007 | 3.844597e-56 | 4.503854e-53 |
| MsG0180006062.01 | MsG0380017150.01 | 0.809957 | 1.463614e-50 | 8.712292e-48 |
| MsG0180006062.01 | MsG0380017181.01 | 0.844664 | 6.572268e-59 | 1.068585e-55 |
| MsG0180006062.01 | MsG0380017282.01 | 0.832971 | 6.970257e-56 | 7.916012e-53 |
| MsG0180006062.01 | MsG0380017332.01 | 0.838528 | 2.726699e-57 | 3.662124e-54 |
| MsG0180006062.01 | MsG0380017588.01 | 0.812804 | 3.526012e-51 | 2.263395e-48 |
| MsG0180006062.01 | MsG0380017605.01 | 0.813748 | 2.187799e-51 | 1.440751e-48 |
| MsG0180006062.01 | MsG0380017632.01 | 0.803892 | 2.806765e-49 | 1.427093e-46 |
| MsG0180006062.01 | MsG0480018106.01 | 0.843679 | 1.208266e-58 | 1.904883e-55 |
| MsG0180006062.01 | MsG0480018228.01 | 0.812823 | 3.491603e-51 | 2.242495e-48 |
| MsG0180006062.01 | MsG0480018526.01 | 0.803482 | 3.414100e-49 | 1.717628e-46 |
| MsG0180006062.01 | MsG0480018785.01 | 0.804117 | 2.519840e-49 | 1.288581e-46 |
| MsG0180006062.01 | MsG0480020366.01 | 0.832661 | 8.321272e-56 | 9.363307e-53 |
| MsG0180006062.01 | MsG0480020398.01 | 0.821420 | 4.075913e-53 | 3.314388e-50 |
| MsG0180006062.01 | MsG0480020856.01 | 0.816325 | 5.861311e-52 | 4.140646e-49 |
| MsG0180006062.01 | MsG0480021016.01 | 0.800850 | 1.187899e-48 | 5.589360e-46 |
| MsG0180006062.01 | MsG0480021100.01 | 0.804937 | 1.699628e-49 | 8.877536e-47 |
| MsG0180006062.01 | MsG0480021301.01 | 0.848987 | 4.315638e-60 | 8.062662e-57 |
| MsG0180006062.01 | MsG0480021456.01 | 0.807051 | 6.105922e-50 | 3.366805e-47 |
| MsG0180006062.01 | MsG0480021902.01 | 0.837636 | 4.623159e-57 | 6.042741e-54 |
| MsG0180006062.01 | MsG0480022307.01 | 0.830367 | 3.056951e-55 | 3.214220e-52 |
| MsG0180006062.01 | MsG0480022320.01 | 0.845980 | 2.894998e-59 | 4.910072e-56 |
| MsG0180006062.01 | MsG0480022784.01 | 0.841938 | 3.507835e-58 | 5.235303e-55 |
| MsG0180006062.01 | MsG0480023003.01 | 0.831863 | 1.311138e-55 | 1.441056e-52 |
| MsG0180006062.01 | MsG0480023424.01 | 0.839378 | 1.642465e-57 | 2.264191e-54 |
| MsG0180006062.01 | MsG0480023426.01 | 0.833376 | 5.524762e-56 | 6.351102e-53 |
| MsG0180006062.01 | MsG0480023626.01 | 0.813540 | 2.430896e-51 | 1.591908e-48 |
| MsG0180006062.01 | MsG0480023706.01 | 0.846333 | 2.320509e-59 | 3.980223e-56 |
| MsG0180006062.01 | MsG0580024158.01 | 0.800771 | 1.232461e-48 | 5.787141e-46 |
| MsG0180006062.01 | MsG0580024276.01 | 0.832997 | 6.868422e-56 | 7.806672e-53 |
| MsG0180006062.01 | MsG0580024742.01 | 0.800588 | 1.343424e-48 | 6.279221e-46 |
| MsG0180006062.01 | MsG0580024787.01 | 0.814217 | 1.723757e-51 | 1.149674e-48 |
| MsG0180006062.01 | MsG0580024954.01 | 0.837860 | 4.049927e-57 | 5.329934e-54 |
| MsG0180006062.01 | MsG0580025177.01 | 0.846809 | 1.720346e-59 | 2.996809e-56 |
| MsG0180006062.01 | MsG0580025186.01 | 0.823812 | 1.132122e-53 | 9.852436e-51 |
| MsG0180006062.01 | MsG0580025203.01 | 0.844070 | 9.489943e-59 | 1.514574e-55 |
| MsG0180006062.01 | MsG0580025504.01 | 0.834251 | 3.338366e-56 | 3.939743e-53 |
| MsG0180006062.01 | MsG0580025506.01 | 0.832184 | 1.092623e-55 | 1.212046e-52 |
| MsG0180006062.01 | MsG0580028927.01 | 0.832185 | 1.091707e-55 | 1.211080e-52 |
| MsG0180006062.01 | MsG0580028955.01 | 0.853196 | 2.804053e-61 | 6.009666e-58 |
| MsG0180006062.01 | MsG0580029591.01 | 0.837969 | 3.798861e-57 | 5.016239e-54 |
| MsG0180006062.01 | MsG0680035776.01 | 0.843592 | 1.274522e-58 | 2.003976e-55 |
| MsG0180006062.01 | MsG0680035792.01 | 0.867371 | 1.437798e-65 | 5.008556e-62 |
| MsG0180006062.01 | MsG0780036534.01 | 0.820403 | 6.985198e-53 | 5.521990e-50 |
| MsG0180006062.01 | MsG0780038736.01 | 0.823315 | 1.480026e-53 | 1.269894e-50 |
| MsG0180006062.01 | MsG0780039578.01 | 0.827890 | 1.218428e-54 | 1.191859e-51 |
| MsG0180006062.01 | MsG0780039861.01 | 0.812848 | 3.447694e-51 | 2.215780e-48 |
| MsG0180006062.01 | MsG0780040364.01 | 0.827769 | 1.302847e-54 | 1.269875e-51 |
| MsG0180006062.01 | MsG0780040620.01 | 0.842827 | 2.038858e-58 | 3.128978e-55 |
| MsG0180006062.01 | MsG0780040641.01 | 0.842987 | 1.847734e-58 | 2.849761e-55 |
| MsG0180006062.01 | MsG0780040899.01 | 0.805101 | 1.570435e-49 | 8.236831e-47 |
| MsG0180006062.01 | MsG0780041273.01 | 0.835117 | 2.022107e-56 | 2.448862e-53 |
| MsG0180006062.01 | MsG0780041359.01 | 0.830364 | 3.061316e-55 | 3.218542e-52 |
| MsG0180006062.01 | MsG0780041546.01 | 0.806265 | 8.945164e-50 | 4.834063e-47 |
| MsG0180006062.01 | MsG0880042833.01 | 0.810767 | 9.784447e-51 | 5.950137e-48 |
| MsG0180006062.01 | MsG0880045015.01 | 0.809820 | 1.566192e-50 | 9.289325e-48 |
| MsG0180006062.01 | MsG0880045612.01 | 0.831220 | 1.888435e-55 | 2.035997e-52 |
| MsG0180006062.01 | MsG0880045647.01 | 0.815267 | 1.008840e-51 | 6.922911e-49 |
| MsG0180006062.01 | MsG0880045989.01 | 0.814830 | 1.261617e-51 | 8.555254e-49 |
| MsG0180006062.01 | MsG0880046529.01 | 0.804315 | 2.291051e-49 | 1.177535e-46 |
| MsG0180006062.01 | MsG0880046904.01 | 0.828823 | 7.256934e-55 | 7.293955e-52 |
| MsG0180006062.01 | MsG0880046905.01 | 0.851962 | 6.303870e-61 | 1.297183e-57 |
| MsG0180006062.01 | MsG0880047649.01 | 0.829893 | 3.989998e-55 | 4.138470e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006062.01.T01 | MTR_1g112850 | 97.736 | 751 | 12 | 2 | 1 | 749 | 1 | 748 | 0.0 | 1522 |
| MsG0180006062.01.T01 | MTR_8g091250 | 29.911 | 672 | 374 | 19 | 1 | 618 | 1 | 629 | 1.82e-64 | 228 |
| MsG0180006062.01.T01 | MTR_4g127620 | 29.870 | 693 | 369 | 24 | 1 | 607 | 1 | 662 | 1.54e-63 | 226 |
| MsG0180006062.01.T01 | MTR_3g078830 | 31.836 | 512 | 265 | 15 | 173 | 606 | 176 | 681 | 5.38e-60 | 217 |
| MsG0180006062.01.T01 | MTR_5g022530 | 27.778 | 468 | 308 | 7 | 272 | 733 | 204 | 647 | 9.53e-54 | 197 |
| MsG0180006062.01.T01 | MTR_5g087740 | 35.165 | 364 | 202 | 6 | 272 | 608 | 311 | 667 | 2.74e-53 | 197 |
| MsG0180006062.01.T01 | MTR_8g006850 | 26.029 | 753 | 463 | 21 | 1 | 707 | 1 | 705 | 1.47e-49 | 186 |
| MsG0180006062.01.T01 | MTR_3g088190 | 27.802 | 464 | 307 | 8 | 268 | 717 | 450 | 899 | 2.31e-48 | 184 |
| MsG0180006062.01.T01 | MTR_3g109450 | 25.308 | 569 | 391 | 13 | 159 | 721 | 164 | 704 | 1.14e-44 | 171 |
| MsG0180006062.01.T01 | MTR_5g098980 | 28.190 | 525 | 329 | 13 | 173 | 671 | 237 | 739 | 6.53e-43 | 167 |
| MsG0180006062.01.T01 | MTR_2g036920 | 36.525 | 282 | 164 | 4 | 274 | 544 | 505 | 782 | 7.26e-43 | 167 |
| MsG0180006062.01.T01 | MTR_2g036920 | 36.525 | 282 | 164 | 4 | 274 | 544 | 476 | 753 | 7.65e-43 | 167 |
| MsG0180006062.01.T01 | MTR_7g081705 | 27.426 | 474 | 304 | 10 | 246 | 707 | 380 | 825 | 1.03e-42 | 167 |
| MsG0180006062.01.T01 | MTR_2g102050 | 27.074 | 458 | 301 | 10 | 274 | 723 | 322 | 754 | 6.26e-42 | 164 |
| MsG0180006062.01.T01 | MTR_3g096950 | 26.761 | 568 | 362 | 13 | 173 | 717 | 238 | 774 | 1.69e-37 | 150 |
| MsG0180006062.01.T01 | MTR_4g012430 | 26.024 | 415 | 261 | 11 | 273 | 675 | 124 | 504 | 5.05e-33 | 134 |
| MsG0180006062.01.T01 | MTR_2g048360 | 25.561 | 446 | 300 | 7 | 271 | 712 | 207 | 624 | 2.99e-32 | 133 |
| MsG0180006062.01.T01 | MTR_3g115120 | 28.286 | 350 | 213 | 8 | 276 | 615 | 279 | 600 | 4.56e-31 | 130 |
| MsG0180006062.01.T01 | MTR_1g107440 | 49.412 | 85 | 43 | 0 | 364 | 448 | 1 | 85 | 1.17e-17 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180006062.01.T01 | AT4G30130 | 31.657 | 676 | 358 | 23 | 1 | 607 | 1 | 641 | 4.05e-63 | 224 |
| MsG0180006062.01.T01 | AT4G30130 | 31.657 | 676 | 358 | 23 | 1 | 607 | 1 | 641 | 4.05e-63 | 224 |
| MsG0180006062.01.T01 | AT4G39790 | 30.840 | 655 | 337 | 21 | 1 | 600 | 9 | 602 | 3.07e-60 | 215 |
| MsG0180006062.01.T01 | AT1G21740 | 29.921 | 508 | 327 | 7 | 222 | 717 | 451 | 941 | 7.70e-59 | 216 |
| MsG0180006062.01.T01 | AT2G27090 | 27.285 | 722 | 377 | 22 | 1 | 621 | 1 | 675 | 7.26e-58 | 210 |
| MsG0180006062.01.T01 | AT2G27090 | 27.285 | 722 | 377 | 22 | 1 | 621 | 1 | 675 | 7.26e-58 | 210 |
| MsG0180006062.01.T01 | AT3G51290 | 30.228 | 483 | 288 | 10 | 262 | 730 | 191 | 638 | 9.06e-58 | 208 |
| MsG0180006062.01.T01 | AT3G51290 | 29.959 | 484 | 291 | 9 | 271 | 740 | 199 | 648 | 7.22e-57 | 208 |
| MsG0180006062.01.T01 | AT3G51290 | 29.814 | 483 | 284 | 11 | 262 | 730 | 191 | 632 | 4.37e-54 | 197 |
| MsG0180006062.01.T01 | AT1G02110 | 26.471 | 748 | 446 | 18 | 1 | 707 | 1 | 685 | 2.82e-53 | 196 |
| MsG0180006062.01.T01 | AT2G19090 | 35.162 | 401 | 216 | 8 | 274 | 656 | 387 | 761 | 1.78e-52 | 196 |
| MsG0180006062.01.T01 | AT1G77500 | 29.128 | 436 | 285 | 5 | 272 | 707 | 449 | 860 | 2.79e-51 | 193 |
| MsG0180006062.01.T01 | AT4G35240 | 26.667 | 615 | 326 | 18 | 169 | 718 | 274 | 828 | 1.25e-47 | 182 |
| MsG0180006062.01.T01 | AT4G35240 | 26.667 | 615 | 326 | 18 | 169 | 718 | 274 | 828 | 1.25e-47 | 182 |
| MsG0180006062.01.T01 | AT4G35240 | 26.667 | 615 | 326 | 18 | 169 | 718 | 274 | 828 | 1.47e-47 | 181 |
| MsG0180006062.01.T01 | AT4G35240 | 26.667 | 615 | 326 | 18 | 169 | 718 | 274 | 828 | 1.47e-47 | 181 |
| MsG0180006062.01.T01 | AT4G30130 | 32.752 | 516 | 279 | 18 | 1 | 467 | 1 | 497 | 9.16e-45 | 169 |
| MsG0180006062.01.T01 | AT4G30130 | 32.752 | 516 | 279 | 18 | 1 | 467 | 1 | 497 | 9.16e-45 | 169 |
| MsG0180006062.01.T01 | AT3G60320 | 27.536 | 483 | 316 | 7 | 236 | 707 | 319 | 778 | 8.65e-41 | 160 |
| MsG0180006062.01.T01 | AT2G17110 | 30.064 | 469 | 280 | 8 | 169 | 603 | 179 | 633 | 4.25e-40 | 158 |
| MsG0180006062.01.T01 | AT1G52320 | 24.000 | 525 | 344 | 9 | 208 | 722 | 302 | 781 | 5.77e-38 | 152 |
| MsG0180006062.01.T01 | AT1G52320 | 24.000 | 525 | 344 | 9 | 208 | 722 | 302 | 781 | 5.77e-38 | 152 |
| MsG0180006062.01.T01 | AT1G52320 | 24.000 | 525 | 344 | 9 | 208 | 722 | 279 | 758 | 6.52e-38 | 152 |
| MsG0180006062.01.T01 | AT1G52320 | 24.160 | 476 | 320 | 7 | 257 | 722 | 11 | 455 | 4.37e-36 | 142 |
| MsG0180006062.01.T01 | AT1G52320 | 24.160 | 476 | 320 | 7 | 257 | 722 | 11 | 455 | 4.37e-36 | 142 |
| MsG0180006062.01.T01 | AT1G20530 | 25.714 | 630 | 387 | 16 | 1 | 624 | 1 | 555 | 1.45e-33 | 137 |
| MsG0180006062.01.T01 | AT5G54480 | 27.528 | 356 | 217 | 8 | 371 | 721 | 400 | 719 | 1.42e-29 | 125 |
| MsG0180006062.01.T01 | AT2G34670 | 23.236 | 581 | 376 | 15 | 158 | 707 | 123 | 664 | 2.18e-28 | 122 |
| MsG0180006062.01.T01 | AT2G34670 | 23.555 | 467 | 287 | 15 | 158 | 594 | 123 | 549 | 1.53e-17 | 87.4 |
Find 163 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTCACCACAGAGAGATTT+TGG | 0.150155 | 1:+99579125 | MsG0180006062.01.T01:CDS |
| AATGATCTATTTGATGATTA+TGG | 0.221454 | 1:+99580398 | MsG0180006062.01.T01:CDS |
| ACATTGAATGGATTGCAATT+TGG | 0.234471 | 1:+99581668 | MsG0180006062.01.T01:CDS |
| CATTGAATGGATTGCAATTT+GGG | 0.250004 | 1:+99581669 | MsG0180006062.01.T01:CDS |
| TCGAGTAAAATTCAACTTCA+TGG | 0.282119 | 1:-99581232 | None:intergenic |
| TGGTTTCTGATGGTGTTTGC+TGG | 0.291077 | 1:-99578917 | None:intergenic |
| TGTTATTGCATTAATGAGTT+TGG | 0.311748 | 1:-99580288 | None:intergenic |
| CCTTATAACTTTCCCTCCTA+AGG | 0.316405 | 1:+99578833 | MsG0180006062.01.T01:CDS |
| AATTCCCCTTCATTCTAGTT+TGG | 0.322897 | 1:+99579541 | MsG0180006062.01.T01:CDS |
| GAAATTGTTTGAGGAGGTTA+AGG | 0.331317 | 1:+99580478 | MsG0180006062.01.T01:CDS |
| ATATCGAGGACCATTTCATT+AGG | 0.339597 | 1:+99579471 | MsG0180006062.01.T01:CDS |
| TTCATTAGGGCTTATGAGTC+TGG | 0.342761 | 1:+99579485 | MsG0180006062.01.T01:CDS |
| TTGAGAAATAAGAATGTTAG+AGG | 0.343032 | 1:+99580731 | MsG0180006062.01.T01:CDS |
| GTGAGTGTTACCGTCTTATC+AGG | 0.343110 | 1:-99581350 | None:intergenic |
| CCTTAGGAGGGAAAGTTATA+AGG | 0.348068 | 1:-99578833 | None:intergenic |
| GATTATGGAGGAATGGATTC+GGG | 0.351284 | 1:+99580413 | MsG0180006062.01.T01:CDS |
| TGAAAGATGTGAAAGCTCTT+TGG | 0.355631 | 1:+99581387 | MsG0180006062.01.T01:CDS |
| GTTGCTTGTGACTCATGTAT+TGG | 0.370767 | 1:+99578951 | MsG0180006062.01.T01:CDS |
| TTCAATAGTTCAACAATTTG+AGG | 0.371023 | 1:-99580884 | None:intergenic |
| TATCGAGGACCATTTCATTA+GGG | 0.384897 | 1:+99579472 | MsG0180006062.01.T01:CDS |
| TCGTGAAGAAGAATGCTTAA+TGG | 0.386241 | 1:+99581556 | MsG0180006062.01.T01:CDS |
| CTCTGTGGTGAAGGCATTGA+AGG | 0.387609 | 1:-99579116 | None:intergenic |
| TGATTATGGAGGAATGGATT+CGG | 0.388164 | 1:+99580412 | MsG0180006062.01.T01:CDS |
| TCCACTTCCTCCTCTAACTC+TGG | 0.397576 | 1:-99579254 | None:intergenic |
| AGGGCAGTGAGGGAGGAAGA+AGG | 0.402646 | 1:+99579227 | MsG0180006062.01.T01:CDS |
| CCAATGCCATTTCAAGTCAA+TGG | 0.408523 | 1:+99581275 | MsG0180006062.01.T01:CDS |
| GGGCAGTGAGGGAGGAAGAA+GGG | 0.421828 | 1:+99579228 | MsG0180006062.01.T01:CDS |
| GGCGGCCCATTGACTTGAAA+TGG | 0.422222 | 1:-99581281 | None:intergenic |
| TATGAAGGATTCTTCAAGTT+GGG | 0.435429 | 1:+99580364 | MsG0180006062.01.T01:CDS |
| TCCAGAGTTAGAGGAGGAAG+TGG | 0.438913 | 1:+99579253 | MsG0180006062.01.T01:CDS |
| AATGGATAAAAGTGATTACT+TGG | 0.441015 | 1:+99581574 | MsG0180006062.01.T01:CDS |
| TCCCCTTCATTCTAGTTTGG+AGG | 0.441439 | 1:+99579544 | MsG0180006062.01.T01:CDS |
| GTTAGAGGAGGAAGTGGAAA+GGG | 0.441445 | 1:+99579259 | MsG0180006062.01.T01:CDS |
| GGAGAAGGGTCAAGACCCTT+AGG | 0.446422 | 1:-99578849 | None:intergenic |
| AGAAGGGATTCCAGAGTTAG+AGG | 0.450891 | 1:+99579244 | MsG0180006062.01.T01:CDS |
| TCTATTAGCCTCAAGCATCT+TGG | 0.450939 | 1:-99579519 | None:intergenic |
| ATGTGGCTAATGAAAATGTT+GGG | 0.452073 | 1:+99579381 | MsG0180006062.01.T01:CDS |
| AGCAACTCTCTCCCTTCTGC+AGG | 0.453953 | 1:-99579434 | None:intergenic |
| CATGGAAGTCCATGTCATCT+AGG | 0.456422 | 1:+99580309 | MsG0180006062.01.T01:CDS |
| GCAATCATCATGCAAGAGTC+TGG | 0.456649 | 1:+99580331 | MsG0180006062.01.T01:CDS |
| ATCAGAAGACTCTGAGGTTG+TGG | 0.458004 | 1:-99578976 | None:intergenic |
| CAAAGAGAATTCAGAAAATG+AGG | 0.460606 | 1:+99580846 | MsG0180006062.01.T01:CDS |
| AAGAATAATAAAGAAGGTGG+AGG | 0.464612 | 1:+99579320 | MsG0180006062.01.T01:CDS |
| TCTGGCCTCATACTGTCAAA+AGG | 0.466622 | 1:-99579164 | None:intergenic |
| AGTGAAAATAGTGAGAAAGC+TGG | 0.468649 | 1:+99581767 | MsG0180006062.01.T01:CDS |
| TTGCAATCAATCTCGTGGAT+TGG | 0.469345 | 1:+99581094 | MsG0180006062.01.T01:CDS |
| AAGGGTAGAACTTGAGCATA+AGG | 0.470394 | 1:+99579277 | MsG0180006062.01.T01:CDS |
| ACTCATAAGCCCTAATGAAA+TGG | 0.472464 | 1:-99579481 | None:intergenic |
| CTTATAACTTTCCCTCCTAA+GGG | 0.473646 | 1:+99578834 | MsG0180006062.01.T01:CDS |
| TGATTGCAAAATTTATCGTA+CGG | 0.475042 | 1:-99581080 | None:intergenic |
| TTGAAGCCGAGCTTCATCAT+TGG | 0.475679 | 1:+99581129 | MsG0180006062.01.T01:CDS |
| GGAAGTCATTTATTAACCTT+AGG | 0.476815 | 1:+99580434 | MsG0180006062.01.T01:CDS |
| TTTCCTCCAAACTAGAATGA+AGG | 0.477927 | 1:-99579547 | None:intergenic |
| GAGAAAACTTGAGGTAGAGA+AGG | 0.480533 | 1:+99581607 | MsG0180006062.01.T01:CDS |
| CAAATTGTTGAACTATTGAA+AGG | 0.480895 | 1:+99580887 | MsG0180006062.01.T01:CDS |
| CAATGCCATTTCAAGTCAAT+GGG | 0.483470 | 1:+99581276 | MsG0180006062.01.T01:CDS |
| AGATCTGTATGCTGGGATCT+TGG | 0.483601 | 1:+99580796 | MsG0180006062.01.T01:CDS |
| ATTTGATGATTATGGAGGAA+TGG | 0.485602 | 1:+99580406 | MsG0180006062.01.T01:CDS |
| TAGGGCTTATGAGTCTGGTA+AGG | 0.488409 | 1:+99579490 | MsG0180006062.01.T01:CDS |
| GATTTAGATAGAAGATATGA+TGG | 0.488627 | 1:+99581464 | MsG0180006062.01.T01:CDS |
| TGATGCATAGGCATATTCAT+AGG | 0.490912 | 1:-99579077 | None:intergenic |
| GAATTCAGATGATGATTTGA+GGG | 0.492691 | 1:+99579208 | MsG0180006062.01.T01:CDS |
| TGATTTGAGGGCAGTGAGGG+AGG | 0.493471 | 1:+99579220 | MsG0180006062.01.T01:CDS |
| GATATGAAAGATCTGTATGC+TGG | 0.494737 | 1:+99580788 | MsG0180006062.01.T01:CDS |
| GATTGCAAAATTTATCGTAC+GGG | 0.498032 | 1:-99581079 | None:intergenic |
| GAGAAGAATAATAAAGAAGG+TGG | 0.501102 | 1:+99579317 | MsG0180006062.01.T01:CDS |
| ATGGGAAAAGAAATTGTTTG+AGG | 0.502236 | 1:+99580469 | MsG0180006062.01.T01:CDS |
| ACACAGAGGATGACATTGAA+TGG | 0.505166 | 1:+99581656 | MsG0180006062.01.T01:CDS |
| CTATTTGTAGAGAGAGAAAA+CGG | 0.505888 | 1:+99578679 | MsG0180006062.01.T01:CDS |
| GTTATAAGGAAAGGTGAAGA+AGG | 0.506368 | 1:-99578819 | None:intergenic |
| CCAAAATCTCTCTGTGGTGA+AGG | 0.507180 | 1:-99579125 | None:intergenic |
| GATGAAGCTCGGCTTCAAGC+TGG | 0.507445 | 1:-99581124 | None:intergenic |
| TACTCGTAATATGCAACGAT+TGG | 0.509042 | 1:+99581306 | MsG0180006062.01.T01:CDS |
| TTCCTCCAAACTAGAATGAA+GGG | 0.510602 | 1:-99579546 | None:intergenic |
| CCATGCATATAACCTTCCTA+AGG | 0.511382 | 1:-99580450 | None:intergenic |
| AATCATCATCTGAATTCCTA+TGG | 0.513102 | 1:-99579202 | None:intergenic |
| GGAATTCAGATGATGATTTG+AGG | 0.513548 | 1:+99579207 | MsG0180006062.01.T01:CDS |
| CCTTAGGAAGGTTATATGCA+TGG | 0.516989 | 1:+99580450 | MsG0180006062.01.T01:CDS |
| CCATTGACTTGAAATGGCAT+TGG | 0.517887 | 1:-99581275 | None:intergenic |
| GAAGAGAAGAATAATAAAGA+AGG | 0.518314 | 1:+99579314 | MsG0180006062.01.T01:CDS |
| GATGTGGCTAATGAAAATGT+TGG | 0.520032 | 1:+99579380 | MsG0180006062.01.T01:CDS |
| TGGTAGCCATTCATAACCTC+TGG | 0.520711 | 1:-99579182 | None:intergenic |
| CTGGCCTCATACTGTCAAAA+GGG | 0.522430 | 1:-99579163 | None:intergenic |
| CTCAGAGTCTTCTGATGAAG+AGG | 0.525669 | 1:+99578983 | MsG0180006062.01.T01:CDS |
| GTCATTTATTAACCTTAGGA+AGG | 0.527369 | 1:+99580438 | MsG0180006062.01.T01:CDS |
| GATGAAGAGGGAGAGAGAGA+AGG | 0.528990 | 1:+99578996 | MsG0180006062.01.T01:CDS |
| CGCACGCCAATGATGAAGCT+CGG | 0.533254 | 1:-99581135 | None:intergenic |
| ACGTAGAAGCTCTGCATGGA+TGG | 0.535242 | 1:+99581192 | MsG0180006062.01.T01:CDS |
| TGTTGAAACGGCGAAGGCTG+TGG | 0.535339 | 1:+99579358 | MsG0180006062.01.T01:CDS |
| AAATTGTTGAACTATTGAAA+GGG | 0.537939 | 1:+99580888 | MsG0180006062.01.T01:CDS |
| GTGAAAATAGTGAGAAAGCT+GGG | 0.538808 | 1:+99581768 | MsG0180006062.01.T01:CDS |
| ATTTCGTATATAGAAGATGA+TGG | 0.539840 | 1:+99581794 | MsG0180006062.01.T01:CDS |
| TCGTTGCATATTACGAGTAA+TGG | 0.540538 | 1:-99581302 | None:intergenic |
| GGAAAAGAAATTGTTTGAGG+AGG | 0.545354 | 1:+99580472 | MsG0180006062.01.T01:CDS |
| ATATGAAGGATTCTTCAAGT+TGG | 0.546672 | 1:+99580363 | MsG0180006062.01.T01:CDS |
| ACAAGCAACAGATTCATGCT+TGG | 0.548945 | 1:-99578937 | None:intergenic |
| CTTAGGAAGGTTATATGCAT+GGG | 0.550042 | 1:+99580451 | MsG0180006062.01.T01:CDS |
| GATCTATTTGATGATTATGG+AGG | 0.551469 | 1:+99580401 | MsG0180006062.01.T01:CDS |
| TGATGATTTGAGGGCAGTGA+GGG | 0.554612 | 1:+99579217 | MsG0180006062.01.T01:CDS |
| GAGGGAGAGAGAGAAGGTGA+AGG | 0.556743 | 1:+99579002 | MsG0180006062.01.T01:CDS |
| GGTGTTTGCTGGAGAAACAT+AGG | 0.559934 | 1:-99578906 | None:intergenic |
| GGAGGGAAAGTTATAAGGAA+AGG | 0.561620 | 1:-99578828 | None:intergenic |
| GATTCATGCTTGGTTTCTGA+TGG | 0.562846 | 1:-99578927 | None:intergenic |
| GTTGATGAATGAGAAGGAGA+AGG | 0.565677 | 1:-99578864 | None:intergenic |
| TCTGGTGGTTCAAAATATGA+AGG | 0.565683 | 1:+99580349 | MsG0180006062.01.T01:CDS |
| CTTATCAGGCAACTTTCGTA+AGG | 0.566150 | 1:-99581336 | None:intergenic |
| GAAGGATTCTTCAAGTTGGG+TGG | 0.567665 | 1:+99580367 | MsG0180006062.01.T01:CDS |
| GTGTTTGCTGGAGAAACATA+GGG | 0.572296 | 1:-99578905 | None:intergenic |
| AGTTGTGAGTGGTGTTGAAA+CGG | 0.573652 | 1:+99579346 | MsG0180006062.01.T01:CDS |
| GAAGGGTCAAGACCCTTAGG+AGG | 0.573723 | 1:-99578846 | None:intergenic |
| ATATGAAAGATCTGTATGCT+GGG | 0.574932 | 1:+99580789 | MsG0180006062.01.T01:CDS |
| AACGGCGAAGGCTGTGGATG+TGG | 0.577941 | 1:+99579364 | MsG0180006062.01.T01:CDS |
| ATAAAGAGCAGCAACAGAAG+AGG | 0.579662 | 1:+99581420 | MsG0180006062.01.T01:CDS |
| ACGAAAGTTGCCTGATAAGA+CGG | 0.580833 | 1:+99581340 | MsG0180006062.01.T01:CDS |
| ATGAGGCCAGAGGTTATGAA+TGG | 0.581936 | 1:+99579176 | MsG0180006062.01.T01:CDS |
| TCATAGATCAGAAGAAGAGT+CGG | 0.585891 | 1:+99581532 | MsG0180006062.01.T01:CDS |
| AGGTTATGAATGGCTACCAT+AGG | 0.586947 | 1:+99579186 | MsG0180006062.01.T01:CDS |
| ACATGTGAAGTATTTGACTT+CGG | 0.592384 | 1:-99581054 | None:intergenic |
| AAAGAGAATTCAGAAAATGA+GGG | 0.594163 | 1:+99580847 | MsG0180006062.01.T01:CDS |
| AGGAGATGATGAATTAAGCA+TGG | 0.594438 | 1:+99580751 | MsG0180006062.01.T01:CDS |
| ACAATCGTGGAAAATCATGT+TGG | 0.597219 | 1:+99581001 | MsG0180006062.01.T01:CDS |
| TCTAGTTTGGAGGAAATCAA+AGG | 0.598376 | 1:+99579554 | MsG0180006062.01.T01:CDS |
| AGAACTTGAGCATAAGGTGG+TGG | 0.599202 | 1:+99579283 | MsG0180006062.01.T01:CDS |
| GTTCTTGATACACCTGCAGA+AGG | 0.604152 | 1:+99579422 | MsG0180006062.01.T01:CDS |
| GGCATAGACATATGATGCAT+AGG | 0.605861 | 1:-99579089 | None:intergenic |
| TCAGAGTCTTCTGATGAAGA+GGG | 0.607143 | 1:+99578984 | MsG0180006062.01.T01:CDS |
| AGTTAGAGGAGGAAGTGGAA+AGG | 0.607289 | 1:+99579258 | MsG0180006062.01.T01:CDS |
| AACTCATTAATGCAATAACA+TGG | 0.609435 | 1:+99580291 | MsG0180006062.01.T01:CDS |
| AGAATAATAAAGAAGGTGGA+GGG | 0.610927 | 1:+99579321 | MsG0180006062.01.T01:CDS |
| TTGATGAATGAGAAGGAGAA+GGG | 0.611312 | 1:-99578863 | None:intergenic |
| TGATGATTGCCTAGATGACA+TGG | 0.612443 | 1:-99580318 | None:intergenic |
| GGTGAAGGCATTGAAGGTGG+TGG | 0.616383 | 1:-99579110 | None:intergenic |
| GACTTGAAATGGCATTGGCA+TGG | 0.616911 | 1:-99581270 | None:intergenic |
| AGGGCTTATGAGTCTGGTAA+GGG | 0.622828 | 1:+99579491 | MsG0180006062.01.T01:CDS |
| CTCTTCATCAGAAGACTCTG+AGG | 0.623573 | 1:-99578982 | None:intergenic |
| TTCTTGATACACCTGCAGAA+GGG | 0.629508 | 1:+99579423 | MsG0180006062.01.T01:CDS |
| TCCTCCAAACTAGAATGAAG+GGG | 0.630374 | 1:-99579545 | None:intergenic |
| GTGTGTTGCCTCAAAACTAG+AGG | 0.637521 | 1:+99578638 | MsG0180006062.01.T01:CDS |
| TGAAGCTTTGAAAGATATCG+AGG | 0.638509 | 1:+99579457 | MsG0180006062.01.T01:CDS |
| TGTGGTGAAGGCATTGAAGG+TGG | 0.638795 | 1:-99579113 | None:intergenic |
| TGCATGTAGAAATACTCACT+TGG | 0.642692 | 1:-99579050 | None:intergenic |
| GACACTGAGGAGAAAACTTG+AGG | 0.643003 | 1:+99581598 | MsG0180006062.01.T01:CDS |
| AGGGATTCCAGAGTTAGAGG+AGG | 0.644039 | 1:+99579247 | MsG0180006062.01.T01:CDS |
| TGTGGCTAATGAAAATGTTG+GGG | 0.649399 | 1:+99579382 | MsG0180006062.01.T01:CDS |
| ATTGCAAAATTTATCGTACG+GGG | 0.653024 | 1:-99581078 | None:intergenic |
| ATGATGATTTGAGGGCAGTG+AGG | 0.653507 | 1:+99579216 | MsG0180006062.01.T01:CDS |
| GCATACGTAGAAGCTCTGCA+TGG | 0.662202 | 1:+99581188 | MsG0180006062.01.T01:CDS |
| ATCATCATGCAAGAGTCTGG+TGG | 0.664887 | 1:+99580334 | MsG0180006062.01.T01:CDS |
| AATGCAGCTTAACACAATCG+TGG | 0.665288 | 1:+99580988 | MsG0180006062.01.T01:intron |
| GGGTGTGACCAAGATGCTTG+AGG | 0.666909 | 1:+99579511 | MsG0180006062.01.T01:CDS |
| AAGGGTCAAGACCCTTAGGA+GGG | 0.667943 | 1:-99578845 | None:intergenic |
| AGAAGATGATGGTTGCAATG+TGG | 0.668034 | 1:+99581805 | MsG0180006062.01.T01:CDS |
| GAGTGGTGTTGAAACGGCGA+AGG | 0.672115 | 1:+99579352 | MsG0180006062.01.T01:CDS |
| GGTGGAGGGAAAGTTGTGAG+TGG | 0.676621 | 1:+99579335 | MsG0180006062.01.T01:CDS |
| TTGCATATTACGAGTAATGG+CGG | 0.677646 | 1:-99581299 | None:intergenic |
| TCCCAACCAAAATCTCTCTG+TGG | 0.682232 | 1:-99579131 | None:intergenic |
| GGTAGAACTTGAGCATAAGG+TGG | 0.683792 | 1:+99579280 | MsG0180006062.01.T01:CDS |
| CTTAGGCTGGAGATAGCACG+CGG | 0.690858 | 1:+99580681 | MsG0180006062.01.T01:intron |
| TTGCAAAATTTATCGTACGG+GGG | 0.706211 | 1:-99581077 | None:intergenic |
| GTGGCTAATGAAAATGTTGG+GGG | 0.711834 | 1:+99579383 | MsG0180006062.01.T01:CDS |
| GTGATTACTTGGAGACACTG+AGG | 0.718942 | 1:+99581585 | MsG0180006062.01.T01:CDS |
| TGGCTAATGAAAATGTTGGG+GGG | 0.721992 | 1:+99579384 | MsG0180006062.01.T01:CDS |
| GTTGCATGCAAGAAACACAG+AGG | 0.798241 | 1:+99581642 | MsG0180006062.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAGAAATTCATTCTAAA+AGG | + | Chr1:99580918-99580937 | MsG0180006062.01.T01:intron | 15.0% |
| !! | AAATTGTTGAACTATTGAAA+GGG | + | Chr1:99580888-99580907 | MsG0180006062.01.T01:CDS | 20.0% |
| !! | TGATTTAATTGTAGTGAATA+AGG | + | Chr1:99579976-99579995 | MsG0180006062.01.T01:intron | 20.0% |
| !!! | AATGATCTATTTGATGATTA+TGG | + | Chr1:99580398-99580417 | MsG0180006062.01.T01:CDS | 20.0% |
| ! | AAAGAGAATTCAGAAAATGA+GGG | + | Chr1:99580847-99580866 | MsG0180006062.01.T01:CDS | 25.0% |
| ! | AACTCATTAATGCAATAACA+TGG | + | Chr1:99580291-99580310 | MsG0180006062.01.T01:CDS | 25.0% |
| ! | AATAAGTAATCATCATACCA+TGG | - | Chr1:99579645-99579664 | None:intergenic | 25.0% |
| ! | AATGGATAAAAGTGATTACT+TGG | + | Chr1:99581574-99581593 | MsG0180006062.01.T01:CDS | 25.0% |
| ! | AATGTTAGCAATATATGTCA+AGG | - | Chr1:99580646-99580665 | None:intergenic | 25.0% |
| ! | ATTTCGTATATAGAAGATGA+TGG | + | Chr1:99581794-99581813 | MsG0180006062.01.T01:CDS | 25.0% |
| ! | CAAATTGTTGAACTATTGAA+AGG | + | Chr1:99580887-99580906 | MsG0180006062.01.T01:CDS | 25.0% |
| ! | CAACATACTCAACTATTATT+AGG | - | Chr1:99579585-99579604 | None:intergenic | 25.0% |
| ! | GAAGAGAAGAATAATAAAGA+AGG | + | Chr1:99579314-99579333 | MsG0180006062.01.T01:CDS | 25.0% |
| ! | GATTTAGATAGAAGATATGA+TGG | + | Chr1:99581464-99581483 | MsG0180006062.01.T01:CDS | 25.0% |
| ! | TAGATTAAAACTCCTTAATC+TGG | - | Chr1:99580129-99580148 | None:intergenic | 25.0% |
| ! | TGATTGCAAAATTTATCGTA+CGG | - | Chr1:99581083-99581102 | None:intergenic | 25.0% |
| ! | TGTTATTGCATTAATGAGTT+TGG | - | Chr1:99580291-99580310 | None:intergenic | 25.0% |
| ! | TTCAATAGTTCAACAATTTG+AGG | - | Chr1:99580887-99580906 | None:intergenic | 25.0% |
| ! | TTCACTACAATTAAATCAAC+AGG | - | Chr1:99579974-99579993 | None:intergenic | 25.0% |
| ! | TTCGTCATAAACAGAAAATA+TGG | - | Chr1:99580537-99580556 | None:intergenic | 25.0% |
| ! | TTGAGAAATAAGAATGTTAG+AGG | + | Chr1:99580731-99580750 | MsG0180006062.01.T01:CDS | 25.0% |
| !! | AACTTTTAATCATGGATACA+TGG | - | Chr1:99580236-99580255 | None:intergenic | 25.0% |
| !! | AAGTTGAATTAGCTTATGTA+AGG | + | Chr1:99579791-99579810 | MsG0180006062.01.T01:intron | 25.0% |
| !! | AGTTGAATTAGCTTATGTAA+GGG | + | Chr1:99579792-99579811 | MsG0180006062.01.T01:intron | 25.0% |
| !! | ATGGTTCAAACTTTTAATCA+TGG | - | Chr1:99580244-99580263 | None:intergenic | 25.0% |
| !! | ATTTGGTTCATGTAATATGT+AGG | + | Chr1:99579764-99579783 | MsG0180006062.01.T01:intron | 25.0% |
| AAGAATAATAAAGAAGGTGG+AGG | + | Chr1:99579320-99579339 | MsG0180006062.01.T01:CDS | 30.0% | |
| AATCATCATCTGAATTCCTA+TGG | - | Chr1:99579205-99579224 | None:intergenic | 30.0% | |
| AGAACAAAACAACAATGTGT+TGG | + | Chr1:99580589-99580608 | MsG0180006062.01.T01:intron | 30.0% | |
| AGAATAATAAAGAAGGTGGA+GGG | + | Chr1:99579321-99579340 | MsG0180006062.01.T01:CDS | 30.0% | |
| ATATGAAAGATCTGTATGCT+GGG | + | Chr1:99580789-99580808 | MsG0180006062.01.T01:CDS | 30.0% | |
| ATATGAAGGATTCTTCAAGT+TGG | + | Chr1:99580363-99580382 | MsG0180006062.01.T01:CDS | 30.0% | |
| ATATGTCAAGGAACAAAACA+AGG | - | Chr1:99580634-99580653 | None:intergenic | 30.0% | |
| ATGGGAAAAGAAATTGTTTG+AGG | + | Chr1:99580469-99580488 | MsG0180006062.01.T01:CDS | 30.0% | |
| ATGTGGCTAATGAAAATGTT+GGG | + | Chr1:99579381-99579400 | MsG0180006062.01.T01:CDS | 30.0% | |
| ATTACCATTTACCAACACAT+TGG | + | Chr1:99579662-99579681 | MsG0180006062.01.T01:intron | 30.0% | |
| ATTGCAAAATTTATCGTACG+GGG | - | Chr1:99581081-99581100 | None:intergenic | 30.0% | |
| ATTTAGTCATATTCCTGCAT+TGG | + | Chr1:99579716-99579735 | MsG0180006062.01.T01:intron | 30.0% | |
| CAAAGAGAATTCAGAAAATG+AGG | + | Chr1:99580846-99580865 | MsG0180006062.01.T01:CDS | 30.0% | |
| CTATTTGTAGAGAGAGAAAA+CGG | + | Chr1:99578679-99578698 | MsG0180006062.01.T01:CDS | 30.0% | |
| GAATTCAGATGATGATTTGA+GGG | + | Chr1:99579208-99579227 | MsG0180006062.01.T01:CDS | 30.0% | |
| GAGAAGAATAATAAAGAAGG+TGG | + | Chr1:99579317-99579336 | MsG0180006062.01.T01:CDS | 30.0% | |
| GATTGCAAAATTTATCGTAC+GGG | - | Chr1:99581082-99581101 | None:intergenic | 30.0% | |
| GGAAGTCATTTATTAACCTT+AGG | + | Chr1:99580434-99580453 | MsG0180006062.01.T01:CDS | 30.0% | |
| GTCATTTATTAACCTTAGGA+AGG | + | Chr1:99580438-99580457 | MsG0180006062.01.T01:CDS | 30.0% | |
| GTTGACACATTTATTGATCA+TGG | + | Chr1:99579836-99579855 | MsG0180006062.01.T01:intron | 30.0% | |
| TAACATGCACTAAATCAACT+CGG | - | Chr1:99579948-99579967 | None:intergenic | 30.0% | |
| TCGAGTAAAATTCAACTTCA+TGG | - | Chr1:99581235-99581254 | None:intergenic | 30.0% | |
| TCTATGCTCTCAAATCAATA+GGG | - | Chr1:99580091-99580110 | None:intergenic | 30.0% | |
| TGTCAGATCTCAAATCAATT+GGG | + | Chr1:99579860-99579879 | MsG0180006062.01.T01:intron | 30.0% | |
| TTTAGTCATATTCCTGCATT+GGG | + | Chr1:99579717-99579736 | MsG0180006062.01.T01:intron | 30.0% | |
| ! | AAATTTTGCAATCAATCTCG+TGG | + | Chr1:99581089-99581108 | MsG0180006062.01.T01:CDS | 30.0% |
| ! | AATGTGTCAACATTTTTGCA+TGG | - | Chr1:99579827-99579846 | None:intergenic | 30.0% |
| ! | ACATGTGAAGTATTTGACTT+CGG | - | Chr1:99581057-99581076 | None:intergenic | 30.0% |
| ! | ATTTGATGATTATGGAGGAA+TGG | + | Chr1:99580406-99580425 | MsG0180006062.01.T01:CDS | 30.0% |
| ! | GATCTATTTGATGATTATGG+AGG | + | Chr1:99580401-99580420 | MsG0180006062.01.T01:CDS | 30.0% |
| ! | TATGAAGGATTCTTCAAGTT+GGG | + | Chr1:99580364-99580383 | MsG0180006062.01.T01:CDS | 30.0% |
| ! | TTCAACTTTTAACATGTCCA+TGG | + | Chr1:99579625-99579644 | MsG0180006062.01.T01:intron | 30.0% |
| !! | ACATTGAATGGATTGCAATT+TGG | + | Chr1:99581668-99581687 | MsG0180006062.01.T01:CDS | 30.0% |
| !! | CATTGAATGGATTGCAATTT+GGG | + | Chr1:99581669-99581688 | MsG0180006062.01.T01:CDS | 30.0% |
| !!! | TTTTCAGTTGATGAATGAGA+AGG | - | Chr1:99578873-99578892 | None:intergenic | 30.0% |
| ACAATCGTGGAAAATCATGT+TGG | + | Chr1:99581001-99581020 | MsG0180006062.01.T01:CDS | 35.0% | |
| ACTAAGATGAACCAATGTGT+TGG | - | Chr1:99579676-99579695 | None:intergenic | 35.0% | |
| ACTCATAAGCCCTAATGAAA+TGG | - | Chr1:99579484-99579503 | None:intergenic | 35.0% | |
| AGACCTGTAGATAGTTGATT+TGG | + | Chr1:99579747-99579766 | MsG0180006062.01.T01:intron | 35.0% | |
| AGGAGATGATGAATTAAGCA+TGG | + | Chr1:99580751-99580770 | MsG0180006062.01.T01:CDS | 35.0% | |
| AGTGAAAATAGTGAGAAAGC+TGG | + | Chr1:99581767-99581786 | MsG0180006062.01.T01:CDS | 35.0% | |
| ATAGGGTCAGCAACTTTAAA+AGG | - | Chr1:99580074-99580093 | None:intergenic | 35.0% | |
| ATATCGAGGACCATTTCATT+AGG | + | Chr1:99579471-99579490 | MsG0180006062.01.T01:CDS | 35.0% | |
| CTGTCAGATCTCAAATCAAT+TGG | + | Chr1:99579859-99579878 | MsG0180006062.01.T01:intron | 35.0% | |
| CTTAGGAAGGTTATATGCAT+GGG | + | Chr1:99580451-99580470 | MsG0180006062.01.T01:CDS | 35.0% | |
| CTTATAACTTTCCCTCCTAA+GGG | + | Chr1:99578834-99578853 | MsG0180006062.01.T01:CDS | 35.0% | |
| GAAAACTGCAACAGCAAAAA+TGG | + | Chr1:99581827-99581846 | MsG0180006062.01.T01:CDS | 35.0% | |
| GAAATTGTTTGAGGAGGTTA+AGG | + | Chr1:99580478-99580497 | MsG0180006062.01.T01:CDS | 35.0% | |
| GAACCAAATCAACTATCTAC+AGG | - | Chr1:99579753-99579772 | None:intergenic | 35.0% | |
| GATATGAAAGATCTGTATGC+TGG | + | Chr1:99580788-99580807 | MsG0180006062.01.T01:CDS | 35.0% | |
| GATGTGGCTAATGAAAATGT+TGG | + | Chr1:99579380-99579399 | MsG0180006062.01.T01:CDS | 35.0% | |
| GCATGACAAAATTGATACTC+TGG | + | Chr1:99580186-99580205 | MsG0180006062.01.T01:intron | 35.0% | |
| GGAAAAGAAATTGTTTGAGG+AGG | + | Chr1:99580472-99580491 | MsG0180006062.01.T01:CDS | 35.0% | |
| GGAATTCAGATGATGATTTG+AGG | + | Chr1:99579207-99579226 | MsG0180006062.01.T01:CDS | 35.0% | |
| GTCTATGCTCTCAAATCAAT+AGG | - | Chr1:99580092-99580111 | None:intergenic | 35.0% | |
| GTGAAAATAGTGAGAAAGCT+GGG | + | Chr1:99581768-99581787 | MsG0180006062.01.T01:CDS | 35.0% | |
| GTTAAGCTGCATTTGGAAAA+TGG | - | Chr1:99580981-99581000 | None:intergenic | 35.0% | |
| GTTATAAGGAAAGGTGAAGA+AGG | - | Chr1:99578822-99578841 | None:intergenic | 35.0% | |
| TACTCGTAATATGCAACGAT+TGG | + | Chr1:99581306-99581325 | MsG0180006062.01.T01:CDS | 35.0% | |
| TATCGAGGACCATTTCATTA+GGG | + | Chr1:99579472-99579491 | MsG0180006062.01.T01:CDS | 35.0% | |
| TCATAGATCAGAAGAAGAGT+CGG | + | Chr1:99581532-99581551 | MsG0180006062.01.T01:CDS | 35.0% | |
| TCGTGAAGAAGAATGCTTAA+TGG | + | Chr1:99581556-99581575 | MsG0180006062.01.T01:CDS | 35.0% | |
| TCGTTGCATATTACGAGTAA+TGG | - | Chr1:99581305-99581324 | None:intergenic | 35.0% | |
| TCTGGTGGTTCAAAATATGA+AGG | + | Chr1:99580349-99580368 | MsG0180006062.01.T01:CDS | 35.0% | |
| TGAAAGATGTGAAAGCTCTT+TGG | + | Chr1:99581387-99581406 | MsG0180006062.01.T01:CDS | 35.0% | |
| TGATGCATAGGCATATTCAT+AGG | - | Chr1:99579080-99579099 | None:intergenic | 35.0% | |
| TGCATGTAGAAATACTCACT+TGG | - | Chr1:99579053-99579072 | None:intergenic | 35.0% | |
| TGTGGCTAATGAAAATGTTG+GGG | + | Chr1:99579382-99579401 | MsG0180006062.01.T01:CDS | 35.0% | |
| TTCCTCCAAACTAGAATGAA+GGG | - | Chr1:99579549-99579568 | None:intergenic | 35.0% | |
| TTGATGAATGAGAAGGAGAA+GGG | - | Chr1:99578866-99578885 | None:intergenic | 35.0% | |
| TTGCAAAATTTATCGTACGG+GGG | - | Chr1:99581080-99581099 | None:intergenic | 35.0% | |
| TTGCATATTACGAGTAATGG+CGG | - | Chr1:99581302-99581321 | None:intergenic | 35.0% | |
| TTTCCTCCAAACTAGAATGA+AGG | - | Chr1:99579550-99579569 | None:intergenic | 35.0% | |
| ! | AATTCCCCTTCATTCTAGTT+TGG | + | Chr1:99579541-99579560 | MsG0180006062.01.T01:CDS | 35.0% |
| ! | AGCAACTTTAAAAGGTTGTG+TGG | - | Chr1:99580066-99580085 | None:intergenic | 35.0% |
| ! | CAATGCCATTTCAAGTCAAT+GGG | + | Chr1:99581276-99581295 | MsG0180006062.01.T01:CDS | 35.0% |
| ! | CTTTCTGCATTGATATCAGA+TGG | - | Chr1:99580263-99580282 | None:intergenic | 35.0% |
| ! | GTACATTTTCTGTGATGCTT+TGG | - | Chr1:99581729-99581748 | None:intergenic | 35.0% |
| ! | TCTAGTTTGGAGGAAATCAA+AGG | + | Chr1:99579554-99579573 | MsG0180006062.01.T01:CDS | 35.0% |
| ! | TGAACCAATGTGTTGGTAAA+TGG | - | Chr1:99579669-99579688 | None:intergenic | 35.0% |
| ! | TGATTATGGAGGAATGGATT+CGG | + | Chr1:99580412-99580431 | MsG0180006062.01.T01:CDS | 35.0% |
| ! | TTTACCCTTTTGACAGTATG+AGG | + | Chr1:99579159-99579178 | MsG0180006062.01.T01:CDS | 35.0% |
| !! | TGAAGCTTTGAAAGATATCG+AGG | + | Chr1:99579457-99579476 | MsG0180006062.01.T01:CDS | 35.0% |
| !!! | TTCTTCTTCCTCTAGTTTTG+AGG | - | Chr1:99578649-99578668 | None:intergenic | 35.0% |
| AAATCAACTCGGCCATCAAT+TGG | - | Chr1:99579937-99579956 | None:intergenic | 40.0% | |
| AAGGGTAGAACTTGAGCATA+AGG | + | Chr1:99579277-99579296 | MsG0180006062.01.T01:CDS | 40.0% | |
| AATGCAGCTTAACACAATCG+TGG | + | Chr1:99580988-99581007 | MsG0180006062.01.T01:intron | 40.0% | |
| ACAAGCAACAGATTCATGCT+TGG | - | Chr1:99578940-99578959 | None:intergenic | 40.0% | |
| ACACAGAGGATGACATTGAA+TGG | + | Chr1:99581656-99581675 | MsG0180006062.01.T01:CDS | 40.0% | |
| ACGAAAGTTGCCTGATAAGA+CGG | + | Chr1:99581340-99581359 | MsG0180006062.01.T01:CDS | 40.0% | |
| AGGTTATGAATGGCTACCAT+AGG | + | Chr1:99579186-99579205 | MsG0180006062.01.T01:CDS | 40.0% | |
| ATAAAGAGCAGCAACAGAAG+AGG | + | Chr1:99581420-99581439 | MsG0180006062.01.T01:CDS | 40.0% | |
| CCATGCATATAACCTTCCTA+AGG | - | Chr1:99580453-99580472 | None:intergenic | 40.0% | |
| CCTTAGGAAGGTTATATGCA+TGG | + | Chr1:99580450-99580469 | MsG0180006062.01.T01:CDS | 40.0% | |
| CCTTAGGAGGGAAAGTTATA+AGG | - | Chr1:99578836-99578855 | None:intergenic | 40.0% | |
| CCTTATAACTTTCCCTCCTA+AGG | + | Chr1:99578833-99578852 | MsG0180006062.01.T01:CDS | 40.0% | |
| CGATTGTGTTAAGCTGCATT+TGG | - | Chr1:99580988-99581007 | None:intergenic | 40.0% | |
| CTTATCAGGCAACTTTCGTA+AGG | - | Chr1:99581339-99581358 | None:intergenic | 40.0% | |
| GAGAAAACTTGAGGTAGAGA+AGG | + | Chr1:99581607-99581626 | MsG0180006062.01.T01:CDS | 40.0% | |
| GATTCATGCTTGGTTTCTGA+TGG | - | Chr1:99578930-99578949 | None:intergenic | 40.0% | |
| GCTGACAAATCTCCAATTGA+TGG | + | Chr1:99579922-99579941 | MsG0180006062.01.T01:intron | 40.0% | |
| GGAGGGAAAGTTATAAGGAA+AGG | - | Chr1:99578831-99578850 | None:intergenic | 40.0% | |
| GGCATAGACATATGATGCAT+AGG | - | Chr1:99579092-99579111 | None:intergenic | 40.0% | |
| GTGGCTAATGAAAATGTTGG+GGG | + | Chr1:99579383-99579402 | MsG0180006062.01.T01:CDS | 40.0% | |
| GTTGCAACTTTGCCAGATTA+AGG | + | Chr1:99580114-99580133 | MsG0180006062.01.T01:intron | 40.0% | |
| GTTGCTTGTGACTCATGTAT+TGG | + | Chr1:99578951-99578970 | MsG0180006062.01.T01:CDS | 40.0% | |
| TCAGAGTCTTCTGATGAAGA+GGG | + | Chr1:99578984-99579003 | MsG0180006062.01.T01:CDS | 40.0% | |
| TCCTCCAAACTAGAATGAAG+GGG | - | Chr1:99579548-99579567 | None:intergenic | 40.0% | |
| TGAATAAGGAACCCTGATGT+AGG | + | Chr1:99579990-99580009 | MsG0180006062.01.T01:intron | 40.0% | |
| TGATGATTGCCTAGATGACA+TGG | - | Chr1:99580321-99580340 | None:intergenic | 40.0% | |
| TGGCTAATGAAAATGTTGGG+GGG | + | Chr1:99579384-99579403 | MsG0180006062.01.T01:CDS | 40.0% | |
| TGTTTGAGGAGGTTAAGGTA+AGG | + | Chr1:99580483-99580502 | MsG0180006062.01.T01:intron | 40.0% | |
| TTCAGTGAATTCCTTGCCTT+AGG | + | Chr1:99580664-99580683 | MsG0180006062.01.T01:intron | 40.0% | |
| TTCATTAGGGCTTATGAGTC+TGG | + | Chr1:99579485-99579504 | MsG0180006062.01.T01:CDS | 40.0% | |
| TTCTTGATACACCTGCAGAA+GGG | + | Chr1:99579423-99579442 | MsG0180006062.01.T01:CDS | 40.0% | |
| TTGCAATCAATCTCGTGGAT+TGG | + | Chr1:99581094-99581113 | MsG0180006062.01.T01:CDS | 40.0% | |
| ! | AGAAGATGATGGTTGCAATG+TGG | + | Chr1:99581805-99581824 | MsG0180006062.01.T01:CDS | 40.0% |
| ! | AGTTGTGAGTGGTGTTGAAA+CGG | + | Chr1:99579346-99579365 | MsG0180006062.01.T01:CDS | 40.0% |
| ! | CCAATGCCATTTCAAGTCAA+TGG | + | Chr1:99581275-99581294 | MsG0180006062.01.T01:CDS | 40.0% |
| ! | GATTATGGAGGAATGGATTC+GGG | + | Chr1:99580413-99580432 | MsG0180006062.01.T01:CDS | 40.0% |
| ! | GTGTTTGCTGGAGAAACATA+GGG | - | Chr1:99578908-99578927 | None:intergenic | 40.0% |
| ! | GTTGATGAATGAGAAGGAGA+AGG | - | Chr1:99578867-99578886 | None:intergenic | 40.0% |
| ! | TCTATTAGCCTCAAGCATCT+TGG | - | Chr1:99579522-99579541 | None:intergenic | 40.0% |
| ! | TTGGTGCTTAACTTCTAGTG+TGG | + | Chr1:99580608-99580627 | MsG0180006062.01.T01:intron | 40.0% |
| !! | CCATTGACTTGAAATGGCAT+TGG | - | Chr1:99581278-99581297 | None:intergenic | 40.0% |
| !! | TACGTATGCTTTTTGAGCTG+CGG | - | Chr1:99581177-99581196 | None:intergenic | 40.0% |
| !!! | ACCACAGAGAGATTTTGGTT+GGG | + | Chr1:99579130-99579149 | MsG0180006062.01.T01:CDS | 40.0% |
| AAAATGTTGGGGGGCAAAAG+GGG | + | Chr1:99579393-99579412 | MsG0180006062.01.T01:CDS | 45.0% | |
| ACCCTGATGTAGGAATGTGA+TGG | + | Chr1:99580000-99580019 | MsG0180006062.01.T01:intron | 45.0% | |
| AGAACTTGAGCATAAGGTGG+TGG | + | Chr1:99579283-99579302 | MsG0180006062.01.T01:CDS | 45.0% | |
| AGAAGGGATTCCAGAGTTAG+AGG | + | Chr1:99579244-99579263 | MsG0180006062.01.T01:CDS | 45.0% | |
| AGATCTGTATGCTGGGATCT+TGG | + | Chr1:99580796-99580815 | MsG0180006062.01.T01:CDS | 45.0% | |
| AGCCATCACATTCCTACATC+AGG | - | Chr1:99580005-99580024 | None:intergenic | 45.0% | |
| AGGGCTTATGAGTCTGGTAA+GGG | + | Chr1:99579491-99579510 | MsG0180006062.01.T01:CDS | 45.0% | |
| AGTTAGAGGAGGAAGTGGAA+AGG | + | Chr1:99579258-99579277 | MsG0180006062.01.T01:CDS | 45.0% | |
| ATCATCATGCAAGAGTCTGG+TGG | + | Chr1:99580334-99580353 | MsG0180006062.01.T01:CDS | 45.0% | |
| ATGAGGCCAGAGGTTATGAA+TGG | + | Chr1:99579176-99579195 | MsG0180006062.01.T01:CDS | 45.0% | |
| ATGATGATTTGAGGGCAGTG+AGG | + | Chr1:99579216-99579235 | MsG0180006062.01.T01:CDS | 45.0% | |
| CATGGAAGTCCATGTCATCT+AGG | + | Chr1:99580309-99580328 | MsG0180006062.01.T01:CDS | 45.0% | |
| CCAAAATCTCTCTGTGGTGA+AGG | - | Chr1:99579128-99579147 | None:intergenic | 45.0% | |
| CTCAGAGTCTTCTGATGAAG+AGG | + | Chr1:99578983-99579002 | MsG0180006062.01.T01:CDS | 45.0% | |
| CTCTTCATCAGAAGACTCTG+AGG | - | Chr1:99578985-99579004 | None:intergenic | 45.0% | |
| CTGGCCTCATACTGTCAAAA+GGG | - | Chr1:99579166-99579185 | None:intergenic | 45.0% | |
| GAAAATGTTGGGGGGCAAAA+GGG | + | Chr1:99579392-99579411 | MsG0180006062.01.T01:CDS | 45.0% | |
| GACACTGAGGAGAAAACTTG+AGG | + | Chr1:99581598-99581617 | MsG0180006062.01.T01:CDS | 45.0% | |
| GAGCATGCACTTGAATAGAC+AGG | + | Chr1:99580164-99580183 | MsG0180006062.01.T01:intron | 45.0% | |
| GATGTAGGAATGTGATGGCT+AGG | + | Chr1:99580005-99580024 | MsG0180006062.01.T01:intron | 45.0% | |
| GCAATCATCATGCAAGAGTC+TGG | + | Chr1:99580331-99580350 | MsG0180006062.01.T01:CDS | 45.0% | |
| GCCATCACATTCCTACATCA+GGG | - | Chr1:99580004-99580023 | None:intergenic | 45.0% | |
| GGTAGAACTTGAGCATAAGG+TGG | + | Chr1:99579280-99579299 | MsG0180006062.01.T01:CDS | 45.0% | |
| GTGAGTGTTACCGTCTTATC+AGG | - | Chr1:99581353-99581372 | None:intergenic | 45.0% | |
| GTGATTACTTGGAGACACTG+AGG | + | Chr1:99581585-99581604 | MsG0180006062.01.T01:CDS | 45.0% | |
| GTGTGTTGCCTCAAAACTAG+AGG | + | Chr1:99578638-99578657 | MsG0180006062.01.T01:CDS | 45.0% | |
| GTTAGAGGAGGAAGTGGAAA+GGG | + | Chr1:99579259-99579278 | MsG0180006062.01.T01:CDS | 45.0% | |
| GTTCTTGATACACCTGCAGA+AGG | + | Chr1:99579422-99579441 | MsG0180006062.01.T01:CDS | 45.0% | |
| GTTGCATGCAAGAAACACAG+AGG | + | Chr1:99581642-99581661 | MsG0180006062.01.T01:CDS | 45.0% | |
| TAGGGCTTATGAGTCTGGTA+AGG | + | Chr1:99579490-99579509 | MsG0180006062.01.T01:CDS | 45.0% | |
| TCCCAACCAAAATCTCTCTG+TGG | - | Chr1:99579134-99579153 | None:intergenic | 45.0% | |
| TCTGGCCTCATACTGTCAAA+AGG | - | Chr1:99579167-99579186 | None:intergenic | 45.0% | |
| TGAAAATGTTGGGGGGCAAA+AGG | + | Chr1:99579391-99579410 | MsG0180006062.01.T01:CDS | 45.0% | |
| TGATGATTTGAGGGCAGTGA+GGG | + | Chr1:99579217-99579236 | MsG0180006062.01.T01:CDS | 45.0% | |
| TGGTAGCCATTCATAACCTC+TGG | - | Chr1:99579185-99579204 | None:intergenic | 45.0% | |
| TTGAAGCCGAGCTTCATCAT+TGG | + | Chr1:99581129-99581148 | MsG0180006062.01.T01:CDS | 45.0% | |
| ! | CCTTCACCACAGAGAGATTT+TGG | + | Chr1:99579125-99579144 | MsG0180006062.01.T01:CDS | 45.0% |
| ! | GGTGTTTGCTGGAGAAACAT+AGG | - | Chr1:99578909-99578928 | None:intergenic | 45.0% |
| ! | TGGTTTCTGATGGTGTTTGC+TGG | - | Chr1:99578920-99578939 | None:intergenic | 45.0% |
| ! | TTTTGACAGTATGAGGCCAG+AGG | + | Chr1:99579166-99579185 | MsG0180006062.01.T01:CDS | 45.0% |
| !! | ATCAGAAGACTCTGAGGTTG+TGG | - | Chr1:99578979-99578998 | None:intergenic | 45.0% |
| !! | CACCACAGAGAGATTTTGGT+TGG | + | Chr1:99579129-99579148 | MsG0180006062.01.T01:CDS | 45.0% |
| !! | GAAGGATTCTTCAAGTTGGG+TGG | + | Chr1:99580367-99580386 | MsG0180006062.01.T01:CDS | 45.0% |
| !! | GACTTGAAATGGCATTGGCA+TGG | - | Chr1:99581273-99581292 | None:intergenic | 45.0% |
| !! | TCCCCTTCATTCTAGTTTGG+AGG | + | Chr1:99579544-99579563 | MsG0180006062.01.T01:CDS | 45.0% |
| AAGGGTCAAGACCCTTAGGA+GGG | - | Chr1:99578848-99578867 | None:intergenic | 50.0% | |
| ACGTAGAAGCTCTGCATGGA+TGG | + | Chr1:99581192-99581211 | MsG0180006062.01.T01:CDS | 50.0% | |
| AGGGATTCCAGAGTTAGAGG+AGG | + | Chr1:99579247-99579266 | MsG0180006062.01.T01:CDS | 50.0% | |
| GATGAAGAGGGAGAGAGAGA+AGG | + | Chr1:99578996-99579015 | MsG0180006062.01.T01:CDS | 50.0% | |
| GCATACGTAGAAGCTCTGCA+TGG | + | Chr1:99581188-99581207 | MsG0180006062.01.T01:CDS | 50.0% | |
| GGTCTTAAGAAGCCCAATGC+AGG | - | Chr1:99579732-99579751 | None:intergenic | 50.0% | |
| GTGAATTCCTTGCCTTAGGC+TGG | + | Chr1:99580668-99580687 | MsG0180006062.01.T01:intron | 50.0% | |
| TCCACTTCCTCCTCTAACTC+TGG | - | Chr1:99579257-99579276 | None:intergenic | 50.0% | |
| TCCAGAGTTAGAGGAGGAAG+TGG | + | Chr1:99579253-99579272 | MsG0180006062.01.T01:CDS | 50.0% | |
| !! | CTCTGTGGTGAAGGCATTGA+AGG | - | Chr1:99579119-99579138 | None:intergenic | 50.0% |
| !! | TGTGGTGAAGGCATTGAAGG+TGG | - | Chr1:99579116-99579135 | None:intergenic | 50.0% |
| AGCAACTCTCTCCCTTCTGC+AGG | - | Chr1:99579437-99579456 | None:intergenic | 55.0% | |
| CGCACGCCAATGATGAAGCT+CGG | - | Chr1:99581138-99581157 | None:intergenic | 55.0% | |
| CTTAGGCTGGAGATAGCACG+CGG | + | Chr1:99580681-99580700 | MsG0180006062.01.T01:intron | 55.0% | |
| GAAGGGTCAAGACCCTTAGG+AGG | - | Chr1:99578849-99578868 | None:intergenic | 55.0% | |
| GAGGGAGAGAGAGAAGGTGA+AGG | + | Chr1:99579002-99579021 | MsG0180006062.01.T01:CDS | 55.0% | |
| GATGAAGCTCGGCTTCAAGC+TGG | - | Chr1:99581127-99581146 | None:intergenic | 55.0% | |
| GCTATCTCCAGCCTAAGGCA+AGG | - | Chr1:99580678-99580697 | None:intergenic | 55.0% | |
| GGAGAAGGGTCAAGACCCTT+AGG | - | Chr1:99578852-99578871 | None:intergenic | 55.0% | |
| GGGTGTGACCAAGATGCTTG+AGG | + | Chr1:99579511-99579530 | MsG0180006062.01.T01:CDS | 55.0% | |
| GGTGGAGGGAAAGTTGTGAG+TGG | + | Chr1:99579335-99579354 | MsG0180006062.01.T01:CDS | 55.0% | |
| TGATTTGAGGGCAGTGAGGG+AGG | + | Chr1:99579220-99579239 | MsG0180006062.01.T01:CDS | 55.0% | |
| TGTTGAAACGGCGAAGGCTG+TGG | + | Chr1:99579358-99579377 | MsG0180006062.01.T01:CDS | 55.0% | |
| ! | GAGTGGTGTTGAAACGGCGA+AGG | + | Chr1:99579352-99579371 | MsG0180006062.01.T01:CDS | 55.0% |
| !! | GGCGGCCCATTGACTTGAAA+TGG | - | Chr1:99581284-99581303 | None:intergenic | 55.0% |
| !! | GGTGAAGGCATTGAAGGTGG+TGG | - | Chr1:99579113-99579132 | None:intergenic | 55.0% |
| AACGGCGAAGGCTGTGGATG+TGG | + | Chr1:99579364-99579383 | MsG0180006062.01.T01:CDS | 60.0% | |
| AGGGCAGTGAGGGAGGAAGA+AGG | + | Chr1:99579227-99579246 | MsG0180006062.01.T01:CDS | 60.0% | |
| CGCGTGCTATCTCCAGCCTA+AGG | - | Chr1:99580683-99580702 | None:intergenic | 60.0% | |
| GGGCAGTGAGGGAGGAAGAA+GGG | + | Chr1:99579228-99579247 | MsG0180006062.01.T01:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 99578633 | 99581856 | 99578633 | ID=MsG0180006062.01;Name=MsG0180006062.01 |
| Chr1 | mRNA | 99578633 | 99581856 | 99578633 | ID=MsG0180006062.01.T01;Parent=MsG0180006062.01;Name=MsG0180006062.01.T01;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|4|0|749 |
| Chr1 | exon | 99578633 | 99579575 | 99578633 | ID=MsG0180006062.01.T01:exon:9671;Parent=MsG0180006062.01.T01 |
| Chr1 | exon | 99580279 | 99580499 | 99580279 | ID=MsG0180006062.01.T01:exon:9672;Parent=MsG0180006062.01.T01 |
| Chr1 | exon | 99580686 | 99580909 | 99580686 | ID=MsG0180006062.01.T01:exon:9673;Parent=MsG0180006062.01.T01 |
| Chr1 | exon | 99580995 | 99581856 | 99580995 | ID=MsG0180006062.01.T01:exon:9674;Parent=MsG0180006062.01.T01 |
| Chr1 | CDS | 99578633 | 99579575 | 99578633 | ID=MsG0180006062.01.T01:cds;Parent=MsG0180006062.01.T01 |
| Chr1 | CDS | 99580279 | 99580499 | 99580279 | ID=MsG0180006062.01.T01:cds;Parent=MsG0180006062.01.T01 |
| Chr1 | CDS | 99580686 | 99580909 | 99580686 | ID=MsG0180006062.01.T01:cds;Parent=MsG0180006062.01.T01 |
| Chr1 | CDS | 99580995 | 99581856 | 99580995 | ID=MsG0180006062.01.T01:cds;Parent=MsG0180006062.01.T01 |
| Gene Sequence |
| Protein sequence |
