Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021381.01.T01 | AES89351.1 | 92.222 | 90 | 7 | 0 | 1 | 90 | 1 | 90 | 1.94E-54 | 174 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021381.01.T01 | P33080 | 71.739 | 92 | 24 | 1 | 1 | 90 | 1 | 92 | 3.06E-44 | 140 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021381.01.T01 | G7JMA8 | 92.222 | 90 | 7 | 0 | 1 | 90 | 1 | 90 | 9.27e-55 | 174 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048773.01 | MsG0480021381.01 | 0.821916 | 3.130909e-53 | 2.581817e-50 |
| MsG0080049040.01 | MsG0480021381.01 | 0.820046 | 8.434265e-53 | 6.602017e-50 |
| MsG0080049068.01 | MsG0480021381.01 | 0.819221 | 1.301714e-52 | 9.956382e-50 |
| MsG0180000599.01 | MsG0480021381.01 | 0.802870 | 4.568795e-49 | 2.262822e-46 |
| MsG0180000670.01 | MsG0480021381.01 | 0.808243 | 3.407813e-50 | 1.938651e-47 |
| MsG0180000677.01 | MsG0480021381.01 | 0.812241 | 4.680615e-51 | 2.960349e-48 |
| MsG0180000782.01 | MsG0480021381.01 | 0.804774 | 1.837749e-49 | 9.558418e-47 |
| MsG0180000785.01 | MsG0480021381.01 | 0.816984 | 4.172487e-52 | 3.001259e-49 |
| MsG0180001064.01 | MsG0480021381.01 | 0.800875 | 1.173623e-48 | 5.525912e-46 |
| MsG0180001085.01 | MsG0480021381.01 | 0.826952 | 2.045568e-54 | 1.946968e-51 |
| MsG0180001100.01 | MsG0480021381.01 | 0.812534 | 4.040492e-51 | 2.575585e-48 |
| MsG0180001175.01 | MsG0480021381.01 | 0.815789 | 7.722063e-52 | 5.375743e-49 |
| MsG0180001270.01 | MsG0480021381.01 | 0.826894 | 2.111694e-54 | 2.006499e-51 |
| MsG0180001371.01 | MsG0480021381.01 | 0.806054 | 9.907454e-50 | 5.325271e-47 |
| MsG0180002929.01 | MsG0480021381.01 | 0.810800 | 9.625426e-51 | 5.858443e-48 |
| MsG0180003353.01 | MsG0480021381.01 | 0.808033 | 3.777593e-50 | 2.136991e-47 |
| MsG0180003906.01 | MsG0480021381.01 | 0.830431 | 2.948638e-55 | 3.105932e-52 |
| MsG0180004103.01 | MsG0480021381.01 | 0.809634 | 1.717509e-50 | 1.013750e-47 |
| MsG0180004246.01 | MsG0480021381.01 | 0.819024 | 1.443143e-52 | 1.097964e-49 |
| MsG0180004493.01 | MsG0480021381.01 | 0.800778 | 1.228386e-48 | 5.769096e-46 |
| MsG0180004735.01 | MsG0480021381.01 | 0.822650 | 2.114183e-53 | 1.780365e-50 |
| MsG0180004934.01 | MsG0480021381.01 | 0.812682 | 3.750248e-51 | 2.399835e-48 |
| MsG0180005039.01 | MsG0480021381.01 | 0.809381 | 1.946595e-50 | 1.141197e-47 |
| MsG0180005803.01 | MsG0480021381.01 | 0.800968 | 1.123650e-48 | 5.303085e-46 |
| MsG0180005807.01 | MsG0480021381.01 | 0.849846 | 2.487107e-60 | 4.778171e-57 |
| MsG0280010564.01 | MsG0480021381.01 | 0.804035 | 2.620195e-49 | 1.337117e-46 |
| MsG0280010569.01 | MsG0480021381.01 | 0.804052 | 2.599490e-49 | 1.327114e-46 |
| MsG0280010975.01 | MsG0480021381.01 | 0.834666 | 2.626626e-56 | 3.138158e-53 |
| MsG0380014809.01 | MsG0480021381.01 | 0.803227 | 3.854378e-49 | 1.926403e-46 |
| MsG0380014906.01 | MsG0480021381.01 | 0.801085 | 1.063352e-48 | 5.033439e-46 |
| MsG0380014909.01 | MsG0480021381.01 | 0.827773 | 1.299781e-54 | 1.267043e-51 |
| MsG0480019340.01 | MsG0480021381.01 | 0.800355 | 1.498063e-48 | 6.960960e-46 |
| MsG0480019501.01 | MsG0480021381.01 | 0.823949 | 1.051276e-53 | 9.184138e-51 |
| MsG0480019971.01 | MsG0480021381.01 | 0.842841 | 2.021070e-58 | 3.103024e-55 |
| MsG0480020315.01 | MsG0480021381.01 | 0.809972 | 1.452976e-50 | 8.652132e-48 |
| MsG0480020690.01 | MsG0480021381.01 | 0.812778 | 3.571840e-51 | 2.291369e-48 |
| MsG0480020753.01 | MsG0480021381.01 | 0.807584 | 4.706352e-50 | 2.631180e-47 |
| MsG0480020890.01 | MsG0480021381.01 | 0.850827 | 1.319897e-60 | 2.618920e-57 |
| MsG0480021336.01 | MsG0480021381.01 | 0.836038 | 1.182757e-56 | 1.472617e-53 |
| MsG0480021337.01 | MsG0480021381.01 | 0.819641 | 1.043708e-52 | 8.077208e-50 |
| MsG0480021367.01 | MsG0480021381.01 | 0.808800 | 2.592139e-50 | 1.496145e-47 |
| MsG0480021369.01 | MsG0480021381.01 | 0.804482 | 2.115097e-49 | 1.091757e-46 |
| MsG0480021370.01 | MsG0480021381.01 | 0.805303 | 1.424477e-49 | 7.510166e-47 |
| MsG0480021377.01 | MsG0480021381.01 | 0.828830 | 7.226497e-55 | 7.264780e-52 |
| MsG0480021381.01 | MsG0480021783.01 | 0.800695 | 1.277442e-48 | 5.986897e-46 |
| MsG0480021381.01 | MsG0480022260.01 | 0.804773 | 1.838970e-49 | 9.564391e-47 |
| MsG0480021381.01 | MsG0480022355.01 | 0.831411 | 1.695028e-55 | 1.837818e-52 |
| MsG0480021381.01 | MsG0480022537.01 | 0.821483 | 3.941747e-53 | 3.210862e-50 |
| MsG0480021381.01 | MsG0480022647.01 | 0.813886 | 2.039835e-51 | 1.348380e-48 |
| MsG0480021381.01 | MsG0480023216.01 | 0.805891 | 1.072626e-49 | 5.741175e-47 |
| MsG0480021381.01 | MsG0480023314.01 | 0.801367 | 9.310471e-49 | 4.438469e-46 |
| MsG0480021381.01 | MsG0480023553.01 | 0.800511 | 1.392533e-48 | 6.495996e-46 |
| MsG0480021381.01 | MsG0480023565.01 | 0.801267 | 9.758377e-49 | 4.640254e-46 |
| MsG0480021381.01 | MsG0480023661.01 | 0.820948 | 5.237747e-53 | 4.203764e-50 |
| MsG0480021381.01 | MsG0480023845.01 | 0.815874 | 7.392151e-52 | 5.157518e-49 |
| MsG0480021381.01 | MsG0480023990.01 | 0.811747 | 5.996649e-51 | 3.742380e-48 |
| MsG0480021381.01 | MsG0480023992.01 | 0.821729 | 3.458935e-53 | 2.837127e-50 |
| MsG0480021381.01 | MsG0580024759.01 | 0.824514 | 7.745067e-54 | 6.875424e-51 |
| MsG0480021381.01 | MsG0580024873.01 | 0.805771 | 1.136483e-49 | 6.064576e-47 |
| MsG0480021381.01 | MsG0580025256.01 | 0.802334 | 5.893888e-49 | 2.879556e-46 |
| MsG0480021381.01 | MsG0580025502.01 | 0.803780 | 2.960191e-49 | 1.500698e-46 |
| MsG0480021381.01 | MsG0580025668.01 | 0.802950 | 4.398208e-49 | 2.182699e-46 |
| MsG0480021381.01 | MsG0580025828.01 | 0.805035 | 1.621113e-49 | 8.488154e-47 |
| MsG0480021381.01 | MsG0580025971.01 | 0.801154 | 1.029331e-48 | 4.880801e-46 |
| MsG0480021381.01 | MsG0580027394.01 | 0.818639 | 1.764462e-52 | 1.328046e-49 |
| MsG0480021381.01 | MsG0580027763.01 | 0.827486 | 1.523400e-54 | 1.472806e-51 |
| MsG0480021381.01 | MsG0580027826.01 | 0.820650 | 6.130955e-53 | 4.879335e-50 |
| MsG0480021381.01 | MsG0580028024.01 | 0.827510 | 1.503642e-54 | 1.454633e-51 |
| MsG0480021381.01 | MsG0580028306.01 | 0.808926 | 2.436075e-50 | 1.410787e-47 |
| MsG0480021381.01 | MsG0580028723.01 | 0.804192 | 2.430538e-49 | 1.245255e-46 |
| MsG0480021381.01 | MsG0580029414.01 | 0.816262 | 6.055693e-52 | 4.270567e-49 |
| MsG0480021381.01 | MsG0580029529.01 | 0.841837 | 3.729912e-58 | 5.549251e-55 |
| MsG0480021381.01 | MsG0680030680.01 | 0.835903 | 1.279302e-56 | 1.586355e-53 |
| MsG0480021381.01 | MsG0680030858.01 | 0.833136 | 6.342056e-56 | 7.238707e-53 |
| MsG0480021381.01 | MsG0680030957.01 | 0.807603 | 4.662580e-50 | 2.608036e-47 |
| MsG0480021381.01 | MsG0680031939.01 | 0.804134 | 2.499132e-49 | 1.278529e-46 |
| MsG0480021381.01 | MsG0680032830.01 | 0.815162 | 1.064491e-51 | 7.283505e-49 |
| MsG0480021381.01 | MsG0680033377.01 | 0.822773 | 1.979397e-53 | 1.672725e-50 |
| MsG0480021381.01 | MsG0680034064.01 | 0.808400 | 3.154856e-50 | 1.802161e-47 |
| MsG0480021381.01 | MsG0680035731.01 | 0.805616 | 1.225134e-49 | 6.511245e-47 |
| MsG0480021381.01 | MsG0780036979.01 | 0.807805 | 4.224403e-50 | 2.375504e-47 |
| MsG0480021381.01 | MsG0780038616.01 | 0.809272 | 2.054339e-50 | 1.200834e-47 |
| MsG0480021381.01 | MsG0780038784.01 | 0.814171 | 1.764865e-51 | 1.175641e-48 |
| MsG0480021381.01 | MsG0780039186.01 | 0.826820 | 2.199582e-54 | 2.085464e-51 |
| MsG0480021381.01 | MsG0780039675.01 | 0.831136 | 1.980783e-55 | 2.130230e-52 |
| MsG0480021381.01 | MsG0780039975.01 | 0.830536 | 2.779662e-55 | 2.936806e-52 |
| MsG0480021381.01 | MsG0780040278.01 | 0.810715 | 1.004045e-50 | 6.097474e-48 |
| MsG0480021381.01 | MsG0780040343.01 | 0.824134 | 9.513459e-54 | 8.353907e-51 |
| MsG0480021381.01 | MsG0780040388.01 | 0.805947 | 1.043585e-49 | 5.593902e-47 |
| MsG0480021381.01 | MsG0780040431.01 | 0.809528 | 1.810071e-50 | 1.065293e-47 |
| MsG0480021381.01 | MsG0780041262.01 | 0.809678 | 1.680345e-50 | 9.929255e-48 |
| MsG0480021381.01 | MsG0780041302.01 | 0.809938 | 1.477508e-50 | 8.790396e-48 |
| MsG0480021381.01 | MsG0880042890.01 | 0.807299 | 5.409204e-50 | 3.002038e-47 |
| MsG0480021381.01 | MsG0880043249.01 | 0.810720 | 1.001762e-50 | 6.084302e-48 |
| MsG0480021381.01 | MsG0880044392.01 | 0.807046 | 6.120397e-50 | 3.374345e-47 |
| MsG0480021381.01 | MsG0880044487.01 | 0.825162 | 5.447285e-54 | 4.926627e-51 |
| MsG0480021381.01 | MsG0880044884.01 | 0.803302 | 3.720505e-49 | 1.863012e-46 |
| MsG0480021381.01 | MsG0880045101.01 | 0.800653 | 1.302803e-48 | 6.099467e-46 |
| MsG0480021381.01 | MsG0880045558.01 | 0.834572 | 2.773550e-56 | 3.304977e-53 |
| MsG0480021381.01 | MsG0880045668.01 | 0.804326 | 2.279351e-49 | 1.171855e-46 |
| MsG0480021381.01 | MsG0880046764.01 | 0.812076 | 5.086379e-51 | 3.202488e-48 |
| MsG0480021381.01 | MsG0880046765.01 | 0.813721 | 2.217964e-51 | 1.459616e-48 |
| MsG0380014926.01 | MsG0480021381.01 | 0.809202 | 2.126104e-50 | 1.240518e-47 |
| MsG0380014940.01 | MsG0480021381.01 | 0.805394 | 1.363735e-49 | 7.206539e-47 |
| MsG0380015603.01 | MsG0480021381.01 | 0.800195 | 1.614963e-48 | 7.473328e-46 |
| MsG0380015754.01 | MsG0480021381.01 | 0.837433 | 5.214502e-57 | 6.772277e-54 |
| MsG0380015896.01 | MsG0480021381.01 | 0.824479 | 7.895545e-54 | 7.001527e-51 |
| MsG0380016135.01 | MsG0480021381.01 | 0.828404 | 9.160155e-55 | 9.096285e-52 |
| MsG0380016138.01 | MsG0480021381.01 | 0.802179 | 6.342256e-49 | 3.086250e-46 |
| MsG0380016192.01 | MsG0480021381.01 | 0.809858 | 1.536828e-50 | 9.124164e-48 |
| MsG0380016284.01 | MsG0480021381.01 | 0.824881 | 6.346644e-54 | 5.694362e-51 |
| MsG0380016771.01 | MsG0480021381.01 | 0.831289 | 1.816243e-55 | 1.962116e-52 |
| MsG0380017087.01 | MsG0480021381.01 | 0.802271 | 6.073243e-49 | 2.962354e-46 |
| MsG0380017423.01 | MsG0480021381.01 | 0.841053 | 5.998117e-58 | 8.707699e-55 |
| MsG0380018037.01 | MsG0480021381.01 | 0.837965 | 3.807859e-57 | 5.027406e-54 |
| MsG0380018069.01 | MsG0480021381.01 | 0.835236 | 1.887003e-56 | 2.293754e-53 |
| MsG0480018218.01 | MsG0480021381.01 | 0.806519 | 7.908658e-50 | 4.301521e-47 |
| MsG0480018423.01 | MsG0480021381.01 | 0.800048 | 1.729769e-48 | 7.974953e-46 |
| MsG0280006996.01 | MsG0480021381.01 | 0.805682 | 1.186413e-49 | 6.316470e-47 |
| MsG0280007075.01 | MsG0480021381.01 | 0.807633 | 4.595638e-50 | 2.572654e-47 |
| MsG0280007976.01 | MsG0480021381.01 | 0.810193 | 1.302040e-50 | 7.797644e-48 |
| MsG0280008394.01 | MsG0480021381.01 | 0.802952 | 4.393866e-49 | 2.180670e-46 |
| MsG0280009256.01 | MsG0480021381.01 | 0.804920 | 1.713345e-49 | 8.945459e-47 |
| MsG0280009635.01 | MsG0480021381.01 | 0.802260 | 6.104854e-49 | 2.976906e-46 |
| MsG0280009755.01 | MsG0480021381.01 | 0.809223 | 2.104319e-50 | 1.228475e-47 |
| MsG0280009756.01 | MsG0480021381.01 | 0.823519 | 1.325787e-53 | 1.144179e-50 |
| MsG0280010353.01 | MsG0480021381.01 | 0.834187 | 3.464400e-56 | 4.079976e-53 |
PPI
| Gene1 | Gene2 | Type |
|---|---|---|
| MsG0480021381.01 | MsG0480021386.01 | PPI |
| MsG0480021381.01 | MsG0480021386.01 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021381.01.T01 | MTR_4g072830 | 92.222 | 90 | 7 | 0 | 1 | 90 | 1 | 90 | 2.35e-58 | 174 |
| MsG0480021381.01.T01 | MTR_4g072370 | 88.636 | 88 | 10 | 0 | 1 | 88 | 1 | 88 | 4.86e-54 | 163 |
| MsG0480021381.01.T01 | MTR_4g072330 | 85.227 | 88 | 13 | 0 | 1 | 88 | 1 | 88 | 3.87e-53 | 160 |
| MsG0480021381.01.T01 | MTR_4g072580 | 87.640 | 89 | 8 | 1 | 1 | 89 | 1 | 86 | 3.07e-52 | 158 |
| MsG0480021381.01.T01 | MTR_4g072740 | 85.227 | 88 | 10 | 1 | 1 | 88 | 1 | 85 | 1.39e-50 | 154 |
| MsG0480021381.01.T01 | MTR_4g072490 | 81.818 | 88 | 13 | 1 | 1 | 88 | 1 | 85 | 4.58e-49 | 150 |
| MsG0480021381.01.T01 | MTR_4g072600 | 83.146 | 89 | 12 | 1 | 1 | 89 | 1 | 86 | 1.70e-48 | 149 |
| MsG0480021381.01.T01 | MTR_4g072470 | 84.091 | 88 | 11 | 1 | 1 | 88 | 1 | 85 | 2.35e-48 | 148 |
| MsG0480021381.01.T01 | MTR_4g072630 | 79.545 | 88 | 16 | 1 | 1 | 88 | 1 | 86 | 8.64e-48 | 147 |
| MsG0480021381.01.T01 | MTR_4g072540 | 80.682 | 88 | 15 | 1 | 1 | 88 | 1 | 86 | 4.50e-46 | 142 |
| MsG0480021381.01.T01 | MTR_3g084150 | 72.826 | 92 | 23 | 1 | 1 | 90 | 1 | 92 | 9.41e-46 | 142 |
| MsG0480021381.01.T01 | MTR_4g072670 | 81.818 | 88 | 14 | 1 | 1 | 88 | 1 | 86 | 1.29e-45 | 141 |
| MsG0480021381.01.T01 | MTR_4g072870 | 72.527 | 91 | 22 | 1 | 1 | 88 | 1 | 91 | 2.62e-45 | 140 |
| MsG0480021381.01.T01 | MTR_3g084180 | 71.739 | 92 | 24 | 1 | 1 | 90 | 1 | 92 | 5.81e-45 | 140 |
| MsG0480021381.01.T01 | MTR_4g072465 | 76.136 | 88 | 19 | 1 | 1 | 88 | 1 | 86 | 7.46e-45 | 139 |
| MsG0480021381.01.T01 | MTR_4g072510 | 78.409 | 88 | 17 | 1 | 1 | 88 | 1 | 86 | 1.74e-44 | 139 |
| MsG0480021381.01.T01 | MTR_8g461410 | 70.652 | 92 | 25 | 1 | 1 | 90 | 1 | 92 | 3.92e-44 | 138 |
| MsG0480021381.01.T01 | MTR_4g072240 | 69.231 | 91 | 25 | 1 | 1 | 88 | 1 | 91 | 9.16e-44 | 137 |
| MsG0480021381.01.T01 | MTR_4g072310 | 72.043 | 93 | 23 | 1 | 1 | 90 | 1 | 93 | 1.11e-43 | 137 |
| MsG0480021381.01.T01 | MTR_3g110032 | 70.968 | 93 | 24 | 1 | 1 | 90 | 1 | 93 | 1.44e-43 | 136 |
| MsG0480021381.01.T01 | MTR_3g110038 | 72.826 | 92 | 23 | 1 | 1 | 90 | 1 | 92 | 1.46e-43 | 136 |
| MsG0480021381.01.T01 | MTR_4g072610 | 74.157 | 89 | 19 | 1 | 1 | 89 | 1 | 85 | 1.68e-43 | 136 |
| MsG0480021381.01.T01 | MTR_4g072220 | 69.892 | 93 | 25 | 1 | 1 | 90 | 1 | 93 | 2.07e-43 | 136 |
| MsG0480021381.01.T01 | MTR_3g084170 | 72.826 | 92 | 23 | 1 | 1 | 90 | 1 | 92 | 2.35e-43 | 136 |
| MsG0480021381.01.T01 | MTR_4g072880 | 71.429 | 91 | 23 | 1 | 1 | 88 | 1 | 91 | 2.76e-43 | 135 |
| MsG0480021381.01.T01 | MTR_4g072300 | 68.132 | 91 | 26 | 1 | 1 | 88 | 1 | 91 | 6.46e-43 | 135 |
| MsG0480021381.01.T01 | MTR_4g072720 | 76.136 | 88 | 19 | 1 | 1 | 88 | 1 | 86 | 8.73e-43 | 134 |
| MsG0480021381.01.T01 | MTR_4g072650 | 76.404 | 89 | 17 | 2 | 1 | 89 | 1 | 85 | 1.40e-42 | 134 |
| MsG0480021381.01.T01 | MTR_3g084240 | 71.739 | 92 | 24 | 1 | 1 | 90 | 1 | 92 | 1.95e-42 | 134 |
| MsG0480021381.01.T01 | MTR_4g072260 | 67.742 | 93 | 27 | 1 | 1 | 90 | 1 | 93 | 2.39e-42 | 133 |
| MsG0480021381.01.T01 | MTR_4g072250 | 74.725 | 91 | 19 | 2 | 1 | 88 | 1 | 90 | 4.79e-42 | 132 |
| MsG0480021381.01.T01 | MTR_4g050700 | 69.892 | 93 | 25 | 1 | 1 | 90 | 1 | 93 | 8.00e-42 | 132 |
| MsG0480021381.01.T01 | MTR_2g012410 | 69.892 | 93 | 25 | 1 | 1 | 90 | 1 | 93 | 8.00e-42 | 132 |
| MsG0480021381.01.T01 | MTR_4g072860 | 74.194 | 93 | 21 | 1 | 1 | 90 | 1 | 93 | 8.73e-42 | 132 |
| MsG0480021381.01.T01 | MTR_5g008350 | 81.818 | 77 | 11 | 1 | 1 | 77 | 1 | 74 | 1.36e-41 | 131 |
| MsG0480021381.01.T01 | MTR_4g072230 | 73.118 | 93 | 20 | 2 | 1 | 90 | 1 | 91 | 2.19e-41 | 131 |
| MsG0480021381.01.T01 | MTR_4g072890 | 67.033 | 91 | 27 | 1 | 1 | 88 | 1 | 91 | 2.49e-41 | 130 |
| MsG0480021381.01.T01 | MTR_4g072730 | 68.889 | 90 | 26 | 1 | 1 | 88 | 1 | 90 | 3.65e-41 | 130 |
| MsG0480021381.01.T01 | MTR_3g084220 | 69.565 | 92 | 26 | 1 | 1 | 90 | 1 | 92 | 4.80e-41 | 130 |
| MsG0480021381.01.T01 | MTR_4g072690 | 78.409 | 88 | 16 | 1 | 1 | 88 | 1 | 85 | 5.80e-41 | 129 |
| MsG0480021381.01.T01 | MTR_3g084260 | 69.231 | 91 | 25 | 1 | 1 | 88 | 1 | 91 | 7.02e-41 | 130 |
| MsG0480021381.01.T01 | MTR_4g072640 | 71.429 | 91 | 24 | 1 | 1 | 89 | 1 | 91 | 7.95e-41 | 129 |
| MsG0480021381.01.T01 | MTR_4g072270 | 67.742 | 93 | 27 | 1 | 1 | 90 | 1 | 93 | 1.10e-40 | 129 |
| MsG0480021381.01.T01 | MTR_4g072500 | 72.043 | 93 | 22 | 2 | 1 | 90 | 1 | 92 | 1.33e-40 | 129 |
| MsG0480021381.01.T01 | MTR_3g084250 | 67.391 | 92 | 28 | 1 | 1 | 90 | 1 | 92 | 4.30e-40 | 127 |
| MsG0480021381.01.T01 | MTR_4g072480 | 66.304 | 92 | 29 | 1 | 1 | 90 | 1 | 92 | 5.36e-40 | 127 |
| MsG0480021381.01.T01 | MTR_4g072620 | 65.217 | 92 | 30 | 1 | 1 | 90 | 1 | 92 | 6.46e-40 | 127 |
| MsG0480021381.01.T01 | MTR_3g117630 | 68.889 | 90 | 25 | 1 | 4 | 90 | 3 | 92 | 6.67e-40 | 127 |
| MsG0480021381.01.T01 | MTR_3g110042 | 72.414 | 87 | 22 | 1 | 1 | 85 | 1 | 87 | 6.75e-40 | 127 |
| MsG0480021381.01.T01 | MTR_4g072570 | 70.968 | 93 | 23 | 2 | 1 | 90 | 1 | 92 | 8.49e-40 | 127 |
| MsG0480021381.01.T01 | MTR_4g072450 | 75.000 | 88 | 19 | 1 | 1 | 88 | 1 | 85 | 1.44e-39 | 126 |
| MsG0480021381.01.T01 | MTR_4g072820 | 72.727 | 88 | 19 | 2 | 1 | 87 | 1 | 84 | 1.75e-39 | 126 |
| MsG0480021381.01.T01 | MTR_4g072590 | 76.136 | 88 | 18 | 1 | 1 | 88 | 1 | 85 | 1.82e-39 | 126 |
| MsG0480021381.01.T01 | MTR_4g072530 | 70.330 | 91 | 23 | 2 | 1 | 88 | 1 | 90 | 4.10e-39 | 125 |
| MsG0480021381.01.T01 | MTR_4g072380 | 74.419 | 86 | 18 | 2 | 1 | 85 | 1 | 83 | 5.70e-39 | 125 |
| MsG0480021381.01.T01 | MTR_4g072680 | 65.217 | 92 | 30 | 1 | 1 | 90 | 1 | 92 | 5.85e-39 | 125 |
| MsG0480021381.01.T01 | MTR_4g072850 | 69.149 | 94 | 25 | 1 | 1 | 90 | 1 | 94 | 5.81e-38 | 122 |
| MsG0480021381.01.T01 | MTR_4g072660 | 64.444 | 90 | 29 | 1 | 1 | 90 | 1 | 87 | 1.03e-37 | 121 |
| MsG0480021381.01.T01 | MTR_4g072460 | 63.043 | 92 | 32 | 1 | 1 | 90 | 1 | 92 | 1.42e-37 | 121 |
| MsG0480021381.01.T01 | MTR_3g084160 | 66.304 | 92 | 29 | 1 | 1 | 90 | 1 | 92 | 5.92e-37 | 120 |
| MsG0480021381.01.T01 | MTR_3g084190 | 65.217 | 92 | 30 | 1 | 1 | 90 | 1 | 92 | 1.26e-36 | 119 |
| MsG0480021381.01.T01 | MTR_3g084210 | 65.217 | 92 | 30 | 1 | 1 | 90 | 1 | 92 | 2.04e-36 | 118 |
| MsG0480021381.01.T01 | MTR_8g461420 | 65.217 | 92 | 30 | 1 | 1 | 90 | 1 | 92 | 3.07e-36 | 118 |
| MsG0480021381.01.T01 | MTR_5g008360 | 73.684 | 76 | 20 | 0 | 15 | 90 | 8 | 83 | 4.67e-36 | 117 |
| MsG0480021381.01.T01 | MTR_3g084230 | 65.217 | 92 | 30 | 1 | 1 | 90 | 1 | 92 | 6.05e-36 | 117 |
| MsG0480021381.01.T01 | MTR_5g008370 | 67.778 | 90 | 27 | 1 | 1 | 88 | 1 | 90 | 1.84e-35 | 117 |
| MsG0480021381.01.T01 | MTR_3g110045 | 75.000 | 72 | 18 | 0 | 19 | 90 | 80 | 151 | 1.96e-35 | 118 |
| MsG0480021381.01.T01 | MTR_4g072940 | 67.391 | 92 | 26 | 1 | 3 | 90 | 33 | 124 | 1.51e-34 | 115 |
| MsG0480021381.01.T01 | MTR_4g072560 | 54.082 | 98 | 33 | 3 | 1 | 87 | 1 | 97 | 7.31e-33 | 109 |
| MsG0480021381.01.T01 | MTR_4g072980 | 54.348 | 92 | 37 | 2 | 1 | 87 | 1 | 92 | 2.59e-32 | 108 |
| MsG0480021381.01.T01 | MTR_3g117640 | 52.525 | 99 | 35 | 2 | 1 | 87 | 1 | 99 | 1.64e-31 | 106 |
| MsG0480021381.01.T01 | MTR_4g072550 | 67.123 | 73 | 24 | 0 | 18 | 90 | 31 | 103 | 3.01e-31 | 105 |
| MsG0480021381.01.T01 | MTR_3g084200 | 69.444 | 72 | 20 | 1 | 1 | 70 | 1 | 72 | 3.69e-31 | 105 |
| MsG0480021381.01.T01 | MTR_4g072910 | 58.824 | 85 | 34 | 1 | 4 | 88 | 17 | 100 | 6.26e-31 | 105 |
| MsG0480021381.01.T01 | MTR_4g072770 | 72.308 | 65 | 18 | 0 | 23 | 87 | 15 | 79 | 2.16e-30 | 103 |
| MsG0480021381.01.T01 | MTR_3g110035 | 58.333 | 84 | 30 | 1 | 7 | 90 | 60 | 138 | 3.45e-29 | 101 |
| MsG0480021381.01.T01 | MTR_4g072750 | 64.865 | 74 | 22 | 1 | 1 | 70 | 1 | 74 | 1.22e-27 | 96.3 |
| MsG0480021381.01.T01 | MTR_4g072280 | 61.333 | 75 | 26 | 1 | 1 | 72 | 1 | 75 | 3.47e-27 | 95.1 |
| MsG0480021381.01.T01 | MTR_4g072290 | 55.914 | 93 | 24 | 2 | 1 | 90 | 1 | 79 | 5.51e-26 | 92.0 |
| MsG0480021381.01.T01 | MTR_6g077850 | 52.500 | 80 | 38 | 0 | 10 | 89 | 21 | 100 | 1.54e-25 | 91.3 |
| MsG0480021381.01.T01 | MTR_3g113310 | 58.209 | 67 | 27 | 1 | 21 | 87 | 40 | 105 | 3.76e-24 | 88.2 |
| MsG0480021381.01.T01 | MTR_3g117610 | 59.420 | 69 | 27 | 1 | 21 | 89 | 43 | 110 | 4.96e-24 | 87.8 |
| MsG0480021381.01.T01 | MTR_4g072190 | 51.190 | 84 | 39 | 2 | 5 | 87 | 17 | 99 | 3.06e-23 | 85.5 |
| MsG0480021381.01.T01 | MTR_4g072930 | 51.852 | 81 | 34 | 2 | 13 | 88 | 30 | 110 | 2.43e-22 | 83.6 |
| MsG0480021381.01.T01 | MTR_5g021820 | 54.545 | 66 | 29 | 1 | 22 | 87 | 39 | 103 | 5.64e-20 | 77.4 |
| MsG0480021381.01.T01 | MTR_8g461400 | 48.913 | 92 | 19 | 2 | 1 | 90 | 1 | 66 | 1.44e-19 | 75.1 |
| MsG0480021381.01.T01 | MTR_8g076040 | 47.059 | 85 | 37 | 2 | 8 | 85 | 19 | 102 | 2.19e-19 | 75.9 |
| MsG0480021381.01.T01 | MTR_4g072840 | 48.864 | 88 | 15 | 3 | 1 | 87 | 1 | 59 | 3.39e-18 | 71.6 |
| MsG0480021381.01.T01 | MTR_2g043960 | 45.556 | 90 | 37 | 2 | 2 | 80 | 44 | 132 | 3.86e-18 | 74.3 |
| MsG0480021381.01.T01 | MTR_1g094750 | 54.839 | 62 | 27 | 1 | 22 | 83 | 49 | 109 | 5.79e-18 | 72.8 |
| MsG0480021381.01.T01 | MTR_4g124750 | 55.932 | 59 | 25 | 1 | 22 | 80 | 68 | 125 | 3.78e-17 | 71.6 |
| MsG0480021381.01.T01 | MTR_4g025830 | 42.529 | 87 | 42 | 3 | 5 | 88 | 65 | 146 | 5.68e-17 | 71.2 |
| MsG0480021381.01.T01 | MTR_1g009150 | 51.471 | 68 | 32 | 1 | 16 | 83 | 64 | 130 | 4.82e-16 | 69.3 |
| MsG0480021381.01.T01 | MTR_4g005310 | 51.613 | 62 | 29 | 1 | 23 | 83 | 62 | 123 | 5.34e-16 | 68.6 |
| MsG0480021381.01.T01 | MTR_7g118010 | 47.826 | 69 | 33 | 2 | 23 | 89 | 23 | 90 | 5.38e-16 | 67.4 |
| MsG0480021381.01.T01 | MTR_1g063950 | 44.286 | 70 | 38 | 1 | 14 | 83 | 39 | 107 | 5.62e-16 | 67.8 |
| MsG0480021381.01.T01 | MTR_7g101740 | 51.562 | 64 | 30 | 1 | 22 | 85 | 39 | 101 | 7.09e-16 | 67.4 |
| MsG0480021381.01.T01 | MTR_1g061570 | 51.389 | 72 | 32 | 2 | 14 | 83 | 8 | 78 | 1.39e-15 | 66.6 |
| MsG0480021381.01.T01 | MTR_0388s0020 | 44.737 | 76 | 38 | 2 | 16 | 88 | 68 | 142 | 1.73e-15 | 67.0 |
| MsG0480021381.01.T01 | MTR_4g072160 | 41.860 | 86 | 49 | 1 | 4 | 89 | 18 | 102 | 3.41e-15 | 66.2 |
| MsG0480021381.01.T01 | MTR_1g024085 | 41.758 | 91 | 47 | 2 | 4 | 89 | 13 | 102 | 3.96e-15 | 66.2 |
| MsG0480021381.01.T01 | MTR_3g092220 | 46.377 | 69 | 34 | 2 | 14 | 80 | 24 | 91 | 6.61e-15 | 64.7 |
| MsG0480021381.01.T01 | MTR_8g461210 | 48.529 | 68 | 34 | 1 | 22 | 89 | 34 | 100 | 1.51e-14 | 63.9 |
| MsG0480021381.01.T01 | MTR_4g005320 | 50.820 | 61 | 29 | 1 | 23 | 83 | 70 | 129 | 1.64e-14 | 65.1 |
| MsG0480021381.01.T01 | MTR_3g105900 | 66.667 | 42 | 14 | 0 | 22 | 63 | 1171 | 1212 | 3.37e-14 | 66.6 |
| MsG0480021381.01.T01 | MTR_8g026730 | 43.478 | 69 | 36 | 2 | 23 | 89 | 27 | 94 | 3.91e-14 | 62.8 |
| MsG0480021381.01.T01 | MTR_3g109160 | 52.459 | 61 | 28 | 1 | 23 | 83 | 69 | 128 | 3.46e-13 | 61.6 |
| MsG0480021381.01.T01 | MTR_5g008380 | 84.375 | 32 | 5 | 0 | 57 | 88 | 246 | 277 | 1.14e-12 | 61.6 |
| MsG0480021381.01.T01 | MTR_2g095430 | 40.541 | 74 | 39 | 2 | 7 | 76 | 29 | 101 | 5.37e-12 | 57.8 |
| MsG0480021381.01.T01 | MTR_3g097120 | 41.772 | 79 | 37 | 2 | 19 | 89 | 5 | 82 | 7.95e-12 | 56.6 |
| MsG0480021381.01.T01 | MTR_8g101520 | 43.939 | 66 | 36 | 1 | 24 | 89 | 51 | 115 | 1.29e-11 | 57.4 |
| MsG0480021381.01.T01 | MTR_7g405740 | 42.623 | 61 | 34 | 1 | 23 | 83 | 67 | 126 | 4.49e-11 | 55.8 |
| MsG0480021381.01.T01 | MTR_1g059770 | 36.923 | 65 | 40 | 1 | 23 | 87 | 49 | 112 | 6.64e-11 | 54.7 |
| MsG0480021381.01.T01 | MTR_2g066830 | 39.241 | 79 | 43 | 3 | 2 | 80 | 41 | 114 | 7.00e-11 | 55.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0480021381.01.T01 | AT4G38840 | 70.588 | 68 | 19 | 1 | 22 | 88 | 32 | 99 | 3.09e-33 | 110 |
| MsG0480021381.01.T01 | AT5G18020 | 60.241 | 83 | 28 | 2 | 8 | 89 | 13 | 91 | 4.47e-33 | 110 |
| MsG0480021381.01.T01 | AT5G18080 | 61.333 | 75 | 28 | 1 | 14 | 87 | 15 | 89 | 3.81e-32 | 107 |
| MsG0480021381.01.T01 | AT5G18050 | 58.025 | 81 | 29 | 2 | 8 | 87 | 13 | 89 | 1.23e-31 | 106 |
| MsG0480021381.01.T01 | AT2G21210 | 62.162 | 74 | 26 | 1 | 17 | 88 | 22 | 95 | 1.24e-31 | 106 |
| MsG0480021381.01.T01 | AT5G18060 | 59.259 | 81 | 28 | 2 | 8 | 87 | 13 | 89 | 2.48e-31 | 105 |
| MsG0480021381.01.T01 | AT2G21210 | 62.162 | 74 | 26 | 1 | 17 | 88 | 89 | 162 | 5.78e-31 | 107 |
| MsG0480021381.01.T01 | AT5G18030 | 58.025 | 81 | 27 | 2 | 8 | 87 | 13 | 87 | 1.02e-30 | 104 |
| MsG0480021381.01.T01 | AT5G18010 | 58.667 | 75 | 30 | 1 | 14 | 87 | 15 | 89 | 1.34e-30 | 103 |
| MsG0480021381.01.T01 | AT4G34810 | 70.000 | 70 | 16 | 2 | 23 | 87 | 48 | 117 | 1.36e-30 | 104 |
| MsG0480021381.01.T01 | AT4G38825 | 59.459 | 74 | 29 | 1 | 15 | 87 | 15 | 88 | 2.35e-30 | 103 |
| MsG0480021381.01.T01 | AT2G21200 | 62.500 | 72 | 26 | 1 | 17 | 87 | 15 | 86 | 2.52e-30 | 103 |
| MsG0480021381.01.T01 | AT4G34770 | 65.823 | 79 | 25 | 1 | 12 | 88 | 24 | 102 | 7.68e-30 | 102 |
| MsG0480021381.01.T01 | AT4G34800 | 56.977 | 86 | 32 | 2 | 1 | 83 | 1 | 84 | 7.94e-30 | 102 |
| MsG0480021381.01.T01 | AT3G03820 | 52.809 | 89 | 39 | 1 | 2 | 87 | 6 | 94 | 6.21e-28 | 97.4 |
| MsG0480021381.01.T01 | AT4G38850 | 59.420 | 69 | 25 | 1 | 22 | 87 | 20 | 88 | 6.56e-28 | 97.1 |
| MsG0480021381.01.T01 | AT3G03840 | 60.563 | 71 | 26 | 1 | 19 | 87 | 23 | 93 | 8.57e-28 | 97.1 |
| MsG0480021381.01.T01 | AT4G34780 | 63.889 | 72 | 23 | 1 | 21 | 89 | 26 | 97 | 8.00e-27 | 94.7 |
| MsG0480021381.01.T01 | AT3G03850 | 65.152 | 66 | 21 | 1 | 24 | 87 | 26 | 91 | 1.08e-26 | 94.0 |
| MsG0480021381.01.T01 | AT3G03830 | 59.420 | 69 | 25 | 1 | 22 | 87 | 23 | 91 | 1.80e-25 | 90.9 |
| MsG0480021381.01.T01 | AT4G13790 | 49.315 | 73 | 35 | 1 | 17 | 87 | 19 | 91 | 3.91e-25 | 90.1 |
| MsG0480021381.01.T01 | AT4G34790 | 63.077 | 65 | 22 | 1 | 23 | 85 | 39 | 103 | 5.10e-25 | 90.5 |
| MsG0480021381.01.T01 | AT4G38860 | 60.000 | 65 | 26 | 0 | 21 | 85 | 38 | 102 | 6.47e-24 | 87.4 |
| MsG0480021381.01.T01 | AT2G21220 | 47.778 | 90 | 39 | 2 | 5 | 87 | 15 | 103 | 1.48e-22 | 84.0 |
| MsG0480021381.01.T01 | AT1G75580 | 59.701 | 67 | 26 | 1 | 21 | 87 | 42 | 107 | 2.87e-22 | 83.6 |
| MsG0480021381.01.T01 | AT4G34760 | 47.778 | 90 | 37 | 2 | 5 | 85 | 16 | 104 | 5.38e-22 | 82.8 |
| MsG0480021381.01.T01 | AT4G36110 | 47.674 | 86 | 39 | 2 | 5 | 85 | 17 | 101 | 1.18e-19 | 76.6 |
| MsG0480021381.01.T01 | AT2G16580 | 45.455 | 88 | 37 | 2 | 8 | 85 | 19 | 105 | 1.91e-19 | 76.3 |
| MsG0480021381.01.T01 | AT1G19830 | 58.824 | 68 | 26 | 2 | 21 | 87 | 46 | 112 | 2.38e-19 | 76.3 |
| MsG0480021381.01.T01 | AT2G18010 | 50.000 | 72 | 35 | 1 | 14 | 85 | 39 | 109 | 7.28e-18 | 72.4 |
| MsG0480021381.01.T01 | AT3G43120 | 55.932 | 59 | 25 | 1 | 22 | 80 | 78 | 135 | 8.59e-18 | 73.6 |
| MsG0480021381.01.T01 | AT3G20220 | 53.846 | 65 | 28 | 2 | 23 | 86 | 47 | 110 | 2.98e-17 | 70.9 |
| MsG0480021381.01.T01 | AT5G20810 | 57.627 | 59 | 24 | 1 | 22 | 80 | 78 | 135 | 6.54e-17 | 71.2 |
| MsG0480021381.01.T01 | AT2G37030 | 53.968 | 63 | 28 | 1 | 22 | 84 | 48 | 109 | 1.23e-16 | 69.3 |
| MsG0480021381.01.T01 | AT5G20810 | 57.627 | 59 | 24 | 1 | 22 | 80 | 78 | 135 | 1.26e-16 | 70.9 |
| MsG0480021381.01.T01 | AT5G66260 | 42.391 | 92 | 47 | 2 | 2 | 88 | 8 | 98 | 5.13e-16 | 67.4 |
| MsG0480021381.01.T01 | AT3G51200 | 50.794 | 63 | 29 | 2 | 22 | 83 | 38 | 99 | 4.86e-15 | 65.1 |
| MsG0480021381.01.T01 | AT3G53250 | 44.595 | 74 | 35 | 2 | 11 | 84 | 42 | 109 | 5.49e-15 | 65.5 |
| MsG0480021381.01.T01 | AT1G75590 | 45.238 | 84 | 38 | 3 | 4 | 80 | 16 | 98 | 7.68e-15 | 65.5 |
| MsG0480021381.01.T01 | AT3G53250 | 44.595 | 74 | 35 | 2 | 11 | 84 | 73 | 140 | 9.01e-15 | 65.5 |
| MsG0480021381.01.T01 | AT5G10990 | 46.479 | 71 | 37 | 1 | 10 | 80 | 28 | 97 | 1.71e-14 | 64.7 |
| MsG0480021381.01.T01 | AT1G19840 | 44.578 | 83 | 39 | 2 | 4 | 80 | 16 | 97 | 2.02e-14 | 64.7 |
| MsG0480021381.01.T01 | AT3G61900 | 45.070 | 71 | 35 | 2 | 22 | 89 | 29 | 98 | 2.68e-14 | 63.9 |
| MsG0480021381.01.T01 | AT4G34750 | 43.478 | 69 | 38 | 1 | 22 | 90 | 36 | 103 | 3.78e-14 | 63.9 |
| MsG0480021381.01.T01 | AT4G34750 | 43.478 | 69 | 38 | 1 | 22 | 90 | 36 | 103 | 3.78e-14 | 63.9 |
| MsG0480021381.01.T01 | AT2G45210 | 40.541 | 74 | 40 | 2 | 18 | 88 | 74 | 146 | 2.06e-13 | 62.0 |
| MsG0480021381.01.T01 | AT4G12410 | 44.928 | 69 | 34 | 2 | 23 | 88 | 76 | 143 | 2.79e-13 | 61.6 |
| MsG0480021381.01.T01 | AT2G46690 | 44.928 | 69 | 34 | 2 | 15 | 80 | 16 | 83 | 4.45e-13 | 60.5 |
| MsG0480021381.01.T01 | AT4G22620 | 39.024 | 82 | 44 | 3 | 10 | 88 | 68 | 146 | 9.12e-13 | 60.5 |
| MsG0480021381.01.T01 | AT3G60690 | 44.118 | 68 | 34 | 2 | 23 | 87 | 88 | 154 | 9.35e-13 | 60.5 |
| MsG0480021381.01.T01 | AT4G00880 | 47.826 | 69 | 33 | 2 | 23 | 89 | 28 | 95 | 1.07e-12 | 59.3 |
| MsG0480021381.01.T01 | AT4G31320 | 50.820 | 61 | 29 | 1 | 23 | 83 | 80 | 139 | 1.28e-12 | 60.5 |
| MsG0480021381.01.T01 | AT2G24400 | 52.459 | 61 | 28 | 1 | 23 | 83 | 64 | 123 | 1.63e-12 | 60.1 |
| MsG0480021381.01.T01 | AT3G12830 | 40.506 | 79 | 43 | 2 | 9 | 87 | 39 | 113 | 4.54e-12 | 58.2 |
| MsG0480021381.01.T01 | AT3G09870 | 49.231 | 65 | 30 | 2 | 14 | 76 | 36 | 99 | 1.40e-11 | 56.2 |
| MsG0480021381.01.T01 | AT5G03310 | 46.269 | 67 | 31 | 2 | 22 | 83 | 38 | 104 | 1.72e-11 | 56.2 |
| MsG0480021381.01.T01 | AT2G36210 | 34.615 | 78 | 51 | 0 | 8 | 85 | 39 | 116 | 2.46e-11 | 56.2 |
| MsG0480021381.01.T01 | AT5G53590 | 41.791 | 67 | 33 | 2 | 22 | 83 | 45 | 110 | 9.77e-11 | 54.7 |
Find 26 sgRNAs with CRISPR-Local
Find 26 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGGTTTAAGTATGATAT+TGG | 0.286782 | 4:-57272070 | None:intergenic |
| AATTTCCTCTCCCACATATA+CGG | 0.318798 | 4:-57272032 | None:intergenic |
| GTTGGTTTAAGTATGATATT+GGG | 0.370306 | 4:-57272069 | None:intergenic |
| GATGCCCTTGTGATGATAAC+AGG | 0.390427 | 4:-57271962 | None:intergenic |
| CCACACCCTTTGAAGATGCT+TGG | 0.454529 | 4:-57271988 | None:intergenic |
| GGGATATCTTGCCGTATATG+TGG | 0.487155 | 4:+57272021 | MsG0480021381.01.T01:CDS |
| TTCAGCAGTTCTTGAAATGA+TGG | 0.497296 | 4:-57272091 | None:intergenic |
| TTCGAATATGATCATCCAAT+GGG | 0.511444 | 4:+57272130 | MsG0480021381.01.T01:CDS |
| CCAAGCATCTTCAAAGGGTG+TGG | 0.518182 | 4:+57271988 | MsG0480021381.01.T01:CDS |
| GCAGTTCTTGAAATGATGGT+TGG | 0.526801 | 4:-57272087 | None:intergenic |
| AAAGGGTGTGGATGTGCCAA+AGG | 0.536562 | 4:+57272000 | MsG0480021381.01.T01:CDS |
| ATTCGAATATGATCATCCAA+TGG | 0.544520 | 4:+57272129 | MsG0480021381.01.T01:CDS |
| ATCAAACCAAGCATCTTCAA+AGG | 0.547858 | 4:+57271982 | MsG0480021381.01.T01:CDS |
| ATATCACTTCTCGCTTGAGT+AGG | 0.558383 | 4:+57272191 | MsG0480021381.01.T01:CDS |
| TATACGGCAAGATATCCCTT+TGG | 0.566418 | 4:-57272016 | None:intergenic |
| TCAAACCAAGCATCTTCAAA+GGG | 0.571970 | 4:+57271983 | MsG0480021381.01.T01:CDS |
| TCTTGCCGTATATGTGGGAG+AGG | 0.580806 | 4:+57272027 | MsG0480021381.01.T01:CDS |
| GGATATCTTGCCGTATATGT+GGG | 0.581962 | 4:+57272022 | MsG0480021381.01.T01:CDS |
| GTTTACCTGTTATCATCACA+AGG | 0.599022 | 4:+57271957 | MsG0480021381.01.T01:CDS |
| AAGAACACATCTTCTCTGCA+TGG | 0.602229 | 4:-57272166 | None:intergenic |
| GGAATAGTGAGACCACCCAT+TGG | 0.603922 | 4:-57272145 | None:intergenic |
| AAGGGTGTGGATGTGCCAAA+GGG | 0.608749 | 4:+57272001 | MsG0480021381.01.T01:CDS |
| AGAACTGCTGAATCAAGCTG+AGG | 0.650449 | 4:+57272102 | MsG0480021381.01.T01:CDS |
| GAATATGATCATCCAATGGG+TGG | 0.654072 | 4:+57272133 | MsG0480021381.01.T01:CDS |
| TTTACCTGTTATCATCACAA+GGG | 0.671036 | 4:+57271958 | MsG0480021381.01.T01:CDS |
| ATGTGGGAGAGGAAATTAAG+CGG | 0.692919 | 4:+57272038 | MsG0480021381.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTGGTTTAAGTATGATATT+GGG | - | Chr4:57272072-57272091 | None:intergenic | 25.0% |
| ATTCGAATATGATCATCCAA+TGG | + | Chr4:57272129-57272148 | MsG0480021381.01.T01:CDS | 30.0% | |
| TTCGAATATGATCATCCAAT+GGG | + | Chr4:57272130-57272149 | MsG0480021381.01.T01:CDS | 30.0% | |
| TTTACCTGTTATCATCACAA+GGG | + | Chr4:57271958-57271977 | MsG0480021381.01.T01:CDS | 30.0% | |
| !! | GGTTGGTTTAAGTATGATAT+TGG | - | Chr4:57272073-57272092 | None:intergenic | 30.0% |
| AATTTCCTCTCCCACATATA+CGG | - | Chr4:57272035-57272054 | None:intergenic | 35.0% | |
| ATCAAACCAAGCATCTTCAA+AGG | + | Chr4:57271982-57272001 | MsG0480021381.01.T01:CDS | 35.0% | |
| GTTTACCTGTTATCATCACA+AGG | + | Chr4:57271957-57271976 | MsG0480021381.01.T01:CDS | 35.0% | |
| TCAAACCAAGCATCTTCAAA+GGG | + | Chr4:57271983-57272002 | MsG0480021381.01.T01:CDS | 35.0% | |
| TTCAGCAGTTCTTGAAATGA+TGG | - | Chr4:57272094-57272113 | None:intergenic | 35.0% | |
| AAGAACACATCTTCTCTGCA+TGG | - | Chr4:57272169-57272188 | None:intergenic | 40.0% | |
| ATATCACTTCTCGCTTGAGT+AGG | + | Chr4:57272191-57272210 | MsG0480021381.01.T01:CDS | 40.0% | |
| ATGTGGGAGAGGAAATTAAG+CGG | + | Chr4:57272038-57272057 | MsG0480021381.01.T01:CDS | 40.0% | |
| GAATATGATCATCCAATGGG+TGG | + | Chr4:57272133-57272152 | MsG0480021381.01.T01:CDS | 40.0% | |
| GCAGTTCTTGAAATGATGGT+TGG | - | Chr4:57272090-57272109 | None:intergenic | 40.0% | |
| GGATATCTTGCCGTATATGT+GGG | + | Chr4:57272022-57272041 | MsG0480021381.01.T01:CDS | 40.0% | |
| TATACGGCAAGATATCCCTT+TGG | - | Chr4:57272019-57272038 | None:intergenic | 40.0% | |
| AGAACTGCTGAATCAAGCTG+AGG | + | Chr4:57272102-57272121 | MsG0480021381.01.T01:CDS | 45.0% | |
| GATGCCCTTGTGATGATAAC+AGG | - | Chr4:57271965-57271984 | None:intergenic | 45.0% | |
| GGGATATCTTGCCGTATATG+TGG | + | Chr4:57272021-57272040 | MsG0480021381.01.T01:CDS | 45.0% | |
| CCAAGCATCTTCAAAGGGTG+TGG | + | Chr4:57271988-57272007 | MsG0480021381.01.T01:CDS | 50.0% | |
| GGAATAGTGAGACCACCCAT+TGG | - | Chr4:57272148-57272167 | None:intergenic | 50.0% | |
| TCTTGCCGTATATGTGGGAG+AGG | + | Chr4:57272027-57272046 | MsG0480021381.01.T01:CDS | 50.0% | |
| ! | AAAGGGTGTGGATGTGCCAA+AGG | + | Chr4:57272000-57272019 | MsG0480021381.01.T01:CDS | 50.0% |
| ! | AAGGGTGTGGATGTGCCAAA+GGG | + | Chr4:57272001-57272020 | MsG0480021381.01.T01:CDS | 50.0% |
| ! | CCACACCCTTTGAAGATGCT+TGG | - | Chr4:57271991-57272010 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr4 | gene | 57271947 | 57272219 | 57271947 | ID=MsG0480021381.01;Name=MsG0480021381.01 |
| Chr4 | mRNA | 57271947 | 57272219 | 57271947 | ID=MsG0480021381.01.T01;Parent=MsG0480021381.01;Name=MsG0480021381.01.T01;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|1|1|0|90 |
| Chr4 | exon | 57271947 | 57272219 | 57271947 | ID=MsG0480021381.01.T01:exon:7187;Parent=MsG0480021381.01.T01 |
| Chr4 | CDS | 57271947 | 57272219 | 57271947 | ID=MsG0480021381.01.T01:cds;Parent=MsG0480021381.01.T01 |
| Gene Sequence |
| Protein sequence |
