AlfalfaGEDB | MsG0380016603.01

M. sativa cultivar ZhongmuNo.1 / MsG0380016603.01

KEGG: -
GO: GO:0003676
PFAM: PF00076 PF07145

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016603.01.T01	XP_003602357.2	97.872	376	5	1	1	373	1	376	0	764

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016603.01.T01	Q9LPI5	70.833	288	78	3	90	373	71	356	6.17E-142	410

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016603.01.T01	G7J8B0	97.872	376	5	1	1	373	1	376	0.0	764

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047869.01	MsG0380016603.01	0.806287	8.850246e-50	4.785286e-47
MsG0080048804.01	MsG0380016603.01	0.800132	1.663646e-48	7.686406e-46
MsG0080048874.01	MsG0380016603.01	0.811479	6.857219e-51	4.249410e-48
MsG0180000503.01	MsG0380016603.01	0.810432	1.156338e-50	6.968815e-48
MsG0180003669.01	MsG0380016603.01	0.814528	1.471324e-51	9.896784e-49
MsG0180003864.01	MsG0380016603.01	0.801400	9.166741e-49	4.373345e-46
MsG0180003948.01	MsG0380016603.01	0.837490	5.041532e-57	6.559488e-54
MsG0180004157.01	MsG0380016603.01	0.829486	5.011447e-55	5.136139e-52
MsG0180004389.01	MsG0380016603.01	0.805404	1.356916e-49	7.172620e-47
MsG0180004462.01	MsG0380016603.01	0.816284	5.985746e-52	4.223829e-49
MsG0180004464.01	MsG0380016603.01	0.807644	4.569625e-50	2.558819e-47
MsG0180005842.01	MsG0380016603.01	0.801284	9.681463e-49	4.605655e-46
MsG0180005954.01	MsG0380016603.01	0.829468	5.061135e-55	5.184414e-52
MsG0280006299.01	MsG0380016603.01	0.805823	1.108125e-49	5.920991e-47
MsG0280006356.01	MsG0380016603.01	0.816405	5.624312e-52	3.981637e-49
MsG0280010614.01	MsG0380016603.01	0.810851	9.384842e-51	5.719982e-48
MsG0280011086.01	MsG0380016603.01	0.808807	2.583217e-50	1.491270e-47
MsG0280011093.01	MsG0380016603.01	0.820536	6.512168e-53	5.166762e-50
MsG0280011446.01	MsG0380016603.01	0.802562	5.288214e-49	2.598562e-46
MsG0380014365.01	MsG0380016603.01	0.812313	4.514108e-51	2.860563e-48
MsG0380014573.01	MsG0380016603.01	0.863359	2.633725e-64	7.962710e-61
MsG0380015564.01	MsG0380016603.01	0.818278	2.130721e-52	1.587816e-49
MsG0380015566.01	MsG0380016603.01	0.826127	3.217091e-54	2.990386e-51
MsG0380015720.01	MsG0380016603.01	0.838346	3.036832e-57	4.055908e-54
MsG0380016244.01	MsG0380016603.01	0.810457	1.141948e-50	6.886663e-48
MsG0380016603.01	MsG0480018861.01	0.825347	4.925583e-54	4.477912e-51
MsG0380016603.01	MsG0480020090.01	0.842981	1.854990e-58	2.860478e-55
MsG0380016603.01	MsG0480022164.01	0.810526	1.103281e-50	6.665747e-48
MsG0380016603.01	MsG0480023088.01	0.801293	9.641316e-49	4.587606e-46
MsG0380016603.01	MsG0480023600.01	0.816226	6.166974e-52	4.344646e-49
MsG0380016603.01	MsG0480023707.01	0.819676	1.024887e-52	7.939161e-50
MsG0380016603.01	MsG0580024035.01	0.815813	7.626167e-52	5.312227e-49
MsG0380016603.01	MsG0580025758.01	0.839385	1.635327e-57	2.254868e-54
MsG0380016603.01	MsG0580026002.01	0.800566	1.357273e-48	6.340266e-46
MsG0380016603.01	MsG0580027031.01	0.813872	2.053782e-51	1.357095e-48
MsG0380016603.01	MsG0580027228.01	0.813113	3.016511e-51	1.952404e-48
MsG0380016603.01	MsG0580029189.01	0.815177	1.056340e-51	7.230602e-49
MsG0380016603.01	MsG0680030529.01	0.800734	1.254330e-48	5.884481e-46
MsG0380016603.01	MsG0680033339.01	0.817837	2.680297e-52	1.973450e-49
MsG0380016603.01	MsG0680035346.01	0.821385	4.152160e-53	3.373048e-50
MsG0380016603.01	MsG0680035694.01	0.827718	1.340373e-54	1.304576e-51
MsG0380016603.01	MsG0680035777.01	0.802992	4.311639e-49	2.141969e-46
MsG0380016603.01	MsG0780037918.01	0.836748	7.802115e-57	9.924654e-54
MsG0380016603.01	MsG0780037942.01	0.839812	1.266455e-57	1.769186e-54
MsG0380016603.01	MsG0780038803.01	0.807942	3.950960e-50	2.229636e-47
MsG0380016603.01	MsG0780039252.01	0.837714	4.416325e-57	5.786113e-54
MsG0380016603.01	MsG0780040162.01	0.821448	4.016035e-53	3.268152e-50
MsG0380016603.01	MsG0780040442.01	0.831543	1.573142e-55	1.712580e-52
MsG0380016603.01	MsG0780041065.01	0.815665	8.227732e-52	5.708155e-49
MsG0380016603.01	MsG0780041134.01	0.829452	5.107710e-55	5.229618e-52
MsG0380016603.01	MsG0780041559.01	0.800976	1.119562e-48	5.284853e-46
MsG0380016603.01	MsG0780041674.01	0.804892	1.736521e-49	9.060193e-47
MsG0380016603.01	MsG0880042158.01	0.805018	1.634469e-49	8.554335e-47
MsG0380016603.01	MsG0880042232.01	0.813529	2.444843e-51	1.600587e-48
MsG0380016603.01	MsG0880042518.01	0.801554	8.525660e-49	4.083391e-46
MsG0380016603.01	MsG0880043144.01	0.824506	7.781074e-54	6.905494e-51
MsG0380016603.01	MsG0880043591.01	0.803997	2.668631e-49	1.360503e-46
MsG0380016603.01	MsG0880044415.01	0.832237	1.060338e-55	1.178010e-52
MsG0380016603.01	MsG0880044416.01	0.803410	3.532670e-49	1.773952e-46
MsG0380016603.01	MsG0880044542.01	0.800839	1.194042e-48	5.616715e-46
MsG0380016603.01	MsG0880045118.01	0.841786	3.847381e-58	5.714387e-55
MsG0380016603.01	MsG0880045691.01	0.803769	2.976135e-49	1.508353e-46
MsG0380016603.01	MsG0880045736.01	0.817967	2.505437e-52	1.851156e-49
MsG0380016603.01	MsG0880046479.01	0.806149	9.461981e-50	5.098066e-47
MsG0380016603.01	MsG0880046669.01	0.814090	1.838672e-51	1.222113e-48
MsG0380016603.01	MsG0880047705.01	0.802439	5.607258e-49	2.746812e-46
MsG0280008073.01	MsG0380016603.01	0.802277	6.056371e-49	2.954568e-46
MsG0280008615.01	MsG0380016603.01	0.821472	3.965827e-53	3.229382e-50
MsG0280008970.01	MsG0380016603.01	0.800347	1.503964e-48	6.986862e-46
MsG0280009024.01	MsG0380016603.01	0.821503	3.899428e-53	3.178023e-50
MsG0280009514.01	MsG0380016603.01	0.804444	2.153827e-49	1.110659e-46
MsG0280010389.01	MsG0380016603.01	0.812768	3.590629e-51	2.302808e-48

PPI

Gene1	Gene2	Type
MsG0380016604.01	MsG0380016603.01	PPI
MsG0380016650.01	MsG0380016603.01	PPI
MsG0380016603.01	MsG0380016650.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016603.01.T01	MTR_3g092510	97.872	376	5	1	1	373	1	376	0.0	764
MsG0380016603.01.T01	MTR_3g092550	77.078	397	52	11	1	373	1	382	0.0	581
MsG0380016603.01.T01	MTR_2g070540	63.534	266	95	1	102	367	28	291	1.60e-118	345

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380016603.01.T01	AT1G32790	70.833	288	78	3	90	373	71	356	6.29e-143	410
MsG0380016603.01.T01	AT4G10610	70.357	280	78	3	93	371	57	332	7.25e-143	409
MsG0380016603.01.T01	AT3G49390	58.082	365	132	7	1	365	1	344	1.07e-140	404
MsG0380016603.01.T01	AT3G49390	46.465	99	47	4	181	278	258	351	4.61e-14	73.2
MsG0380016603.01.T01	AT3G49390	58.082	365	132	7	1	365	1	344	1.07e-140	404
MsG0380016603.01.T01	AT3G49390	46.465	99	47	4	181	278	258	351	4.61e-14	73.2
MsG0380016603.01.T01	AT3G49390	58.082	365	132	7	1	365	1	344	1.07e-140	404
MsG0380016603.01.T01	AT3G49390	46.465	99	47	4	181	278	258	351	4.61e-14	73.2
MsG0380016603.01.T01	AT1G32790	69.963	273	77	2	90	358	71	342	9.93e-134	388
MsG0380016603.01.T01	AT1G32790	40.000	90	50	2	286	372	173	261	6.41e-12	67.0
MsG0380016603.01.T01	AT4G10610	69.811	265	75	3	93	356	57	317	2.79e-133	384
MsG0380016603.01.T01	AT1G53650	60.806	273	91	3	101	373	49	305	7.46e-117	342
MsG0380016603.01.T01	AT3G14450	54.194	310	121	4	70	367	19	319	1.44e-115	339
MsG0380016603.01.T01	AT1G53650	59.498	279	91	4	101	373	49	311	2.25e-110	325
MsG0380016603.01.T01	AT5G24440	48.387	372	134	6	1	369	1	317	3.21e-110	325

Find 125 sgRNAs with CRISPR-Local

Find 291 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CTGACTTGATGAACCGATTT+TGG	0.114098	3:+85599764	None:intergenic
AAGCTGCAGTGGTGTGATTT+TGG	0.171226	3:-85596275	MsG0380016603.01.T01:CDS
CGGTTCATCAAGTCAGAATT+TGG	0.175529	3:-85599757	MsG0380016603.01.T01:CDS
TGAAGCTGTAATTACCATTT+TGG	0.185564	3:+85599628	None:intergenic
TGTTCAGAACCAGCAGTTTA+TGG	0.209925	3:-85599580	MsG0380016603.01.T01:CDS
ACAACCCAAGGACATCAAAT+TGG	0.224436	3:-85600237	MsG0380016603.01.T01:five_prime_UTR
TTAGTCATGAACTGTTTATT+TGG	0.228973	3:-85595786	MsG0380016603.01.T01:three_prime_UTR
TTAAGAAGTATAAAATTGTT+AGG	0.257529	3:+85599366	None:intergenic
TGAAATCCAGCGAACCTTAT+AGG	0.263840	3:+85596244	None:intergenic
ACTAAACGCCACAGGTTCTT+TGG	0.289502	3:+85596015	None:intergenic
GACAGGTGCAATGGCAGTTT+TGG	0.297685	3:+85598360	None:intergenic
TACCTCAAGAGAAGTGATTA+TGG	0.298628	3:-85599808	MsG0380016603.01.T01:exon
GTCCATCGACTGAGGCTTCT+TGG	0.311133	3:-85597782	MsG0380016603.01.T01:CDS
CGTTTAGCTTGTAGAGTTGA+TGG	0.312684	3:-85595928	MsG0380016603.01.T01:three_prime_UTR
TTTGTTTCCCATTGCGGTAA+TGG	0.315893	3:-85595957	MsG0380016603.01.T01:three_prime_UTR
TTAGCTGCTGGACCTGCTGC+TGG	0.319582	3:-85599399	MsG0380016603.01.T01:CDS
TTGTTTCCCATTGCGGTAAT+GGG	0.324018	3:-85595956	MsG0380016603.01.T01:three_prime_UTR
AAAAGTCAGTTCAGCGAAAT+CGG	0.324233	3:-85600191	MsG0380016603.01.T01:five_prime_UTR
TCCATACCCTACGGTTAGTT+TGG	0.330085	3:+85599322	None:intergenic
GGCAAATCGGAGAATAGAAT+TGG	0.332888	3:+85598565	None:intergenic
AACATCCAACCATAAAATTC+TGG	0.333607	3:+85595847	None:intergenic
AGCGAATCATAAAGTGGATA+TGG	0.334771	3:-85599171	MsG0380016603.01.T01:CDS
TTGTTCTCTGTCTTGCACTA+TGG	0.337113	3:-85595984	MsG0380016603.01.T01:three_prime_UTR
GCTGGACCTGCTGCTGGGTT+TGG	0.337646	3:-85599393	MsG0380016603.01.T01:CDS
TCCATCGACTGAGGCTTCTT+GGG	0.338255	3:-85597781	MsG0380016603.01.T01:CDS
TTCATTGAGTTTACAGATGA+AGG	0.345676	3:-85598542	MsG0380016603.01.T01:intron
TAAGCGTGAAATGAGGGATT+TGG	0.349931	3:-85599496	MsG0380016603.01.T01:CDS
TTCAACCATCAACACCAAAA+TGG	0.363787	3:-85599642	MsG0380016603.01.T01:CDS
CGTCCCAATTTGATGTCCTT+GGG	0.376502	3:+85600233	None:intergenic
AGAAAAGAGAAGAGATGATT+AGG	0.382555	3:-85599148	MsG0380016603.01.T01:CDS
AGGACAGTTGATTCAGTTCA+TGG	0.388261	3:+85596095	None:intergenic
GGCTGTAGGTTGTTGATTGT+CGG	0.389761	3:-85598601	MsG0380016603.01.T01:intron
GAATCAACTGTCCTTGCTGC+TGG	0.399371	3:-85596086	MsG0380016603.01.T01:three_prime_UTR
ACGTCCCAATTTGATGTCCT+TGG	0.409430	3:+85600232	None:intergenic
CAGCTTCAAGACTCATCAAA+TGG	0.409609	3:-85599613	MsG0380016603.01.T01:CDS
AAGTCTGTCTGGAACTATGC+TGG	0.410248	3:-85598410	MsG0380016603.01.T01:CDS
CATACTTGAATGGGTAGTTA+TGG	0.425149	3:-85600357	MsG0380016603.01.T01:five_prime_UTR
CAAATTGGGACGTTCTTCTC+AGG	0.425979	3:-85600222	MsG0380016603.01.T01:five_prime_UTR
AATCAACTGTCCTTGCTGCT+GGG	0.435554	3:-85596085	MsG0380016603.01.T01:three_prime_UTR
AAGAATGGCTACACTACTAA+TGG	0.438109	3:-85599203	MsG0380016603.01.T01:CDS
ATCGAAACCGAGGACCGATC+AGG	0.441198	3:-85599685	MsG0380016603.01.T01:CDS
TAAGAAGTATAAAATTGTTA+GGG	0.444999	3:+85599367	None:intergenic
TATTGTGAAGAGAAATGAAA+AGG	0.445580	3:+85600152	None:intergenic
AGGGCTGCTGTAAGTCTGTC+TGG	0.447364	3:-85598421	MsG0380016603.01.T01:CDS
TTCACATCCTGATCGGTCCT+CGG	0.451129	3:+85599678	None:intergenic
CGTGTCTGATATTGATCAGC+TGG	0.452007	3:-85599114	MsG0380016603.01.T01:intron
AAAAGGATGACATACTTGAA+TGG	0.465365	3:-85600367	None:intergenic
GAAAATGTTGGTGCCAAAAT+CGG	0.469626	3:-85599777	MsG0380016603.01.T01:CDS
TAGCTGCTGGACCTGCTGCT+GGG	0.473262	3:-85599398	MsG0380016603.01.T01:CDS
AAAGGATGACATACTTGAAT+GGG	0.476359	3:-85600366	None:intergenic
TTGGAAGGCAGCACTCTCAA+TGG	0.478989	3:+85598379	None:intergenic
TAAACTCAATGAAGGCAAAT+CGG	0.481637	3:+85598552	None:intergenic
CAACCCAAGGACATCAAATT+GGG	0.481848	3:-85600236	MsG0380016603.01.T01:five_prime_UTR
AATCTGATATTAGAGAATAA+AGG	0.482329	3:-85599842	MsG0380016603.01.T01:five_prime_UTR
CTAGGTTACCGAAGAGCAGC+TGG	0.486453	3:-85598986	MsG0380016603.01.T01:intron
GGTATGAGAAATGGTGAGAA+TGG	0.491432	3:-85599531	MsG0380016603.01.T01:CDS
TTCATCTGTAAACTCAATGA+AGG	0.492617	3:+85598544	None:intergenic
TGGAAGGCAGCACTCTCAAT+GGG	0.493363	3:+85598380	None:intergenic
CAGTTTATGGTGAACAATGA+TGG	0.493578	3:-85599567	MsG0380016603.01.T01:CDS
GCTGTAGGTTGTTGATTGTC+GGG	0.497702	3:-85598600	MsG0380016603.01.T01:intron
GAAATGAAAAGGGTGTTGTT+CGG	0.503257	3:+85600163	None:intergenic
GAGAGATGCCAGCTGCTCTT+CGG	0.503624	3:+85598978	None:intergenic
GAAGAACCCATTACCGCAAT+GGG	0.504665	3:+85595950	None:intergenic
GTGATGAATGGTATGAGAAA+TGG	0.508297	3:-85599540	MsG0380016603.01.T01:CDS
GCATCTCTCTTTCTTAATTG+CGG	0.509572	3:-85598964	MsG0380016603.01.T01:CDS
AATAATTATGCTAATGCTAA+CGG	0.512676	3:-85599345	MsG0380016603.01.T01:CDS
ATTGTGAAGAGAAATGAAAA+GGG	0.512927	3:+85600153	None:intergenic
GTTTCAGTCTGAAGATGAAA+GGG	0.512987	3:-85598206	MsG0380016603.01.T01:intron
GCAGTCAAACCCCAGCAGCA+AGG	0.514919	3:+85596075	None:intergenic
TGTTTCAGTCTGAAGATGAA+AGG	0.515245	3:-85598207	MsG0380016603.01.T01:intron
GCAAATCGGAGAATAGAATT+GGG	0.516838	3:+85598566	None:intergenic
AAAGAGAAGAGATGATTAGG+AGG	0.524216	3:-85599145	MsG0380016603.01.T01:CDS
AATCATGGCTACTTAGCTGC+TGG	0.525224	3:-85599411	MsG0380016603.01.T01:CDS
GGTATCTTTGTTTCCCATTG+CGG	0.527623	3:-85595963	MsG0380016603.01.T01:three_prime_UTR
GCACGGACTGGTGTCTTTGA+CGG	0.529105	3:+85596137	None:intergenic
CATTGTTCACCATAAACTGC+TGG	0.530549	3:+85599571	None:intergenic
GTAGAGTTGATGGTACTTCG+AGG	0.532448	3:-85595918	MsG0380016603.01.T01:three_prime_UTR
TTATACATGCAGAGAGTGCA+AGG	0.533976	3:-85598441	MsG0380016603.01.T01:intron
AGTCTGTCTGGAACTATGCT+GGG	0.535887	3:-85598409	MsG0380016603.01.T01:CDS
GGGTAACCAAACCCAGCAGC+AGG	0.537106	3:+85599387	None:intergenic
AGGCACAAATTCCTCAGCCA+TGG	0.537373	3:+85599449	None:intergenic
AGCTTCAAGACTCATCAAAT+GGG	0.539915	3:-85599612	MsG0380016603.01.T01:CDS
CTGCACAAACATTGACAAGA+AGG	0.541546	3:-85598161	MsG0380016603.01.T01:intron
CCATCGACTGAGGCTTCTTG+GGG	0.542498	3:-85597780	MsG0380016603.01.T01:CDS
ATGCAATCCGAGTTGAATGC+TGG	0.545014	3:+85597753	None:intergenic
ATCAACTGTCCTTGCTGCTG+GGG	0.545550	3:-85596084	MsG0380016603.01.T01:three_prime_UTR
CCCCAAGAAGCCTCAGTCGA+TGG	0.545706	3:+85597780	None:intergenic
GGAGAAGAACGAGCACGGAC+TGG	0.546895	3:+85596125	None:intergenic
GCGAAGAGCGAATCATAAAG+TGG	0.552369	3:-85599177	MsG0380016603.01.T01:CDS
CCGTCGCTAACAAATAATCA+TGG	0.562558	3:-85599426	MsG0380016603.01.T01:CDS
TCTCTTTCTTAATTGCGGCC+AGG	0.567558	3:-85598959	MsG0380016603.01.T01:intron
CTTTGAATCTATCTGTGGAG+AGG	0.569385	3:-85597986	MsG0380016603.01.T01:intron
CGAAGAACCCATTACCGCAA+TGG	0.569551	3:+85595949	None:intergenic
AATGATGGATATGTGATGAA+TGG	0.569689	3:-85599552	MsG0380016603.01.T01:CDS
GTTGTTGTTCACATCCTGAT+CGG	0.571533	3:+85599671	None:intergenic
TGATTATTTGTTAGCGACGG+AGG	0.572810	3:+85599429	None:intergenic
CACTTCTTTGAATCTATCTG+TGG	0.573834	3:-85597991	MsG0380016603.01.T01:CDS
GGCACAAATTCCTCAGCCAT+GGG	0.576547	3:+85599450	None:intergenic
ATGGCTGTTGCTGAAAATGT+TGG	0.578892	3:-85599789	MsG0380016603.01.T01:CDS
TGTCGGATTGACAGGTGCAA+TGG	0.579326	3:+85598351	None:intergenic
AGCCATAATCACTTCTCTTG+AGG	0.582137	3:+85599806	None:intergenic
CCATGATTATTTGTTAGCGA+CGG	0.584715	3:+85599426	None:intergenic
GTTGTTGATTGTCGGGTATG+CGG	0.593806	3:-85598593	MsG0380016603.01.T01:CDS
TAGTCACATTTCACAACCCA+AGG	0.594675	3:-85600249	MsG0380016603.01.T01:five_prime_UTR
AAAGCTGAATCCCATGGCTG+AGG	0.595003	3:-85599460	MsG0380016603.01.T01:CDS
GGGATTACCAGCATTCAACT+CGG	0.596095	3:-85597760	MsG0380016603.01.T01:CDS
ATCATCTGACTCAACTGAGG+TGG	0.609851	3:-85599712	MsG0380016603.01.T01:CDS
TTGGGACGTTCTTCTCAGGA+AGG	0.612224	3:-85600218	MsG0380016603.01.T01:five_prime_UTR
AAGTATCAACTAAACGCCAC+AGG	0.617637	3:+85596007	None:intergenic
ATTGCAGCTCTAAGCTGCAG+TGG	0.625007	3:-85596286	MsG0380016603.01.T01:CDS
TACGAGGAGAAGAACGAGCA+CGG	0.626781	3:+85596120	None:intergenic
CTAACGGCCAAACTAACCGT+AGG	0.628743	3:-85599329	MsG0380016603.01.T01:CDS
GTCTGTCTGGAACTATGCTG+GGG	0.640656	3:-85598408	MsG0380016603.01.T01:CDS
TGCATTTGTTGAGTTCGCAG+TGG	0.641475	3:-85597735	MsG0380016603.01.T01:intron
ATGAGAAATGGTGAGAATGG+AGG	0.651521	3:-85599528	MsG0380016603.01.T01:CDS
TAACGGCCAAACTAACCGTA+GGG	0.656336	3:-85599328	MsG0380016603.01.T01:intron
TTATCTAGGTCCATCGACTG+AGG	0.678332	3:-85597790	MsG0380016603.01.T01:intron
TATATGTTCCAAAGAACCTG+TGG	0.697100	3:-85596023	MsG0380016603.01.T01:three_prime_UTR
GTTGTCAAAGCTGAATCCCA+TGG	0.699172	3:-85599466	MsG0380016603.01.T01:CDS
CGTATCATCTGACTCAACTG+AGG	0.701261	3:-85599715	MsG0380016603.01.T01:CDS
AGGTGGAGAAATCGAAACCG+AGG	0.703142	3:-85599695	MsG0380016603.01.T01:CDS
TATACATGCAGAGAGTGCAA+GGG	0.703869	3:-85598440	MsG0380016603.01.T01:intron
GATTCAGTTCATGGACTACG+AGG	0.724532	3:+85596104	None:intergenic
GATCAGGATGTGAACAACAA+CGG	0.735570	3:-85599669	MsG0380016603.01.T01:CDS
TTGAGTCAGATGATACGACG+TGG	0.773827	3:+85599721	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAATTTAATTAAAAATAT+TGG	+	Chr3:85595806-85595825	None:intergenic	0.0%
!!!	TAAAATATTTTTCATTGTTT+TGG	-	Chr3:85598299-85598318	MsG0380016603.01.T01:intron	10.0%
!!!	TTATTTATTTATTTTTTCTG+GGG	-	Chr3:85596042-85596061	MsG0380016603.01.T01:three_prime_UTR	10.0%
!!	ACTAATTTAATCATATACAA+AGG	-	Chr3:85597316-85597335	MsG0380016603.01.T01:intron	15.0%
!!	ATGGAAATTAAATGAAAAAT+TGG	-	Chr3:85595778-85595797	MsG0380016603.01.T01:three_prime_UTR	15.0%
!!	ATTTAGTAAACTTACTTTAA+TGG	-	Chr3:85599265-85599284	MsG0380016603.01.T01:intron	15.0%
!!	TGGAAATTAAATGAAAAATT+GGG	-	Chr3:85595779-85595798	MsG0380016603.01.T01:three_prime_UTR	15.0%
!!	TGTTTATATAATCTATTCTA+AGG	+	Chr3:85598932-85598951	None:intergenic	15.0%
!!!	ATATTTTAGCATTTTACTAA+GGG	+	Chr3:85599672-85599691	None:intergenic	15.0%
!!!	TAAGAAGTATAAAATTGTTA+GGG	+	Chr3:85596752-85596771	None:intergenic	15.0%
!!!	TATATTTTAGCATTTTACTA+AGG	+	Chr3:85599673-85599692	None:intergenic	15.0%
!!!	TTAAGAAGTATAAAATTGTT+AGG	+	Chr3:85596753-85596772	None:intergenic	15.0%
!!	AAAAATAGGATGTAGTTATA+GGG	+	Chr3:85598571-85598590	None:intergenic	20.0%
!!	AATAATTATGCTAATGCTAA+CGG	-	Chr3:85596771-85596790	MsG0380016603.01.T01:intron	20.0%
!!	AATCTGATATTAGAGAATAA+AGG	-	Chr3:85596274-85596293	MsG0380016603.01.T01:CDS	20.0%
!!	CATGGAATATATCAATATAA+TGG	+	Chr3:85598230-85598249	None:intergenic	20.0%
!!	CATTATATTGATATATTCCA+TGG	-	Chr3:85598228-85598247	MsG0380016603.01.T01:intron	20.0%
!!	TAAAAATAGGATGTAGTTAT+AGG	+	Chr3:85598572-85598591	None:intergenic	20.0%
!!	TAGTGAAGTTATTAATTCTA+AGG	-	Chr3:85599115-85599134	MsG0380016603.01.T01:CDS	20.0%
!!	TCCAAATTCATAAATAAACA+AGG	+	Chr3:85598757-85598776	None:intergenic	20.0%
!!	TGCTAAAATATATGAAGTAT+TGG	-	Chr3:85599681-85599700	MsG0380016603.01.T01:CDS	20.0%
!!	TTATTGACAGAAGTAAAAAT+AGG	+	Chr3:85598585-85598604	None:intergenic	20.0%
!!!	AAACAAACATGAAGATTTTA+AGG	+	Chr3:85596090-85596109	None:intergenic	20.0%
!!!	ATTGTCATTTGTACTATTTA+GGG	-	Chr3:85597438-85597457	MsG0380016603.01.T01:intron	20.0%
!!!	ATTTTTTGATACAGATTTGA+AGG	-	Chr3:85596249-85596268	MsG0380016603.01.T01:intron	20.0%
!!!	TAATGATTGTTGTTTTATGT+CGG	-	Chr3:85597104-85597123	MsG0380016603.01.T01:intron	20.0%
!!!	TATTTTAGCATTTTACTAAG+GGG	+	Chr3:85599671-85599690	None:intergenic	20.0%
!!!	TCCTTGTTTATTTATGAATT+TGG	-	Chr3:85598753-85598772	MsG0380016603.01.T01:intron	20.0%
!!!	TGGTTTTGTTCTTAATTAAT+TGG	-	Chr3:85599627-85599646	MsG0380016603.01.T01:CDS	20.0%
!!!	TTTTTCTTATGATGTTTTGT+GGG	-	Chr3:85596190-85596209	MsG0380016603.01.T01:intron	20.0%
!!!	TTTTTTCTTATGATGTTTTG+TGG	-	Chr3:85596189-85596208	MsG0380016603.01.T01:intron	20.0%
!!!	TTTTTTGATACAGATTTGAA+GGG	-	Chr3:85596250-85596269	MsG0380016603.01.T01:intron	20.0%
!	AAAAAAACATCATAGCGTAT+CGG	+	Chr3:85597189-85597208	None:intergenic	25.0%
!	AAACAGTTCATGACTAAAAA+AGG	+	Chr3:85600327-85600346	None:intergenic	25.0%
!	AACAATAGTAAATTATGCGT+CGG	-	Chr3:85597343-85597362	MsG0380016603.01.T01:intron	25.0%
!	AACTTCACTAATTCAAACTA+AGG	+	Chr3:85599105-85599124	None:intergenic	25.0%
!	ACAAACGAAAAAAAGAAAAG+AGG	+	Chr3:85597872-85597891	None:intergenic	25.0%
!	ACGCATAATTTACTATTGTT+TGG	+	Chr3:85597343-85597362	None:intergenic	25.0%
!	AGGTAAATTATTATTCACTC+TGG	+	Chr3:85597852-85597871	None:intergenic	25.0%
!	ATAACTTCACAAAGCAATAT+AGG	+	Chr3:85598482-85598501	None:intergenic	25.0%
!	ATTGTGAAGAGAAATGAAAA+GGG	+	Chr3:85595966-85595985	None:intergenic	25.0%
!	CAAAAAATTGTTATCAAACC+AGG	+	Chr3:85596237-85596256	None:intergenic	25.0%
!	CACTTTCATTTAATCTTACT+TGG	-	Chr3:85597994-85598013	MsG0380016603.01.T01:CDS	25.0%
!	GCATATGAACAACAAATATT+TGG	+	Chr3:85597611-85597630	None:intergenic	25.0%
!	TACAATTGAAGAGTTGAATA+AGG	+	Chr3:85598991-85599010	None:intergenic	25.0%
!	TAGTACAAATGACAATGTAA+CGG	+	Chr3:85597434-85597453	None:intergenic	25.0%
!	TATTGTGAAGAGAAATGAAA+AGG	+	Chr3:85595967-85595986	None:intergenic	25.0%
!	TTAGTCATGAACTGTTTATT+TGG	-	Chr3:85600330-85600349	MsG0380016603.01.T01:five_prime_UTR	25.0%
!	TTGAGCAAATAAAAGTAAGA+AGG	+	Chr3:85598429-85598448	None:intergenic	25.0%
!	TTTCATTTAATCTTACTTGG+AGG	-	Chr3:85597997-85598016	MsG0380016603.01.T01:CDS	25.0%
!	TTTGTTTGATCTTATGTCAT+TGG	-	Chr3:85596103-85596122	MsG0380016603.01.T01:exon	25.0%
!!	AAGAGAGAATTTGAAATTGA+CGG	+	Chr3:85599450-85599469	None:intergenic	25.0%
!!	ATTTATTATGTTAGCTCTTG+TGG	-	Chr3:85598677-85598696	MsG0380016603.01.T01:intron	25.0%
!!	ATTTGCTGAAATTAGCTTAT+GGG	+	Chr3:85598898-85598917	None:intergenic	25.0%
!!	CATTGTCATTTGTACTATTT+AGG	-	Chr3:85597437-85597456	MsG0380016603.01.T01:intron	25.0%
!!	GCAATACTAAAATGATTTGT+CGG	-	Chr3:85597397-85597416	MsG0380016603.01.T01:intron	25.0%
!!	TTTATTATGTTAGCTCTTGT+GGG	-	Chr3:85598678-85598697	MsG0380016603.01.T01:intron	25.0%
!!!	AATTTGCTGAAATTAGCTTA+TGG	+	Chr3:85598899-85598918	None:intergenic	25.0%
!!!	ATGTTTTGTTTGTTTAAGAG+AGG	+	Chr3:85599247-85599266	None:intergenic	25.0%
!!!	ATTGTTTTGGTGTATTATCT+AGG	-	Chr3:85598312-85598331	MsG0380016603.01.T01:intron	25.0%
!!!	ATTTTAGCATTTTACTAAGG+GGG	+	Chr3:85599670-85599689	None:intergenic	25.0%
!!!	CAAATCATTTTAGTATTGCT+TGG	+	Chr3:85597396-85597415	None:intergenic	25.0%
!!!	TAGTAGTTTTTAATGGATCT+TGG	-	Chr3:85598154-85598173	MsG0380016603.01.T01:intron	25.0%
!!!	TGTTTTTTTTGTTTACTTCC+TGG	-	Chr3:85596216-85596235	MsG0380016603.01.T01:intron	25.0%
!!!	TTATTTTTTCTGGGGTTTTA+AGG	-	Chr3:85596050-85596069	MsG0380016603.01.T01:three_prime_UTR	25.0%
!!!	TTTTCTCTTGATTGTTTTTC+AGG	+	Chr3:85598652-85598671	None:intergenic	25.0%
!!!	TTTTTAGTTATCTTTGCAGT+TGG	-	Chr3:85599607-85599626	MsG0380016603.01.T01:CDS	25.0%
	AACAAAATATCCATACCCTA+CGG	+	Chr3:85596806-85596825	None:intergenic	30.0%
	AACATCCAACCATAAAATTC+TGG	+	Chr3:85600272-85600291	None:intergenic	30.0%
	ACAAATGATAACTACAAACC+CGG	+	Chr3:85598526-85598545	None:intergenic	30.0%
	AGAAAAGAGAAGAGATGATT+AGG	-	Chr3:85596968-85596987	MsG0380016603.01.T01:intron	30.0%
	ATATGATCTGATATCATCGA+AGG	-	Chr3:85597282-85597301	MsG0380016603.01.T01:intron	30.0%
	CAGATCATATAGATTCATCA+TGG	+	Chr3:85597272-85597291	None:intergenic	30.0%
	GCAAATAAAAGTAAGAAGGT+TGG	+	Chr3:85598425-85598444	None:intergenic	30.0%
	GCAGTGAAAATATGTTGTAA+TGG	-	Chr3:85598801-85598820	MsG0380016603.01.T01:intron	30.0%
	GGTAAACCATCATTAAGAAA+GGG	+	Chr3:85597468-85597487	None:intergenic	30.0%
	GTGAAAATATGTTGTAATGG+TGG	-	Chr3:85598804-85598823	MsG0380016603.01.T01:intron	30.0%
	TAAACTCAATGAAGGCAAAT+CGG	+	Chr3:85597567-85597586	None:intergenic	30.0%
	TGAGCTTACAAATTTCAACT+TGG	-	Chr3:85599154-85599173	MsG0380016603.01.T01:CDS	30.0%
	TGATTGCTACAAATCAGATA+CGG	+	Chr3:85598040-85598059	None:intergenic	30.0%
	TGGTAAACCATCATTAAGAA+AGG	+	Chr3:85597469-85597488	None:intergenic	30.0%
	TTCATCTGTAAACTCAATGA+AGG	+	Chr3:85597575-85597594	None:intergenic	30.0%
	TTCATTGAGTTTACAGATGA+AGG	-	Chr3:85597574-85597593	MsG0380016603.01.T01:intron	30.0%
!	ATTGACAAGAAGGTAGTTTT+GGG	-	Chr3:85597965-85597984	MsG0380016603.01.T01:intron	30.0%
!	CTCTTTCATTATTTTCGTGT+TGG	-	Chr3:85596831-85596850	MsG0380016603.01.T01:intron	30.0%
!	GAGAGGTTAGTAGTTTTTAA+TGG	-	Chr3:85598147-85598166	MsG0380016603.01.T01:intron	30.0%
!	TATCTGATTTGTAGCAATCA+AGG	-	Chr3:85598040-85598059	MsG0380016603.01.T01:intron	30.0%
!	TGAAGCTGTAATTACCATTT+TGG	+	Chr3:85596491-85596510	None:intergenic	30.0%
!	TTGCCATGTCTTTTCTTTTT+TGG	-	Chr3:85599761-85599780	MsG0380016603.01.T01:CDS	30.0%
!	TTTTATGGTTGGATGTTATC+TGG	-	Chr3:85600275-85600294	MsG0380016603.01.T01:five_prime_UTR	30.0%
!!	AATGATGGATATGTGATGAA+TGG	-	Chr3:85596564-85596583	MsG0380016603.01.T01:intron	30.0%
!!	GGATGGAAATTAAAAGCATT+GGG	+	Chr3:85599373-85599392	None:intergenic	30.0%
!!	TACAATGATGTGTTTTTCAG+AGG	-	Chr3:85596890-85596909	MsG0380016603.01.T01:intron	30.0%
!!	TACTTTTATTTGCTCAACTC+TGG	-	Chr3:85598432-85598451	MsG0380016603.01.T01:CDS	30.0%
!!	TGTTGCTTGCATATTCTTTT+GGG	-	Chr3:85599335-85599354	MsG0380016603.01.T01:CDS	30.0%
!!	TTTTGTTTGTTTAAGAGAGG+AGG	+	Chr3:85599244-85599263	None:intergenic	30.0%
!!!	AATTACCATTTTGGTGTTGA+TGG	+	Chr3:85596482-85596501	None:intergenic	30.0%
!!!	TGTTTTTCAGGACTTTTAGT+AGG	+	Chr3:85598640-85598659	None:intergenic	30.0%
	AAAAGTCAGTTCAGCGAAAT+CGG	-	Chr3:85595925-85595944	MsG0380016603.01.T01:three_prime_UTR	35.0%
	AAAGAGAAGAGATGATTAGG+AGG	-	Chr3:85596971-85596990	MsG0380016603.01.T01:intron	35.0%
	AAGAATGGCTACACTACTAA+TGG	-	Chr3:85596913-85596932	MsG0380016603.01.T01:intron	35.0%
	AATAGGATGTAGTTATAGGG+AGG	+	Chr3:85598568-85598587	None:intergenic	35.0%
	AATTAGTGAAAGAGAGAGAG+TGG	+	Chr3:85596013-85596032	None:intergenic	35.0%
	AGCGAATCATAAAGTGGATA+TGG	-	Chr3:85596945-85596964	MsG0380016603.01.T01:intron	35.0%
	AGCTTCAAGACTCATCAAAT+GGG	-	Chr3:85596504-85596523	MsG0380016603.01.T01:intron	35.0%
	AGTATAAGTAAAGCAGCTAC+AGG	+	Chr3:85599412-85599431	None:intergenic	35.0%
	AGTTATTAGTCAGCTATGCT+TGG	-	Chr3:85599075-85599094	MsG0380016603.01.T01:intron	35.0%
	ATAGGATGTAGTTATAGGGA+GGG	+	Chr3:85598567-85598586	None:intergenic	35.0%
	ATCTTAACCACTCTTATGTC+TGG	-	Chr3:85599942-85599961	MsG0380016603.01.T01:intron	35.0%
	ATTACCCTGGGTAAAAATGT+CGG	+	Chr3:85597785-85597804	None:intergenic	35.0%
	CAACTGTCCTAAAAACTTCA+GGG	-	Chr3:85599904-85599923	MsG0380016603.01.T01:intron	35.0%
	CACTTCTTTGAATCTATCTG+TGG	-	Chr3:85598125-85598144	MsG0380016603.01.T01:intron	35.0%
	CAGCCAAAAAAGAAAAGACA+TGG	+	Chr3:85599767-85599786	None:intergenic	35.0%
	CAGTTTATGGTGAACAATGA+TGG	-	Chr3:85596549-85596568	MsG0380016603.01.T01:intron	35.0%
	CATGAAAAGCTAAGATGGAA+AGG	+	Chr3:85598714-85598733	None:intergenic	35.0%
	GCAAATCGGAGAATAGAATT+GGG	+	Chr3:85597553-85597572	None:intergenic	35.0%
	GCATCTCTCTTTCTTAATTG+CGG	-	Chr3:85597152-85597171	MsG0380016603.01.T01:intron	35.0%
	GTGATGAATGGTATGAGAAA+TGG	-	Chr3:85596576-85596595	MsG0380016603.01.T01:intron	35.0%
	GTTTCAGTCTGAAGATGAAA+GGG	-	Chr3:85597910-85597929	MsG0380016603.01.T01:intron	35.0%
	TACCTCAAGAGAAGTGATTA+TGG	-	Chr3:85596308-85596327	MsG0380016603.01.T01:intron	35.0%
	TATATGTTCCAAAGAACCTG+TGG	-	Chr3:85600093-85600112	MsG0380016603.01.T01:intron	35.0%
	TCAACTGTCCTAAAAACTTC+AGG	-	Chr3:85599903-85599922	MsG0380016603.01.T01:intron	35.0%
	TGGCTTACAATGCTTATTGT+TGG	-	Chr3:85598174-85598193	MsG0380016603.01.T01:CDS	35.0%
	TGTTTCAGTCTGAAGATGAA+AGG	-	Chr3:85597909-85597928	MsG0380016603.01.T01:intron	35.0%
	TTCAACCATCAACACCAAAA+TGG	-	Chr3:85596474-85596493	MsG0380016603.01.T01:intron	35.0%
	TTTCTTTGCCTCATTCTTTC+AGG	-	Chr3:85599796-85599815	MsG0380016603.01.T01:exon	35.0%
	TTTGCCATGAAAAGCTAAGA+TGG	+	Chr3:85598719-85598738	None:intergenic	35.0%
!	AACAGTTCCCTGAAGTTTTT+AGG	+	Chr3:85599914-85599933	None:intergenic	35.0%
!	CATGTCCAGAATTTTATGGT+TGG	-	Chr3:85600264-85600283	MsG0380016603.01.T01:five_prime_UTR	35.0%
!	CATTGACAAGAAGGTAGTTT+TGG	-	Chr3:85597964-85597983	MsG0380016603.01.T01:intron	35.0%
!	CCATGATTATTTGTTAGCGA+CGG	+	Chr3:85596693-85596712	None:intergenic	35.0%
!	CTTGCATGTCCAGAATTTTA+TGG	-	Chr3:85600260-85600279	MsG0380016603.01.T01:five_prime_UTR	35.0%
!	GGGATGGAAATTAAAAGCAT+TGG	+	Chr3:85599374-85599393	None:intergenic	35.0%
!	GGTTTTCCCTTTCTTAATGA+TGG	-	Chr3:85597459-85597478	MsG0380016603.01.T01:intron	35.0%
!	GTTGCTTGCATATTCTTTTG+GGG	-	Chr3:85599336-85599355	MsG0380016603.01.T01:CDS	35.0%
!!	AAACTCAAGCATTGAAACCA+TGG	+	Chr3:85598248-85598267	None:intergenic	35.0%
!!	AACTAAGAAAAGCATTACCC+TGG	+	Chr3:85597798-85597817	None:intergenic	35.0%
!!	ACTAAGAAAAGCATTACCCT+GGG	+	Chr3:85597797-85597816	None:intergenic	35.0%
!!	ATTTCGCTGAACTGACTTTT+TGG	+	Chr3:85595925-85595944	None:intergenic	35.0%
!!	CTTTCCATCTTAGCTTTTCA+TGG	-	Chr3:85598712-85598731	MsG0380016603.01.T01:intron	35.0%
!!	GAAAATGTTGGTGCCAAAAT+CGG	-	Chr3:85596339-85596358	MsG0380016603.01.T01:intron	35.0%
!!	GAAATGAAAAGGGTGTTGTT+CGG	+	Chr3:85595956-85595975	None:intergenic	35.0%
!!	GTTGTTTTATGTCGGAATCT+AGG	-	Chr3:85597112-85597131	MsG0380016603.01.T01:intron	35.0%
!!	TGTGTTTTTCAGAGGAAGAA+TGG	-	Chr3:85596898-85596917	MsG0380016603.01.T01:intron	35.0%
!!	TTTTCAGGACTTTTAGTAGG+CGG	+	Chr3:85598637-85598656	None:intergenic	35.0%
!!!	AGAGTTTTAAGCGTGAAATG+AGG	-	Chr3:85596613-85596632	MsG0380016603.01.T01:intron	35.0%
!!!	CATGTCTTTTCTTTTTTGGC+TGG	-	Chr3:85599765-85599784	MsG0380016603.01.T01:CDS	35.0%
!!!	GAGTTTTAAGCGTGAAATGA+GGG	-	Chr3:85596614-85596633	MsG0380016603.01.T01:intron	35.0%
!!!	GTGTTGCTTGCATATTCTTT+TGG	-	Chr3:85599334-85599353	MsG0380016603.01.T01:CDS	35.0%
!!!	TAAAGGAGTTTTTTACCAGG+AGG	+	Chr3:85599538-85599557	None:intergenic	35.0%
!!!	TGCTAAAGGAGTTTTTTACC+AGG	+	Chr3:85599541-85599560	None:intergenic	35.0%
	AAGTATCAACTAAACGCCAC+AGG	+	Chr3:85600112-85600131	None:intergenic	40.0%
	ACAACCCAAGGACATCAAAT+TGG	-	Chr3:85595879-85595898	MsG0380016603.01.T01:three_prime_UTR	40.0%
	AGCCATAATCACTTCTCTTG+AGG	+	Chr3:85596313-85596332	None:intergenic	40.0%
	ATGAGAAATGGTGAGAATGG+AGG	-	Chr3:85596588-85596607	MsG0380016603.01.T01:intron	40.0%
	ATGGCTGTTGCTGAAAATGT+TGG	-	Chr3:85596327-85596346	MsG0380016603.01.T01:intron	40.0%
	CAACCCAAGGACATCAAATT+GGG	-	Chr3:85595880-85595899	MsG0380016603.01.T01:three_prime_UTR	40.0%
	CAGCTTCAAGACTCATCAAA+TGG	-	Chr3:85596503-85596522	MsG0380016603.01.T01:intron	40.0%
	CATTGTTCACCATAAACTGC+TGG	+	Chr3:85596548-85596567	None:intergenic	40.0%
	CCGTCGCTAACAAATAATCA+TGG	-	Chr3:85596690-85596709	MsG0380016603.01.T01:intron	40.0%
	CGGTTCATCAAGTCAGAATT+TGG	-	Chr3:85596359-85596378	MsG0380016603.01.T01:intron	40.0%
	CTGCACAAACATTGACAAGA+AGG	-	Chr3:85597955-85597974	MsG0380016603.01.T01:intron	40.0%
	CTTTGAATCTATCTGTGGAG+AGG	-	Chr3:85598130-85598149	MsG0380016603.01.T01:intron	40.0%
	GATCAGGATGTGAACAACAA+CGG	-	Chr3:85596447-85596466	MsG0380016603.01.T01:intron	40.0%
	GGCAAATCGGAGAATAGAAT+TGG	+	Chr3:85597554-85597573	None:intergenic	40.0%
	GGTAAAAATGTCGGATTGAC+AGG	+	Chr3:85597776-85597795	None:intergenic	40.0%
	GGTATGAGAAATGGTGAGAA+TGG	-	Chr3:85596585-85596604	MsG0380016603.01.T01:intron	40.0%
	TAAGCGTGAAATGAGGGATT+TGG	-	Chr3:85596620-85596639	MsG0380016603.01.T01:intron	40.0%
	TAGTCACATTTCACAACCCA+AGG	-	Chr3:85595867-85595886	MsG0380016603.01.T01:three_prime_UTR	40.0%
	TCTGATATTGATCAGCTGGT+AGG	-	Chr3:85597006-85597025	MsG0380016603.01.T01:intron	40.0%
	TCTTACTTGGAGGAAATGCT+TGG	-	Chr3:85598007-85598026	MsG0380016603.01.T01:CDS	40.0%
	TGAAATCCAGCGAACCTTAT+AGG	+	Chr3:85599875-85599894	None:intergenic	40.0%
	TGTTCAGAACCAGCAGTTTA+TGG	-	Chr3:85596536-85596555	MsG0380016603.01.T01:intron	40.0%
	TTGTTCTCTGTCTTGCACTA+TGG	-	Chr3:85600132-85600151	MsG0380016603.01.T01:intron	40.0%
	TTGTTTCCCATTGCGGTAAT+GGG	-	Chr3:85600160-85600179	MsG0380016603.01.T01:five_prime_UTR	40.0%
	TTTGTTTCCCATTGCGGTAA+TGG	-	Chr3:85600159-85600178	MsG0380016603.01.T01:five_prime_UTR	40.0%
!	AGGACAGTTGATTCAGTTCA+TGG	+	Chr3:85600024-85600043	None:intergenic	40.0%
!	CAATCCGACATTTTTACCCA+GGG	-	Chr3:85597778-85597797	MsG0380016603.01.T01:CDS	40.0%
!	GGTATCTTTGTTTCCCATTG+CGG	-	Chr3:85600153-85600172	MsG0380016603.01.T01:five_prime_UTR	40.0%
!	GTTGTTGTTCACATCCTGAT+CGG	+	Chr3:85596448-85596467	None:intergenic	40.0%
!	TATACATGCAGAGAGTGCAA+GGG	-	Chr3:85597676-85597695	MsG0380016603.01.T01:intron	40.0%
!	TCAATCCGACATTTTTACCC+AGG	-	Chr3:85597777-85597796	MsG0380016603.01.T01:CDS	40.0%
!	TGATTATTTGTTAGCGACGG+AGG	+	Chr3:85596690-85596709	None:intergenic	40.0%
!	TTATACATGCAGAGAGTGCA+AGG	-	Chr3:85597675-85597694	MsG0380016603.01.T01:intron	40.0%
!!	ACAGCTTGGTTTGTGAGTTA+GGG	+	Chr3:85599566-85599585	None:intergenic	40.0%
!!	CGTTTAGCTTGTAGAGTTGA+TGG	-	Chr3:85600188-85600207	MsG0380016603.01.T01:five_prime_UTR	40.0%
!!	CTGACTTGATGAACCGATTT+TGG	+	Chr3:85596355-85596374	None:intergenic	40.0%
!!!	AGTTTTTAGAGCTTGAGTCC+TGG	-	Chr3:85599503-85599522	MsG0380016603.01.T01:CDS	40.0%
	AACTCGTATTTCCTGGCTGT+AGG	-	Chr3:85597501-85597520	MsG0380016603.01.T01:intron	45.0%
	AATCAACTGTCCTTGCTGCT+GGG	-	Chr3:85600031-85600050	MsG0380016603.01.T01:intron	45.0%
	AATCATGGCTACTTAGCTGC+TGG	-	Chr3:85596705-85596724	MsG0380016603.01.T01:intron	45.0%
	ACAATCAACAACCTACAGCC+AGG	+	Chr3:85597515-85597534	None:intergenic	45.0%
	ACAGGAGATGCGGAAAAAGT+GGG	+	Chr3:85599394-85599413	None:intergenic	45.0%
	ACGTCCCAATTTGATGTCCT+TGG	+	Chr3:85595887-85595906	None:intergenic	45.0%
	ACTAAACGCCACAGGTTCTT+TGG	+	Chr3:85600104-85600123	None:intergenic	45.0%
	ACTCTCAGCCTGAAAGAATG+AGG	+	Chr3:85599807-85599826	None:intergenic	45.0%
	ACTCTTATGTCTGGTGTGCA+GGG	-	Chr3:85599951-85599970	MsG0380016603.01.T01:intron	45.0%
	ATCATCTGACTCAACTGAGG+TGG	-	Chr3:85596404-85596423	MsG0380016603.01.T01:intron	45.0%
	CAAATTGGGACGTTCTTCTC+AGG	-	Chr3:85595894-85595913	MsG0380016603.01.T01:three_prime_UTR	45.0%
	CCGGCAGTAAACTAATCTCA+GGG	+	Chr3:85598507-85598526	None:intergenic	45.0%
	CGTATCATCTGACTCAACTG+AGG	-	Chr3:85596401-85596420	MsG0380016603.01.T01:intron	45.0%
	CGTCCCAATTTGATGTCCTT+GGG	+	Chr3:85595886-85595905	None:intergenic	45.0%
	CGTGTCTGATATTGATCAGC+TGG	-	Chr3:85597002-85597021	MsG0380016603.01.T01:intron	45.0%
	GAAGAACCCATTACCGCAAT+GGG	+	Chr3:85600169-85600188	None:intergenic	45.0%
	GATGTAGTTATAGGGAGGGA+GGG	+	Chr3:85598563-85598582	None:intergenic	45.0%
	GCGAAGAGCGAATCATAAAG+TGG	-	Chr3:85596939-85596958	MsG0380016603.01.T01:intron	45.0%
	GGGATTACCAGCATTCAACT+CGG	-	Chr3:85598356-85598375	MsG0380016603.01.T01:CDS	45.0%
	GTTGTCAAAGCTGAATCCCA+TGG	-	Chr3:85596650-85596669	MsG0380016603.01.T01:intron	45.0%
	TAAAGCAGCTACAGGAGATG+CGG	+	Chr3:85599404-85599423	None:intergenic	45.0%
	TAACGGCCAAACTAACCGTA+GGG	-	Chr3:85596788-85596807	MsG0380016603.01.T01:intron	45.0%
	TACAGGAGATGCGGAAAAAG+TGG	+	Chr3:85599395-85599414	None:intergenic	45.0%
	TCTCTTTCTTAATTGCGGCC+AGG	-	Chr3:85597157-85597176	MsG0380016603.01.T01:intron	45.0%
	TGTGAGTTAGGGGATGCTAA+AGG	+	Chr3:85599555-85599574	None:intergenic	45.0%
	TTACTAAGGGGGAGAAGATC+AGG	+	Chr3:85599659-85599678	None:intergenic	45.0%
	TTGAGTCAGATGATACGACG+TGG	+	Chr3:85596398-85596417	None:intergenic	45.0%
!	AAGCTGCAGTGGTGTGATTT+TGG	-	Chr3:85599841-85599860	MsG0380016603.01.T01:five_prime_UTR	45.0%
!	AAGTCTGTCTGGAACTATGC+TGG	-	Chr3:85597706-85597725	MsG0380016603.01.T01:intron	45.0%
!	AGCTGCAGTGGTGTGATTTT+GGG	-	Chr3:85599842-85599861	MsG0380016603.01.T01:five_prime_UTR	45.0%
!	AGTCTGTCTGGAACTATGCT+GGG	-	Chr3:85597707-85597726	MsG0380016603.01.T01:intron	45.0%
!	ATGCAATCCGAGTTGAATGC+TGG	+	Chr3:85598366-85598385	None:intergenic	45.0%
!	CCAGGAAATACGAGTTGACA+CGG	+	Chr3:85597497-85597516	None:intergenic	45.0%
!	GATTCAGTTCATGGACTACG+AGG	+	Chr3:85600015-85600034	None:intergenic	45.0%
!	GCTGTAGGTTGTTGATTGTC+GGG	-	Chr3:85597516-85597535	MsG0380016603.01.T01:intron	45.0%
!	GGCTGTAGGTTGTTGATTGT+CGG	-	Chr3:85597515-85597534	MsG0380016603.01.T01:intron	45.0%
!	GTTGTTGATTGTCGGGTATG+CGG	-	Chr3:85597523-85597542	MsG0380016603.01.T01:intron	45.0%
!	TACGAGTTGACACGGTAACA+TGG	+	Chr3:85597489-85597508	None:intergenic	45.0%
!	TCCATACCCTACGGTTAGTT+TGG	+	Chr3:85596797-85596816	None:intergenic	45.0%
!	TGCATTTGTTGAGTTCGCAG+TGG	-	Chr3:85598381-85598400	MsG0380016603.01.T01:CDS	45.0%
!	TTATCTAGGTCCATCGACTG+AGG	-	Chr3:85598326-85598345	MsG0380016603.01.T01:intron	45.0%
!!	ATAGCGTATCGGTTACTACC+TGG	+	Chr3:85597178-85597197	None:intergenic	45.0%
!!	CAGCTTGGTTTGTGAGTTAG+GGG	+	Chr3:85599565-85599584	None:intergenic	45.0%
!!	CCCTGAGATTAGTTTACTGC+CGG	-	Chr3:85598504-85598523	MsG0380016603.01.T01:intron	45.0%
!!	CCTGAGATTAGTTTACTGCC+GGG	-	Chr3:85598505-85598524	MsG0380016603.01.T01:intron	45.0%
!!	GACAGCTTGGTTTGTGAGTT+AGG	+	Chr3:85599567-85599586	None:intergenic	45.0%
!!	GTAGAGTTGATGGTACTTCG+AGG	-	Chr3:85600198-85600217	MsG0380016603.01.T01:five_prime_UTR	45.0%
!!!	TTTTTTACCAGGAGGCAGGA+GGG	+	Chr3:85599530-85599549	None:intergenic	45.0%
!!!	ATTTATTTATTTATTTTTTC+TGG	-	Chr3:85596040-85596059	MsG0380016603.01.T01:three_prime_UTR	5.0%
!!!	TTTATTTATTTATTTTTTCT+GGG	-	Chr3:85596041-85596060	MsG0380016603.01.T01:three_prime_UTR	5.0%
	AAAGCTGAATCCCATGGCTG+AGG	-	Chr3:85596656-85596675	MsG0380016603.01.T01:intron	50.0%
	AGGCACAAATTCCTCAGCCA+TGG	+	Chr3:85596670-85596689	None:intergenic	50.0%
	AGGTGGAGAAATCGAAACCG+AGG	-	Chr3:85596421-85596440	MsG0380016603.01.T01:intron	50.0%
	ATCAACTGTCCTTGCTGCTG+GGG	-	Chr3:85600032-85600051	MsG0380016603.01.T01:intron	50.0%
	CACAAGTTCACTGCCAACCA+AGG	+	Chr3:85599317-85599336	None:intergenic	50.0%
	CACTCTTATGTCTGGTGTGC+AGG	-	Chr3:85599950-85599969	MsG0380016603.01.T01:intron	50.0%
	CCCGGCAGTAAACTAATCTC+AGG	+	Chr3:85598508-85598527	None:intergenic	50.0%
	CCGTGTCAACTCGTATTTCC+TGG	-	Chr3:85597494-85597513	MsG0380016603.01.T01:intron	50.0%
	CGAAGAACCCATTACCGCAA+TGG	+	Chr3:85600170-85600189	None:intergenic	50.0%
	CTAACGGCCAAACTAACCGT+AGG	-	Chr3:85596787-85596806	MsG0380016603.01.T01:intron	50.0%
	CTGCACACCAGACATAAGAG+TGG	+	Chr3:85599952-85599971	None:intergenic	50.0%
	GAATCAACTGTCCTTGCTGC+TGG	-	Chr3:85600030-85600049	MsG0380016603.01.T01:intron	50.0%
	GAGATGCGGAAAAAGTGGGA+TGG	+	Chr3:85599390-85599409	None:intergenic	50.0%
	GCCAAACTAACCGTAGGGTA+TGG	-	Chr3:85596793-85596812	MsG0380016603.01.T01:intron	50.0%
	GGATGTAGTTATAGGGAGGG+AGG	+	Chr3:85598564-85598583	None:intergenic	50.0%
	GGCACAAATTCCTCAGCCAT+GGG	+	Chr3:85596669-85596688	None:intergenic	50.0%
	TACGAGGAGAAGAACGAGCA+CGG	+	Chr3:85599999-85600018	None:intergenic	50.0%
	TCACTGCCAACCAAGGTAAG+CGG	+	Chr3:85599310-85599329	None:intergenic	50.0%
	TGAGTCTCAAGCAGACAGCT+TGG	+	Chr3:85599580-85599599	None:intergenic	50.0%
	TGGAAGGCAGCACTCTCAAT+GGG	+	Chr3:85597739-85597758	None:intergenic	50.0%
	TGTCGGATTGACAGGTGCAA+TGG	+	Chr3:85597768-85597787	None:intergenic	50.0%
	TTCACATCCTGATCGGTCCT+CGG	+	Chr3:85596441-85596460	None:intergenic	50.0%
	TTGGAAGGCAGCACTCTCAA+TGG	+	Chr3:85597740-85597759	None:intergenic	50.0%
	TTGGGACGTTCTTCTCAGGA+AGG	-	Chr3:85595898-85595917	MsG0380016603.01.T01:three_prime_UTR	50.0%
!	AGGACTTTTAGTAGGCGGTG+TGG	+	Chr3:85598632-85598651	None:intergenic	50.0%
!	GACAGGTGCAATGGCAGTTT+TGG	+	Chr3:85597759-85597778	None:intergenic	50.0%
!	GTCTGTCTGGAACTATGCTG+GGG	-	Chr3:85597708-85597727	MsG0380016603.01.T01:intron	50.0%
!	TCCATCGACTGAGGCTTCTT+GGG	-	Chr3:85598335-85598354	MsG0380016603.01.T01:intron	50.0%
!!	ATTGCAGCTCTAAGCTGCAG+TGG	-	Chr3:85599830-85599849	MsG0380016603.01.T01:five_prime_UTR	50.0%
!!	TTTTGGGTGCGCTGCCTATA+AGG	-	Chr3:85599858-85599877	MsG0380016603.01.T01:intron	50.0%
!!!	GGAGTTTTTTACCAGGAGGC+AGG	+	Chr3:85599534-85599553	None:intergenic	50.0%
!!!	GGTGCAATGGCAGTTTTGGA+AGG	+	Chr3:85597755-85597774	None:intergenic	50.0%
!!!	GTTTTTTACCAGGAGGCAGG+AGG	+	Chr3:85599531-85599550	None:intergenic	50.0%
	AGGGCTGCTGTAAGTCTGTC+TGG	-	Chr3:85597695-85597714	MsG0380016603.01.T01:intron	55.0%
	ATCGAAACCGAGGACCGATC+AGG	-	Chr3:85596431-85596450	MsG0380016603.01.T01:intron	55.0%
	CAACCAAGGTAAGCGGCAGA+AGG	+	Chr3:85599303-85599322	None:intergenic	55.0%
	CTAGGTTACCGAAGAGCAGC+TGG	-	Chr3:85597130-85597149	MsG0380016603.01.T01:intron	55.0%
	GAGAGATGCCAGCTGCTCTT+CGG	+	Chr3:85597141-85597160	None:intergenic	55.0%
!	CAACCTTCTGCCGCTTACCT+TGG	-	Chr3:85599297-85599316	MsG0380016603.01.T01:intron	55.0%
!	CCATCGACTGAGGCTTCTTG+GGG	-	Chr3:85598336-85598355	MsG0380016603.01.T01:intron	55.0%
!	CTTCTGCCGCTTACCTTGGT+TGG	-	Chr3:85599301-85599320	MsG0380016603.01.T01:intron	55.0%
!	GTCCATCGACTGAGGCTTCT+TGG	-	Chr3:85598334-85598353	MsG0380016603.01.T01:intron	55.0%
!!	GCACGGACTGGTGTCTTTGA+CGG	+	Chr3:85599982-85600001	None:intergenic	55.0%
	CCCCAAGAAGCCTCAGTCGA+TGG	+	Chr3:85598339-85598358	None:intergenic	60.0%
	GCAGTCAAACCCCAGCAGCA+AGG	+	Chr3:85600044-85600063	None:intergenic	60.0%
	GCGCTGCCTATAAGGTTCGC+TGG	-	Chr3:85599866-85599885	MsG0380016603.01.T01:intron	60.0%
	GGAGAAGAACGAGCACGGAC+TGG	+	Chr3:85599994-85600013	None:intergenic	60.0%
	GGGTAACCAAACCCAGCAGC+AGG	+	Chr3:85596732-85596751	None:intergenic	60.0%
	TAGCTGCTGGACCTGCTGCT+GGG	-	Chr3:85596718-85596737	MsG0380016603.01.T01:intron	60.0%
	TTAGCTGCTGGACCTGCTGC+TGG	-	Chr3:85596717-85596736	MsG0380016603.01.T01:intron	60.0%
	GCTGGACCTGCTGCTGGGTT+TGG	-	Chr3:85596723-85596742	MsG0380016603.01.T01:intron	65.0%
	ACCAGGAGGCAGGAGGGTCC+AGG	+	Chr3:85599524-85599543	None:intergenic	70.0%
	TCCTGGACCCTCCTGCCTCC+TGG	-	Chr3:85599520-85599539	MsG0380016603.01.T01:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	85595760	85600378	85595760	ID=MsG0380016603.01;Name=MsG0380016603.01
Chr3	mRNA	85595760	85600378	85595760	ID=MsG0380016603.01.T01;Parent=MsG0380016603.01;Name=MsG0380016603.01.T01;_AED=0.40;_eAED=0.40;_QI=304\|1\|1\|1\|0.9\|0.81\|11\|352\|373
Chr3	exon	85595760	85596166	85595760	ID=MsG0380016603.01.T01:exon:33708;Parent=MsG0380016603.01.T01
Chr3	exon	85596259	85596320	85596259	ID=MsG0380016603.01.T01:exon:33707;Parent=MsG0380016603.01.T01
Chr3	exon	85597736	85597804	85597736	ID=MsG0380016603.01.T01:exon:33706;Parent=MsG0380016603.01.T01
Chr3	exon	85597987	85598034	85597987	ID=MsG0380016603.01.T01:exon:33705;Parent=MsG0380016603.01.T01
Chr3	exon	85598162	85598221	85598162	ID=MsG0380016603.01.T01:exon:33704;Parent=MsG0380016603.01.T01
Chr3	exon	85598339	85598451	85598339	ID=MsG0380016603.01.T01:exon:33703;Parent=MsG0380016603.01.T01
Chr3	exon	85598543	85598615	85598543	ID=MsG0380016603.01.T01:exon:33702;Parent=MsG0380016603.01.T01
Chr3	exon	85598960	85599004	85598960	ID=MsG0380016603.01.T01:exon:33701;Parent=MsG0380016603.01.T01
Chr3	exon	85599115	85599228	85599115	ID=MsG0380016603.01.T01:exon:33700;Parent=MsG0380016603.01.T01
Chr3	exon	85599329	85599875	85599329	ID=MsG0380016603.01.T01:exon:33699;Parent=MsG0380016603.01.T01
Chr3	exon	85600139	85600378	85600139	ID=MsG0380016603.01.T01:exon:33698;Parent=MsG0380016603.01.T01
Chr3	five_prime_UTR	85600139	85600378	85600139	ID=MsG0380016603.01.T01:five_prime_utr;Parent=MsG0380016603.01.T01
Chr3	five_prime_UTR	85599812	85599875	85599812	ID=MsG0380016603.01.T01:five_prime_utr;Parent=MsG0380016603.01.T01
Chr3	CDS	85599329	85599811	85599329	ID=MsG0380016603.01.T01:cds;Parent=MsG0380016603.01.T01
Chr3	CDS	85599115	85599228	85599115	ID=MsG0380016603.01.T01:cds;Parent=MsG0380016603.01.T01
Chr3	CDS	85598960	85599004	85598960	ID=MsG0380016603.01.T01:cds;Parent=MsG0380016603.01.T01
Chr3	CDS	85598543	85598615	85598543	ID=MsG0380016603.01.T01:cds;Parent=MsG0380016603.01.T01
Chr3	CDS	85598339	85598451	85598339	ID=MsG0380016603.01.T01:cds;Parent=MsG0380016603.01.T01
Chr3	CDS	85598162	85598221	85598162	ID=MsG0380016603.01.T01:cds;Parent=MsG0380016603.01.T01
Chr3	CDS	85597987	85598034	85597987	ID=MsG0380016603.01.T01:cds;Parent=MsG0380016603.01.T01
Chr3	CDS	85597736	85597804	85597736	ID=MsG0380016603.01.T01:cds;Parent=MsG0380016603.01.T01
Chr3	CDS	85596259	85596320	85596259	ID=MsG0380016603.01.T01:cds;Parent=MsG0380016603.01.T01
Chr3	CDS	85596112	85596166	85596112	ID=MsG0380016603.01.T01:cds;Parent=MsG0380016603.01.T01
Chr3	three_prime_UTR	85595760	85596111	85595760	ID=MsG0380016603.01.T01:three_prime_utr;Parent=MsG0380016603.01.T01

Gene Sequence

>MsG0380016603.01.T01

ATGGCTGTTGCTGAAAATGTTGGTGCCAAAATCGGTTCATCAAGTCAGAATTTGGACAACAACAACAACCACGTCGTATCATCTGACTCAACTGAGGTGGAGAAATCGAAACCGAGGACCGATCAGGATGTGAACAACAACGGTGTGTTCAACCATCAACACCAAAATGGTAATTACAGCTTCAAGACTCATCAAATGGGTCAGATGCATGTTCAGAACCAGCAGTTTATGGTGAACAATGATGGATATGTGATGAATGGTATGAGAAATGGTGAGAATGGAGGCGAGAGTTTTAAGCGTGAAATGAGGGATTTGGAAGAGTTGTTGTCAAAGCTGAATCCCATGGCTGAGGAATTTGTGCCTCCGTCGCTAACAAATAATCATGGCTACTTAGCTGCTGGACCTGCTGCTGGGTTTGGTTACCCTAACAATTTTATACTTCTTAATAATTATGCTAATGCTAACGGCCAAACTAACCGTAGGAGGAAGAATGGCTACACTACTAATGGAAAGCGAAGAGCGAATCATAAAGTGGATATGGAGAAAAGAGAAGAGATGATTAGGAGGACTGTTTACGTGTCTGATATTGATCAGCTGGTTACCGAAGAGCAGCTGGCATCTCTCTTTCTTAATTGCGGCCAGGTTGTTGATTGTCGGGTATGCGGAGATCCCAATTCTATTCTCCGATTTGCCTTCATTGAGTTTACAGATGAAGAGAGTGCAAGGGCTGCTGTAAGTCTGTCTGGAACTATGCTGGGGTATTACCCATTGAGAGTGCTGCCTTCCAAAACTGCCATTGCACCTGTCAATCCGACATTTTTACCCAGGTCTGAAGATGAAAGGGAGATGTGCTCAAGAACAATTTACTGCACAAACATTGACAAGAAGCTGACTCAAGCAGATGTGAAACACTTCTTTGAATCTATCTGTGGAGAGGTCCATCGACTGAGGCTTCTTGGGGATTACCAGCATTCAACTCGGATTGCATTTGTTGAGTTCGCAGTGGCTGAGAGTGCAATTGCAGCTCTAAGCTGCAGTGGTGTGATTTTGGGTGCGCTGCCTATAAGGGTAAGTCCGTCAAAGACACCAGTCCGTGCTCGTTCTTCTCCTCGTAGTCCATGA

Protein sequence

>MsG0380016603.01.T01

MAVAENVGAKIGSSSQNLDNNNNHVVSSDSTEVEKSKPRTDQDVNNNGVFNHQHQNGNYSFKTHQMGQMHVQNQQFMVNNDGYVMNGMRNGENGGESFKREMRDLEELLSKLNPMAEEFVPPSLTNNHGYLAAGPAAGFGYPNNFILLNNYANANGQTNRRRKNGYTTNGKRRANHKVDMEKREEMIRRTVYVSDIDQLVTEEQLASLFLNCGQVVDCRVCGDPNSILRFAFIEFTDEESARAAVSLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHSTRIAFVEFAVAESAIAALSCSGVILGALPIRVSPSKTPVRARSSPRSP*