AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0280006634.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006634.01.T01 MTR_2g012570 79.534 386 40 6 8 393 56 402 0.0 594
MsG0280006634.01.T01 MTR_2g012570 79.534 386 40 6 8 393 30 376 0.0 593
MsG0280006634.01.T01 MTR_2g012570 78.012 332 36 5 8 339 56 350 1.02e-178 501
MsG0280006634.01.T01 MTR_2g012570 78.012 332 36 5 8 339 30 324 1.13e-178 500
MsG0280006634.01.T01 MTR_4g090465 63.836 365 77 7 22 383 420 732 7.23e-153 449
MsG0280006634.01.T01 MTR_1g078290 45.833 360 142 8 30 383 79 391 3.61e-102 308
MsG0280006634.01.T01 MTR_2g005330 45.787 356 144 7 30 385 80 386 1.87e-99 301
MsG0280006634.01.T01 MTR_2g005330 53.903 269 100 4 30 298 80 324 9.73e-94 285
MsG0280006634.01.T01 MTR_1g078290 50.916 273 107 5 30 298 79 328 8.88e-92 281
MsG0280006634.01.T01 MTR_1g078290 50.916 273 107 5 30 298 79 328 1.56e-91 281
MsG0280006634.01.T01 MTR_2g005330 47.917 288 106 4 98 385 1 244 1.46e-86 263
MsG0280006634.01.T01 MTR_1g078290 49.421 259 104 5 30 284 79 314 6.33e-83 256
MsG0280006634.01.T01 MTR_7g033300 42.321 293 131 9 7 298 74 329 6.65e-65 212
MsG0280006634.01.T01 MTR_3g086610 45.185 270 114 10 30 298 102 338 3.29e-64 209
MsG0280006634.01.T01 MTR_3g086610 45.185 270 114 10 30 298 102 338 9.78e-64 209
MsG0280006634.01.T01 MTR_8g089815 43.071 267 120 8 32 298 103 337 1.12e-61 204
MsG0280006634.01.T01 MTR_2g094650 41.007 278 131 8 23 299 91 336 1.43e-59 198
MsG0280006634.01.T01 MTR_8g089820 43.284 268 118 9 32 298 95 329 1.90e-59 198
MsG0280006634.01.T01 MTR_2g094650 41.007 278 130 9 23 299 91 335 3.03e-58 195
MsG0280006634.01.T01 MTR_4g058800 40.942 276 129 9 24 298 75 317 2.50e-55 186
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0280006634.01.T01 AT1G61240 60.215 372 104 7 19 386 2 333 6.49e-149 426
MsG0280006634.01.T01 AT1G61240 60.215 372 104 7 19 386 69 400 6.08e-148 426
MsG0280006634.01.T01 AT1G61240 60.215 372 104 7 19 386 69 400 6.08e-148 426
MsG0280006634.01.T01 AT1G61240 60.215 372 104 7 19 386 69 400 6.08e-148 426
MsG0280006634.01.T01 AT1G61240 60.215 372 104 7 19 386 69 400 6.08e-148 426
MsG0280006634.01.T01 AT1G61240 60.215 372 104 7 19 386 69 400 6.08e-148 426
MsG0280006634.01.T01 AT1G61240 60.215 372 104 7 19 386 69 400 6.08e-148 426
MsG0280006634.01.T01 AT1G11170 58.402 363 111 5 19 381 72 394 5.28e-147 424
MsG0280006634.01.T01 AT1G11170 58.402 363 111 5 19 381 72 394 5.28e-147 424
MsG0280006634.01.T01 AT1G11170 58.402 363 111 5 19 381 72 394 5.28e-147 424
MsG0280006634.01.T01 AT1G11170 58.402 363 111 5 19 381 72 394 5.28e-147 424
MsG0280006634.01.T01 AT1G11170 66.548 281 71 4 19 299 72 329 3.52e-132 383
MsG0280006634.01.T01 AT1G11170 66.548 281 71 4 19 299 72 329 3.52e-132 383
MsG0280006634.01.T01 AT1G11170 66.548 281 71 4 19 299 72 329 4.90e-132 384
MsG0280006634.01.T01 AT1G61240 67.260 281 69 4 19 299 69 326 7.72e-130 377
MsG0280006634.01.T01 AT1G11170 66.415 265 66 4 19 283 72 313 8.27e-122 356
MsG0280006634.01.T01 AT4G12840 48.305 354 140 8 32 383 82 394 4.43e-105 315
MsG0280006634.01.T01 AT4G12840 48.305 354 140 8 32 383 82 394 4.83e-105 315
MsG0280006634.01.T01 AT4G18530 45.198 354 154 6 30 382 70 384 3.53e-102 308
MsG0280006634.01.T01 AT4G18530 45.198 354 154 6 30 382 75 389 5.07e-102 308
MsG0280006634.01.T01 AT4G12840 47.801 341 135 8 45 383 1 300 4.08e-99 297
MsG0280006634.01.T01 AT1G11170 71.739 184 48 1 19 202 72 251 1.17e-92 279
MsG0280006634.01.T01 AT4G18530 51.969 254 98 5 30 283 75 304 2.91e-84 259
MsG0280006634.01.T01 AT1G67850 46.442 267 111 8 32 298 91 325 2.18e-64 211
MsG0280006634.01.T01 AT1G67850 46.442 267 111 8 32 298 107 341 5.84e-64 210
MsG0280006634.01.T01 AT1G67850 46.442 267 111 8 32 298 107 341 5.84e-64 210
MsG0280006634.01.T01 AT1G67850 46.442 267 111 8 32 298 107 341 5.84e-64 210
MsG0280006634.01.T01 AT1G67850 46.442 267 111 8 32 298 107 341 5.84e-64 210
MsG0280006634.01.T01 AT1G67850 46.442 267 111 8 32 298 107 341 5.84e-64 210
MsG0280006634.01.T01 AT1G67850 46.442 267 111 8 32 298 107 341 5.84e-64 210
MsG0280006634.01.T01 AT1G08040 45.353 269 113 10 32 299 90 325 1.81e-62 205
MsG0280006634.01.T01 AT1G08040 45.353 269 113 10 32 299 94 329 2.28e-62 205
MsG0280006634.01.T01 AT1G08040 45.353 269 113 10 32 299 94 329 2.28e-62 205
MsG0280006634.01.T01 AT1G08040 45.353 269 113 10 32 299 94 329 2.28e-62 205
MsG0280006634.01.T01 AT1G24570 45.353 269 113 10 32 298 83 319 9.03e-61 201
MsG0280006634.01.T01 AT1G24570 45.353 269 113 10 32 298 90 326 1.30e-60 201
MsG0280006634.01.T01 AT3G27470 40.217 276 133 8 23 298 94 337 7.65e-60 199
MsG0280006634.01.T01 AT3G27470 40.217 276 133 8 23 298 94 337 7.65e-60 199
MsG0280006634.01.T01 AT3G27470 40.217 276 133 8 23 298 94 337 7.65e-60 199
MsG0280006634.01.T01 AT3G27470 40.217 276 133 8 23 298 94 337 7.65e-60 199
MsG0280006634.01.T01 AT3G27470 40.217 276 133 8 23 298 94 337 1.02e-59 199
MsG0280006634.01.T01 AT2G28310 43.284 268 118 10 32 298 87 321 1.93e-59 197
MsG0280006634.01.T01 AT2G28310 43.284 268 118 10 32 298 87 321 1.93e-59 197
MsG0280006634.01.T01 AT2G28310 43.284 268 118 10 32 298 87 321 1.93e-59 197
MsG0280006634.01.T01 AT1G13000 43.866 269 117 10 32 299 111 346 3.72e-59 197
MsG0280006634.01.T01 AT1G13000 43.866 269 117 10 32 299 111 346 3.72e-59 197
MsG0280006634.01.T01 AT1G13000 43.866 269 117 10 32 299 111 346 3.72e-59 197
MsG0280006634.01.T01 AT1G13000 43.866 269 117 10 32 299 111 346 3.72e-59 197
MsG0280006634.01.T01 AT3G26440 43.123 269 120 10 32 299 77 313 3.13e-58 194
MsG0280006634.01.T01 AT3G26440 43.123 269 120 10 32 299 101 337 4.14e-58 194
MsG0280006634.01.T01 AT3G26440 43.123 269 120 10 32 299 101 337 4.14e-58 194
MsG0280006634.01.T01 AT3G26440 43.123 269 120 10 32 299 101 337 4.61e-58 194
MsG0280006634.01.T01 AT3G26440 43.123 269 120 10 32 299 124 360 7.42e-58 194
MsG0280006634.01.T01 AT3G26440 43.123 269 120 10 32 299 124 360 8.08e-58 194
MsG0280006634.01.T01 AT1G13000 43.874 253 109 9 32 283 111 331 5.52e-56 187
MsG0280006634.01.T01 AT2G25905 57.500 120 45 2 64 182 113 227 1.29e-40 144

Find 107 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGACAAGAAATGGAGTTTA+TGG 0.185639 2:-4337950 MsG0280006634.01.T01:CDS
TTTATGATTATATCTTTCTT+TGG 0.260491 2:-4337003 MsG0280006634.01.T01:CDS
ATCAAAATAGTCCATGTTCT+TGG 0.311996 2:-4335779 MsG0280006634.01.T01:intron
AATACAAGATAGTTCAGATT+TGG 0.315256 2:-4337694 MsG0280006634.01.T01:CDS
TTTCTTTGGGATGAGGATTT+AGG 0.326673 2:-4336989 MsG0280006634.01.T01:CDS
TTATGATTATATCTTTCTTT+GGG 0.340643 2:-4337002 MsG0280006634.01.T01:CDS
TAGCTACAAATACAAAATTA+TGG 0.342575 2:+4334594 None:intergenic
TCAAGAGACGCATTAGAAAA+TGG 0.343470 2:-4334786 MsG0280006634.01.T01:CDS
AAAATTATGGCTATAAATAA+AGG 0.344212 2:+4334607 None:intergenic
AATTGTGAAGGAAGAAGGTT+TGG 0.352238 2:-4336859 MsG0280006634.01.T01:CDS
TGATGTATCTCTGTTGAATT+CGG 0.359205 2:+4336813 None:intergenic
CAACCAAGCTAGCCTGTGTT+TGG 0.368111 2:+4334664 None:intergenic
GCTATCAGATTGACAAGAAA+TGG 0.371613 2:-4337959 MsG0280006634.01.T01:CDS
ATCCATGGACAAGGTCATTC+TGG 0.379436 2:+4335714 None:intergenic
TGACAAGAAATGGAGTTTAT+GGG 0.381782 2:-4337949 MsG0280006634.01.T01:CDS
GTTAAAATTGTGAAGGAAGA+AGG 0.385190 2:-4336864 MsG0280006634.01.T01:CDS
TTTCTAATGCGTCTCTTGAA+TGG 0.388046 2:+4334790 None:intergenic
CATCCACATTCCCGTCATAA+TGG 0.392933 2:+4337329 None:intergenic
TTATTCTAATCGTAACTTGC+TGG 0.395887 2:-4337515 MsG0280006634.01.T01:CDS
TGTGGTTGAGAAGTAATTCT+AGG 0.406115 2:-4337659 MsG0280006634.01.T01:CDS
AGTGAAGGGCCGCCATGCAC+TGG 0.406203 2:-4336628 MsG0280006634.01.T01:CDS
ATAGTCAATATGTGTTCATA+AGG 0.415722 2:-4335400 MsG0280006634.01.T01:CDS
GCCTTTCAATTTCTCTGAAG+TGG 0.429965 2:+4337731 None:intergenic
ACCTCAGATCGAACATCAAC+GGG 0.438949 2:+4335012 None:intergenic
ATATACTAAAGCTTCTTTCA+CGG 0.439842 2:-4334636 MsG0280006634.01.T01:three_prime_UTR
TGTCAATGCCATGGTGCAAA+AGG 0.446139 2:-4337461 MsG0280006634.01.T01:CDS
ACTCTGGGTGGGAGCGGTCA+TGG 0.452686 2:-4335369 MsG0280006634.01.T01:CDS
GATGTATCTCTGTTGAATTC+GGG 0.456255 2:+4336814 None:intergenic
TAGTCCATGTTCTTGGTAGT+TGG 0.458638 2:-4335772 MsG0280006634.01.T01:CDS
ATAGGAAGAACAAGGAAAGA+AGG 0.459604 2:+4334471 None:intergenic
TTATATCTTTCTTTGGGATG+AGG 0.475151 2:-4336996 MsG0280006634.01.T01:CDS
CTCCAGAATGACCTTGTCCA+TGG 0.476154 2:-4335716 MsG0280006634.01.T01:CDS
TCATAAGGGAATACAGACTC+TGG 0.485885 2:-4335385 MsG0280006634.01.T01:CDS
AGAATGACCTTGTCCATGGA+TGG 0.487677 2:-4335712 MsG0280006634.01.T01:CDS
CGATCTGCATGTATTGTACA+TGG 0.491639 2:-4335976 MsG0280006634.01.T01:CDS
ATGGCTATAAATAAAGGTAA+TGG 0.495976 2:+4334613 None:intergenic
AAGTTAACGAAGCTAATATA+CGG 0.497098 2:+4335321 None:intergenic
GTTGAATTCGGGTCAAGAGC+TGG 0.498857 2:+4336825 None:intergenic
ATACAACTTGTGTAGGTTTG+TGG 0.504860 2:-4336021 MsG0280006634.01.T01:intron
GTGTAGGTTTGTGGAAGGTA+TGG 0.505494 2:-4336012 MsG0280006634.01.T01:intron
TTGTACATGGCATCTCATAC+AGG 0.507567 2:-4335963 MsG0280006634.01.T01:intron
ACATGCAGATCGAGAGAAAA+CGG 0.509787 2:+4335987 None:intergenic
AATCCAAACACAGGCTAGCT+TGG 0.513984 2:-4334667 MsG0280006634.01.T01:three_prime_UTR
TCATAAATAGAAACTATATC+CGG 0.514990 2:+4337019 None:intergenic
ACCACTTCAGAGAAATTGAA+AGG 0.517850 2:-4337732 MsG0280006634.01.T01:CDS
ATACAGACTCTGGGTGGGAG+CGG 0.519104 2:-4335375 MsG0280006634.01.T01:CDS
AATGACCTTGTCCATGGATG+GGG 0.523126 2:-4335710 MsG0280006634.01.T01:CDS
GCAGAAGAGTCTATGAGCGC+AGG 0.527263 2:-4336675 MsG0280006634.01.T01:intron
GTGAAGGGCCGCCATGCACT+GGG 0.532061 2:-4336627 MsG0280006634.01.T01:intron
TCATATCCATTCCCCATCCA+TGG 0.536469 2:+4335699 None:intergenic
ATGGATGGTGGAATCTTGAC+TGG 0.538789 2:-4337309 MsG0280006634.01.T01:CDS
GAGAAGTAATTCTAGGTCAA+AGG 0.539594 2:-4337652 MsG0280006634.01.T01:intron
CGTGTGAATGCACGGTGGGA+AGG 0.541146 2:+4334721 None:intergenic
ACGGGAATGTGGATGGATGG+TGG 0.541381 2:-4337321 MsG0280006634.01.T01:CDS
GAATGACCTTGTCCATGGAT+GGG 0.541951 2:-4335711 MsG0280006634.01.T01:CDS
CTTCCCACCGTGCATTCACA+CGG 0.543839 2:-4334720 MsG0280006634.01.T01:three_prime_UTR
TAGTCAATATGTGTTCATAA+GGG 0.549330 2:-4335399 MsG0280006634.01.T01:CDS
GACAAGAAATGGAGTTTATG+GGG 0.554392 2:-4337948 MsG0280006634.01.T01:CDS
CATTATGACGGGAATGTGGA+TGG 0.560785 2:-4337328 MsG0280006634.01.T01:CDS
GTTGGTACGAAGCTAGCAAA+AGG 0.566678 2:+4334693 None:intergenic
CAGAAGAGTCTATGAGCGCA+GGG 0.566869 2:-4336674 MsG0280006634.01.T01:CDS
CCTTGTCCATGGATGGGGAA+TGG 0.569102 2:-4335705 MsG0280006634.01.T01:CDS
AAAGTATAATGTCAATGCCA+TGG 0.569356 2:-4337470 MsG0280006634.01.T01:CDS
TGGGGAATGGATATGAAACT+AGG 0.570310 2:-4335692 MsG0280006634.01.T01:CDS
TTGAAGTCTTCAAAGAACGC+TGG 0.570660 2:-4334849 MsG0280006634.01.T01:CDS
TAGGAAGAACAAGGAAAGAA+GGG 0.572733 2:+4334472 None:intergenic
CTGGAATCAAGCTATTGCTA+AGG 0.573781 2:-4334830 MsG0280006634.01.T01:CDS
AGGAGCTCCGTGTGAATGCA+CGG 0.577590 2:+4334713 None:intergenic
TACCTCAGATCGAACATCAA+CGG 0.580660 2:+4335011 None:intergenic
TTTGGTTATAGCAGAAACAA+AGG 0.581327 2:-4335039 MsG0280006634.01.T01:intron
CAGATATGTTAAAATTGTGA+AGG 0.588568 2:-4336871 MsG0280006634.01.T01:CDS
ATGAGCGCAGGGGAAGTACA+AGG 0.593941 2:-4336663 MsG0280006634.01.T01:CDS
GCTCCGTGTGAATGCACGGT+GGG 0.595119 2:+4334717 None:intergenic
GGTGTTCAGATGCAAGTGAA+GGG 0.596733 2:-4336642 MsG0280006634.01.T01:CDS
GCCTGTGTTTGGATTCACGT+TGG 0.599354 2:+4334675 None:intergenic
ACCCGTTGATGTTCGATCTG+AGG 0.599867 2:-4335013 MsG0280006634.01.T01:intron
AACTTGTGTAGGTTTGTGGA+AGG 0.601075 2:-4336017 MsG0280006634.01.T01:intron
ATTCCATTATGACGGGAATG+TGG 0.604575 2:-4337332 MsG0280006634.01.T01:CDS
AGGTGTTCAGATGCAAGTGA+AGG 0.605297 2:-4336643 MsG0280006634.01.T01:CDS
CTAGAAACAAGAAATTTCAC+AGG 0.606963 2:-4336773 MsG0280006634.01.T01:intron
CATAAGGGAATACAGACTCT+GGG 0.607149 2:-4335384 MsG0280006634.01.T01:CDS
CGGAGAGGACGAAAATACCT+TGG 0.608357 2:+4335341 None:intergenic
AGATACGAAGACAGTCAACA+TGG 0.611863 2:-4334876 MsG0280006634.01.T01:CDS
ATGACGGGAATGTGGATGGA+TGG 0.612152 2:-4337324 MsG0280006634.01.T01:CDS
TCGCTCAGAATCAGACAAAG+TGG 0.615398 2:-4337264 MsG0280006634.01.T01:intron
AGGAATGATTACCCAGTGCA+TGG 0.616589 2:+4336616 None:intergenic
AAGGGAATACAGACTCTGGG+TGG 0.616811 2:-4335381 MsG0280006634.01.T01:CDS
GAAACTAGGATATTGTGCAC+AGG 0.619437 2:-4335678 MsG0280006634.01.T01:intron
CCATTCCCCATCCATGGACA+AGG 0.628237 2:+4335705 None:intergenic
CTATCTTGTATTATATCTCG+TGG 0.628517 2:+4337705 None:intergenic
GAATCTTGACTGGAGTAGCA+AGG 0.629183 2:-4337299 MsG0280006634.01.T01:CDS
AACTTGCTGGCAATTCCAGT+CGG 0.637058 2:-4337502 MsG0280006634.01.T01:CDS
TTGGGATGAGGATTTAGGCG+TGG 0.638845 2:-4336984 MsG0280006634.01.T01:CDS
ATTTGGAGTTAAGACCATTG+TGG 0.644534 2:-4337677 MsG0280006634.01.T01:CDS
AATGCCAACTACCAAGAACA+TGG 0.646054 2:+4335768 None:intergenic
AGGGAATACAGACTCTGGGT+GGG 0.650992 2:-4335380 MsG0280006634.01.T01:CDS
AAGCATCATTCATACCTAGA+CGG 0.654042 2:+4336950 None:intergenic
GAGTTTATGGGGAAAAGCAG+AGG 0.658441 2:-4337937 MsG0280006634.01.T01:intron
GAGCGGTCATGGTGCAACCA+AGG 0.659925 2:-4335358 MsG0280006634.01.T01:CDS
GAATTACTTCTCAACCACAA+TGG 0.678904 2:+4337663 None:intergenic
TGCGTATTATAGGAAGAACA+AGG 0.685902 2:+4334463 None:intergenic
AACGAAGCTAATATACGGAG+AGG 0.689903 2:+4335326 None:intergenic
GATACGAAGACAGTCAACAT+GGG 0.692149 2:-4334875 MsG0280006634.01.T01:CDS
ACCAACGTGAATCCAAACAC+AGG 0.702190 2:-4334676 MsG0280006634.01.T01:three_prime_UTR
AGAAGAGTCTATGAGCGCAG+GGG 0.707379 2:-4336673 MsG0280006634.01.T01:CDS
AGCTCCGTGTGAATGCACGG+TGG 0.726182 2:+4334716 None:intergenic
AATGATTACCCAGTGCATGG+CGG 0.747617 2:+4336619 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATAATTGTAAAATTTC+TGG + Chr2:4333902-4333921 None:intergenic 10.0%
!! TTTAAATATAAAACTGTTAA+AGG - Chr2:4334716-4334735 MsG0280006634.01.T01:three_prime_UTR 10.0%
!!! GTTTTTTATATTCATATATA+TGG + Chr2:4335331-4335350 None:intergenic 10.0%
!! AAAATTATGGCTATAAATAA+AGG + Chr2:4336649-4336668 None:intergenic 15.0%
!! AAATTAGAAAGAAAAAAACA+AGG + Chr2:4336197-4336216 None:intergenic 15.0%
!! GCTTATTTAAAGAAAATATA+TGG - Chr2:4337469-4337488 MsG0280006634.01.T01:CDS 15.0%
!! TAAAATAAACCGTTAATTAA+CGG + Chr2:4334932-4334951 None:intergenic 15.0%
!! TTATGATTATATCTTTCTTT+GGG - Chr2:4334251-4334270 MsG0280006634.01.T01:intron 15.0%
!! TTTATGATTATATCTTTCTT+TGG - Chr2:4334250-4334269 MsG0280006634.01.T01:intron 15.0%
!!! AAATTTGTATTTTATGTTGA+TGG + Chr2:4337407-4337426 None:intergenic 15.0%
!!! AAGTTTAGATATGTATTTTT+GGG - Chr2:4334175-4334194 MsG0280006634.01.T01:intron 15.0%
!!! ACATAATTTACCTTTTTTTA+AGG - Chr2:4337769-4337788 MsG0280006634.01.T01:intron 15.0%
!!! ATTATTTTATTCCATTATGA+CGG - Chr2:4333913-4333932 MsG0280006634.01.T01:intron 15.0%
!!! ATTTATCATAATTGCATTTT+GGG + Chr2:4336820-4336839 None:intergenic 15.0%
!!! TAAGTTTAGATATGTATTTT+TGG - Chr2:4334174-4334193 MsG0280006634.01.T01:intron 15.0%
!!! TTGTTTTTTTCTTTCTAATT+TGG - Chr2:4336196-4336215 MsG0280006634.01.T01:intron 15.0%
!! AAAAAAACAAGGTGAAATTT+AGG + Chr2:4336186-4336205 None:intergenic 20.0%
!! AAACGTAGTTAATAAAAAGA+AGG + Chr2:4337803-4337822 None:intergenic 20.0%
!! AATCTACTCATAATAATACT+AGG + Chr2:4336847-4336866 None:intergenic 20.0%
!! AGAAGCTTATATTTATGTTT+AGG + Chr2:4337518-4337537 None:intergenic 20.0%
!! ATAGAAATTTGTGATTAATG+TGG - Chr2:4333408-4333427 MsG0280006634.01.T01:intron 20.0%
!! ATTATTATGAGTAGATTAGA+AGG - Chr2:4336850-4336869 MsG0280006634.01.T01:CDS 20.0%
!! ATTTAAAAGAACCTAAGAAA+TGG - Chr2:4337721-4337740 MsG0280006634.01.T01:CDS 20.0%
!! CGTTGTTAATAATCAATATT+GGG - Chr2:4336940-4336959 MsG0280006634.01.T01:intron 20.0%
!! GAAGCTTATATTTATGTTTA+GGG + Chr2:4337517-4337536 None:intergenic 20.0%
!! GGTAAATTATCCTTAAAAAA+AGG + Chr2:4337782-4337801 None:intergenic 20.0%
!! TAATGCATCAAATATGAAAA+CGG + Chr2:4333389-4333408 None:intergenic 20.0%
!! TAGCTACAAATACAAAATTA+TGG + Chr2:4336662-4336681 None:intergenic 20.0%
!! TATTGCTAAGGATAAAAATT+GGG - Chr2:4336435-4336454 MsG0280006634.01.T01:intron 20.0%
!! TCATAAATAGAAACTATATC+CGG + Chr2:4334237-4334256 None:intergenic 20.0%
!! TGTTTAAATGATATTTCGTT+AGG - Chr2:4337094-4337113 MsG0280006634.01.T01:intron 20.0%
!!! ATTTCCTTTTATGAACAATA+TGG - Chr2:4335167-4335186 MsG0280006634.01.T01:CDS 20.0%
!!! CAGTTTTATATTTAAAGTGT+TGG + Chr2:4334712-4334731 None:intergenic 20.0%
!!! CTATTTATCTATTAGTTTCA+AGG - Chr2:4337917-4337936 MsG0280006634.01.T01:intron 20.0%
!!! GATTTATCATAATTGCATTT+TGG + Chr2:4336821-4336840 None:intergenic 20.0%
!!! TACTTTTTATGATTGTACTT+AGG - Chr2:4333815-4333834 MsG0280006634.01.T01:intron 20.0%
!!! TTATTTTATTCCATTATGAC+GGG - Chr2:4333914-4333933 MsG0280006634.01.T01:intron 20.0%
!!! TTTATCATAATTGCATTTTG+GGG + Chr2:4336819-4336838 None:intergenic 20.0%
! AAAACTTAAAAAGACAACCA+CGG - Chr2:4336093-4336112 MsG0280006634.01.T01:intron 25.0%
! AAATAACCAATTTCCAGAAT+AGG + Chr2:4336278-4336297 None:intergenic 25.0%
! AAGTTAACGAAGCTAATATA+CGG + Chr2:4335935-4335954 None:intergenic 25.0%
! AATACAAGATAGTTCAGATT+TGG - Chr2:4333559-4333578 MsG0280006634.01.T01:intron 25.0%
! AATGTTACAAATGAACGTAA+CGG - Chr2:4337302-4337321 MsG0280006634.01.T01:CDS 25.0%
! ACACTTGTATATGTAATTGA+TGG - Chr2:4334142-4334161 MsG0280006634.01.T01:intron 25.0%
! ACATAAATATAAGCTTCTCT+TGG - Chr2:4337520-4337539 MsG0280006634.01.T01:CDS 25.0%
! ACATTTGATCCGTTAATTAA+CGG - Chr2:4334920-4334939 MsG0280006634.01.T01:intron 25.0%
! AGGAAATCAAAAGAATAGTA+AGG + Chr2:4335154-4335173 None:intergenic 25.0%
! ATAAAAGACGCTTAAAAATG+AGG + Chr2:4335761-4335780 None:intergenic 25.0%
! ATAGTCAATATGTGTTCATA+AGG - Chr2:4335853-4335872 MsG0280006634.01.T01:intron 25.0%
! ATATACTAAAGCTTCTTTCA+CGG - Chr2:4336617-4336636 MsG0280006634.01.T01:intron 25.0%
! ATGGCTATAAATAAAGGTAA+TGG + Chr2:4336643-4336662 None:intergenic 25.0%
! CAGATATGTTAAAATTGTGA+AGG - Chr2:4334382-4334401 MsG0280006634.01.T01:intron 25.0%
! CTATTGCTAAGGATAAAAAT+TGG - Chr2:4336434-4336453 MsG0280006634.01.T01:intron 25.0%
! GCGTTGTTAATAATCAATAT+TGG - Chr2:4336939-4336958 MsG0280006634.01.T01:intron 25.0%
! GTGCCAAGAAAAAATAAATA+GGG + Chr2:4336762-4336781 None:intergenic 25.0%
! TAAAAGACGCTTAAAAATGA+GGG + Chr2:4335760-4335779 None:intergenic 25.0%
! TAGTCAATATGTGTTCATAA+GGG - Chr2:4335854-4335873 MsG0280006634.01.T01:intron 25.0%
! TATGCCATATTGTTCATAAA+AGG + Chr2:4335174-4335193 None:intergenic 25.0%
! TTAATAATCAATATTGGGTG+AGG - Chr2:4336945-4336964 MsG0280006634.01.T01:intron 25.0%
! TTGAAACCTGCAAAAAAATT+AGG + Chr2:4336075-4336094 None:intergenic 25.0%
!! TTATCATAATTGCATTTTGG+GGG + Chr2:4336818-4336837 None:intergenic 25.0%
!!! AACTTTCCTAATTTTTTTGC+AGG - Chr2:4336066-4336085 MsG0280006634.01.T01:intron 25.0%
!!! ATTCACATTTTAGTGATGTT+AGG + Chr2:4337063-4337082 None:intergenic 25.0%
!!! CTTTTTGAGATAAGATATGT+TGG - Chr2:4336992-4337011 MsG0280006634.01.T01:CDS 25.0%
!!! TATTAACTACGTTTTGAAGT+AGG - Chr2:4337809-4337828 MsG0280006634.01.T01:intron 25.0%
!!! TCATTTTTAATAGTTTGCTG+TGG - Chr2:4336021-4336040 MsG0280006634.01.T01:intron 25.0%
!!! TTTTCGGACAATTTTTTCTA+CGG - Chr2:4335440-4335459 MsG0280006634.01.T01:intron 25.0%
AAAATTTACACAGCTTTACC+AGG + Chr2:4334672-4334691 None:intergenic 30.0%
AAAGTATAATGTCAATGCCA+TGG - Chr2:4333783-4333802 MsG0280006634.01.T01:intron 30.0%
AACTTGAATACAACTTGTGT+AGG - Chr2:4335225-4335244 MsG0280006634.01.T01:intron 30.0%
ACAGTTCCAATGAGTAAAAA+AGG + Chr2:4333478-4333497 None:intergenic 30.0%
ATATGTTATAGACGGTGAAT+TGG - Chr2:4334082-4334101 MsG0280006634.01.T01:intron 30.0%
ATCAAAATAGTCCATGTTCT+TGG - Chr2:4335474-4335493 MsG0280006634.01.T01:intron 30.0%
ATGTTACAAATGAACGTAAC+GGG - Chr2:4337303-4337322 MsG0280006634.01.T01:CDS 30.0%
CAGTAGTATACTAGTAATTC+TGG + Chr2:4335620-4335639 None:intergenic 30.0%
CTAGAAACAAGAAATTTCAC+AGG - Chr2:4334480-4334499 MsG0280006634.01.T01:three_prime_UTR 30.0%
CTATCTTGTATTATATCTCG+TGG + Chr2:4333551-4333570 None:intergenic 30.0%
GATTATGAAATTGCAGTCTA+CGG - Chr2:4333714-4333733 MsG0280006634.01.T01:intron 30.0%
GGTGCCAAGAAAAAATAAAT+AGG + Chr2:4336763-4336782 None:intergenic 30.0%
GGTTTAGGTGTATGTATAAA+GGG - Chr2:4337199-4337218 MsG0280006634.01.T01:intron 30.0%
GTCCTACCTTAAAAAAAATG+TGG + Chr2:4336918-4336937 None:intergenic 30.0%
GTTAAAATTGTGAAGGAAGA+AGG - Chr2:4334389-4334408 MsG0280006634.01.T01:intron 30.0%
TAAAAGAACCTAAGAAATGG+AGG - Chr2:4337724-4337743 MsG0280006634.01.T01:CDS 30.0%
TAACAAACCTTATGATTGCT+TGG - Chr2:4333687-4333706 MsG0280006634.01.T01:intron 30.0%
TACACTGACAATGCAAAATT+TGG - Chr2:4334805-4334824 MsG0280006634.01.T01:CDS 30.0%
TATGTTATAGACGGTGAATT+GGG - Chr2:4334083-4334102 MsG0280006634.01.T01:intron 30.0%
TGAAACTAAAAACTTTACCG+TGG + Chr2:4336113-4336132 None:intergenic 30.0%
TGACAAGAAATGGAGTTTAT+GGG - Chr2:4333304-4333323 MsG0280006634.01.T01:intron 30.0%
TGATGTATCTCTGTTGAATT+CGG + Chr2:4334443-4334462 None:intergenic 30.0%
TGGTTTAGGTGTATGTATAA+AGG - Chr2:4337198-4337217 MsG0280006634.01.T01:intron 30.0%
TTACAATCTTTGCACCAATA+CGG - Chr2:4333436-4333455 MsG0280006634.01.T01:intron 30.0%
TTGACAAGAAATGGAGTTTA+TGG - Chr2:4333303-4333322 MsG0280006634.01.T01:intron 30.0%
TTTGGTTATAGCAGAAACAA+AGG - Chr2:4336214-4336233 MsG0280006634.01.T01:intron 30.0%
! AAAGTTGCTATTACAAGAAG+CGG + Chr2:4336052-4336071 None:intergenic 30.0%
! AAGAATATTGATTGCATCGA+TGG - Chr2:4335975-4335994 MsG0280006634.01.T01:CDS 30.0%
! AGAATATTGATTGCATCGAT+GGG - Chr2:4335976-4335995 MsG0280006634.01.T01:CDS 30.0%
! CTTACAATGAATGTTTTCGT+TGG - Chr2:4334554-4334573 MsG0280006634.01.T01:three_prime_UTR 30.0%
! TGTTGTTTACTTTGCTAATG+TGG - Chr2:4336347-4336366 MsG0280006634.01.T01:intron 30.0%
! TTATTCTAATCGTAACTTGC+TGG - Chr2:4333738-4333757 MsG0280006634.01.T01:intron 30.0%
!! TACTTTTGTTTAATACCGAC+TGG + Chr2:4333769-4333788 None:intergenic 30.0%
!! TTATATCTTTCTTTGGGATG+AGG - Chr2:4334257-4334276 MsG0280006634.01.T01:intron 30.0%
!! TTTTGACCTATTCTGGAAAT+TGG - Chr2:4336269-4336288 MsG0280006634.01.T01:intron 30.0%
!!! CATGGTCCACATTTTTTTTA+AGG - Chr2:4336909-4336928 MsG0280006634.01.T01:intron 30.0%
!!! GAGATCAATGTTGTTTTTCA+GGG - Chr2:4335801-4335820 MsG0280006634.01.T01:intron 30.0%
!!! GCTCCCTATTTATTTTTTCT+TGG - Chr2:4336756-4336775 MsG0280006634.01.T01:intron 30.0%
!!! GTCCACATTTTTTTTAAGGT+AGG - Chr2:4336913-4336932 MsG0280006634.01.T01:intron 30.0%
!!! TGAGATCAATGTTGTTTTTC+AGG - Chr2:4335800-4335819 MsG0280006634.01.T01:intron 30.0%
!!! TTTCGGACAATTTTTTCTAC+GGG - Chr2:4335441-4335460 MsG0280006634.01.T01:intron 30.0%
!!! TTTTTTCTCTACAAATGCCT+CGG - Chr2:4334057-4334076 MsG0280006634.01.T01:intron 30.0%
AACCATTCCATTTGATGTGA+AGG - Chr2:4337362-4337381 MsG0280006634.01.T01:intron 35.0%
AACCTTCACATCAAATGGAA+TGG + Chr2:4337367-4337386 None:intergenic 35.0%
AAGCAGAGGTAAAAATCTCA+TGG - Chr2:4333330-4333349 MsG0280006634.01.T01:intron 35.0%
AAGCATCATTCATACCTAGA+CGG + Chr2:4334306-4334325 None:intergenic 35.0%
AATTGTGAAGGAAGAAGGTT+TGG - Chr2:4334394-4334413 MsG0280006634.01.T01:intron 35.0%
ACAAAAACAACACAAGAGCA+AGG + Chr2:4335011-4335030 None:intergenic 35.0%
ACCACTTCAGAGAAATTGAA+AGG - Chr2:4333521-4333540 MsG0280006634.01.T01:intron 35.0%
AGAATTCCACCACTTGATTT+AGG + Chr2:4335365-4335384 None:intergenic 35.0%
ATACAACTTGTGTAGGTTTG+TGG - Chr2:4335232-4335251 MsG0280006634.01.T01:intron 35.0%
ATAGGAAGAACAAGGAAAGA+AGG + Chr2:4336785-4336804 None:intergenic 35.0%
ATCATTCCTTTCTTTGAACC+TGG - Chr2:4334651-4334670 MsG0280006634.01.T01:three_prime_UTR 35.0%
ATCTACAGCAGAAGCAAAAA+TGG + Chr2:4336510-4336529 None:intergenic 35.0%
CAATGTCTCGTAAGAATGTT+AGG + Chr2:4337972-4337991 None:intergenic 35.0%
GAATTACTTCTCAACCACAA+TGG + Chr2:4333593-4333612 None:intergenic 35.0%
GAATTCCACCACTTGATTTA+GGG + Chr2:4335364-4335383 None:intergenic 35.0%
GACAAGAAATGGAGTTTATG+GGG - Chr2:4333305-4333324 MsG0280006634.01.T01:intron 35.0%
GAGAAGTAATTCTAGGTCAA+AGG - Chr2:4333601-4333620 MsG0280006634.01.T01:intron 35.0%
GATGTATCTCTGTTGAATTC+GGG + Chr2:4334442-4334461 None:intergenic 35.0%
GCTATCAGATTGACAAGAAA+TGG - Chr2:4333294-4333313 MsG0280006634.01.T01:intron 35.0%
GGTGATCGAACTAAAAAAGT+GGG - Chr2:4335822-4335841 MsG0280006634.01.T01:intron 35.0%
GTTCAAACCTTCACATCAAA+TGG + Chr2:4337372-4337391 None:intergenic 35.0%
TAGGAAGAACAAGGAAAGAA+GGG + Chr2:4336784-4336803 None:intergenic 35.0%
TATATGCATGTGCATGGATA+TGG + Chr2:4334123-4334142 None:intergenic 35.0%
TCAAGAGACGCATTAGAAAA+TGG - Chr2:4336467-4336486 MsG0280006634.01.T01:intron 35.0%
TCCGAAAATTACAAGAGACA+GGG + Chr2:4335428-4335447 None:intergenic 35.0%
TGCAAAAAGATTTCTGCATC+CGG - Chr2:4334215-4334234 MsG0280006634.01.T01:intron 35.0%
TGCATCAAATATGAAAACGG+AGG + Chr2:4333386-4333405 None:intergenic 35.0%
TGCGTATTATAGGAAGAACA+AGG + Chr2:4336793-4336812 None:intergenic 35.0%
TGTGGTTGAGAAGTAATTCT+AGG - Chr2:4333594-4333613 MsG0280006634.01.T01:intron 35.0%
TTACACTTTAGTCACTACAG+AGG + Chr2:4334833-4334852 None:intergenic 35.0%
TTGACTTTGACTCATGGTTT+AGG - Chr2:4337184-4337203 MsG0280006634.01.T01:intron 35.0%
TTTAACATATCTGCAGAAGC+AGG + Chr2:4334375-4334394 None:intergenic 35.0%
TTTCTAATGCGTCTCTTGAA+TGG + Chr2:4336466-4336485 None:intergenic 35.0%
! ATGTTGATGGAAGTTGTAGT+AGG + Chr2:4337394-4337413 None:intergenic 35.0%
! ATTTGGAGTTAAGACCATTG+TGG - Chr2:4333576-4333595 MsG0280006634.01.T01:intron 35.0%
! GGTGTATGTATAAAGGGTTT+TGG - Chr2:4337205-4337224 MsG0280006634.01.T01:intron 35.0%
! GTAAGACTTTTGACCTATTC+TGG - Chr2:4336262-4336281 MsG0280006634.01.T01:intron 35.0%
! TTGCCATCATGAAGTGATTT+TGG - Chr2:4336881-4336900 MsG0280006634.01.T01:intron 35.0%
! TTTTGTTGCTCTTCATCAAC+TGG - Chr2:4334324-4334343 MsG0280006634.01.T01:intron 35.0%
!! AAGTGTTGGCAAATTGTGAT+TGG + Chr2:4334698-4334717 None:intergenic 35.0%
!! ATCATAAGGTTTGTTAGCTC+TGG + Chr2:4333683-4333702 None:intergenic 35.0%
!! GAGGTTTTATGTAATGGAGT+TGG - Chr2:4336964-4336983 MsG0280006634.01.T01:intron 35.0%
!! GGTTATTGATTTGTAGCTGT+TGG - Chr2:4337013-4337032 MsG0280006634.01.T01:CDS 35.0%
!! GTTTTATGTAATGGAGTTGG+TGG - Chr2:4336967-4336986 MsG0280006634.01.T01:CDS 35.0%
!! TTGGGTGAGGTTTTATGTAA+TGG - Chr2:4336958-4336977 MsG0280006634.01.T01:intron 35.0%
!! TTTCTTTGGGATGAGGATTT+AGG - Chr2:4334264-4334283 MsG0280006634.01.T01:intron 35.0%
!!! AAAAAGTACCTTTTGCACCA+TGG + Chr2:4333803-4333822 None:intergenic 35.0%
!!! GTATTTTTGGGTTCTTTGTC+AGG - Chr2:4334187-4334206 MsG0280006634.01.T01:intron 35.0%
!!! TGGATGCCTTTTTTACTCAT+TGG - Chr2:4333469-4333488 MsG0280006634.01.T01:intron 35.0%
AACGAAGCTAATATACGGAG+AGG + Chr2:4335930-4335949 None:intergenic 40.0%
AACTTGTGTAGGTTTGTGGA+AGG - Chr2:4335236-4335255 MsG0280006634.01.T01:intron 40.0%
AAGAACCTAAGAAATGGAGG+AGG - Chr2:4337727-4337746 MsG0280006634.01.T01:CDS 40.0%
AAGGAAGACAGTGTAACACA+AGG + Chr2:4335135-4335154 None:intergenic 40.0%
AATGCCAACTACCAAGAACA+TGG + Chr2:4335488-4335507 None:intergenic 40.0%
ACATGCAGATCGAGAGAAAA+CGG + Chr2:4335269-4335288 None:intergenic 40.0%
ACCAATACGGTTCTGTACTT+TGG - Chr2:4333449-4333468 MsG0280006634.01.T01:intron 40.0%
AGATACGAAGACAGTCAACA+TGG - Chr2:4336377-4336396 MsG0280006634.01.T01:intron 40.0%
ATCACCACCAAGCAATCATA+AGG + Chr2:4333697-4333716 None:intergenic 40.0%
ATGTATATACCAGCTGGACT+TGG - Chr2:4335718-4335737 MsG0280006634.01.T01:CDS 40.0%
CAAACCTTATGATTGCTTGG+TGG - Chr2:4333690-4333709 MsG0280006634.01.T01:intron 40.0%
CAAGTGTATATGCATGTGCA+TGG + Chr2:4334129-4334148 None:intergenic 40.0%
CATAAGGGAATACAGACTCT+GGG - Chr2:4335869-4335888 MsG0280006634.01.T01:intron 40.0%
CCACCAAAATCACTTCATGA+TGG + Chr2:4336887-4336906 None:intergenic 40.0%
CCGAAAATTACAAGAGACAG+GGG + Chr2:4335427-4335446 None:intergenic 40.0%
CCTCGGCAATATGTTATAGA+CGG - Chr2:4334074-4334093 MsG0280006634.01.T01:intron 40.0%
CGATCTGCATGTATTGTACA+TGG - Chr2:4335277-4335296 MsG0280006634.01.T01:intron 40.0%
CTATGAATTCCTCACTTGAG+AGG - Chr2:4334963-4334982 MsG0280006634.01.T01:intron 40.0%
CTGGAATCAAGCTATTGCTA+AGG - Chr2:4336423-4336442 MsG0280006634.01.T01:intron 40.0%
GAAACTAGGATATTGTGCAC+AGG - Chr2:4335575-4335594 MsG0280006634.01.T01:intron 40.0%
GATACGAAGACAGTCAACAT+GGG - Chr2:4336378-4336397 MsG0280006634.01.T01:intron 40.0%
GCTTTACCAGGTTCAAAGAA+AGG + Chr2:4334660-4334679 None:intergenic 40.0%
GGGTGATCGAACTAAAAAAG+TGG - Chr2:4335821-4335840 MsG0280006634.01.T01:intron 40.0%
GTCCGAAAATTACAAGAGAC+AGG + Chr2:4335429-4335448 None:intergenic 40.0%
TACCTCAGATCGAACATCAA+CGG + Chr2:4336245-4336264 None:intergenic 40.0%
TACTACCTCCTCCATTTCTT+AGG + Chr2:4337735-4337754 None:intergenic 40.0%
TCATAAGGGAATACAGACTC+TGG - Chr2:4335868-4335887 MsG0280006634.01.T01:intron 40.0%
TCCAAAGTACAGAACCGTAT+TGG + Chr2:4333453-4333472 None:intergenic 40.0%
TGCATCATGTATATACCAGC+TGG - Chr2:4335712-4335731 MsG0280006634.01.T01:CDS 40.0%
TGGGGAATGGATATGAAACT+AGG - Chr2:4335561-4335580 MsG0280006634.01.T01:intron 40.0%
TTGAAGTCTTCAAAGAACGC+TGG - Chr2:4336404-4336423 MsG0280006634.01.T01:intron 40.0%
TTGTACATGGCATCTCATAC+AGG - Chr2:4335290-4335309 MsG0280006634.01.T01:intron 40.0%
TTTGGGGGATTGCGTATTAT+AGG + Chr2:4336803-4336822 None:intergenic 40.0%
! ATGTTTGATTAGAGCGCTCA+AGG - Chr2:4337159-4337178 MsG0280006634.01.T01:intron 40.0%
! ATTCCATTATGACGGGAATG+TGG - Chr2:4333921-4333940 MsG0280006634.01.T01:intron 40.0%
! CCATCATGAAGTGATTTTGG+TGG - Chr2:4336884-4336903 MsG0280006634.01.T01:intron 40.0%
! CCCCTGTCTCTTGTAATTTT+CGG - Chr2:4335424-4335443 MsG0280006634.01.T01:CDS 40.0%
! GCCTTTCAATTTCTCTGAAG+TGG + Chr2:4333525-4333544 None:intergenic 40.0%
! TAGTCCATGTTCTTGGTAGT+TGG - Chr2:4335481-4335500 MsG0280006634.01.T01:intron 40.0%
! TGGAACATTTTTCTCCGTCT+AGG - Chr2:4334289-4334308 MsG0280006634.01.T01:intron 40.0%
!! AAGGCATTGACTTTGACTCA+TGG - Chr2:4337178-4337197 MsG0280006634.01.T01:intron 40.0%
!! GAAGTGATTTTGGTGGTACA+TGG - Chr2:4336891-4336910 MsG0280006634.01.T01:intron 40.0%
!! TTGATTTGTAGCTGTTGGCT+TGG - Chr2:4337018-4337037 MsG0280006634.01.T01:CDS 40.0%
!!! ACTACGTTTTGAAGTAGGCT+TGG - Chr2:4337814-4337833 MsG0280006634.01.T01:intron 40.0%
!!! GTTGGCTTGGTTTTATTCGA+TGG - Chr2:4337031-4337050 MsG0280006634.01.T01:CDS 40.0%
!!! TTTTTGGGTTCTTTGTCAGG+TGG - Chr2:4334190-4334209 MsG0280006634.01.T01:intron 40.0%
AACATATCTGCAGAAGCAGG+AGG + Chr2:4334372-4334391 None:intergenic 45.0%
AATGACCTTGTCCATGGATG+GGG - Chr2:4335543-4335562 MsG0280006634.01.T01:intron 45.0%
AATGATTACCCAGTGCATGG+CGG + Chr2:4334637-4334656 None:intergenic 45.0%
ACCAACGTGAATCCAAACAC+AGG - Chr2:4336577-4336596 MsG0280006634.01.T01:intron 45.0%
ACCTCAGATCGAACATCAAC+GGG + Chr2:4336244-4336263 None:intergenic 45.0%
AGAATGACCTTGTCCATGGA+TGG - Chr2:4335541-4335560 MsG0280006634.01.T01:intron 45.0%
AGCTGCAACCCTAAATCAAG+TGG - Chr2:4335353-4335372 MsG0280006634.01.T01:CDS 45.0%
AGGAATGATTACCCAGTGCA+TGG + Chr2:4334640-4334659 None:intergenic 45.0%
AGGTGTTCAGATGCAAGTGA+AGG - Chr2:4334610-4334629 MsG0280006634.01.T01:three_prime_UTR 45.0%
ATCCATGGACAAGGTCATTC+TGG + Chr2:4335542-4335561 None:intergenic 45.0%
CAGTGTAACACAAGGTCACA+AGG + Chr2:4335127-4335146 None:intergenic 45.0%
CATCCACATTCCCGTCATAA+TGG + Chr2:4333927-4333946 None:intergenic 45.0%
CCGTCTATAACATATTGCCG+AGG + Chr2:4334077-4334096 None:intergenic 45.0%
GAATCTTGACTGGAGTAGCA+AGG - Chr2:4333954-4333973 MsG0280006634.01.T01:intron 45.0%
GAATGACCTTGTCCATGGAT+GGG - Chr2:4335542-4335561 MsG0280006634.01.T01:intron 45.0%
GAGTTTATGGGGAAAAGCAG+AGG - Chr2:4333316-4333335 MsG0280006634.01.T01:intron 45.0%
GCTACGAGCAACAAAGTTCT+TGG + Chr2:4335399-4335418 None:intergenic 45.0%
GGTGTTCAGATGCAAGTGAA+GGG - Chr2:4334611-4334630 MsG0280006634.01.T01:three_prime_UTR 45.0%
GTAACACAAGGTCACAAGGA+TGG + Chr2:4335123-4335142 None:intergenic 45.0%
GTGTAGGTTTGTGGAAGGTA+TGG - Chr2:4335241-4335260 MsG0280006634.01.T01:intron 45.0%
GTTGGTACGAAGCTAGCAAA+AGG + Chr2:4336563-4336582 None:intergenic 45.0%
TCATATCCATTCCCCATCCA+TGG + Chr2:4335557-4335576 None:intergenic 45.0%
TCGCTCAGAATCAGACAAAG+TGG - Chr2:4333989-4334008 MsG0280006634.01.T01:intron 45.0%
TGCAACCCTAAATCAAGTGG+TGG - Chr2:4335356-4335375 MsG0280006634.01.T01:CDS 45.0%
TGTCAATGCCATGGTGCAAA+AGG - Chr2:4333792-4333811 MsG0280006634.01.T01:intron 45.0%
! AATCCAAACACAGGCTAGCT+TGG - Chr2:4336586-4336605 MsG0280006634.01.T01:intron 45.0%
! CATTATGACGGGAATGTGGA+TGG - Chr2:4333925-4333944 MsG0280006634.01.T01:intron 45.0%
! GTTGCTATTACAAGAAGCGG+AGG + Chr2:4336049-4336068 None:intergenic 45.0%
!! AACTTGCTGGCAATTCCAGT+CGG - Chr2:4333751-4333770 MsG0280006634.01.T01:intron 45.0%
!! ATCGATGGGCTAGCTTGAAA+GGG - Chr2:4335990-4336009 MsG0280006634.01.T01:CDS 45.0%
!! ATGGATGGTGGAATCTTGAC+TGG - Chr2:4333944-4333963 MsG0280006634.01.T01:intron 45.0%
AAGGGAATACAGACTCTGGG+TGG - Chr2:4335872-4335891 MsG0280006634.01.T01:intron 50.0%
AATCCAGCTCCTCTCAAGTG+AGG + Chr2:4334975-4334994 None:intergenic 50.0%
ACCCGTTGATGTTCGATCTG+AGG - Chr2:4336240-4336259 MsG0280006634.01.T01:intron 50.0%
AGAAGAGTCTATGAGCGCAG+GGG - Chr2:4334580-4334599 MsG0280006634.01.T01:three_prime_UTR 50.0%
AGGGAATACAGACTCTGGGT+GGG - Chr2:4335873-4335892 MsG0280006634.01.T01:intron 50.0%
ATTCCTCACTTGAGAGGAGC+TGG - Chr2:4334969-4334988 MsG0280006634.01.T01:intron 50.0%
CAGAAGAGTCTATGAGCGCA+GGG - Chr2:4334579-4334598 MsG0280006634.01.T01:three_prime_UTR 50.0%
CGGAGAGGACGAAAATACCT+TGG + Chr2:4335915-4335934 None:intergenic 50.0%
CTCCAGAATGACCTTGTCCA+TGG - Chr2:4335537-4335556 MsG0280006634.01.T01:intron 50.0%
GCCTGTGTTTGGATTCACGT+TGG + Chr2:4336581-4336600 None:intergenic 50.0%
GGAACTGTCGATGTCGTTAC+AGG - Chr2:4333490-4333509 MsG0280006634.01.T01:intron 50.0%
GTAGTAAGTCCAAGTCCAGC+TGG + Chr2:4335730-4335749 None:intergenic 50.0%
GTTGAATTCGGGTCAAGAGC+TGG + Chr2:4334431-4334450 None:intergenic 50.0%
TTGGGATGAGGATTTAGGCG+TGG - Chr2:4334269-4334288 MsG0280006634.01.T01:intron 50.0%
! ATGACGGGAATGTGGATGGA+TGG - Chr2:4333929-4333948 MsG0280006634.01.T01:intron 50.0%
! CAACCAAGCTAGCCTGTGTT+TGG + Chr2:4336592-4336611 None:intergenic 50.0%
!! ACGTAACGGGCACGTTAGTA+TGG - Chr2:4337316-4337335 MsG0280006634.01.T01:CDS 50.0%
!! CATCGATGGGCTAGCTTGAA+AGG - Chr2:4335989-4336008 MsG0280006634.01.T01:CDS 50.0%
ACGGGAATGTGGATGGATGG+TGG - Chr2:4333932-4333951 MsG0280006634.01.T01:intron 55.0%
AGGAGCTCCGTGTGAATGCA+CGG + Chr2:4336543-4336562 None:intergenic 55.0%
ATACAGACTCTGGGTGGGAG+CGG - Chr2:4335878-4335897 MsG0280006634.01.T01:intron 55.0%
CCATTCCCCATCCATGGACA+AGG + Chr2:4335551-4335570 None:intergenic 55.0%
CCTTGTCCATGGATGGGGAA+TGG - Chr2:4335548-4335567 MsG0280006634.01.T01:intron 55.0%
CTTCCCACCGTGCATTCACA+CGG - Chr2:4336533-4336552 MsG0280006634.01.T01:intron 55.0%
GCAGAAGAGTCTATGAGCGC+AGG - Chr2:4334578-4334597 MsG0280006634.01.T01:three_prime_UTR 55.0%
! ATGAGCGCAGGGGAAGTACA+AGG - Chr2:4334590-4334609 MsG0280006634.01.T01:three_prime_UTR 55.0%
AGCTCCGTGTGAATGCACGG+TGG + Chr2:4336540-4336559 None:intergenic 60.0%
CGTGTGAATGCACGGTGGGA+AGG + Chr2:4336535-4336554 None:intergenic 60.0%
GAGCGGTCATGGTGCAACCA+AGG - Chr2:4335895-4335914 MsG0280006634.01.T01:intron 60.0%
GCTCCGTGTGAATGCACGGT+GGG + Chr2:4336539-4336558 None:intergenic 60.0%
ACTCTGGGTGGGAGCGGTCA+TGG - Chr2:4335884-4335903 MsG0280006634.01.T01:intron 65.0%
AGTGAAGGGCCGCCATGCAC+TGG - Chr2:4334625-4334644 MsG0280006634.01.T01:three_prime_UTR 65.0%
GTGAAGGGCCGCCATGCACT+GGG - Chr2:4334626-4334645 MsG0280006634.01.T01:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
Chr2 gene 4333278 4337997 4333278 ID=MsG0280006634.01;Name=MsG0280006634.01
Chr2 mRNA 4333278 4337997 4333278 ID=MsG0280006634.01.T01;Parent=MsG0280006634.01;Name=MsG0280006634.01.T01;_AED=0.48;_eAED=0.53;_QI=0|0.69|0.57|1|0.76|0.71|14|313|393
Chr2 exon 4333278 4333292 4333278 ID=MsG0280006634.01.T01:exon:1057;Parent=MsG0280006634.01.T01
Chr2 exon 4334473 4334896 4334473 ID=MsG0280006634.01.T01:exon:1056;Parent=MsG0280006634.01.T01
Chr2 exon 4335014 4335050 4335014 ID=MsG0280006634.01.T01:exon:1055;Parent=MsG0280006634.01.T01
Chr2 exon 4335156 4335187 4335156 ID=MsG0280006634.01.T01:exon:1054;Parent=MsG0280006634.01.T01
Chr2 exon 4335316 4335453 4335316 ID=MsG0280006634.01.T01:exon:1053;Parent=MsG0280006634.01.T01
Chr2 exon 4335679 4335791 4335679 ID=MsG0280006634.01.T01:exon:1052;Parent=MsG0280006634.01.T01
Chr2 exon 4335964 4336028 4335964 ID=MsG0280006634.01.T01:exon:1051;Parent=MsG0280006634.01.T01
Chr2 exon 4336628 4336693 4336628 ID=MsG0280006634.01.T01:exon:1050;Parent=MsG0280006634.01.T01
Chr2 exon 4336774 4336890 4336774 ID=MsG0280006634.01.T01:exon:1049;Parent=MsG0280006634.01.T01
Chr2 exon 4336965 4337066 4336965 ID=MsG0280006634.01.T01:exon:1048;Parent=MsG0280006634.01.T01
Chr2 exon 4337265 4337372 4337265 ID=MsG0280006634.01.T01:exon:1047;Parent=MsG0280006634.01.T01
Chr2 exon 4337439 4337545 4337439 ID=MsG0280006634.01.T01:exon:1046;Parent=MsG0280006634.01.T01
Chr2 exon 4337653 4337763 4337653 ID=MsG0280006634.01.T01:exon:1045;Parent=MsG0280006634.01.T01
Chr2 exon 4337938 4337997 4337938 ID=MsG0280006634.01.T01:exon:1044;Parent=MsG0280006634.01.T01
Chr2 CDS 4337938 4337997 4337938 ID=MsG0280006634.01.T01:cds;Parent=MsG0280006634.01.T01
Chr2 CDS 4337653 4337763 4337653 ID=MsG0280006634.01.T01:cds;Parent=MsG0280006634.01.T01
Chr2 CDS 4337439 4337545 4337439 ID=MsG0280006634.01.T01:cds;Parent=MsG0280006634.01.T01
Chr2 CDS 4337265 4337372 4337265 ID=MsG0280006634.01.T01:cds;Parent=MsG0280006634.01.T01
Chr2 CDS 4336965 4337066 4336965 ID=MsG0280006634.01.T01:cds;Parent=MsG0280006634.01.T01
Chr2 CDS 4336774 4336890 4336774 ID=MsG0280006634.01.T01:cds;Parent=MsG0280006634.01.T01
Chr2 CDS 4336628 4336693 4336628 ID=MsG0280006634.01.T01:cds;Parent=MsG0280006634.01.T01
Chr2 CDS 4335964 4336028 4335964 ID=MsG0280006634.01.T01:cds;Parent=MsG0280006634.01.T01
Chr2 CDS 4335679 4335791 4335679 ID=MsG0280006634.01.T01:cds;Parent=MsG0280006634.01.T01
Chr2 CDS 4335316 4335453 4335316 ID=MsG0280006634.01.T01:cds;Parent=MsG0280006634.01.T01
Chr2 CDS 4335156 4335187 4335156 ID=MsG0280006634.01.T01:cds;Parent=MsG0280006634.01.T01
Chr2 CDS 4335014 4335050 4335014 ID=MsG0280006634.01.T01:cds;Parent=MsG0280006634.01.T01
Chr2 CDS 4334771 4334896 4334771 ID=MsG0280006634.01.T01:cds;Parent=MsG0280006634.01.T01
Chr2 three_prime_UTR 4334473 4334770 4334473 ID=MsG0280006634.01.T01:three_prime_utr;Parent=MsG0280006634.01.T01
Chr2 three_prime_UTR 4333278 4333292 4333278 ID=MsG0280006634.01.T01:three_prime_utr;Parent=MsG0280006634.01.T01
Gene Sequence

>MsG0280006634.01.T01

TTGTTCGTCATCTGCTGCTATCAGATTGACAAGAAATGGAGTTTATGGGGAAAAGCAGAGGCATATTCAACCACTTCAGAGAAATTGAAAGGCTTGCCACGAGATATAATACAAGATAGTTCAGATTTGGAGTTAAGACCATTGTGGTTGAGAAGTAATTCTAGGTCAAAGTCTACGGATTATTCTAATCGTAACTTGCTGGCAATTCCAGTCGGTATTAAACAAAAGTATAATGTCAATGCCATGGTGCAAAAGGTACTTTTTATGATTGTACTTAGAAATTTTACAATTATTTTATTCCATTATGACGGGAATGTGGATGGATGGTGGAATCTTGACTGGAGTAGCAAGGCTATACACATTGTCGCTCAGAATCAGACAAAGTGGTGGTTTGCAAAAAGATTTCTGCATCCGGATATAGTTTCTATTTATGATTATATCTTTCTTTGGGATGAGGATTTAGGCGTGGAACATTTTTCTCCGTCTAGATATGTTAAAATTGTGAAGGAAGAAGGTTTGGAGATATCTCAACCAGCTCTTGACCCGAATTCAACAGAGATACATCACAGAATTACAGTTCGAGCTAGAAACAAGAAATTTCACAGAAGAGTCTATGAGCGCAGGGGAAGTACAAGGTGTTCAGATGCAAGTGAAGGGCCGCCATGCACTGGGTTTGTGGAAGGTATGGCTCCGTTTTCTCTCGATCTGCATGTATTGTACATGGCATCTCATACAGTCCATGTTCTTGGTAGTTGGCATTCGATATTTGTAACACATGATTCTGTTTTTCTCCAGAATGACCTTGTCCATGGATGGGGAATGGATATGAAACTAGGATATTGTGCACAGGGTGATCGAACTAAAAAAGTGGGTGTTGTTGATAGTCAATATGTGTTCATAAGGGAATACAGACTCTGGGTGGGAGCGGTCATGGTGCAACCAAGGTATTTTCGTCCTCTCCGTATATTAGCTTCGTTAACTTGTACTGTTTCAAAACTTAAAAAGACAACCACGGTAAACAGAAACAAAGGAGCACCCGTTGATGTTCGATCTGAGATACGAAGACAGTCAACATGGGAACTTGAAGTCTTCAAAGAACGCTGGAATCAAGCTATTGCTAAGGATAAAAATTGGGTTGATCCATTCAAGAGACGCATTAGAAAATGGCGCAGCACTCACTAA

Protein sequence

>MsG0280006634.01.T01

LFVICCYQIDKKWSLWGKAEAYSTTSEKLKGLPRDIIQDSSDLELRPLWLRSNSRSKSTDYSNRNLLAIPVGIKQKYNVNAMVQKVLFMIVLRNFTIILFHYDGNVDGWWNLDWSSKAIHIVAQNQTKWWFAKRFLHPDIVSIYDYIFLWDEDLGVEHFSPSRYVKIVKEEGLEISQPALDPNSTEIHHRITVRARNKKFHRRVYERRGSTRCSDASEGPPCTGFVEGMAPFSLDLHVLYMASHTVHVLGSWHSIFVTHDSVFLQNDLVHGWGMDMKLGYCAQGDRTKKVGVVDSQYVFIREYRLWVGAVMVQPRYFRPLRILASLTCTVSKLKKTTTVNRNKGAPVDVRSEIRRQSTWELEVFKERWNQAIAKDKNWVDPFKRRIRKWRSTH*