AlfalfaGEDB | MsG0480021336.01

M. sativa cultivar ZhongmuNo.1 / MsG0480021336.01

KEGG: K14488
GO: GO:0009733
PFAM: PF02519

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480021336.01.T01	XP_003607107.1	97.849	93	2	0	1	93	1	93	6.20E-61	190

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480021336.01.T01	P33083	78.022	91	19	1	1	91	1	90	1.24E-46	147

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480021336.01.T01	G7JL29	97.849	93	2	0	1	93	1	93	2.96e-61	190

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048727.01	MsG0480021336.01	0.809919	1.491030e-50	8.866580e-48
MsG0080048773.01	MsG0480021336.01	0.801774	7.683778e-49	3.700688e-46
MsG0080049040.01	MsG0480021336.01	0.803863	2.845463e-49	1.445669e-46
MsG0080049063.01	MsG0480021336.01	0.808525	2.968033e-50	1.700939e-47
MsG0080049068.01	MsG0480021336.01	0.809143	2.189341e-50	1.275372e-47
MsG0180000129.01	MsG0480021336.01	0.811210	7.847384e-51	4.828446e-48
MsG0180000670.01	MsG0480021336.01	0.813808	2.122418e-51	1.400030e-48
MsG0180001085.01	MsG0480021336.01	0.830740	2.476803e-55	2.632824e-52
MsG0180001175.01	MsG0480021336.01	0.805624	1.220260e-49	6.486751e-47
MsG0180001270.01	MsG0480021336.01	0.812341	4.450668e-51	2.822572e-48
MsG0180001371.01	MsG0480021336.01	0.807275	5.473437e-50	3.035781e-47
MsG0180003906.01	MsG0480021336.01	0.824327	8.572315e-54	7.568534e-51
MsG0180004103.01	MsG0480021336.01	0.807587	4.699711e-50	2.627655e-47
MsG0180004733.01	MsG0480021336.01	0.800884	1.169006e-48	5.505366e-46
MsG0180004735.01	MsG0480021336.01	0.807928	3.977158e-50	2.243588e-47
MsG0180004934.01	MsG0480021336.01	0.801894	7.259145e-49	3.507097e-46
MsG0180005485.01	MsG0480021336.01	0.802528	5.375229e-49	2.639027e-46
MsG0180005568.01	MsG0480021336.01	0.810877	9.265558e-51	5.651252e-48
MsG0180005612.01	MsG0480021336.01	0.813779	2.153325e-51	1.419244e-48
MsG0180005807.01	MsG0480021336.01	0.803821	2.903053e-49	1.473305e-46
MsG0280010975.01	MsG0480021336.01	0.833908	4.070006e-56	4.754243e-53
MsG0380012270.01	MsG0480021336.01	0.810807	9.591648e-51	5.839014e-48
MsG0380013472.01	MsG0480021336.01	0.802519	5.397612e-49	2.649386e-46
MsG0380013499.01	MsG0480021336.01	0.818898	1.541517e-52	1.168711e-49
MsG0380014386.01	MsG0480021336.01	0.812311	4.519718e-51	2.863931e-48
MsG0380014906.01	MsG0480021336.01	0.830958	2.189650e-55	2.342553e-52
MsG0380014909.01	MsG0480021336.01	0.832193	1.086769e-55	1.205869e-52
MsG0480019501.01	MsG0480021336.01	0.836659	8.220387e-57	1.042736e-53
MsG0480019971.01	MsG0480021336.01	0.835236	1.887589e-56	2.294434e-53
MsG0480020229.01	MsG0480021336.01	0.803240	3.831241e-49	1.915477e-46
MsG0480020753.01	MsG0480021336.01	0.809525	1.812304e-50	1.066525e-47
MsG0480020890.01	MsG0480021336.01	0.806761	7.029065e-50	3.846858e-47
MsG0480021168.01	MsG0480021336.01	0.801241	9.878290e-49	4.694329e-46
MsG0480021336.01	MsG0480021337.01	0.833656	4.704756e-56	5.453443e-53
MsG0480021336.01	MsG0480021367.01	0.824871	6.383411e-54	5.725392e-51
MsG0480021336.01	MsG0480021377.01	0.837130	6.231508e-57	8.018136e-54
MsG0480021336.01	MsG0480021381.01	0.836038	1.182757e-56	1.472617e-53
MsG0480021336.01	MsG0480021783.01	0.803920	2.768956e-49	1.408893e-46
MsG0480021336.01	MsG0480022537.01	0.802490	5.473076e-49	2.684478e-46
MsG0480021336.01	MsG0480023216.01	0.825703	4.055904e-54	3.725035e-51
MsG0480021336.01	MsG0480023422.01	0.811587	6.497127e-51	4.037501e-48
MsG0480021336.01	MsG0480023661.01	0.822593	2.180252e-53	1.833159e-50
MsG0480021336.01	MsG0480023845.01	0.800855	1.184800e-48	5.575639e-46
MsG0480021336.01	MsG0480023990.01	0.809270	2.055706e-50	1.201591e-47
MsG0480021336.01	MsG0480023991.01	0.823686	1.212062e-53	1.051092e-50
MsG0480021336.01	MsG0480023992.01	0.830288	3.195909e-55	3.352483e-52
MsG0480021336.01	MsG0580024759.01	0.856778	2.556290e-62	6.169234e-59
MsG0480021336.01	MsG0580025589.01	0.816130	6.479343e-52	4.552660e-49
MsG0480021336.01	MsG0580027394.01	0.819417	1.174114e-52	9.029915e-50
MsG0480021336.01	MsG0580028024.01	0.809724	1.642914e-50	9.719814e-48
MsG0480021336.01	MsG0580029414.01	0.818173	2.250858e-52	1.672565e-49
MsG0480021336.01	MsG0680030680.01	0.833470	5.236193e-56	6.035828e-53
MsG0480021336.01	MsG0680030858.01	0.825451	4.654762e-54	4.244009e-51
MsG0480021336.01	MsG0680030957.01	0.831165	1.947821e-55	2.096625e-52
MsG0480021336.01	MsG0680031146.01	0.804627	1.972760e-49	1.022104e-46
MsG0480021336.01	MsG0680032515.01	0.810299	1.235216e-50	7.418099e-48
MsG0480021336.01	MsG0680032520.01	0.818887	1.550175e-52	1.174911e-49
MsG0480021336.01	MsG0680033377.01	0.808525	2.968044e-50	1.700944e-47
MsG0480021336.01	MsG0680035731.01	0.815460	9.141427e-52	6.306632e-49
MsG0480021336.01	MsG0680035791.01	0.805519	1.283551e-49	6.804617e-47
MsG0480021336.01	MsG0780037638.01	0.819054	1.420459e-52	1.081535e-49
MsG0480021336.01	MsG0780038784.01	0.805756	1.144790e-49	6.106612e-47
MsG0480021336.01	MsG0780039186.01	0.817763	2.785990e-52	2.047099e-49
MsG0480021336.01	MsG0780039675.01	0.811618	6.398322e-51	3.979233e-48
MsG0480021336.01	MsG0780039975.01	0.836666	8.188550e-57	1.038927e-53
MsG0480021336.01	MsG0780040343.01	0.821164	4.670425e-53	3.770856e-50
MsG0480021336.01	MsG0780041262.01	0.806683	7.301119e-50	3.987651e-47
MsG0480021336.01	MsG0780041302.01	0.807805	4.225012e-50	2.375827e-47
MsG0480021336.01	MsG0880043249.01	0.834505	2.883678e-56	3.429210e-53
MsG0480021336.01	MsG0880044392.01	0.805463	1.318700e-49	6.981377e-47
MsG0480021336.01	MsG0880044487.01	0.831193	1.918223e-55	2.066448e-52
MsG0480021336.01	MsG0880045668.01	0.801824	7.504750e-49	3.619184e-46
MsG0480021336.01	MsG0880045710.01	0.810731	9.963012e-51	6.052949e-48
MsG0480021336.01	MsG0880046764.01	0.822983	1.769121e-53	1.503872e-50
MsG0480021336.01	MsG0880046765.01	0.805704	1.174088e-49	6.254621e-47
MsG0480021336.01	MsG0880046791.01	0.827870	1.232075e-54	1.204513e-51
MsG0480021336.01	MsG0880047160.01	0.820842	5.537970e-53	4.431536e-50
MsG0480021336.01	MsG0880047770.01	0.805942	1.046375e-49	5.608181e-47
MsG0380015603.01	MsG0480021336.01	0.826567	2.527121e-54	2.378643e-51
MsG0380015754.01	MsG0480021336.01	0.801108	1.052143e-48	4.983192e-46
MsG0380015896.01	MsG0480021336.01	0.816829	4.518887e-52	3.236429e-49
MsG0380016137.01	MsG0480021336.01	0.804145	2.486292e-49	1.272326e-46
MsG0380016459.01	MsG0480021336.01	0.804352	2.251234e-49	1.158180e-46
MsG0380017423.01	MsG0480021336.01	0.809947	1.470745e-50	8.752289e-48
MsG0380018037.01	MsG0480021336.01	0.842287	2.835671e-58	4.279105e-55
MsG0380018061.01	MsG0480021336.01	0.803302	3.720255e-49	1.862895e-46
MsG0380018069.01	MsG0480021336.01	0.811476	6.870813e-51	4.257372e-48
MsG0280006718.01	MsG0480021336.01	0.804468	2.128860e-49	1.098492e-46
MsG0280006848.01	MsG0480021336.01	0.813800	2.130773e-51	1.405210e-48
MsG0280008709.01	MsG0480021336.01	0.813868	2.057994e-51	1.359729e-48
MsG0280008942.01	MsG0480021336.01	0.811265	7.634114e-51	4.703953e-48
MsG0280009691.01	MsG0480021336.01	0.808393	3.166934e-50	1.808693e-47
MsG0280009756.01	MsG0480021336.01	0.818268	2.141604e-52	1.595517e-49
MsG0280009953.01	MsG0480021336.01	0.802264	6.092767e-49	2.971334e-46
MsG0280009960.01	MsG0480021336.01	0.810497	1.119099e-50	6.756367e-48
MsG0280010353.01	MsG0480021336.01	0.829142	6.074080e-55	6.162656e-52
MsG0280010376.01	MsG0480021336.01	0.804153	2.476317e-49	1.267493e-46

PPI

Gene1	Gene2	Type
MsG0480021386.01	MsG0480021336.01	PPI
MsG0480021336.01	MsG0480021386.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480021336.01.T01	MTR_4g072310	97.849	93	2	0	1	93	1	93	7.50e-65	190
MsG0480021336.01.T01	MTR_4g072880	84.946	93	14	0	1	93	1	93	7.61e-57	170
MsG0480021336.01.T01	MTR_4g072270	87.097	93	12	0	1	93	1	93	1.00e-56	170
MsG0480021336.01.T01	MTR_4g072230	83.871	93	13	1	1	93	1	91	5.31e-54	163
MsG0480021336.01.T01	MTR_4g072250	83.871	93	14	1	1	93	1	92	4.36e-53	160
MsG0480021336.01.T01	MTR_4g072860	81.720	93	17	0	1	93	1	93	8.30e-53	160
MsG0480021336.01.T01	MTR_4g072500	75.269	93	22	1	1	93	1	92	1.09e-48	149
MsG0480021336.01.T01	MTR_3g084240	73.118	93	24	1	1	93	1	92	3.11e-47	145
MsG0480021336.01.T01	MTR_4g072240	71.429	91	26	0	1	91	1	91	6.08e-47	145
MsG0480021336.01.T01	MTR_4g072640	75.824	91	21	1	1	91	1	90	8.34e-47	145
MsG0480021336.01.T01	MTR_4g072530	74.725	91	22	1	1	91	1	90	1.45e-46	144
MsG0480021336.01.T01	MTR_3g084170	73.118	93	24	1	1	93	1	92	1.51e-46	144
MsG0480021336.01.T01	MTR_4g072480	73.118	93	24	1	1	93	1	92	1.61e-46	144
MsG0480021336.01.T01	MTR_3g084150	72.043	93	25	1	1	93	1	92	1.66e-46	144
MsG0480021336.01.T01	MTR_4g072620	73.118	93	24	1	1	93	1	92	2.55e-46	143
MsG0480021336.01.T01	MTR_4g072570	74.194	93	23	1	1	93	1	92	5.21e-46	142
MsG0480021336.01.T01	MTR_4g072680	73.118	93	24	1	1	93	1	92	5.39e-46	142
MsG0480021336.01.T01	MTR_8g461410	69.892	93	27	1	1	93	1	92	8.08e-46	142
MsG0480021336.01.T01	MTR_4g072460	73.118	93	24	1	1	93	1	92	1.11e-45	142
MsG0480021336.01.T01	MTR_4g072370	74.725	91	20	1	1	91	1	88	1.45e-45	141
MsG0480021336.01.T01	MTR_3g084180	70.968	93	26	1	1	93	1	92	1.56e-45	141
MsG0480021336.01.T01	MTR_3g117630	73.333	90	24	0	4	93	3	92	2.32e-45	141
MsG0480021336.01.T01	MTR_4g072220	67.742	93	30	0	1	93	1	93	3.83e-45	140
MsG0480021336.01.T01	MTR_4g072870	69.231	91	28	0	1	91	1	91	4.02e-45	140
MsG0480021336.01.T01	MTR_4g072850	75.532	94	22	1	1	93	1	94	6.05e-45	140
MsG0480021336.01.T01	MTR_4g050700	68.817	93	29	0	1	93	1	93	9.72e-45	139
MsG0480021336.01.T01	MTR_2g012410	68.817	93	29	0	1	93	1	93	9.72e-45	139
MsG0480021336.01.T01	MTR_4g072730	70.652	92	26	1	1	92	1	91	2.37e-44	139
MsG0480021336.01.T01	MTR_4g072300	67.033	91	30	0	1	91	1	91	2.80e-44	138
MsG0480021336.01.T01	MTR_3g084220	69.892	93	27	1	1	93	1	92	3.84e-44	138
MsG0480021336.01.T01	MTR_3g110038	69.892	93	27	1	1	93	1	92	4.34e-44	138
MsG0480021336.01.T01	MTR_3g110032	67.742	93	30	0	1	93	1	93	5.33e-44	137
MsG0480021336.01.T01	MTR_4g072890	67.033	91	30	0	1	91	1	91	8.32e-43	134
MsG0480021336.01.T01	MTR_4g072260	65.591	93	32	0	1	93	1	93	8.54e-43	134
MsG0480021336.01.T01	MTR_3g084250	68.817	93	28	1	1	93	1	92	1.53e-42	134
MsG0480021336.01.T01	MTR_3g084260	66.667	93	31	0	1	93	1	93	3.63e-42	133
MsG0480021336.01.T01	MTR_4g072580	71.429	91	20	1	1	91	1	85	5.04e-42	132
MsG0480021336.01.T01	MTR_5g008360	78.947	76	16	0	18	93	8	83	5.58e-42	132
MsG0480021336.01.T01	MTR_4g072740	71.429	91	20	1	1	91	1	85	7.79e-42	132
MsG0480021336.01.T01	MTR_4g072330	67.033	91	27	1	1	91	1	88	1.46e-41	131
MsG0480021336.01.T01	MTR_3g110042	70.000	90	26	1	1	90	1	89	1.52e-41	131
MsG0480021336.01.T01	MTR_4g072830	71.111	90	23	1	1	90	1	87	3.15e-41	130
MsG0480021336.01.T01	MTR_4g072490	69.231	91	22	1	1	91	1	85	4.04e-41	130
MsG0480021336.01.T01	MTR_4g072290	67.742	93	16	1	1	93	1	79	9.31e-41	129
MsG0480021336.01.T01	MTR_4g072660	65.591	93	26	1	1	93	1	87	2.89e-40	128
MsG0480021336.01.T01	MTR_5g008370	88.406	69	8	0	24	92	23	91	2.97e-40	130
MsG0480021336.01.T01	MTR_4g072940	70.652	92	26	1	3	93	33	124	3.18e-40	129
MsG0480021336.01.T01	MTR_4g072470	70.330	91	21	1	1	91	1	85	5.44e-40	127
MsG0480021336.01.T01	MTR_4g072610	70.330	91	20	1	1	91	1	84	2.75e-39	125
MsG0480021336.01.T01	MTR_3g084210	68.817	93	28	1	1	93	1	92	5.79e-38	122
MsG0480021336.01.T01	MTR_4g072630	64.835	91	27	1	1	91	1	86	5.92e-38	122
MsG0480021336.01.T01	MTR_4g072820	68.478	92	21	2	1	91	1	85	9.28e-38	122
MsG0480021336.01.T01	MTR_3g084190	68.817	93	28	1	1	93	1	92	1.26e-37	121
MsG0480021336.01.T01	MTR_4g072600	65.934	91	25	1	1	91	1	85	1.67e-37	121
MsG0480021336.01.T01	MTR_4g072465	64.835	91	27	1	1	91	1	86	1.96e-37	121
MsG0480021336.01.T01	MTR_8g461420	69.231	91	27	1	1	91	1	90	6.18e-37	120
MsG0480021336.01.T01	MTR_4g072650	65.934	91	24	1	1	91	1	84	1.00e-36	119
MsG0480021336.01.T01	MTR_4g072540	78.571	70	15	0	22	91	17	86	1.06e-36	119
MsG0480021336.01.T01	MTR_3g084230	69.231	91	27	1	1	91	1	90	1.91e-36	119
MsG0480021336.01.T01	MTR_4g072550	72.603	73	20	0	21	93	31	103	3.22e-36	118
MsG0480021336.01.T01	MTR_4g072380	67.391	92	23	2	1	91	1	86	3.56e-36	118
MsG0480021336.01.T01	MTR_4g072720	77.143	70	16	0	22	91	17	86	5.86e-36	117
MsG0480021336.01.T01	MTR_4g072670	78.571	70	15	0	22	91	17	86	6.06e-36	117
MsG0480021336.01.T01	MTR_4g072590	80.882	68	13	0	24	91	18	85	7.83e-36	117
MsG0480021336.01.T01	MTR_3g084160	65.591	93	31	1	1	93	1	92	8.78e-36	117
MsG0480021336.01.T01	MTR_3g110045	72.941	85	23	0	9	93	67	151	1.06e-35	119
MsG0480021336.01.T01	MTR_4g072510	74.286	70	18	0	22	91	17	86	8.41e-34	112
MsG0480021336.01.T01	MTR_4g072910	58.511	94	33	1	4	91	7	100	7.74e-33	110
MsG0480021336.01.T01	MTR_5g008350	66.250	80	21	1	1	80	1	74	2.38e-32	108
MsG0480021336.01.T01	MTR_4g072980	57.292	96	37	3	1	93	1	95	7.57e-32	107
MsG0480021336.01.T01	MTR_4g072560	60.714	84	25	2	9	91	22	98	1.48e-31	106
MsG0480021336.01.T01	MTR_4g072690	73.529	68	18	0	24	91	18	85	1.68e-31	106
MsG0480021336.01.T01	MTR_4g072450	73.529	68	18	0	24	91	18	85	4.09e-31	105
MsG0480021336.01.T01	MTR_3g084200	67.123	73	23	1	1	73	1	72	5.84e-31	105
MsG0480021336.01.T01	MTR_4g072770	71.212	66	19	0	26	91	15	80	2.20e-30	103
MsG0480021336.01.T01	MTR_3g117640	66.667	69	22	1	25	92	33	101	5.44e-30	102
MsG0480021336.01.T01	MTR_3g110035	61.538	78	29	1	16	93	62	138	1.16e-29	103
MsG0480021336.01.T01	MTR_4g072750	66.667	75	22	2	1	73	1	74	1.53e-28	98.6
MsG0480021336.01.T01	MTR_4g072280	57.333	75	32	0	1	75	1	75	5.41e-27	94.7
MsG0480021336.01.T01	MTR_3g113310	61.194	67	25	1	24	90	40	105	1.57e-26	94.4
MsG0480021336.01.T01	MTR_3g117610	64.615	65	22	1	24	88	43	106	1.27e-25	92.0
MsG0480021336.01.T01	MTR_6g077850	47.727	88	45	1	4	91	13	99	2.51e-25	90.9
MsG0480021336.01.T01	MTR_4g072190	62.687	67	24	1	24	90	34	99	2.54e-25	90.9
MsG0480021336.01.T01	MTR_8g461400	50.538	93	19	2	1	93	1	66	6.81e-24	86.3
MsG0480021336.01.T01	MTR_5g021820	57.576	66	27	1	25	90	39	103	2.45e-22	83.6
MsG0480021336.01.T01	MTR_8g076040	59.375	64	25	1	25	88	40	102	4.53e-22	82.8
MsG0480021336.01.T01	MTR_4g072930	55.072	69	27	1	27	91	42	110	7.58e-22	82.4
MsG0480021336.01.T01	MTR_4g072840	48.913	92	14	3	1	91	1	60	7.18e-19	73.6
MsG0480021336.01.T01	MTR_2g043960	53.226	62	28	1	25	86	75	135	9.04e-17	70.9
MsG0480021336.01.T01	MTR_4g124750	51.562	64	30	1	25	88	68	130	1.49e-16	70.1
MsG0480021336.01.T01	MTR_4g005310	49.296	71	32	2	17	86	56	123	4.13e-16	68.9
MsG0480021336.01.T01	MTR_1g024085	50.725	69	30	2	16	84	30	94	9.26e-16	67.8
MsG0480021336.01.T01	MTR_7g118010	40.741	81	45	2	13	91	10	89	1.15e-15	66.6
MsG0480021336.01.T01	MTR_4g025830	42.683	82	40	3	12	90	68	145	1.31e-15	67.8
MsG0480021336.01.T01	MTR_3g092220	45.714	70	35	2	17	84	24	92	3.84e-15	65.5
MsG0480021336.01.T01	MTR_1g094750	50.000	62	30	1	25	86	49	109	5.11e-15	65.1
MsG0480021336.01.T01	MTR_1g061570	47.059	68	35	1	25	92	18	84	8.90e-15	64.7
MsG0480021336.01.T01	MTR_1g009150	51.613	62	29	1	25	86	70	130	1.12e-14	65.9
MsG0480021336.01.T01	MTR_0388s0020	38.372	86	48	3	8	90	58	141	1.48e-14	64.7
MsG0480021336.01.T01	MTR_1g063950	47.761	67	34	1	17	83	39	104	2.53e-14	63.5
MsG0480021336.01.T01	MTR_8g026730	41.096	73	40	2	21	91	22	93	3.66e-14	62.8
MsG0480021336.01.T01	MTR_8g461210	41.758	91	49	3	4	92	14	102	6.11e-14	62.4
MsG0480021336.01.T01	MTR_3g105900	65.116	43	15	0	23	65	1169	1211	7.19e-14	65.9
MsG0480021336.01.T01	MTR_4g005320	47.541	61	31	1	26	86	70	129	1.93e-13	62.4
MsG0480021336.01.T01	MTR_4g072160	48.387	62	31	1	25	86	36	96	2.63e-13	61.2
MsG0480021336.01.T01	MTR_2g095430	40.964	83	42	3	10	86	27	108	4.57e-13	60.5
MsG0480021336.01.T01	MTR_3g109160	47.761	67	34	1	26	92	69	134	5.12e-13	61.2
MsG0480021336.01.T01	MTR_7g101740	48.438	64	32	1	25	88	39	101	5.18e-13	60.1
MsG0480021336.01.T01	MTR_1g059770	40.000	65	38	1	26	90	49	112	7.42e-13	60.1
MsG0480021336.01.T01	MTR_3g098970	32.099	81	53	2	13	93	41	119	3.67e-11	56.2
MsG0480021336.01.T01	MTR_7g104940	38.710	62	37	1	29	90	53	113	5.26e-11	55.1
MsG0480021336.01.T01	MTR_8g101520	43.077	65	36	1	27	91	51	114	5.49e-11	55.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0480021336.01.T01	AT5G18060	69.737	76	22	1	17	91	15	90	2.54e-34	113
MsG0480021336.01.T01	AT4G38840	63.529	85	30	1	8	91	15	99	4.33e-34	113
MsG0480021336.01.T01	AT5G18020	68.421	76	23	1	17	91	15	90	1.59e-33	111
MsG0480021336.01.T01	AT5G18050	67.105	76	24	1	17	91	15	90	1.85e-33	111
MsG0480021336.01.T01	AT5G18080	68.421	76	23	1	17	91	15	90	2.08e-33	111
MsG0480021336.01.T01	AT5G18030	68.919	74	22	1	19	91	15	88	4.14e-32	107
MsG0480021336.01.T01	AT5G18010	65.789	76	25	1	17	91	15	90	7.83e-32	107
MsG0480021336.01.T01	AT2G21200	69.014	71	21	1	21	90	16	86	1.47e-31	106
MsG0480021336.01.T01	AT3G03840	67.123	73	22	1	22	92	23	95	4.47e-31	105
MsG0480021336.01.T01	AT4G38825	57.955	88	34	2	5	91	4	89	2.37e-30	103
MsG0480021336.01.T01	AT3G03850	70.588	68	18	1	27	92	26	93	2.60e-30	103
MsG0480021336.01.T01	AT2G21210	49.474	95	44	2	1	91	1	95	9.37e-30	102
MsG0480021336.01.T01	AT4G34770	61.176	85	28	2	10	92	22	103	1.04e-29	102
MsG0480021336.01.T01	AT4G38850	65.714	70	21	1	25	91	20	89	3.05e-29	100
MsG0480021336.01.T01	AT3G03820	54.255	94	37	2	2	92	6	96	4.28e-29	100
MsG0480021336.01.T01	AT2G21210	49.474	95	44	2	1	91	68	162	6.92e-29	102
MsG0480021336.01.T01	AT3G03830	60.526	76	27	1	19	91	17	92	1.19e-27	96.7
MsG0480021336.01.T01	AT4G34810	60.000	80	26	3	17	90	38	117	4.65e-27	95.9
MsG0480021336.01.T01	AT4G34800	53.488	86	32	2	1	83	1	81	5.16e-27	95.1
MsG0480021336.01.T01	AT4G38860	60.294	68	27	0	24	91	38	105	3.71e-25	90.9
MsG0480021336.01.T01	AT4G13790	56.522	69	28	1	24	90	23	91	5.76e-25	89.7
MsG0480021336.01.T01	AT2G21220	61.194	67	25	1	24	90	38	103	8.76e-25	89.7
MsG0480021336.01.T01	AT4G34760	61.194	67	25	1	24	90	41	106	1.54e-24	89.4
MsG0480021336.01.T01	AT1G75580	62.687	67	24	1	24	90	42	107	1.99e-24	89.0
MsG0480021336.01.T01	AT4G34780	48.387	93	42	2	4	90	3	95	1.09e-23	87.0
MsG0480021336.01.T01	AT4G34790	56.923	65	26	1	26	88	39	103	4.32e-22	83.2
MsG0480021336.01.T01	AT4G36110	54.167	72	32	1	17	88	31	101	1.30e-21	81.6
MsG0480021336.01.T01	AT1G19830	56.716	67	28	1	24	90	46	111	3.24e-21	81.3
MsG0480021336.01.T01	AT2G16580	58.462	65	26	1	24	88	42	105	4.04e-21	80.5
MsG0480021336.01.T01	AT2G18010	56.250	64	27	1	25	88	47	109	1.37e-19	76.6
MsG0480021336.01.T01	AT5G66260	46.591	88	41	2	4	91	17	98	6.25e-19	74.7
MsG0480021336.01.T01	AT3G20220	48.000	75	37	2	16	89	37	110	4.46e-18	73.2
MsG0480021336.01.T01	AT3G43120	51.613	62	29	1	25	86	78	138	4.56e-17	71.6
MsG0480021336.01.T01	AT5G20810	53.226	62	28	1	25	86	78	138	2.23e-16	70.1
MsG0480021336.01.T01	AT3G51200	55.000	60	25	2	25	83	38	96	4.40e-16	67.8
MsG0480021336.01.T01	AT5G20810	53.226	62	28	1	25	86	78	138	5.00e-16	69.7
MsG0480021336.01.T01	AT2G46690	41.667	84	44	3	13	92	10	92	7.29e-16	67.4
MsG0480021336.01.T01	AT1G75590	51.667	60	28	1	25	84	41	99	1.40e-15	67.8
MsG0480021336.01.T01	AT4G34750	45.312	64	34	1	25	88	36	98	3.10e-15	66.6
MsG0480021336.01.T01	AT4G34750	45.312	64	34	1	25	88	36	98	3.10e-15	66.6
MsG0480021336.01.T01	AT5G10990	50.000	60	29	1	25	84	40	98	4.28e-15	66.2
MsG0480021336.01.T01	AT1G19840	50.000	68	31	2	19	84	32	98	9.24e-15	65.5
MsG0480021336.01.T01	AT3G61900	44.286	70	35	2	25	91	29	97	1.56e-14	64.7
MsG0480021336.01.T01	AT2G45210	44.118	68	34	2	26	90	79	145	3.36e-14	64.3
MsG0480021336.01.T01	AT4G31320	52.542	59	27	1	26	84	80	137	5.56e-14	64.3
MsG0480021336.01.T01	AT3G60690	44.928	69	34	2	26	91	88	155	8.03e-14	63.5
MsG0480021336.01.T01	AT2G24400	52.459	61	28	1	26	86	64	123	1.54e-13	62.8
MsG0480021336.01.T01	AT2G37030	50.847	59	28	1	25	83	48	105	3.08e-13	60.8
MsG0480021336.01.T01	AT4G00880	47.059	68	33	2	26	91	28	94	4.84e-13	60.5
MsG0480021336.01.T01	AT5G53590	33.333	96	58	2	1	91	21	115	1.81e-12	59.3
MsG0480021336.01.T01	AT4G12410	42.647	68	35	2	26	90	76	142	4.79e-12	58.5
MsG0480021336.01.T01	AT4G09530	42.254	71	35	3	17	84	22	89	7.66e-12	57.0
MsG0480021336.01.T01	AT3G12830	36.842	76	47	1	16	91	40	114	3.08e-11	55.8
MsG0480021336.01.T01	AT3G09870	45.312	64	32	2	25	86	44	106	4.19e-11	55.1
MsG0480021336.01.T01	AT4G22620	39.706	68	37	2	26	90	79	145	4.35e-11	56.2
MsG0480021336.01.T01	AT2G36210	38.356	73	45	0	16	88	44	116	8.92e-11	54.7

Find 25 sgRNAs with CRISPR-Local

Find 25 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGTCAATTTGAGGAAGAGTT+TGG	0.296654	4:-56866673	MsG0480021336.01.T01:CDS
GGTTGGTTCAAGTATGATAT+TGG	0.299968	4:+56866715	None:intergenic
TTCGAAGCTGATCGGTTTGC+AGG	0.302661	4:+56866805	None:intergenic
GTTGGTTCAAGTATGATATT+GGG	0.382183	4:+56866716	None:intergenic
CCGATCAGCTTCGAAATTTG+TGG	0.393931	4:-56866797	MsG0480021336.01.T01:CDS
CATATGACATCTCGCTTGAA+TGG	0.396465	4:-56866595	MsG0480021336.01.T01:CDS
CTCAATAAGTCTTGAAATGA+TGG	0.413980	4:+56866694	None:intergenic
AGACTTATTGAGTCAATTTG+AGG	0.438566	4:-56866683	MsG0480021336.01.T01:CDS
CCACAAATTTCGAAGCTGAT+CGG	0.483799	4:+56866797	None:intergenic
GAAATTTGTGGACGTGCCAA+AGG	0.518889	4:-56866785	MsG0480021336.01.T01:CDS
ATAAGTCTTGAAATGATGGT+TGG	0.520706	4:+56866698	None:intergenic
CATATGTTGAAATACATCTT+CGG	0.523682	4:+56866612	None:intergenic
TTTCGCTGGTATCATCAGAA+AGG	0.541055	4:-56866836	MsG0480021336.01.T01:CDS
TACATCTTCGGTGCAAGGAA+TGG	0.541149	4:+56866624	None:intergenic
TAAACTGCAAGATATCCCTT+TGG	0.550865	4:+56866769	None:intergenic
AGGAATGGTGAGGCCACCCA+TGG	0.554354	4:+56866639	None:intergenic
AAATTTGTGGACGTGCCAAA+GGG	0.561406	4:-56866784	MsG0480021336.01.T01:CDS
TGAAATACATCTTCGGTGCA+AGG	0.561917	4:+56866619	None:intergenic
GGATATCTTGCAGTTTATGT+CGG	0.564791	4:-56866763	MsG0480021336.01.T01:CDS
GTTTGGATATGATCATCCCA+TGG	0.570301	4:-56866656	MsG0480021336.01.T01:CDS
GGATATGATCATCCCATGGG+TGG	0.600402	4:-56866652	MsG0480021336.01.T01:CDS
GGAATGGTGAGGCCACCCAT+GGG	0.636587	4:+56866640	None:intergenic
TTTGGATATGATCATCCCAT+GGG	0.641263	4:-56866655	MsG0480021336.01.T01:CDS
CTTCGGTGCAAGGAATGGTG+AGG	0.671810	4:+56866629	None:intergenic
ATGTCGGAGAGAAACAAAAG+CGG	0.726695	4:-56866747	MsG0480021336.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	CATATGTTGAAATACATCTT+CGG	+	Chr4:56866826-56866845	None:intergenic	25.0%
	AGACTTATTGAGTCAATTTG+AGG	-	Chr4:56866752-56866771	MsG0480021336.01.T01:CDS	30.0%
	ATAAGTCTTGAAATGATGGT+TGG	+	Chr4:56866740-56866759	None:intergenic	30.0%
	CTCAATAAGTCTTGAAATGA+TGG	+	Chr4:56866744-56866763	None:intergenic	30.0%
!	GTTGGTTCAAGTATGATATT+GGG	+	Chr4:56866722-56866741	None:intergenic	30.0%
	AGTCAATTTGAGGAAGAGTT+TGG	-	Chr4:56866762-56866781	MsG0480021336.01.T01:CDS	35.0%
	GGATATCTTGCAGTTTATGT+CGG	-	Chr4:56866672-56866691	MsG0480021336.01.T01:CDS	35.0%
	TAAACTGCAAGATATCCCTT+TGG	+	Chr4:56866669-56866688	None:intergenic	35.0%
	TTTGGATATGATCATCCCAT+GGG	-	Chr4:56866780-56866799	MsG0480021336.01.T01:CDS	35.0%
!	GGTTGGTTCAAGTATGATAT+TGG	+	Chr4:56866723-56866742	None:intergenic	35.0%
	AAATTTGTGGACGTGCCAAA+GGG	-	Chr4:56866651-56866670	MsG0480021336.01.T01:CDS	40.0%
	ATGTCGGAGAGAAACAAAAG+CGG	-	Chr4:56866688-56866707	MsG0480021336.01.T01:CDS	40.0%
	CATATGACATCTCGCTTGAA+TGG	-	Chr4:56866840-56866859	MsG0480021336.01.T01:CDS	40.0%
	CCACAAATTTCGAAGCTGAT+CGG	+	Chr4:56866641-56866660	None:intergenic	40.0%
	GTTTGGATATGATCATCCCA+TGG	-	Chr4:56866779-56866798	MsG0480021336.01.T01:CDS	40.0%
	TTTCGCTGGTATCATCAGAA+AGG	-	Chr4:56866599-56866618	MsG0480021336.01.T01:CDS	40.0%
!	TGAAATACATCTTCGGTGCA+AGG	+	Chr4:56866819-56866838	None:intergenic	40.0%
	CCGATCAGCTTCGAAATTTG+TGG	-	Chr4:56866638-56866657	MsG0480021336.01.T01:CDS	45.0%
	GAAATTTGTGGACGTGCCAA+AGG	-	Chr4:56866650-56866669	MsG0480021336.01.T01:CDS	45.0%
!	TACATCTTCGGTGCAAGGAA+TGG	+	Chr4:56866814-56866833	None:intergenic	45.0%
	GGATATGATCATCCCATGGG+TGG	-	Chr4:56866783-56866802	MsG0480021336.01.T01:CDS	50.0%
!!	TTCGAAGCTGATCGGTTTGC+AGG	+	Chr4:56866633-56866652	None:intergenic	50.0%
!	CTTCGGTGCAAGGAATGGTG+AGG	+	Chr4:56866809-56866828	None:intergenic	55.0%
	AGGAATGGTGAGGCCACCCA+TGG	+	Chr4:56866799-56866818	None:intergenic	60.0%
	GGAATGGTGAGGCCACCCAT+GGG	+	Chr4:56866798-56866817	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
Chr4	gene	56866588	56866869	56866588	ID=MsG0480021336.01;Name=MsG0480021336.01
Chr4	mRNA	56866588	56866869	56866588	ID=MsG0480021336.01.T01;Parent=MsG0480021336.01;Name=MsG0480021336.01.T01;_AED=0.50;_eAED=0.50;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|93
Chr4	exon	56866588	56866869	56866588	ID=MsG0480021336.01.T01:exon:19178;Parent=MsG0480021336.01.T01
Chr4	CDS	56866588	56866869	56866588	ID=MsG0480021336.01.T01:cds;Parent=MsG0480021336.01.T01

Gene Sequence	>MsG0480021336.01.T01 ATGGGTTTTCGTTTCGCTGGTATCATCAGAAAGGCATCATTTCCTGCAAACCGATCAGCTTCGAAATTTGTGGACGTGCCAAAGGGATATCTTGCAGTTTATGTCGGAGAGAAACAAAAGCGGTATGTGATCCCAATATCATACTTGAACCAACCATCATTTCAAGACTTATTGAGTCAATTTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACCATTCCTTGCACCGAAGATGTATTTCAACATATGACATCTCGCTTGAATGGACTATGA
Protein sequence	>MsG0480021336.01.T01 MGFRFAGIIRKASFPANRSASKFVDVPKGYLAVYVGEKQKRYVIPISYLNQPSFQDLLSQFEEEFGYDHPMGGLTIPCTEDVFQHMTSRLNGL*