Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035694.01.T01 | XP_003620624.1 | 98.077 | 104 | 2 | 0 | 1 | 104 | 174 | 277 | 1.08E-64 | 208 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035694.01.T01 | G7KPF3 | 98.077 | 104 | 2 | 0 | 1 | 104 | 174 | 277 | 5.14e-65 | 208 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047869.01 | MsG0680035694.01 | 0.847481 | 1.125691e-59 | 2.003581e-56 |
| MsG0080048804.01 | MsG0680035694.01 | 0.820733 | 5.868014e-53 | 4.681060e-50 |
| MsG0080048874.01 | MsG0680035694.01 | 0.826716 | 2.329065e-54 | 2.201527e-51 |
| MsG0180000470.01 | MsG0680035694.01 | 0.824980 | 6.013198e-54 | 5.410374e-51 |
| MsG0180000550.01 | MsG0680035694.01 | 0.831291 | 1.814633e-55 | 1.960473e-52 |
| MsG0180001063.01 | MsG0680035694.01 | 0.812397 | 4.328400e-51 | 2.749198e-48 |
| MsG0180001141.01 | MsG0680035694.01 | 0.801038 | 1.087301e-48 | 5.140678e-46 |
| MsG0180001663.01 | MsG0680035694.01 | 0.808162 | 3.546426e-50 | 2.013166e-47 |
| MsG0180002282.01 | MsG0680035694.01 | 0.802894 | 4.516422e-49 | 2.238264e-46 |
| MsG0180002563.01 | MsG0680035694.01 | 0.816793 | 4.605229e-52 | 3.294956e-49 |
| MsG0180002842.01 | MsG0680035694.01 | 0.807808 | 4.218591e-50 | 2.372383e-47 |
| MsG0180003669.01 | MsG0680035694.01 | 0.820178 | 7.868304e-53 | 6.181489e-50 |
| MsG0180003673.01 | MsG0680035694.01 | 0.807467 | 4.983530e-50 | 2.777973e-47 |
| MsG0180003686.01 | MsG0680035694.01 | 0.819907 | 9.077478e-53 | 7.077580e-50 |
| MsG0180003952.01 | MsG0680035694.01 | 0.810036 | 1.407434e-50 | 8.395246e-48 |
| MsG0180004264.01 | MsG0680035694.01 | 0.820201 | 7.775132e-53 | 6.111879e-50 |
| MsG0180004426.01 | MsG0680035694.01 | 0.810107 | 1.358491e-50 | 8.118307e-48 |
| MsG0180004789.01 | MsG0680035694.01 | 0.813348 | 2.678921e-51 | 1.745205e-48 |
| MsG0180005050.01 | MsG0680035694.01 | 0.832855 | 7.447713e-56 | 8.428655e-53 |
| MsG0180005371.01 | MsG0680035694.01 | 0.800609 | 1.330328e-48 | 6.221217e-46 |
| MsG0180005842.01 | MsG0680035694.01 | 0.802839 | 4.637194e-49 | 2.294982e-46 |
| MsG0180006257.01 | MsG0680035694.01 | 0.815316 | 9.838351e-52 | 6.760427e-49 |
| MsG0280006299.01 | MsG0680035694.01 | 0.823945 | 1.053760e-53 | 9.204679e-51 |
| MsG0280006356.01 | MsG0680035694.01 | 0.804974 | 1.669700e-49 | 8.729163e-47 |
| MsG0280006375.01 | MsG0680035694.01 | 0.809999 | 1.433165e-50 | 8.540587e-48 |
| MsG0280011032.01 | MsG0680035694.01 | 0.842031 | 3.314146e-58 | 4.960737e-55 |
| MsG0280011086.01 | MsG0680035694.01 | 0.802137 | 6.469792e-49 | 3.145016e-46 |
| MsG0280011446.01 | MsG0680035694.01 | 0.809296 | 2.030009e-50 | 1.187385e-47 |
| MsG0380011494.01 | MsG0680035694.01 | 0.821804 | 3.322977e-53 | 2.731509e-50 |
| MsG0380011609.01 | MsG0680035694.01 | 0.816400 | 5.640736e-52 | 3.992736e-49 |
| MsG0380012009.01 | MsG0680035694.01 | 0.828762 | 7.506777e-55 | 7.531477e-52 |
| MsG0380013834.01 | MsG0680035694.01 | 0.811182 | 7.957788e-51 | 4.892723e-48 |
| MsG0380014177.01 | MsG0680035694.01 | 0.801372 | 9.289176e-49 | 4.428827e-46 |
| MsG0380014251.01 | MsG0680035694.01 | 0.819376 | 1.199706e-52 | 9.215302e-50 |
| MsG0380014573.01 | MsG0680035694.01 | 0.851631 | 7.824137e-61 | 1.593493e-57 |
| MsG0380014770.01 | MsG0680035694.01 | 0.804547 | 2.049722e-49 | 1.059792e-46 |
| MsG0680030886.01 | MsG0680035694.01 | 0.809497 | 1.837740e-50 | 1.080670e-47 |
| MsG0680031114.01 | MsG0680035694.01 | 0.811585 | 6.505211e-51 | 4.042303e-48 |
| MsG0680031731.01 | MsG0680035694.01 | 0.806946 | 6.426792e-50 | 3.534084e-47 |
| MsG0680031946.01 | MsG0680035694.01 | 0.800774 | 1.230622e-48 | 5.779032e-46 |
| MsG0680032157.01 | MsG0680035694.01 | 0.820042 | 8.454425e-53 | 6.617021e-50 |
| MsG0680032801.01 | MsG0680035694.01 | 0.808089 | 3.675276e-50 | 2.082272e-47 |
| MsG0480018603.01 | MsG0680035694.01 | 0.806675 | 7.332604e-50 | 4.003902e-47 |
| MsG0480018659.01 | MsG0680035694.01 | 0.811854 | 5.685185e-51 | 3.557980e-48 |
| MsG0480018660.01 | MsG0680035694.01 | 0.814875 | 1.232598e-51 | 8.368395e-49 |
| MsG0480018964.01 | MsG0680035694.01 | 0.800968 | 1.123666e-48 | 5.303155e-46 |
| MsG0480019297.01 | MsG0680035694.01 | 0.800253 | 1.571681e-48 | 7.283923e-46 |
| MsG0480019329.01 | MsG0680035694.01 | 0.807975 | 3.887456e-50 | 2.195787e-47 |
| MsG0480019337.01 | MsG0680035694.01 | 0.804457 | 2.140048e-49 | 1.103960e-46 |
| MsG0480019435.01 | MsG0680035694.01 | 0.815846 | 7.499940e-52 | 5.228650e-49 |
| MsG0480020085.01 | MsG0680035694.01 | 0.804327 | 2.278687e-49 | 1.171525e-46 |
| MsG0480020090.01 | MsG0680035694.01 | 0.823613 | 1.260428e-53 | 1.090683e-50 |
| MsG0480020839.01 | MsG0680035694.01 | 0.815959 | 7.075245e-52 | 4.948133e-49 |
| MsG0480021274.01 | MsG0680035694.01 | 0.820837 | 5.554933e-53 | 4.444414e-50 |
| MsG0480021536.01 | MsG0680035694.01 | 0.810101 | 1.362937e-50 | 8.143439e-48 |
| MsG0480021558.01 | MsG0680035694.01 | 0.800989 | 1.112373e-48 | 5.252882e-46 |
| MsG0480021853.01 | MsG0680035694.01 | 0.824111 | 9.635327e-54 | 8.455034e-51 |
| MsG0480021925.01 | MsG0680035694.01 | 0.806378 | 8.466953e-50 | 4.588592e-47 |
| MsG0480021927.01 | MsG0680035694.01 | 0.800734 | 1.253961e-48 | 5.882819e-46 |
| MsG0480022222.01 | MsG0680035694.01 | 0.831881 | 1.298397e-55 | 1.427775e-52 |
| MsG0480022259.01 | MsG0680035694.01 | 0.822317 | 2.526631e-53 | 2.107567e-50 |
| MsG0480022262.01 | MsG0680035694.01 | 0.831403 | 1.702359e-55 | 1.845381e-52 |
| MsG0480022551.01 | MsG0680035694.01 | 0.822074 | 2.877991e-53 | 2.383795e-50 |
| MsG0480022707.01 | MsG0680035694.01 | 0.807044 | 6.126493e-50 | 3.377558e-47 |
| MsG0480023654.01 | MsG0680035694.01 | 0.827295 | 1.693016e-54 | 1.627712e-51 |
| MsG0480023707.01 | MsG0680035694.01 | 0.818743 | 1.671326e-52 | 1.261617e-49 |
| MsG0480024015.01 | MsG0680035694.01 | 0.808143 | 3.579379e-50 | 2.030845e-47 |
| MsG0580024472.01 | MsG0680035694.01 | 0.800145 | 1.653020e-48 | 7.639867e-46 |
| MsG0580024552.01 | MsG0680035694.01 | 0.804167 | 2.459417e-49 | 1.259291e-46 |
| MsG0580025022.01 | MsG0680035694.01 | 0.826207 | 3.078259e-54 | 2.867977e-51 |
| MsG0580025201.01 | MsG0680035694.01 | 0.804424 | 2.174888e-49 | 1.120921e-46 |
| MsG0580025448.01 | MsG0680035694.01 | 0.811051 | 8.494708e-51 | 5.204994e-48 |
| MsG0580025758.01 | MsG0680035694.01 | 0.847922 | 8.510990e-60 | 1.536257e-56 |
| MsG0380015164.01 | MsG0680035694.01 | 0.805553 | 1.262591e-49 | 6.699367e-47 |
| MsG0380015566.01 | MsG0680035694.01 | 0.863223 | 2.901504e-64 | 8.731722e-61 |
| MsG0380015720.01 | MsG0680035694.01 | 0.843711 | 1.184208e-58 | 1.868737e-55 |
| MsG0380016004.01 | MsG0680035694.01 | 0.801130 | 1.040951e-48 | 4.932972e-46 |
| MsG0380016475.01 | MsG0680035694.01 | 0.829161 | 6.010944e-55 | 6.102372e-52 |
| MsG0380016581.01 | MsG0680035694.01 | 0.823368 | 1.438657e-53 | 1.236155e-50 |
| MsG0380016603.01 | MsG0680035694.01 | 0.827718 | 1.340373e-54 | 1.304576e-51 |
| MsG0380016624.01 | MsG0680035694.01 | 0.812930 | 3.309207e-51 | 2.131396e-48 |
| MsG0380016910.01 | MsG0680035694.01 | 0.821252 | 4.456487e-53 | 3.606781e-50 |
| MsG0380017140.01 | MsG0680035694.01 | 0.824492 | 7.839406e-54 | 6.954493e-51 |
| MsG0380017326.01 | MsG0680035694.01 | 0.808650 | 2.789884e-50 | 1.603986e-47 |
| MsG0380017543.01 | MsG0680035694.01 | 0.804006 | 2.656910e-49 | 1.354830e-46 |
| MsG0380017680.01 | MsG0680035694.01 | 0.842119 | 3.141344e-58 | 4.715619e-55 |
| MsG0380018009.01 | MsG0680035694.01 | 0.809458 | 1.873980e-50 | 1.100828e-47 |
| MsG0480018163.01 | MsG0680035694.01 | 0.816347 | 5.795513e-52 | 4.096591e-49 |
| MsG0480018425.01 | MsG0680035694.01 | 0.817757 | 2.793810e-52 | 2.052546e-49 |
| MsG0580027031.01 | MsG0680035694.01 | 0.809909 | 1.499077e-50 | 8.911845e-48 |
| MsG0580027687.01 | MsG0680035694.01 | 0.811680 | 6.200946e-51 | 3.862786e-48 |
| MsG0580027688.01 | MsG0680035694.01 | 0.809830 | 1.558483e-50 | 9.246021e-48 |
| MsG0580027745.01 | MsG0680035694.01 | 0.807044 | 6.126957e-50 | 3.377765e-47 |
| MsG0580027766.01 | MsG0680035694.01 | 0.833661 | 4.690358e-56 | 5.437700e-53 |
| MsG0580027767.01 | MsG0680035694.01 | 0.839033 | 2.018180e-57 | 2.752556e-54 |
| MsG0580027833.01 | MsG0680035694.01 | 0.823271 | 1.515075e-53 | 1.298362e-50 |
| MsG0580029189.01 | MsG0680035694.01 | 0.802078 | 6.653971e-49 | 3.229665e-46 |
| MsG0580029554.01 | MsG0680035694.01 | 0.819306 | 1.244681e-52 | 9.542241e-50 |
| MsG0680030316.01 | MsG0680035694.01 | 0.839728 | 1.332206e-57 | 1.856045e-54 |
| MsG0280006661.01 | MsG0680035694.01 | 0.803287 | 3.745482e-49 | 1.874859e-46 |
| MsG0280007023.01 | MsG0680035694.01 | 0.813651 | 2.298357e-51 | 1.509625e-48 |
| MsG0280008073.01 | MsG0680035694.01 | 0.810279 | 1.247439e-50 | 7.487675e-48 |
| MsG0280008615.01 | MsG0680035694.01 | 0.830739 | 2.477886e-55 | 2.633917e-52 |
| MsG0280008648.01 | MsG0680035694.01 | 0.818000 | 2.462803e-52 | 1.821399e-49 |
| MsG0280008894.01 | MsG0680035694.01 | 0.809312 | 2.013938e-50 | 1.178465e-47 |
| MsG0280009024.01 | MsG0680035694.01 | 0.813405 | 2.602343e-51 | 1.697993e-48 |
| MsG0280010443.01 | MsG0680035694.01 | 0.844075 | 9.461910e-59 | 1.510323e-55 |
| MsG0680035694.01 | MsG0680035828.01 | 0.809955 | 1.465199e-50 | 8.721219e-48 |
| MsG0680035694.01 | MsG0680035909.01 | 0.843318 | 1.508164e-58 | 2.351062e-55 |
| MsG0680035694.01 | MsG0780036477.01 | 0.802789 | 4.749149e-49 | 2.347337e-46 |
| MsG0680035694.01 | MsG0780037919.01 | 0.810211 | 1.290322e-50 | 7.731121e-48 |
| MsG0680035694.01 | MsG0780037942.01 | 0.801481 | 8.821104e-49 | 4.217322e-46 |
| MsG0680035694.01 | MsG0780038391.01 | 0.813481 | 2.503860e-51 | 1.637121e-48 |
| MsG0680035694.01 | MsG0780038401.01 | 0.806543 | 7.817226e-50 | 4.254481e-47 |
| MsG0680035694.01 | MsG0780039144.01 | 0.810363 | 1.196212e-50 | 7.196329e-48 |
| MsG0680035694.01 | MsG0780039252.01 | 0.829860 | 4.063757e-55 | 4.211408e-52 |
| MsG0680035694.01 | MsG0780040442.01 | 0.829641 | 4.595082e-55 | 4.730969e-52 |
| MsG0680035694.01 | MsG0780040596.01 | 0.827988 | 1.154092e-54 | 1.132232e-51 |
| MsG0680035694.01 | MsG0780040704.01 | 0.803803 | 2.928575e-49 | 1.485527e-46 |
| MsG0680035694.01 | MsG0780041030.01 | 0.814994 | 1.160120e-51 | 7.902203e-49 |
| MsG0680035694.01 | MsG0780041456.01 | 0.857444 | 1.625259e-62 | 4.012155e-59 |
| MsG0680035694.01 | MsG0780041674.01 | 0.800169 | 1.634786e-48 | 7.560065e-46 |
| MsG0680035694.01 | MsG0880041836.01 | 0.863195 | 2.960476e-64 | 8.899577e-61 |
| MsG0680035694.01 | MsG0880042232.01 | 0.811903 | 5.546834e-51 | 3.475942e-48 |
| MsG0680035694.01 | MsG0880042294.01 | 0.813590 | 2.369605e-51 | 1.553887e-48 |
| MsG0680035694.01 | MsG0880042301.01 | 0.818748 | 1.667337e-52 | 1.258774e-49 |
| MsG0680035694.01 | MsG0880042314.01 | 0.800591 | 1.341093e-48 | 6.268781e-46 |
| MsG0680035694.01 | MsG0880042698.01 | 0.818756 | 1.660504e-52 | 1.253918e-49 |
| MsG0680035694.01 | MsG0880043144.01 | 0.829137 | 6.092192e-55 | 6.180168e-52 |
| MsG0680035694.01 | MsG0880043303.01 | 0.803364 | 3.611129e-49 | 1.811140e-46 |
| MsG0680035694.01 | MsG0880044415.01 | 0.803981 | 2.689152e-49 | 1.370427e-46 |
| MsG0680035694.01 | MsG0880044416.01 | 0.831863 | 1.311507e-55 | 1.441455e-52 |
| MsG0680035694.01 | MsG0880044573.01 | 0.823162 | 1.607114e-53 | 1.373027e-50 |
| MsG0680035694.01 | MsG0880044574.01 | 0.815005 | 1.153775e-51 | 7.861330e-49 |
| MsG0680035694.01 | MsG0880045372.01 | 0.817131 | 3.865625e-52 | 2.791584e-49 |
| MsG0680035694.01 | MsG0880045691.01 | 0.837720 | 4.400020e-57 | 5.765974e-54 |
| MsG0680035694.01 | MsG0880045736.01 | 0.840217 | 9.934467e-58 | 1.405509e-54 |
| MsG0680035694.01 | MsG0880045895.01 | 0.810232 | 1.276725e-50 | 7.654087e-48 |
| MsG0680035694.01 | MsG0880045896.01 | 0.800167 | 1.636523e-48 | 7.567552e-46 |
| MsG0680035694.01 | MsG0880045937.01 | 0.866211 | 3.365667e-65 | 1.125234e-61 |
| MsG0680035694.01 | MsG0880046012.01 | 0.801161 | 1.026018e-48 | 4.865923e-46 |
| MsG0680035694.01 | MsG0880046020.01 | 0.827090 | 1.895212e-54 | 1.811150e-51 |
| MsG0680035694.01 | MsG0880046479.01 | 0.814676 | 1.364364e-51 | 9.213804e-49 |
| MsG0680035694.01 | MsG0880046669.01 | 0.801589 | 8.386318e-49 | 4.020097e-46 |
| MsG0680035694.01 | MsG0880046995.01 | 0.806982 | 6.313806e-50 | 3.475259e-47 |
| MsG0680035694.01 | MsG0880047191.01 | 0.805095 | 1.575349e-49 | 8.261152e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035694.01.T01 | MTR_6g087880 | 98.077 | 104 | 2 | 0 | 1 | 104 | 174 | 277 | 1.30e-68 | 208 |
| MsG0680035694.01.T01 | MTR_2g101870 | 55.140 | 107 | 47 | 1 | 1 | 106 | 176 | 282 | 1.06e-38 | 131 |
| MsG0680035694.01.T01 | MTR_8g106580 | 46.226 | 106 | 55 | 1 | 1 | 104 | 162 | 267 | 9.52e-28 | 103 |
| MsG0680035694.01.T01 | MTR_6g081930 | 45.283 | 106 | 56 | 1 | 1 | 104 | 160 | 265 | 2.71e-26 | 99.4 |
| MsG0680035694.01.T01 | MTR_0154s0010 | 42.991 | 107 | 57 | 2 | 1 | 104 | 1 | 106 | 6.49e-24 | 89.4 |
| MsG0680035694.01.T01 | MTR_4g075730 | 40.187 | 107 | 60 | 1 | 1 | 103 | 182 | 288 | 1.12e-23 | 92.8 |
| MsG0680035694.01.T01 | MTR_8g086610 | 37.500 | 104 | 61 | 1 | 1 | 100 | 145 | 248 | 2.52e-22 | 88.6 |
| MsG0680035694.01.T01 | MTR_3g037650 | 39.048 | 105 | 60 | 2 | 1 | 104 | 142 | 243 | 7.47e-15 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680035694.01.T01 | AT3G24605 | 48.571 | 105 | 53 | 1 | 1 | 104 | 166 | 270 | 1.94e-30 | 110 |
| MsG0680035694.01.T01 | AT3G24600 | 48.077 | 104 | 54 | 0 | 1 | 104 | 171 | 274 | 2.35e-30 | 110 |
| MsG0680035694.01.T01 | AT5G42860 | 38.095 | 126 | 56 | 1 | 1 | 104 | 164 | 289 | 3.03e-23 | 91.7 |
| MsG0680035694.01.T01 | AT4G35170 | 38.182 | 110 | 65 | 1 | 1 | 107 | 164 | 273 | 2.60e-21 | 86.3 |
| MsG0680035694.01.T01 | AT1G45688 | 36.220 | 127 | 58 | 1 | 1 | 104 | 185 | 311 | 1.53e-20 | 84.7 |
Find 17 sgRNAs with CRISPR-Local
Find 39 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGATCTTACAGTTGCAAC+TGG | 0.467915 | 6:+110863116 | MsG0680035694.01.T01:CDS |
| GGAAGCAAGGTTCCATTGTA+TGG | 0.470323 | 6:+110863857 | MsG0680035694.01.T01:CDS |
| AAGTCGCGCGGAAATGTTGT+AGG | 0.496383 | 6:+110863947 | MsG0680035694.01.T01:CDS |
| GTACATTGACAGACACTGTT+CGG | 0.501903 | 6:-110863832 | None:intergenic |
| TGGTGCAGACGTAGCTAGCT+CGG | 0.520146 | 6:+110863883 | MsG0680035694.01.T01:CDS |
| CGGAAATGTTGTAGGCAAGT+TGG | 0.532289 | 6:+110863955 | MsG0680035694.01.T01:CDS |
| AAGGTTCCATTGTATGGCGC+TGG | 0.535461 | 6:+110863863 | MsG0680035694.01.T01:CDS |
| ATACATAAGATTCACCGACT+TGG | 0.574509 | 6:-110863093 | None:intergenic |
| TCTGCACCAGCGCCATACAA+TGG | 0.600404 | 6:-110863869 | None:intergenic |
| GTCTTTGAAGTTAAGTCGCG+CGG | 0.601720 | 6:+110863935 | MsG0680035694.01.T01:CDS |
| ATGTTGTAGGCAAGTTGGTG+AGG | 0.621904 | 6:+110863960 | MsG0680035694.01.T01:CDS |
| CATTTATGTCAGCTCCAAGT+CGG | 0.623350 | 6:+110863079 | MsG0680035694.01.T01:CDS |
| TGTCAATGTACAAGGAAGCA+AGG | 0.623368 | 6:+110863844 | MsG0680035694.01.T01:CDS |
| ACAGTGTCTGTCAATGTACA+AGG | 0.628282 | 6:+110863836 | MsG0680035694.01.T01:CDS |
| TCTTACAGTTGCAACTGGTG+AGG | 0.650775 | 6:+110863121 | MsG0680035694.01.T01:CDS |
| GTAGCTAGCTCGGTGAACAA+CGG | 0.660567 | 6:+110863893 | MsG0680035694.01.T01:CDS |
| TGAGCAAGAGACACGCTGTG+TGG | 0.698027 | 6:-110863989 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATAACTTACAGATGTTT+AGG | - | Chr6:110863617-110863636 | None:intergenic | 20.0% |
| !!! | TAATTAAAAACTAGTCTGTT+TGG | + | Chr6:110863212-110863231 | MsG0680035694.01.T01:intron | 20.0% |
| !!! | TGAGGTAAGTATTCTAAAAT+CGG | + | Chr6:110863139-110863158 | MsG0680035694.01.T01:intron | 25.0% |
| AGTCAAAGTGAGTTCAAAAT+TGG | + | Chr6:110863691-110863710 | MsG0680035694.01.T01:intron | 30.0% | |
| ATAAGCACTTGGAAATTGTT+TGG | + | Chr6:110863263-110863282 | MsG0680035694.01.T01:intron | 30.0% | |
| GTTTCTAAATCAACAAGTAC+TGG | - | Chr6:110863165-110863184 | None:intergenic | 30.0% | |
| TAAGCACTTGGAAATTGTTT+GGG | + | Chr6:110863264-110863283 | MsG0680035694.01.T01:intron | 30.0% | |
| ! | TTGAACTCACTTTGACTTAT+GGG | - | Chr6:110863688-110863707 | None:intergenic | 30.0% |
| ! | TTTGAACTCACTTTGACTTA+TGG | - | Chr6:110863689-110863708 | None:intergenic | 30.0% |
| AAATGCCGAAAAAAGTTGCA+GGG | - | Chr6:110863064-110863083 | None:intergenic | 35.0% | |
| ATGGAACTTGACAGTAAGAA+TGG | - | Chr6:110863770-110863789 | None:intergenic | 35.0% | |
| CAATTTCCAAGTGCTTATGT+CGG | - | Chr6:110863261-110863280 | None:intergenic | 35.0% | |
| TAAATGCCGAAAAAAGTTGC+AGG | - | Chr6:110863065-110863084 | None:intergenic | 35.0% | |
| ! | ATACATAAGATTCACCGACT+TGG | - | Chr6:110863096-110863115 | None:intergenic | 35.0% |
| !! | AGTTCAAAATTGGCCTTTGA+AGG | + | Chr6:110863701-110863720 | MsG0680035694.01.T01:intron | 35.0% |
| !! | CTATTTTTCATAAGCTGTCC+TGG | - | Chr6:110863312-110863331 | None:intergenic | 35.0% |
| !!! | CAGAGCTAGAACTTTTTTGA+TGG | + | Chr6:110863454-110863473 | MsG0680035694.01.T01:intron | 35.0% |
| !!! | CATAACCCTGCAACTTTTTT+CGG | + | Chr6:110863056-110863075 | MsG0680035694.01.T01:CDS | 35.0% |
| ACAGTGTCTGTCAATGTACA+AGG | + | Chr6:110863836-110863855 | MsG0680035694.01.T01:CDS | 40.0% | |
| CATTTAAGCCACTCCTTCAA+AGG | - | Chr6:110863717-110863736 | None:intergenic | 40.0% | |
| CATTTATGTCAGCTCCAAGT+CGG | + | Chr6:110863079-110863098 | MsG0680035694.01.T01:CDS | 40.0% | |
| GTACATTGACAGACACTGTT+CGG | - | Chr6:110863835-110863854 | None:intergenic | 40.0% | |
| TATCTACCGACATAAGCACT+TGG | + | Chr6:110863252-110863271 | MsG0680035694.01.T01:intron | 40.0% | |
| TCTGATCTTACAGTTGCAAC+TGG | + | Chr6:110863116-110863135 | MsG0680035694.01.T01:CDS | 40.0% | |
| TGTCAATGTACAAGGAAGCA+AGG | + | Chr6:110863844-110863863 | MsG0680035694.01.T01:CDS | 40.0% | |
| TTTCTTCAACTGCAGCAACA+TGG | - | Chr6:110863789-110863808 | None:intergenic | 40.0% | |
| !! | AAAATTGGCCTTTGAAGGAG+TGG | + | Chr6:110863706-110863725 | MsG0680035694.01.T01:intron | 40.0% |
| CGGAAATGTTGTAGGCAAGT+TGG | + | Chr6:110863955-110863974 | MsG0680035694.01.T01:CDS | 45.0% | |
| CTTATGTCTGTAAGCTCACC+AGG | + | Chr6:110863291-110863310 | MsG0680035694.01.T01:intron | 45.0% | |
| GGAAGCAAGGTTCCATTGTA+TGG | + | Chr6:110863857-110863876 | MsG0680035694.01.T01:CDS | 45.0% | |
| TCTTACAGTTGCAACTGGTG+AGG | + | Chr6:110863121-110863140 | MsG0680035694.01.T01:CDS | 45.0% | |
| !! | ATGTTGTAGGCAAGTTGGTG+AGG | + | Chr6:110863960-110863979 | MsG0680035694.01.T01:CDS | 45.0% |
| !! | GTCTTTGAAGTTAAGTCGCG+CGG | + | Chr6:110863935-110863954 | MsG0680035694.01.T01:CDS | 45.0% |
| AAGGTTCCATTGTATGGCGC+TGG | + | Chr6:110863863-110863882 | MsG0680035694.01.T01:CDS | 50.0% | |
| AAGTCGCGCGGAAATGTTGT+AGG | + | Chr6:110863947-110863966 | MsG0680035694.01.T01:CDS | 50.0% | |
| ! | GTAGCTAGCTCGGTGAACAA+CGG | + | Chr6:110863893-110863912 | MsG0680035694.01.T01:CDS | 50.0% |
| TCTGCACCAGCGCCATACAA+TGG | - | Chr6:110863872-110863891 | None:intergenic | 55.0% | |
| TGAGCAAGAGACACGCTGTG+TGG | - | Chr6:110863992-110864011 | None:intergenic | 55.0% | |
| TGGTGCAGACGTAGCTAGCT+CGG | + | Chr6:110863883-110863902 | MsG0680035694.01.T01:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 110863020 | 110864015 | 110863020 | ID=MsG0680035694.01;Name=MsG0680035694.01 |
| Chr6 | mRNA | 110863020 | 110864015 | 110863020 | ID=MsG0680035694.01.T01;Parent=MsG0680035694.01;Name=MsG0680035694.01.T01;_AED=0.30;_eAED=0.31;_QI=0|0|0|1|0|0|2|0|112 |
| Chr6 | exon | 110863020 | 110863142 | 110863020 | ID=MsG0680035694.01.T01:exon:9002;Parent=MsG0680035694.01.T01 |
| Chr6 | exon | 110863800 | 110864015 | 110863800 | ID=MsG0680035694.01.T01:exon:9003;Parent=MsG0680035694.01.T01 |
| Chr6 | CDS | 110863020 | 110863142 | 110863020 | ID=MsG0680035694.01.T01:cds;Parent=MsG0680035694.01.T01 |
| Chr6 | CDS | 110863800 | 110864015 | 110863800 | ID=MsG0680035694.01.T01:cds;Parent=MsG0680035694.01.T01 |
| Gene Sequence |
| Protein sequence |
