AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005220.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005220.01.T01 MTR_1g095360 88.378 413 33 2 290 687 384 796 0.0 748
MsG0180005220.01.T01 MTR_1g095360 54.615 260 39 6 8 267 99 279 2.47e-66 234
MsG0180005220.01.T01 MTR_1g095360 88.378 413 33 2 290 687 419 831 0.0 748
MsG0180005220.01.T01 MTR_1g095360 67.692 260 40 5 8 267 99 314 5.00e-98 321
MsG0180005220.01.T01 MTR_3g070290 30.000 370 203 10 351 688 192 537 3.35e-39 153
MsG0180005220.01.T01 MTR_3g467000 30.000 370 203 11 351 688 191 536 7.02e-39 152
MsG0180005220.01.T01 MTR_3g076770 34.894 235 139 4 459 688 314 539 8.72e-37 146
MsG0180005220.01.T01 MTR_1g114520 29.348 368 199 10 349 688 156 490 6.39e-31 128
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005220.01.T01 AT2G28880 63.592 412 135 2 291 687 460 871 5.12e-177 529
MsG0180005220.01.T01 AT2G28880 40.449 267 104 8 7 267 103 320 2.71e-38 153
MsG0180005220.01.T01 AT2G29690 30.226 354 223 9 351 688 198 543 1.01e-40 158
MsG0180005220.01.T01 AT5G05730 29.787 376 220 11 339 688 173 530 5.02e-37 147
MsG0180005220.01.T01 AT3G55870 29.526 359 223 10 349 688 74 421 3.27e-36 143
MsG0180005220.01.T01 AT5G05730 29.032 403 217 13 339 688 173 559 8.33e-36 144
MsG0180005220.01.T01 AT3G55870 29.526 359 223 10 349 688 173 520 1.20e-35 143
MsG0180005220.01.T01 AT2G29690 29.524 315 198 10 351 649 198 504 1.86e-29 123
MsG0180005220.01.T01 AT3G55870 28.707 317 196 10 349 646 173 478 4.18e-25 109

Find 176 sgRNAs with CRISPR-Local

Find 589 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAATCGGTTTCCTTATC+TGG 0.083920 1:-88748121 None:intergenic
CATAGGATCTCTTCATATTT+TGG 0.116489 1:+88745646 MsG0180005220.01.T01:CDS
AAATGATGATGTTTATTTAT+TGG 0.138927 1:+88747860 MsG0180005220.01.T01:CDS
AATAGGACACTTCCATTTAT+TGG 0.140688 1:+88744345 MsG0180005220.01.T01:CDS
ATCTCTTCGTATTCGTCTTC+TGG 0.192553 1:-88749018 None:intergenic
AATGCGGGATATTCCTATTC+TGG 0.233157 1:+88741846 MsG0180005220.01.T01:CDS
TAGAAATGCAAGGGTTCTTA+TGG 0.238540 1:+88744488 MsG0180005220.01.T01:CDS
GCTAGAAGCTAAGCCCATTA+AGG 0.273961 1:+88748286 MsG0180005220.01.T01:CDS
ACGAGCTATAGTACCCTTAA+TGG 0.290221 1:-88748300 None:intergenic
TTTGCTATACCACCATTCTT+TGG 0.294581 1:-88749280 None:intergenic
CATGTGCTTGGCAGTAATTT+TGG 0.296569 1:+88749420 MsG0180005220.01.T01:three_prime_UTR
ATTTATTGGATCCGAGGTTT+TGG 0.298084 1:+88744359 MsG0180005220.01.T01:CDS
CTATTTGAAGTCCATGCTAT+TGG 0.298195 1:-88744327 None:intergenic
GACACTTCTTAACATCTCTA+AGG 0.313097 1:-88748052 None:intergenic
GAACTTCCGTTTCCTGCTTC+AGG 0.314406 1:-88744441 None:intergenic
ATACCTTCTGGTAGAAATTC+TGG 0.316634 1:+88743031 MsG0180005220.01.T01:CDS
TGATTCTCACCTATATCTTC+TGG 0.321594 1:-88740784 None:intergenic
AAGCTCCTGTGACATTATTA+AGG 0.323405 1:-88746818 None:intergenic
AAAACCTCGGATCCAATAAA+TGG 0.325149 1:-88744357 None:intergenic
ATAGCAAAGATAAATTGTTT+TGG 0.326109 1:+88749295 MsG0180005220.01.T01:three_prime_UTR
CTTTGCATTCCTTCTGTAAA+GGG 0.338991 1:-88749254 None:intergenic
GCACTGCATGTCTTGAATTT+CGG 0.354014 1:+88742057 MsG0180005220.01.T01:CDS
TCTCTTCGTATTCGTCTTCT+GGG 0.362497 1:-88749017 None:intergenic
GAGAAGCTTCTGAGCTTAAC+TGG 0.362909 1:+88747933 MsG0180005220.01.T01:CDS
ACAATGGGTTCTCATCTTCC+TGG 0.363667 1:+88749197 MsG0180005220.01.T01:three_prime_UTR
CAATAGCATGGACTTCAAAT+AGG 0.365417 1:+88744328 MsG0180005220.01.T01:CDS
AGTTCAAGCCTTGTTGACTA+TGG 0.367257 1:+88744459 MsG0180005220.01.T01:CDS
ACAAATTACAATGAAATTGT+TGG 0.377422 1:-88749497 None:intergenic
GAAGAGCACGCTTTCGTTCA+TGG 0.378221 1:+88745730 MsG0180005220.01.T01:CDS
TGTCTGACCATGGGCCAAAA+AGG 0.384744 1:-88749118 None:intergenic
TGGTAGAAATTCTGGTTTCA+AGG 0.385639 1:+88743039 MsG0180005220.01.T01:CDS
CGAGGGAGACAGTAACAAAA+AGG 0.386236 1:-88746784 None:intergenic
ATTGAGGTATTAAATTCTCT+TGG 0.386994 1:+88748137 MsG0180005220.01.T01:CDS
CTCAATCGGTTTCCTTATCT+GGG 0.387674 1:-88748120 None:intergenic
GCTATTGGAATGAGCACTTC+AGG 0.390822 1:-88744312 None:intergenic
TTCAAGTATTTCACAATGGT+TGG 0.390964 1:+88747899 MsG0180005220.01.T01:CDS
CCCTGAGAGGTTCCTGCAGT+TGG 0.400432 1:+88748250 MsG0180005220.01.T01:CDS
TAATCTATCACAGTGTTTGC+TGG 0.401931 1:-88749060 None:intergenic
TGTGTCAAAGCTGCATTTCC+TGG 0.402597 1:+88748791 MsG0180005220.01.T01:CDS
AGAGAATTTAATACCTCAAT+CGG 0.403042 1:-88748134 None:intergenic
TTTGGAAGCAGTTAACGTTC+AGG 0.409857 1:+88745771 MsG0180005220.01.T01:CDS
TTTACCTACATTTAAGAGAA+AGG 0.420459 1:+88748162 MsG0180005220.01.T01:CDS
CCCGTGGTTTGATAGGCATT+GGG 0.423040 1:+88742770 MsG0180005220.01.T01:intron
CTAGAAGCTAAGCCCATTAA+GGG 0.423824 1:+88748287 MsG0180005220.01.T01:CDS
AATTGCCCCTCCAGCTCCTA+TGG 0.425604 1:-88748980 None:intergenic
TTTCCTGGTGGTTCGATGAC+AGG 0.425849 1:+88748806 MsG0180005220.01.T01:CDS
AGTTCCATTGATCTCAACTT+TGG 0.425932 1:-88748833 None:intergenic
TCCAACTGCAGGAACCTCTC+AGG 0.428773 1:-88748251 None:intergenic
TGGTTCTGTGAGGATGGATT+TGG 0.430243 1:+88747953 MsG0180005220.01.T01:CDS
TTCACATACAAAATTACAAT+GGG 0.435801 1:+88749182 MsG0180005220.01.T01:three_prime_UTR
GAAAATATAAAATGATTAGT+AGG 0.439931 1:-88749162 None:intergenic
CCTTTGCATTCCTTCTGTAA+AGG 0.440381 1:-88749255 None:intergenic
GACCAAGGTCATTTCTTAGA+AGG 0.440815 1:-88748646 None:intergenic
CCTATTCTGGGTGTTTGCCT+CGG 0.440882 1:+88741859 MsG0180005220.01.T01:CDS
TACCTCAGACGCCCGTGAAC+TGG 0.444477 1:-88742830 None:intergenic
TGAGAAGAATATTGAGATGA+TGG 0.446903 1:-88745697 None:intergenic
CTTTCGTTCATGGGAGGAAA+AGG 0.447355 1:+88745740 MsG0180005220.01.T01:CDS
TTAGAAGGTCAACAATCATC+AGG 0.447823 1:-88748631 None:intergenic
GATTCCTTTCTCTTAAATGT+AGG 0.447911 1:-88748166 None:intergenic
CTTGGTCGTGTATGTGATCC+TGG 0.449044 1:+88748662 MsG0180005220.01.T01:CDS
CGAGCTATAGTACCCTTAAT+GGG 0.451531 1:-88748299 None:intergenic
GATTCTCACCTATATCTTCT+GGG 0.451656 1:-88740783 None:intergenic
CAAATACACAGATCTTCCTT+TGG 0.452881 1:-88748218 None:intergenic
AAAATGATTAGTAGGACAAA+AGG 0.454064 1:-88749154 None:intergenic
ATGCGGGATATTCCTATTCT+GGG 0.455292 1:+88741847 MsG0180005220.01.T01:CDS
GGCATCTACTCAGGCTGCAT+TGG 0.460246 1:+88748884 MsG0180005220.01.T01:CDS
TTCAAATATTGCGTGAATGC+GGG 0.462937 1:+88741831 MsG0180005220.01.T01:CDS
TGACACCACATTCAACTTTG+AGG 0.465437 1:-88747761 None:intergenic
TGTTGACGTGCCGCATCTCA+TGG 0.470293 1:+88748688 MsG0180005220.01.T01:CDS
TTCTGGGCATGCGGAGAACC+AGG 0.471276 1:-88740767 None:intergenic
TGAATCACCACAGGAGGGAC+TGG 0.473424 1:-88740663 None:intergenic
AAAGCGTGCTCTTCCCTATC+GGG 0.474905 1:-88745721 None:intergenic
GAAAGCGTGCTCTTCCCTAT+CGG 0.484181 1:-88745722 None:intergenic
TGCGGCACGTCAACAGATCC+AGG 0.484263 1:-88748680 None:intergenic
TATTTATTTATGCATGTGCT+TGG 0.484763 1:+88749408 MsG0180005220.01.T01:three_prime_UTR
CTTAACTGGTTCTGTGAGGA+TGG 0.485235 1:+88747947 MsG0180005220.01.T01:CDS
AAATTCAGCCAAGCCGCATA+AGG 0.485476 1:-88748194 None:intergenic
AAGAGCACGCTTTCGTTCAT+GGG 0.487866 1:+88745731 MsG0180005220.01.T01:CDS
AGAAATGCAAGGGTTCTTAT+GGG 0.492213 1:+88744489 MsG0180005220.01.T01:CDS
AGCCAAGCCGCATAAGGTGC+TGG 0.493373 1:-88748188 None:intergenic
TCAAATTGAAATTACAGCTC+AGG 0.495889 1:+88748351 MsG0180005220.01.T01:CDS
CCGAGGCAAACACCCAGAAT+AGG 0.495918 1:-88741859 None:intergenic
GTGTGCTTACAAGCTTGATT+TGG 0.495951 1:+88749368 MsG0180005220.01.T01:three_prime_UTR
CGCACCAAAGTTGAGATCAA+TGG 0.499946 1:+88748829 MsG0180005220.01.T01:CDS
GCTTCAGTCATAACATATCC+AGG 0.500944 1:-88749215 None:intergenic
TCAATCATATCGTTATGATA+AGG 0.501529 1:+88746840 MsG0180005220.01.T01:CDS
CATTCTACAAGGCCACACTA+TGG 0.502130 1:+88744519 MsG0180005220.01.T01:CDS
GGGTGTTTGCCTCGGACACC+AGG 0.507562 1:+88741867 MsG0180005220.01.T01:CDS
AGAGGTTCCTGCAGTTGGAT+AGG 0.511649 1:+88748255 MsG0180005220.01.T01:CDS
ATCCAGCACCTTATGCGGCT+TGG 0.512005 1:+88748186 MsG0180005220.01.T01:CDS
TATCCGCCGTGAAAATCAAA+TGG 0.517625 1:-88746880 None:intergenic
CAAATCATGTTGTCTGACCA+TGG 0.522684 1:-88749128 None:intergenic
GCATGCGGAGAACCAGGTCC+AGG 0.524484 1:-88740761 None:intergenic
TGGTGATTCAAAATGATGAT+TGG 0.526558 1:+88740676 MsG0180005220.01.T01:CDS
GGTGAAGCTTCCATAGGAGC+TGG 0.526688 1:+88748970 MsG0180005220.01.T01:exon
GCGGATATGTTGGTTACATC+GGG 0.526889 1:+88746896 MsG0180005220.01.T01:CDS
TCCGCATGCCCAGAAGATAT+AGG 0.541131 1:+88740775 MsG0180005220.01.T01:CDS
ACCTATATCTTCTGGGCATG+CGG 0.543231 1:-88740776 None:intergenic
GAGGAAAAGGTGGATCACTT+TGG 0.543864 1:+88745753 MsG0180005220.01.T01:CDS
CGTGAACTGGTTCAGATGCA+TGG 0.546538 1:-88742817 None:intergenic
CATGCATCTGAACCAGTTCA+CGG 0.547761 1:+88742818 MsG0180005220.01.T01:CDS
CCAGAAACATAGATCAACAT+AGG 0.549090 1:+88745629 MsG0180005220.01.T01:intron
TGTCTAAACTATATTAGAGA+TGG 0.549780 1:+88748071 MsG0180005220.01.T01:CDS
TGTTGCCTTAATAATGTCAC+AGG 0.551543 1:+88746813 MsG0180005220.01.T01:CDS
ATGCATCTGAACCAGTTCAC+GGG 0.555574 1:+88742819 MsG0180005220.01.T01:CDS
TGTGCCTCACAACCCAGATA+AGG 0.555986 1:+88748108 MsG0180005220.01.T01:CDS
CCAACTGCAGGAACCTCTCA+GGG 0.556382 1:-88748250 None:intergenic
CAACAGTTGCCCTTTACAGA+AGG 0.558369 1:+88749245 MsG0180005220.01.T01:three_prime_UTR
ATATTCTTCTCATCCCGATA+GGG 0.558638 1:+88745708 MsG0180005220.01.T01:CDS
GGCGGATATGTTGGTTACAT+CGG 0.559365 1:+88746895 MsG0180005220.01.T01:CDS
AATATTCTTCTCATCCCGAT+AGG 0.561119 1:+88745707 MsG0180005220.01.T01:CDS
CGTTCAGGTTGTCTGATCAG+AGG 0.561324 1:+88745786 MsG0180005220.01.T01:CDS
CTGTGAGGATGGATTTGGAA+AGG 0.565191 1:+88747958 MsG0180005220.01.T01:CDS
TGTTCTCGAGGCATCTACTC+AGG 0.566022 1:+88748875 MsG0180005220.01.T01:CDS
GCAGTGAAGTTGAGCACAAT+GGG 0.566135 1:+88742990 MsG0180005220.01.T01:intron
CCAGATAAGGAAACCGATTG+AGG 0.569130 1:+88748121 MsG0180005220.01.T01:CDS
TTTCACATACAAAATTACAA+TGG 0.569237 1:+88749181 MsG0180005220.01.T01:three_prime_UTR
AAACCAGAATTTCTACCAGA+AGG 0.570639 1:-88743034 None:intergenic
AACCAGTTCACGGGCGTCTG+AGG 0.571689 1:+88742828 MsG0180005220.01.T01:CDS
AAGTGCTCATTCCAATAGCA+TGG 0.571695 1:+88744316 MsG0180005220.01.T01:CDS
TCTCTTGAAAGTTGTTCTCG+AGG 0.572344 1:+88748863 MsG0180005220.01.T01:CDS
AAGGCCACACTATGGTGTGC+AGG 0.572554 1:+88744527 MsG0180005220.01.T01:CDS
AATGCAAAGGATCCAAAGAA+TGG 0.575049 1:+88749268 MsG0180005220.01.T01:three_prime_UTR
TATGATAAGGATGAATATGA+AGG 0.576693 1:+88746853 MsG0180005220.01.T01:CDS
TCGTTCATGGGAGGAAAAGG+TGG 0.576942 1:+88745743 MsG0180005220.01.T01:CDS
AAATCATGTTGTCTGACCAT+GGG 0.579377 1:-88749127 None:intergenic
AGCTTCCATAGGAGCTGGAG+GGG 0.583104 1:+88748975 MsG0180005220.01.T01:exon
GCGCCTGTCATCGAACCACC+AGG 0.583166 1:-88748809 None:intergenic
TTTGCTGTTCTTCCCCTGAG+AGG 0.583316 1:+88748237 MsG0180005220.01.T01:CDS
CTTCAAATATTGCGTGAATG+CGG 0.584840 1:+88741830 MsG0180005220.01.T01:CDS
TATCACTCCTATCCAACTGC+AGG 0.588529 1:-88748262 None:intergenic
GGTGGTTCGATATCATTCGC+TGG 0.593671 1:+88744269 MsG0180005220.01.T01:intron
ACTTCCATTTATTGGATCCG+AGG 0.593929 1:+88744353 MsG0180005220.01.T01:CDS
TAAGACAGTTGTTATACATG+AGG 0.596678 1:+88748948 MsG0180005220.01.T01:CDS
GTTTCCTTATCTGGGTTGTG+AGG 0.596872 1:-88748112 None:intergenic
TTCAAAATGATGATTGGACG+TGG 0.599788 1:+88740682 MsG0180005220.01.T01:CDS
TAGTTTGTCCATAGTCAACA+AGG 0.602079 1:-88744467 None:intergenic
TAGGCATTGGGTTATGTGCA+TGG 0.603761 1:+88742782 MsG0180005220.01.T01:intron
AGCTCGTGGTGCTACTGAGG+AGG 0.604636 1:+88748316 MsG0180005220.01.T01:CDS
AGAGCGAGACTGTGTTAGCA+AGG 0.605656 1:-88742092 None:intergenic
GACCTTCTAAGAAATGACCT+TGG 0.607144 1:+88748644 MsG0180005220.01.T01:CDS
ATGGACAAACTAGAAATGCA+AGG 0.608421 1:+88744478 MsG0180005220.01.T01:CDS
AGCACGCTTTCGTTCATGGG+AGG 0.609772 1:+88745734 MsG0180005220.01.T01:CDS
CATGAGGGTGAAGCTTCCAT+AGG 0.610810 1:+88748964 MsG0180005220.01.T01:CDS
CAATGGTGAGTACAATTCGT+GGG 0.615391 1:+88748738 MsG0180005220.01.T01:CDS
ACAATGGTGAGTACAATTCG+TGG 0.620395 1:+88748737 MsG0180005220.01.T01:CDS
GATAACATCGTATTATCACC+TGG 0.621106 1:+88740743 MsG0180005220.01.T01:CDS
AAAGTTCAAGTATTTCACAA+TGG 0.623372 1:+88747895 MsG0180005220.01.T01:CDS
TATAGCTCGTGGTGCTACTG+AGG 0.623391 1:+88748313 MsG0180005220.01.T01:CDS
GAAGCTTCCATAGGAGCTGG+AGG 0.628682 1:+88748973 MsG0180005220.01.T01:exon
GTCAAAGCTGCATTTCCTGG+TGG 0.629738 1:+88748794 MsG0180005220.01.T01:CDS
AAGACAGTTGTTATACATGA+GGG 0.631663 1:+88748949 MsG0180005220.01.T01:CDS
AAGGAATCCAGCACCTTATG+CGG 0.632251 1:+88748181 MsG0180005220.01.T01:CDS
AGGGAAATACCTGGTGTCCG+AGG 0.634630 1:-88741876 None:intergenic
TGGACAAACTAGAAATGCAA+GGG 0.636769 1:+88744479 MsG0180005220.01.T01:CDS
AAGCTTCCATAGGAGCTGGA+GGG 0.638739 1:+88748974 MsG0180005220.01.T01:exon
TGGGAGTCAAGCATTCTACA+AGG 0.640874 1:+88744508 MsG0180005220.01.T01:CDS
AACACCTGCACACCATAGTG+TGG 0.641639 1:-88744531 None:intergenic
ACAATGGTTGGATGATACTG+AGG 0.643513 1:+88747911 MsG0180005220.01.T01:CDS
TTTCAGTGAAAAGGATCAGG+CGG 0.648387 1:+88748604 MsG0180005220.01.T01:intron
ATCGTATTATCACCTGGACC+TGG 0.649380 1:+88740749 MsG0180005220.01.T01:CDS
GCAAAGGATCCAAAGAATGG+TGG 0.651787 1:+88749271 MsG0180005220.01.T01:three_prime_UTR
TTAAGGCAACATATTTACGA+GGG 0.651895 1:-88746801 None:intergenic
CCTTTACAGAAGGAATGCAA+AGG 0.651964 1:+88749255 MsG0180005220.01.T01:three_prime_UTR
ATTGTACTTGTCCAAAACCT+CGG 0.653172 1:-88744370 None:intergenic
TGCAGTGAAGTTGAGCACAA+TGG 0.654882 1:+88742989 MsG0180005220.01.T01:intron
TGAGCTTAACTGGTTCTGTG+AGG 0.664892 1:+88747943 MsG0180005220.01.T01:CDS
ATATGCAACTGTTCACACAA+TGG 0.665606 1:+88748721 MsG0180005220.01.T01:CDS
ATTAAGGGTACTATAGCTCG+TGG 0.669637 1:+88748302 MsG0180005220.01.T01:CDS
GATTGTACTTCCATGAGATG+CGG 0.673089 1:-88748698 None:intergenic
TGCGAAACCAGCCTTATGTG+AGG 0.675505 1:-88748006 None:intergenic
ATTAAGGCAACATATTTACG+AGG 0.681843 1:-88746802 None:intergenic
CAACTGCAGGAACCTCTCAG+GGG 0.714797 1:-88748249 None:intergenic
CAGGATCACATACACGACCA+AGG 0.715599 1:-88748661 None:intergenic
TATGACCTCAAAGTTGAATG+TGG 0.722703 1:+88747756 MsG0180005220.01.T01:CDS
TCAAAATGATGATTGGACGT+GGG 0.727524 1:+88740683 MsG0180005220.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAATAAATAGAAACA+CGG - Chr1:88744588-88744607 None:intergenic 10.0%
!! AAACAAAAAATTTAAGTCAA+AGG - Chr1:88742467-88742486 None:intergenic 15.0%
!! AAACATAAAACTCATTTATA+TGG + Chr1:88742368-88742387 MsG0180005220.01.T01:intron 15.0%
!! AACAAAAAATTTAAGTCAAA+GGG - Chr1:88742466-88742485 None:intergenic 15.0%
!! AACATAAAACTCATTTATAT+GGG + Chr1:88742369-88742388 MsG0180005220.01.T01:intron 15.0%
!! AACATTAACACAAATTATTT+CGG - Chr1:88745028-88745047 None:intergenic 15.0%
!! ACTTGTAAGAAAATAAAATT+AGG - Chr1:88741546-88741565 None:intergenic 15.0%
!! AGTTAAAACTATAAATGAAA+GGG - Chr1:88742955-88742974 None:intergenic 15.0%
!! GAAAATATAAAATGATTAGT+AGG - Chr1:88749165-88749184 None:intergenic 15.0%
!! TAAAATCATTTGAAGAAAAA+AGG - Chr1:88741793-88741812 None:intergenic 15.0%
!! TAATATTAAAAATTGGATTG+TGG - Chr1:88742606-88742625 None:intergenic 15.0%
!! TAGTTAAAACTATAAATGAA+AGG - Chr1:88742956-88742975 None:intergenic 15.0%
!!! AAATGATGATGTTTATTTAT+TGG + Chr1:88747860-88747879 MsG0180005220.01.T01:CDS 15.0%
!!! AATAAAAAAAGTATCGTAAT+TGG - Chr1:88746728-88746747 None:intergenic 15.0%
!!! AATTTATATGTATTTGGTTT+AGG + Chr1:88744884-88744903 MsG0180005220.01.T01:intron 15.0%
!!! ATAAAAAAAGTATCGTAATT+GGG - Chr1:88746727-88746746 None:intergenic 15.0%
!!! ATTTTGTTTGGATAAATTTT+AGG - Chr1:88743992-88744011 None:intergenic 15.0%
!!! GTTTTATTACAAATTTCAAT+TGG + Chr1:88745207-88745226 MsG0180005220.01.T01:intron 15.0%
!!! TATTTGATAATTCAGTAATT+TGG + Chr1:88748502-88748521 MsG0180005220.01.T01:intron 15.0%
!!! TTTTAATACAATTTATGAGA+TGG + Chr1:88742148-88742167 MsG0180005220.01.T01:intron 15.0%
!!! TTTTGTTTGGATAAATTTTA+GGG - Chr1:88743991-88744010 None:intergenic 15.0%
!! AAAACATTCAAAGTAATACA+TGG - Chr1:88746536-88746555 None:intergenic 20.0%
!! AAACATTCAAAGTAATACAT+GGG - Chr1:88746535-88746554 None:intergenic 20.0%
!! AAATCCGAAAAAATTACATA+TGG + Chr1:88744071-88744090 MsG0180005220.01.T01:intron 20.0%
!! ACAAATTACAATGAAATTGT+TGG - Chr1:88749500-88749519 None:intergenic 20.0%
!! ACACAATTTGCAAAATTAAA+AGG - Chr1:88742010-88742029 None:intergenic 20.0%
!! ACTGAATTATCAAATATACT+TGG - Chr1:88748498-88748517 None:intergenic 20.0%
!! ATATTATTTGATAAGCACAT+AGG - Chr1:88745004-88745023 None:intergenic 20.0%
!! ATCTAATTTCTATTGTTACT+TGG + Chr1:88746377-88746396 MsG0180005220.01.T01:intron 20.0%
!! ATTCAATGTAAGCATTTATT+TGG - Chr1:88746938-88746957 None:intergenic 20.0%
!! CAAACAATTATTATGATTAG+TGG - Chr1:88744237-88744256 None:intergenic 20.0%
!! CAAATTCTTCAAAATATATG+AGG - Chr1:88741698-88741717 None:intergenic 20.0%
!! CGTATTATGTTGTATTTAAA+AGG - Chr1:88742186-88742205 None:intergenic 20.0%
!! GAAATACATACTATAGTAAA+GGG - Chr1:88744031-88744050 None:intergenic 20.0%
!! GAACGAAAAAATAATGTATT+AGG - Chr1:88743669-88743688 None:intergenic 20.0%
!! GTTAAAACTATAAATGAAAG+GGG - Chr1:88742954-88742973 None:intergenic 20.0%
!! TAAAATTTGAATTGATCAAG+AGG - Chr1:88743941-88743960 None:intergenic 20.0%
!! TGAAATACATACTATAGTAA+AGG - Chr1:88744032-88744051 None:intergenic 20.0%
!! TTAAATTGTATTGGGAAAAA+GGG - Chr1:88741922-88741941 None:intergenic 20.0%
!! TTAACATCATAAATTCACAA+TGG - Chr1:88740997-88741016 None:intergenic 20.0%
!! TTAACTCATATGATCAAATT+TGG + Chr1:88741137-88741156 MsG0180005220.01.T01:intron 20.0%
!! TTCACATACAAAATTACAAT+GGG + Chr1:88749182-88749201 MsG0180005220.01.T01:three_prime_UTR 20.0%
!! TTTAAATGGGATAAAAAACA+TGG - Chr1:88740919-88740938 None:intergenic 20.0%
!! TTTCACATACAAAATTACAA+TGG + Chr1:88749181-88749200 MsG0180005220.01.T01:three_prime_UTR 20.0%
!!! AAACCATTTTCTCATTTATA+AGG - Chr1:88745072-88745091 None:intergenic 20.0%
!!! AATTTTTTGTTTCTTTGAGA+AGG + Chr1:88742475-88742494 MsG0180005220.01.T01:intron 20.0%
!!! ACAATTTTGAATAAAGAAGA+GGG - Chr1:88741898-88741917 None:intergenic 20.0%
!!! ACCATTAATTTTTTCCTTTT+TGG + Chr1:88749104-88749123 MsG0180005220.01.T01:three_prime_UTR 20.0%
!!! AGATACACATATTTTACATT+TGG + Chr1:88745597-88745616 MsG0180005220.01.T01:intron 20.0%
!!! ATAGCAAAGATAAATTGTTT+TGG + Chr1:88749295-88749314 MsG0180005220.01.T01:three_prime_UTR 20.0%
!!! CTGTTAAAAAAATAGTTTTG+AGG - Chr1:88741315-88741334 None:intergenic 20.0%
!!! CTTAATAGTTCATTTTTCTT+TGG + Chr1:88742113-88742132 MsG0180005220.01.T01:CDS 20.0%
!!! GTCGAACATTTTTAAAAATT+TGG + Chr1:88743104-88743123 MsG0180005220.01.T01:intron 20.0%
!!! TACAATTTTGAATAAAGAAG+AGG - Chr1:88741899-88741918 None:intergenic 20.0%
!!! TACAGAAAAGATATTTTGTT+TGG - Chr1:88744004-88744023 None:intergenic 20.0%
!!! TAGCAAAGATAAATTGTTTT+GGG + Chr1:88749296-88749315 MsG0180005220.01.T01:three_prime_UTR 20.0%
!!! TCTACTTTTTTAGAAGATTA+CGG + Chr1:88741981-88742000 MsG0180005220.01.T01:intron 20.0%
! AAAATGATTAGTAGGACAAA+AGG - Chr1:88749157-88749176 None:intergenic 25.0%
! AAAGTTCAAGTATTTCACAA+TGG + Chr1:88747895-88747914 MsG0180005220.01.T01:CDS 25.0%
! AACTTGATTATGAAGAATGA+GGG - Chr1:88746223-88746242 None:intergenic 25.0%
! AATACAATTTAACCACTTTC+TGG + Chr1:88741930-88741949 MsG0180005220.01.T01:intron 25.0%
! ACAATTATTATGATTAGTGG+TGG - Chr1:88744234-88744253 None:intergenic 25.0%
! ACACAATAAATCAACACTTT+AGG + Chr1:88741287-88741306 MsG0180005220.01.T01:intron 25.0%
! ACTAAGTTGTATGAAAATCT+TGG + Chr1:88743262-88743281 MsG0180005220.01.T01:intron 25.0%
! AGAAAGTGGTTAAATTGTAT+TGG - Chr1:88741931-88741950 None:intergenic 25.0%
! AGAGAATTTAATACCTCAAT+CGG - Chr1:88748137-88748156 None:intergenic 25.0%
! AGTTATACTTACAATTCATG+TGG - Chr1:88741649-88741668 None:intergenic 25.0%
! ATAACTTTACGCATATCTTA+TGG - Chr1:88742398-88742417 None:intergenic 25.0%
! ATAAGGAAAGTCAAAATTTC+TGG + Chr1:88746633-88746652 MsG0180005220.01.T01:intron 25.0%
! ATGCACAAAAAAATACATAC+AGG - Chr1:88746674-88746693 None:intergenic 25.0%
! CAATCTTAAAACAACAACAA+AGG + Chr1:88741241-88741260 MsG0180005220.01.T01:intron 25.0%
! CACAAAACTTAAACATAGTT+AGG - Chr1:88742719-88742738 None:intergenic 25.0%
! CATAGAAAAACCTGTTAAAA+TGG - Chr1:88748415-88748434 None:intergenic 25.0%
! GAAAGTGGTTAAATTGTATT+GGG - Chr1:88741930-88741949 None:intergenic 25.0%
! GCCAAAAAGGAAAAAATTAA+TGG - Chr1:88749108-88749127 None:intergenic 25.0%
! GTAAATTGTCTCTTGTAAAT+AGG - Chr1:88744846-88744865 None:intergenic 25.0%
! GTTAAATTGTATTGGGAAAA+AGG - Chr1:88741923-88741942 None:intergenic 25.0%
! TAAACACTGTTCACAAAAAT+GGG - Chr1:88742311-88742330 None:intergenic 25.0%
! TAAGGAAAGTCAAAATTTCT+GGG + Chr1:88746634-88746653 MsG0180005220.01.T01:intron 25.0%
! TACATTCCAAATTACTTTGA+GGG - Chr1:88747522-88747541 None:intergenic 25.0%
! TATGACTTCAGTTTACATAT+TGG + Chr1:88748431-88748450 MsG0180005220.01.T01:intron 25.0%
! TATGATAAGGATGAATATGA+AGG + Chr1:88746853-88746872 MsG0180005220.01.T01:CDS 25.0%
! TATTTATTTATGCATGTGCT+TGG + Chr1:88749408-88749427 MsG0180005220.01.T01:three_prime_UTR 25.0%
! TCAATCATATCGTTATGATA+AGG + Chr1:88746840-88746859 MsG0180005220.01.T01:CDS 25.0%
! TCTAGTGATAAAAGTTAATC+AGG - Chr1:88741419-88741438 None:intergenic 25.0%
! TGAACCCAATAAAACATATT+TGG + Chr1:88742338-88742357 MsG0180005220.01.T01:intron 25.0%
! TGACCTTATAAATGAGAAAA+TGG + Chr1:88745066-88745085 MsG0180005220.01.T01:intron 25.0%
! TGTCTAAACTATATTAGAGA+TGG + Chr1:88748071-88748090 MsG0180005220.01.T01:CDS 25.0%
! TTAAAAATTGGATTGTGGAT+AGG - Chr1:88742601-88742620 None:intergenic 25.0%
! TTACATTCCAAATTACTTTG+AGG - Chr1:88747523-88747542 None:intergenic 25.0%
! TTATCAACAAGAACAACAAA+AGG + Chr1:88746981-88747000 MsG0180005220.01.T01:intron 25.0%
! TTATTCTTGTGACTCTTTAA+TGG + Chr1:88743509-88743528 MsG0180005220.01.T01:intron 25.0%
! TTCTGTCAAAACAATATTCT+TGG + Chr1:88746036-88746055 MsG0180005220.01.T01:intron 25.0%
! TTGATCATATGAGTTAACAA+AGG - Chr1:88741134-88741153 None:intergenic 25.0%
! TTTACCTACATTTAAGAGAA+AGG + Chr1:88748162-88748181 MsG0180005220.01.T01:CDS 25.0%
!! AAAGTAAGTTGGAATGTAAA+GGG + Chr1:88747149-88747168 MsG0180005220.01.T01:intron 25.0%
!! ACCTTCCAAATATGTTTTAT+TGG - Chr1:88742346-88742365 None:intergenic 25.0%
!! AGTGTTTCTTATATTTTCCA+AGG + Chr1:88743752-88743771 MsG0180005220.01.T01:intron 25.0%
!! ATCCAGATATATGAGATTTT+AGG + Chr1:88741177-88741196 MsG0180005220.01.T01:intron 25.0%
!! ATGAATTTTTGTGACATACT+TGG + Chr1:88746696-88746715 MsG0180005220.01.T01:intron 25.0%
!! ATTCATATTTGAGACATACA+AGG + Chr1:88743167-88743186 MsG0180005220.01.T01:intron 25.0%
!! ATTCTGAATTTTCTTTGACT+TGG + Chr1:88743288-88743307 MsG0180005220.01.T01:intron 25.0%
!! ATTGAGGTATTAAATTCTCT+TGG + Chr1:88748137-88748156 MsG0180005220.01.T01:CDS 25.0%
!! CAAAGTAATTTGGAATGTAA+AGG + Chr1:88747523-88747542 MsG0180005220.01.T01:intron 25.0%
!! GGAAAATATTTTCTTAACAG+AGG + Chr1:88743310-88743329 MsG0180005220.01.T01:intron 25.0%
!! GGTCTTGTATATAACAAATA+TGG - Chr1:88747694-88747713 None:intergenic 25.0%
!! GTGTTTCTTATATTTTCCAA+GGG + Chr1:88743753-88743772 MsG0180005220.01.T01:intron 25.0%
!! GTTTTCTTGATTATTGAACA+AGG + Chr1:88746065-88746084 MsG0180005220.01.T01:intron 25.0%
!! TACATGTTTTACATGAATGA+TGG - Chr1:88744114-88744133 None:intergenic 25.0%
!! TCCAGATATATGAGATTTTA+GGG + Chr1:88741178-88741197 MsG0180005220.01.T01:intron 25.0%
!! TGAAATCCATCATAATTTTG+TGG + Chr1:88747622-88747641 MsG0180005220.01.T01:intron 25.0%
!!! AATTTTAGGGTTTCTAGAAA+TGG - Chr1:88743978-88743997 None:intergenic 25.0%
!!! ACAAAACTTTGAAGTTGAAA+TGG + Chr1:88745353-88745372 MsG0180005220.01.T01:intron 25.0%
!!! AGCAAAGATAAATTGTTTTG+GGG + Chr1:88749297-88749316 MsG0180005220.01.T01:three_prime_UTR 25.0%
!!! ATTGTTGTTTAATGAAAGTG+TGG + Chr1:88741748-88741767 MsG0180005220.01.T01:intron 25.0%
!!! ATTTTTTCTATTGCTTTCTC+AGG - Chr1:88740849-88740868 None:intergenic 25.0%
!!! CCTTCCAAATATGTTTTATT+GGG - Chr1:88742345-88742364 None:intergenic 25.0%
!!! GTGTACATTTAATTTTTCCT+TGG + Chr1:88742736-88742755 MsG0180005220.01.T01:intron 25.0%
!!! TCAATTTGTTGACATAAACA+TGG - Chr1:88744618-88744637 None:intergenic 25.0%
!!! TTCTGAATTTTCTTTGACTT+GGG + Chr1:88743289-88743308 MsG0180005220.01.T01:intron 25.0%
AAAAAGAAAGTTTACTGCTC+AGG - Chr1:88745267-88745286 None:intergenic 30.0%
AAAACAATATTCTTGGATGG+AGG + Chr1:88746043-88746062 MsG0180005220.01.T01:intron 30.0%
AAACCTGTTAAAATGGTGAT+AGG - Chr1:88748408-88748427 None:intergenic 30.0%
AAAGGTAACAAGTATACTCT+CGG - Chr1:88741116-88741135 None:intergenic 30.0%
AACCTGTTAAAATGGTGATA+GGG - Chr1:88748407-88748426 None:intergenic 30.0%
AAGACAGTTGTTATACATGA+GGG + Chr1:88748949-88748968 MsG0180005220.01.T01:CDS 30.0%
AATAGGACACTTCCATTTAT+TGG + Chr1:88744345-88744364 MsG0180005220.01.T01:CDS 30.0%
AATTGTTTGCCACAAATTTC+AGG + Chr1:88744248-88744267 MsG0180005220.01.T01:intron 30.0%
ACCTTGAACATGATGATTAA+AGG + Chr1:88747379-88747398 MsG0180005220.01.T01:intron 30.0%
AGGGGATATATTTAGATTTC+AGG + Chr1:88741197-88741216 MsG0180005220.01.T01:intron 30.0%
AGTATATTCTGTCAGTTGTT+TGG + Chr1:88745418-88745437 MsG0180005220.01.T01:intron 30.0%
AGTTTACACTAGATAGTGTT+TGG + Chr1:88746244-88746263 MsG0180005220.01.T01:intron 30.0%
ATAGGTTCATAATCATGATG+AGG - Chr1:88742583-88742602 None:intergenic 30.0%
ATTAAGGCAACATATTTACG+AGG - Chr1:88746805-88746824 None:intergenic 30.0%
ATTGTGCTCAATTTCTTATG+TGG - Chr1:88743416-88743435 None:intergenic 30.0%
CAACTTGATTATGAAGAATG+AGG - Chr1:88746224-88746243 None:intergenic 30.0%
CATAATACGTTTGTTTGCTT+CGG + Chr1:88742197-88742216 MsG0180005220.01.T01:intron 30.0%
CATACTCTTCAAATTCTCAT+CGG + Chr1:88741578-88741597 MsG0180005220.01.T01:intron 30.0%
CCCAATAAAACATATTTGGA+AGG + Chr1:88742342-88742361 MsG0180005220.01.T01:intron 30.0%
CTTACCATTGTGAAATACTT+TGG + Chr1:88741017-88741036 MsG0180005220.01.T01:intron 30.0%
CTTGTGAACATGATGATTAA+AGG + Chr1:88747190-88747209 MsG0180005220.01.T01:intron 30.0%
CTTGTGAACATGATTGATAA+AGG + Chr1:88747564-88747583 MsG0180005220.01.T01:intron 30.0%
CTTTAATCATCATGTTCACA+AGG - Chr1:88747192-88747211 None:intergenic 30.0%
CTTTATCAATCATGTTCACA+AGG - Chr1:88747566-88747585 None:intergenic 30.0%
GAAAAAATACTAATCACAGC+AGG - Chr1:88742663-88742682 None:intergenic 30.0%
GAAATCCAGATCATAATTTG+TGG + Chr1:88747249-88747268 MsG0180005220.01.T01:intron 30.0%
GAAGGTAGTAAACAATATAG+TGG + Chr1:88742493-88742512 MsG0180005220.01.T01:intron 30.0%
GAGAGATTACAGATGATTAT+TGG + Chr1:88744699-88744718 MsG0180005220.01.T01:intron 30.0%
GATTCCTTTCTCTTAAATGT+AGG - Chr1:88748169-88748188 None:intergenic 30.0%
GCAGTTAAGAAACAAAGAAA+GGG + Chr1:88746573-88746592 MsG0180005220.01.T01:intron 30.0%
GTAAACACTGTTCACAAAAA+TGG - Chr1:88742312-88742331 None:intergenic 30.0%
GTCAAAACAATATTCTTGGA+TGG + Chr1:88746040-88746059 MsG0180005220.01.T01:intron 30.0%
GTCAACTTTCTCTTGTAAAT+AGG + Chr1:88744946-88744965 MsG0180005220.01.T01:intron 30.0%
TAAGACAGTTGTTATACATG+AGG + Chr1:88748948-88748967 MsG0180005220.01.T01:CDS 30.0%
TACATTCCAACTTACTTTGA+GGG - Chr1:88747147-88747166 None:intergenic 30.0%
TAGCTTCCACAAAATTATGA+TGG - Chr1:88747631-88747650 None:intergenic 30.0%
TAGGAACAACTGTATTTAGA+GGG - Chr1:88741527-88741546 None:intergenic 30.0%
TATGACATCTGACAATAGTT+AGG - Chr1:88742685-88742704 None:intergenic 30.0%
TATTAGACTCTATAGGTGTT+TGG + Chr1:88746188-88746207 MsG0180005220.01.T01:intron 30.0%
TCAAATTGAAATTACAGCTC+AGG + Chr1:88748351-88748370 MsG0180005220.01.T01:CDS 30.0%
TCAGATTATGCAAAACTTTC+TGG - Chr1:88747043-88747062 None:intergenic 30.0%
TCATGACAAAAAACATAGCA+AGG - Chr1:88748466-88748485 None:intergenic 30.0%
TCCTTTAATCATCATGTTCA+AGG - Chr1:88747194-88747213 None:intergenic 30.0%
TGAGAAGAATATTGAGATGA+TGG - Chr1:88745700-88745719 None:intergenic 30.0%
TGCAGTTAAGAAACAAAGAA+AGG + Chr1:88746572-88746591 MsG0180005220.01.T01:intron 30.0%
TGGTGATTCAAAATGATGAT+TGG + Chr1:88740676-88740695 MsG0180005220.01.T01:CDS 30.0%
TTAAGAAACAAAGAAAGGGT+GGG + Chr1:88746577-88746596 MsG0180005220.01.T01:intron 30.0%
TTAAGGCAACATATTTACGA+GGG - Chr1:88746804-88746823 None:intergenic 30.0%
TTACATTCCAACTTACTTGA+GGG - Chr1:88747339-88747358 None:intergenic 30.0%
TTACATTCCAACTTACTTTG+AGG - Chr1:88747148-88747167 None:intergenic 30.0%
TTAGGAACAACTGTATTTAG+AGG - Chr1:88741528-88741547 None:intergenic 30.0%
TTATGTGAGGAAAAAGTTGA+AGG - Chr1:88747996-88748015 None:intergenic 30.0%
TTCAAGTATTTCACAATGGT+TGG + Chr1:88747899-88747918 MsG0180005220.01.T01:CDS 30.0%
TTGACCTTATAAACTAGAGT+GGG + Chr1:88745154-88745173 MsG0180005220.01.T01:intron 30.0%
TTTACATTCCAACTTACTTG+AGG - Chr1:88747340-88747359 None:intergenic 30.0%
! AAACCAAACCAGCTTTTAAA+AGG - Chr1:88740635-88740654 None:intergenic 30.0%
! AAGTTTTGCATAATCTGACA+AGG + Chr1:88747045-88747064 MsG0180005220.01.T01:intron 30.0%
! AGATGTTTGTTGAAATTCTG+AGG + Chr1:88743868-88743887 MsG0180005220.01.T01:intron 30.0%
! AGTTTTGCATAATCTGACAA+GGG + Chr1:88747046-88747065 MsG0180005220.01.T01:intron 30.0%
! ATCCATTCGTTTTATAGTGA+TGG + Chr1:88745968-88745987 MsG0180005220.01.T01:intron 30.0%
! ATGATGATTAAAGGAGCATA+TGG + Chr1:88747199-88747218 MsG0180005220.01.T01:intron 30.0%
! ATGATTGATAAAGGAGCATA+TGG + Chr1:88747573-88747592 MsG0180005220.01.T01:intron 30.0%
! ATTTTACTGATCGAAATCAG+AGG - Chr1:88746512-88746531 None:intergenic 30.0%
! CAAAGTAAGTTGGAATGTAA+AGG + Chr1:88747148-88747167 MsG0180005220.01.T01:intron 30.0%
! CAAGTAAGTTGGAATGTAAA+GGG + Chr1:88747340-88747359 MsG0180005220.01.T01:intron 30.0%
! CATAGGATCTCTTCATATTT+TGG + Chr1:88745646-88745665 MsG0180005220.01.T01:CDS 30.0%
! CCAGATATATGAGATTTTAG+GGG + Chr1:88741179-88741198 MsG0180005220.01.T01:intron 30.0%
! GAAAATTTGATTCGTGTGTT+CGG + Chr1:88743890-88743909 MsG0180005220.01.T01:intron 30.0%
! GTAAGAGTGTAATAGAAACA+AGG - Chr1:88745577-88745596 None:intergenic 30.0%
! TAACAGATTCATTTAGAGTC+AGG + Chr1:88741329-88741348 MsG0180005220.01.T01:intron 30.0%
! TAATTGATTTCCTATGTTGC+AGG + Chr1:88747733-88747752 MsG0180005220.01.T01:intron 30.0%
! TAATTTGGAATGTAAAGGAC+AGG + Chr1:88747528-88747547 MsG0180005220.01.T01:intron 30.0%
! TATTTGTTAGTTCACTTGAG+AGG - Chr1:88747715-88747734 None:intergenic 30.0%
! TCAAGTAAGTTGGAATGTAA+AGG + Chr1:88747339-88747358 MsG0180005220.01.T01:intron 30.0%
! TCCATTCGTTTTATAGTGAT+GGG + Chr1:88745969-88745988 MsG0180005220.01.T01:intron 30.0%
! TGAAAAATCTTTTACTCCCT+CGG + Chr1:88744819-88744838 MsG0180005220.01.T01:intron 30.0%
!! AAACTTTGAAGTTGAAATGG+AGG + Chr1:88745356-88745375 MsG0180005220.01.T01:intron 30.0%
!! AACCAAACCAGCTTTTAAAA+GGG - Chr1:88740634-88740653 None:intergenic 30.0%
!! AATTGGCCTTCAACTTAATA+TGG + Chr1:88745224-88745243 MsG0180005220.01.T01:intron 30.0%
!! GAACTACCATATTAAGTTGA+AGG - Chr1:88745233-88745252 None:intergenic 30.0%
!! TTCAACTTTTTCCTCACATA+AGG + Chr1:88747995-88748014 MsG0180005220.01.T01:CDS 30.0%
!!! ATCTTGTCCTGTCTTTTTTA+GGG + Chr1:88745112-88745131 MsG0180005220.01.T01:intron 30.0%
!!! CGTTTTCTTTTTCAGTGAAA+AGG + Chr1:88748595-88748614 MsG0180005220.01.T01:intron 30.0%
!!! GGCACCATATGTAATTTTTT+CGG - Chr1:88744078-88744097 None:intergenic 30.0%
!!! TATCTTGTCCTGTCTTTTTT+AGG + Chr1:88745111-88745130 MsG0180005220.01.T01:intron 30.0%
!!! TGCAACTGAAATACTTTTTC+AGG - Chr1:88745888-88745907 None:intergenic 30.0%
!!! TTCTTTTTCAACTATTAGCG+AGG + Chr1:88743686-88743705 MsG0180005220.01.T01:intron 30.0%
AAAACCTCGGATCCAATAAA+TGG - Chr1:88744360-88744379 None:intergenic 35.0%
AAACCAGAATTTCTACCAGA+AGG - Chr1:88743037-88743056 None:intergenic 35.0%
AAATCATGTTGTCTGACCAT+GGG - Chr1:88749130-88749149 None:intergenic 35.0%
AACTAGACCCTAAAAAAGAC+AGG - Chr1:88745122-88745141 None:intergenic 35.0%
AACTGTATTTAGAGGGAAGT+TGG - Chr1:88741520-88741539 None:intergenic 35.0%
AAGCTATCTTCATTAGTTGC+AGG - Chr1:88743383-88743402 None:intergenic 35.0%
AAGCTCCTGTGACATTATTA+AGG - Chr1:88746821-88746840 None:intergenic 35.0%
AAGGTAACAAGTATACTCTC+GGG - Chr1:88741115-88741134 None:intergenic 35.0%
AATATTCTTCTCATCCCGAT+AGG + Chr1:88745707-88745726 MsG0180005220.01.T01:CDS 35.0%
AATGCAAAGGATCCAAAGAA+TGG + Chr1:88749268-88749287 MsG0180005220.01.T01:three_prime_UTR 35.0%
ACATTCCAACTTACTTTGAG+GGG - Chr1:88747146-88747165 None:intergenic 35.0%
ACGATAGATGATAGGTAAAC+AGG + Chr1:88746602-88746621 MsG0180005220.01.T01:intron 35.0%
ACTATTATCATACCAAAGCG+TGG - Chr1:88745925-88745944 None:intergenic 35.0%
ACTGTAATCCTTCTGCATAT+TGG - Chr1:88743546-88743565 None:intergenic 35.0%
ACTTACAATTCATGTGGTTG+AGG - Chr1:88741643-88741662 None:intergenic 35.0%
AGAAATGCAAGGGTTCTTAT+GGG + Chr1:88744489-88744508 MsG0180005220.01.T01:CDS 35.0%
AGACTCGTTGAAATCCTATT+TGG + Chr1:88748534-88748553 MsG0180005220.01.T01:intron 35.0%
AGCAATTCTGTTGGAGAAAA+AGG - Chr1:88746412-88746431 None:intergenic 35.0%
AGCTACCATATTTCCTGTTT+AGG - Chr1:88746443-88746462 None:intergenic 35.0%
AGCTTCCACAAATTATGATC+TGG - Chr1:88747257-88747276 None:intergenic 35.0%
AGTGAATTGTAATACTCCCT+CGG - Chr1:88744973-88744992 None:intergenic 35.0%
AGTGTAATAGAAACAAGGTC+CGG - Chr1:88745572-88745591 None:intergenic 35.0%
AGTTCCATTGATCTCAACTT+TGG - Chr1:88748836-88748855 None:intergenic 35.0%
ATAAAGAAGAGGGAAATACC+TGG - Chr1:88741888-88741907 None:intergenic 35.0%
ATACAAGGAATTCAGATGCT+AGG + Chr1:88743182-88743201 MsG0180005220.01.T01:intron 35.0%
ATACCTTCTGGTAGAAATTC+TGG + Chr1:88743031-88743050 MsG0180005220.01.T01:CDS 35.0%
ATATGCAACTGTTCACACAA+TGG + Chr1:88748721-88748740 MsG0180005220.01.T01:CDS 35.0%
ATATTCTTCTCATCCCGATA+GGG + Chr1:88745708-88745727 MsG0180005220.01.T01:CDS 35.0%
ATGACTCGTAGGTCTTTAAA+TGG - Chr1:88740933-88740952 None:intergenic 35.0%
ATGGACAAACTAGAAATGCA+AGG + Chr1:88744478-88744497 MsG0180005220.01.T01:CDS 35.0%
ATGGAGGAAATTTGATCACT+TGG + Chr1:88745372-88745391 MsG0180005220.01.T01:intron 35.0%
ATTAGTTGCAGGAAGAATCT+GGG - Chr1:88743372-88743391 None:intergenic 35.0%
ATTGTACTTGTCCAAAACCT+CGG - Chr1:88744373-88744392 None:intergenic 35.0%
CAAATACACAGATCTTCCTT+TGG - Chr1:88748221-88748240 None:intergenic 35.0%
CAAATCATACAATGACTCGT+AGG - Chr1:88740944-88740963 None:intergenic 35.0%
CAATAGCATGGACTTCAAAT+AGG + Chr1:88744328-88744347 MsG0180005220.01.T01:CDS 35.0%
CAGAATCTTCCAGTGATAAA+TGG - Chr1:88746012-88746031 None:intergenic 35.0%
CAGTGCACTCAATTGAAATT+TGG - Chr1:88742043-88742062 None:intergenic 35.0%
CCAGAAACATAGATCAACAT+AGG + Chr1:88745629-88745648 MsG0180005220.01.T01:intron 35.0%
CCCCTAAAATCTCATATATC+TGG - Chr1:88741182-88741201 None:intergenic 35.0%
CCTATGTTGATCTATGTTTC+TGG - Chr1:88745632-88745651 None:intergenic 35.0%
CTTCAAATATTGCGTGAATG+CGG + Chr1:88741830-88741849 MsG0180005220.01.T01:CDS 35.0%
CTTCAGGCAAAAATGAATCA+AGG - Chr1:88744428-88744447 None:intergenic 35.0%
CTTGACCTTATAAACTAGAG+TGG + Chr1:88745153-88745172 MsG0180005220.01.T01:intron 35.0%
CTTTGCATTCCTTCTGTAAA+GGG - Chr1:88749257-88749276 None:intergenic 35.0%
GAAGATATAGGTGAGAATCA+TGG + Chr1:88740787-88740806 MsG0180005220.01.T01:intron 35.0%
GACACTTCTTAACATCTCTA+AGG - Chr1:88748055-88748074 None:intergenic 35.0%
GAGAAATCCTCCTAAAACAA+AGG - Chr1:88743618-88743637 None:intergenic 35.0%
GAGTATACCAATACTTTCAG+TGG - Chr1:88743845-88743864 None:intergenic 35.0%
GATAACATCGTATTATCACC+TGG + Chr1:88740743-88740762 MsG0180005220.01.T01:CDS 35.0%
GATTCTCACCTATATCTTCT+GGG - Chr1:88740786-88740805 None:intergenic 35.0%
GCAAAGAAAAAACATGCATC+TGG - Chr1:88747813-88747832 None:intergenic 35.0%
GCAATTCTGTTGGAGAAAAA+GGG - Chr1:88746411-88746430 None:intergenic 35.0%
GCTACCATATTTCCTGTTTA+GGG - Chr1:88746442-88746461 None:intergenic 35.0%
GGTACAAAAAGCAATTCTGT+TGG - Chr1:88746421-88746440 None:intergenic 35.0%
GGTATATACTGAAGCTATGT+TGG + Chr1:88746086-88746105 MsG0180005220.01.T01:intron 35.0%
GTAAACAGGACAAAGACATA+AGG + Chr1:88746616-88746635 MsG0180005220.01.T01:intron 35.0%
GTTAAGAAACAAAGAAAGGG+TGG + Chr1:88746576-88746595 MsG0180005220.01.T01:intron 35.0%
TAAGACGATGGAGAAAATGT+TGG + Chr1:88742549-88742568 MsG0180005220.01.T01:intron 35.0%
TAATCTATCACAGTGTTTGC+TGG - Chr1:88749063-88749082 None:intergenic 35.0%
TACAACTTAGTCCACAATTG+CGG - Chr1:88743253-88743272 None:intergenic 35.0%
TAGAAATGCAAGGGTTCTTA+TGG + Chr1:88744488-88744507 MsG0180005220.01.T01:CDS 35.0%
TATAATGCTCTTGCATGAAG+TGG + Chr1:88746348-88746367 MsG0180005220.01.T01:intron 35.0%
TATATTCATTCTCCTGAGTG+TGG - Chr1:88742888-88742907 None:intergenic 35.0%
TATGAAGAATGAGGGTAACA+AGG - Chr1:88746215-88746234 None:intergenic 35.0%
TATGACCTCAAAGTTGAATG+TGG + Chr1:88747756-88747775 MsG0180005220.01.T01:CDS 35.0%
TCAAAATGATGATTGGACGT+GGG + Chr1:88740683-88740702 MsG0180005220.01.T01:CDS 35.0%
TCAATGCTTTGATAAGACGA+TGG + Chr1:88742537-88742556 MsG0180005220.01.T01:intron 35.0%
TCATATAGATACCATCTCTG+TGG - Chr1:88745479-88745498 None:intergenic 35.0%
TCCCATCACTATAAAACGAA+TGG - Chr1:88745973-88745992 None:intergenic 35.0%
TCGCATGAACAAAACATCTT+AGG + Chr1:88741459-88741478 MsG0180005220.01.T01:intron 35.0%
TCTAACAATATGCATGTCCT+GGG - Chr1:88746154-88746173 None:intergenic 35.0%
TGACTCGTAGGTCTTTAAAT+GGG - Chr1:88740932-88740951 None:intergenic 35.0%
TGATTCTCACCTATATCTTC+TGG - Chr1:88740787-88740806 None:intergenic 35.0%
TGCAACTAATGAAGATAGCT+TGG + Chr1:88743382-88743401 MsG0180005220.01.T01:intron 35.0%
TGCTTCCACAAATTATGATC+TGG - Chr1:88747442-88747461 None:intergenic 35.0%
TGGACAAACTAGAAATGCAA+GGG + Chr1:88744479-88744498 MsG0180005220.01.T01:CDS 35.0%
TGTACCCTAAACAGGAAATA+TGG + Chr1:88746435-88746454 MsG0180005220.01.T01:intron 35.0%
TGTCCTTTCAAAACATATGC+AGG - Chr1:88741675-88741694 None:intergenic 35.0%
TGTTGCCTTAATAATGTCAC+AGG + Chr1:88746813-88746832 MsG0180005220.01.T01:CDS 35.0%
TTACAAACAAGTGGCACATT+TGG + Chr1:88743463-88743482 MsG0180005220.01.T01:intron 35.0%
TTAGAAGGTCAACAATCATC+AGG - Chr1:88748634-88748653 None:intergenic 35.0%
TTAGGAGAGAAGAATAATGC+AGG - Chr1:88743651-88743670 None:intergenic 35.0%
TTATCACTGGAAGATTCTGA+AGG + Chr1:88746013-88746032 MsG0180005220.01.T01:intron 35.0%
TTATGAGATGGAAACAGTGT+TGG + Chr1:88742160-88742179 MsG0180005220.01.T01:intron 35.0%
TTCAAAATGATGATTGGACG+TGG + Chr1:88740682-88740701 MsG0180005220.01.T01:CDS 35.0%
TTCAAATATTGCGTGAATGC+GGG + Chr1:88741831-88741850 MsG0180005220.01.T01:CDS 35.0%
TTCAACTATTAGCGAGGATA+AGG + Chr1:88743692-88743711 MsG0180005220.01.T01:intron 35.0%
TTCTTGTGACTCTTTAATGG+TGG + Chr1:88743512-88743531 MsG0180005220.01.T01:intron 35.0%
TTTCTTCACCAATATGCAGA+AGG + Chr1:88743535-88743554 MsG0180005220.01.T01:intron 35.0%
! AAATTTGGTCTTCACATCTG+TGG + Chr1:88741152-88741171 MsG0180005220.01.T01:intron 35.0%
! AGATCCCACTCTAGTTTATA+AGG - Chr1:88745161-88745180 None:intergenic 35.0%
! ATGATTATTGGCTGAGATGT+AGG + Chr1:88744711-88744730 MsG0180005220.01.T01:intron 35.0%
! ATTCCAAATTACTTTGAGGG+AGG - Chr1:88747519-88747538 None:intergenic 35.0%
! ATTTATTGGATCCGAGGTTT+TGG + Chr1:88744359-88744378 MsG0180005220.01.T01:CDS 35.0%
! CTATTTGAAGTCCATGCTAT+TGG - Chr1:88744330-88744349 None:intergenic 35.0%
! GAAGACGTTTTTGTTCTAGT+TGG + Chr1:88743714-88743733 MsG0180005220.01.T01:intron 35.0%
! GAGAATTTGAAGAGTATGAG+CGG - Chr1:88741576-88741595 None:intergenic 35.0%
! GTGTTCGTTTTACAAACAAG+TGG + Chr1:88743454-88743473 MsG0180005220.01.T01:intron 35.0%
! TAGAAAGTGCAACACATTGA+AGG - Chr1:88741965-88741984 None:intergenic 35.0%
! TAGGTGAGAATCATGGATTT+TGG + Chr1:88740794-88740813 MsG0180005220.01.T01:intron 35.0%
! TAGTTTGTCCATAGTCAACA+AGG - Chr1:88744470-88744489 None:intergenic 35.0%
! TATAGTGATGGGAGTTCAAA+AGG + Chr1:88745980-88745999 MsG0180005220.01.T01:intron 35.0%
! TCATCATTTTGAATCACCAC+AGG - Chr1:88740675-88740694 None:intergenic 35.0%
! TCTTGAATATTTGACTTCCG+TGG - Chr1:88744674-88744693 None:intergenic 35.0%
! TGATTATTGGCTGAGATGTA+GGG + Chr1:88744712-88744731 MsG0180005220.01.T01:intron 35.0%
! TTCCAAATTACTTTGAGGGA+GGG - Chr1:88747518-88747537 None:intergenic 35.0%
! TTTGCTATACCACCATTCTT+TGG - Chr1:88749283-88749302 None:intergenic 35.0%
!! ACACCTGCATATGTTTTGAA+AGG + Chr1:88741669-88741688 MsG0180005220.01.T01:intron 35.0%
!! ACGTTTTTGTTCTAGTTGGT+GGG + Chr1:88743718-88743737 MsG0180005220.01.T01:intron 35.0%
!! ACTCTCGGGATACTTTTTAT+TGG - Chr1:88741101-88741120 None:intergenic 35.0%
!! AGAAATTCTGGTTTCAAGGT+GGG + Chr1:88743043-88743062 MsG0180005220.01.T01:intron 35.0%
!! GGTCTACCATTTGATTTTCA+CGG + Chr1:88746874-88746893 MsG0180005220.01.T01:CDS 35.0%
!! TAAGATGTTTTGTTCATGCG+AGG - Chr1:88741460-88741479 None:intergenic 35.0%
!! TAGAAATTCTGGTTTCAAGG+TGG + Chr1:88743042-88743061 MsG0180005220.01.T01:intron 35.0%
!! TCAAAGCATTGACATACATC+AGG - Chr1:88742529-88742548 None:intergenic 35.0%
!! TGGTAGAAATTCTGGTTTCA+AGG + Chr1:88743039-88743058 MsG0180005220.01.T01:CDS 35.0%
!! TTCCCTATCACCATTTTAAC+AGG + Chr1:88748402-88748421 MsG0180005220.01.T01:intron 35.0%
!!! AAGTCAAAGGGCATTTTTCT+TGG - Chr1:88742454-88742473 None:intergenic 35.0%
!!! AGATAAATTGTTTTGGGGTG+AGG + Chr1:88749302-88749321 MsG0180005220.01.T01:three_prime_UTR 35.0%
!!! ATTTTTTCCTTTTTGGCCCA+TGG + Chr1:88749111-88749130 MsG0180005220.01.T01:three_prime_UTR 35.0%
!!! CTGGAGTTTTAGATTTGTGA+TGG - Chr1:88747794-88747813 None:intergenic 35.0%
!!! CTTTTTCAGTGAAAAGGATC+AGG + Chr1:88748601-88748620 MsG0180005220.01.T01:intron 35.0%
!!! TGGGAAAATCGGATTTTTTG+AGG - Chr1:88743353-88743372 None:intergenic 35.0%
!!! TTGCTTTTTGTACCCTAAAC+AGG + Chr1:88746427-88746446 MsG0180005220.01.T01:intron 35.0%
AAAGCGTGGAAAGATTAGAC+TGG - Chr1:88745911-88745930 None:intergenic 40.0%
AAATTCACAATGGCCACATG+TGG - Chr1:88740987-88741006 None:intergenic 40.0%
AACAAAGGCTTTGCACTAGA+CGG + Chr1:88741256-88741275 MsG0180005220.01.T01:intron 40.0%
AAGGTATGCCCTGAAAAAGT+TGG - Chr1:88743018-88743037 None:intergenic 40.0%
AAGTGCTCATTCCAATAGCA+TGG + Chr1:88744316-88744335 MsG0180005220.01.T01:CDS 40.0%
AAGTTGGAATGTAAAGGGAC+AGG + Chr1:88747154-88747173 MsG0180005220.01.T01:intron 40.0%
AATGCGGGATATTCCTATTC+TGG + Chr1:88741846-88741865 MsG0180005220.01.T01:CDS 40.0%
ACAATGGTGAGTACAATTCG+TGG + Chr1:88748737-88748756 MsG0180005220.01.T01:CDS 40.0%
ACAATGGTTGGATGATACTG+AGG + Chr1:88747911-88747930 MsG0180005220.01.T01:CDS 40.0%
ACGAGCTATAGTACCCTTAA+TGG - Chr1:88748303-88748322 None:intergenic 40.0%
ACTTCCATTTATTGGATCCG+AGG + Chr1:88744353-88744372 MsG0180005220.01.T01:CDS 40.0%
AGGAAATTTGATCACTTGGC+TGG + Chr1:88745376-88745395 MsG0180005220.01.T01:intron 40.0%
AGTCTAATCTTTCCACGCTT+TGG + Chr1:88745910-88745929 MsG0180005220.01.T01:intron 40.0%
ATCGAACCACCTGAAATTTG+TGG - Chr1:88744260-88744279 None:intergenic 40.0%
ATCTCTTCGTATTCGTCTTC+TGG - Chr1:88749021-88749040 None:intergenic 40.0%
ATGCGGGATATTCCTATTCT+GGG + Chr1:88741847-88741866 MsG0180005220.01.T01:CDS 40.0%
ATGGCTCAGAAACAGGTTAA+AGG + Chr1:88741066-88741085 MsG0180005220.01.T01:intron 40.0%
ATTCCAACTTACTTGAGGGA+GGG - Chr1:88747335-88747354 None:intergenic 40.0%
ATTCTGTTGGAGAAAAAGGG+CGG - Chr1:88746408-88746427 None:intergenic 40.0%
ATTGTGTAATTGCCACACTC+AGG + Chr1:88742873-88742892 MsG0180005220.01.T01:intron 40.0%
CAAATCATGTTGTCTGACCA+TGG - Chr1:88749131-88749150 None:intergenic 40.0%
CAATGGTGAGTACAATTCGT+GGG + Chr1:88748738-88748757 MsG0180005220.01.T01:CDS 40.0%
CAGGAAGAATCTGGGAAAAT+CGG - Chr1:88743364-88743383 None:intergenic 40.0%
CATTAGTTGCAGGAAGAATC+TGG - Chr1:88743373-88743392 None:intergenic 40.0%
CATTGTTGATCTACCACATG+TGG + Chr1:88740971-88740990 MsG0180005220.01.T01:intron 40.0%
CCTTTACAGAAGGAATGCAA+AGG + Chr1:88749255-88749274 MsG0180005220.01.T01:three_prime_UTR 40.0%
CCTTTGCATTCCTTCTGTAA+AGG - Chr1:88749258-88749277 None:intergenic 40.0%
CGAGCTATAGTACCCTTAAT+GGG - Chr1:88748302-88748321 None:intergenic 40.0%
CTAACAATATGCATGTCCTG+GGG - Chr1:88746153-88746172 None:intergenic 40.0%
CTAGAAGCTAAGCCCATTAA+GGG + Chr1:88748287-88748306 MsG0180005220.01.T01:CDS 40.0%
CTCATCGGTATCACAATCAA+GGG + Chr1:88741593-88741612 MsG0180005220.01.T01:intron 40.0%
CTCCTAAAACAAAGGAGACA+GGG - Chr1:88743610-88743629 None:intergenic 40.0%
CTCGAATCATGTACTAGCAT+AGG - Chr1:88746326-88746345 None:intergenic 40.0%
CTCTAACAATATGCATGTCC+TGG - Chr1:88746155-88746174 None:intergenic 40.0%
GACCAAGGTCATTTCTTAGA+AGG - Chr1:88748649-88748668 None:intergenic 40.0%
GATCGAAATCAGAGGAGAAT+GGG - Chr1:88746504-88746523 None:intergenic 40.0%
GATTGTACTTCCATGAGATG+CGG - Chr1:88748701-88748720 None:intergenic 40.0%
GCACTGCATGTCTTGAATTT+CGG + Chr1:88742057-88742076 MsG0180005220.01.T01:CDS 40.0%
GCTTCAGTCATAACATATCC+AGG - Chr1:88749218-88749237 None:intergenic 40.0%
GGAAAACGTGCTAATTCTGA+TGG + Chr1:88744749-88744768 MsG0180005220.01.T01:intron 40.0%
GGAAATTTGATCACTTGGCT+GGG + Chr1:88745377-88745396 MsG0180005220.01.T01:intron 40.0%
GGACTATAGATCCACTCAAA+CGG - Chr1:88740898-88740917 None:intergenic 40.0%
GTACAATTCGTGGGAAAAAG+AGG + Chr1:88748747-88748766 MsG0180005220.01.T01:CDS 40.0%
GTGGAAGACTATCAACCAAA+AGG - Chr1:88745460-88745479 None:intergenic 40.0%
GTGTAATAGAAACAAGGTCC+GGG - Chr1:88745571-88745590 None:intergenic 40.0%
GTGTGCTTACAAGCTTGATT+TGG + Chr1:88749368-88749387 MsG0180005220.01.T01:three_prime_UTR 40.0%
TAACAATATGCATGTCCTGG+GGG - Chr1:88746152-88746171 None:intergenic 40.0%
TATCCGCCGTGAAAATCAAA+TGG - Chr1:88746883-88746902 None:intergenic 40.0%
TCATCGGTATCACAATCAAG+GGG + Chr1:88741594-88741613 MsG0180005220.01.T01:intron 40.0%
TCTCATCGGTATCACAATCA+AGG + Chr1:88741592-88741611 MsG0180005220.01.T01:intron 40.0%
TCTCTTCGTATTCGTCTTCT+GGG - Chr1:88749020-88749039 None:intergenic 40.0%
TCTCTTGAAAGTTGTTCTCG+AGG + Chr1:88748863-88748882 MsG0180005220.01.T01:CDS 40.0%
TCTCTTGTAAATAGGACCGA+GGG + Chr1:88744954-88744973 MsG0180005220.01.T01:intron 40.0%
TCTCTTGTAAATAGGACCGA+GGG - Chr1:88744973-88744954 None:intergenic 40.0%
TCTGTAAATGTCCGTTTGAG+TGG + Chr1:88740884-88740903 MsG0180005220.01.T01:intron 40.0%
TGACACCACATTCAACTTTG+AGG - Chr1:88747764-88747783 None:intergenic 40.0%
TGATCGAAATCAGAGGAGAA+TGG - Chr1:88746505-88746524 None:intergenic 40.0%
TGGCTCAGAAACAGGTTAAA+GGG + Chr1:88741067-88741086 MsG0180005220.01.T01:intron 40.0%
TGTTTGCCACAAATTTCAGG+TGG + Chr1:88744251-88744270 MsG0180005220.01.T01:intron 40.0%
TTACATGAATGATGGCACTG+CGG - Chr1:88744106-88744125 None:intergenic 40.0%
TTCTCTTGTAAATAGGACCG+AGG + Chr1:88744953-88744972 MsG0180005220.01.T01:intron 40.0%
TTTCAGTGAAAAGGATCAGG+CGG + Chr1:88748604-88748623 MsG0180005220.01.T01:intron 40.0%
TTTCCAAGGGAAAGAGATGT+CGG + Chr1:88743766-88743785 MsG0180005220.01.T01:intron 40.0%
TTTGGAAGCAGTTAACGTTC+AGG + Chr1:88745771-88745790 MsG0180005220.01.T01:CDS 40.0%
! ATATGTTGGTTACATCGGGT+AGG + Chr1:88746900-88746919 MsG0180005220.01.T01:intron 40.0%
! ATGTAGGGCATCATACAACA+AGG + Chr1:88744727-88744746 MsG0180005220.01.T01:intron 40.0%
! CAGAAGCTGAAAACACCTTT+TGG + Chr1:88745442-88745461 MsG0180005220.01.T01:intron 40.0%
! CATGTGCTTGGCAGTAATTT+TGG + Chr1:88749420-88749439 MsG0180005220.01.T01:three_prime_UTR 40.0%
! CATTCCAACTTACTTTGAGG+GGG - Chr1:88747145-88747164 None:intergenic 40.0%
! CATTTTGAATCACCACAGGA+GGG - Chr1:88740671-88740690 None:intergenic 40.0%
! CTCAATCGGTTTCCTTATCT+GGG - Chr1:88748123-88748142 None:intergenic 40.0%
! GACCTTCTAAGAAATGACCT+TGG + Chr1:88748644-88748663 MsG0180005220.01.T01:CDS 40.0%
! GACGTGCTATTAGACTCTAT+AGG + Chr1:88746181-88746200 MsG0180005220.01.T01:intron 40.0%
! GGCACCAAAGTATTTCACAA+TGG - Chr1:88741024-88741043 None:intergenic 40.0%
! TCATTTTGAATCACCACAGG+AGG - Chr1:88740672-88740691 None:intergenic 40.0%
! TGAAGTGCCACTGAAAGTAT+TGG + Chr1:88743835-88743854 MsG0180005220.01.T01:intron 40.0%
! TGTAGGGCATCATACAACAA+GGG + Chr1:88744728-88744747 MsG0180005220.01.T01:intron 40.0%
! TTGATAGTCTTCCACAGAGA+TGG + Chr1:88745465-88745484 MsG0180005220.01.T01:intron 40.0%
! TTTCTAGTGTGTGCATGAGT+GGG - Chr1:88744795-88744814 None:intergenic 40.0%
! TTTTTGCCTGAAGCAGGAAA+CGG + Chr1:88744435-88744454 MsG0180005220.01.T01:CDS 40.0%
!! AAACTTTCTTTTTAGCGCGC+AGG + Chr1:88745274-88745293 MsG0180005220.01.T01:intron 40.0%
!! AACTTTCTGGCTGATGCTTT+AGG - Chr1:88747030-88747049 None:intergenic 40.0%
!! ACTTTTTCCTCACATAAGGC+TGG + Chr1:88747999-88748018 MsG0180005220.01.T01:CDS 40.0%
!! AGTTCAAGCCTTGTTGACTA+TGG + Chr1:88744459-88744478 MsG0180005220.01.T01:CDS 40.0%
!! ATTAAGGGTACTATAGCTCG+TGG + Chr1:88748302-88748321 MsG0180005220.01.T01:CDS 40.0%
!! CGGGATACTTTTTATTGGCA+TGG - Chr1:88741096-88741115 None:intergenic 40.0%
!! CTACCATTTGATTTTCACGG+CGG + Chr1:88746877-88746896 MsG0180005220.01.T01:CDS 40.0%
!! GACGTTTTTGTTCTAGTTGG+TGG + Chr1:88743717-88743736 MsG0180005220.01.T01:intron 40.0%
!! GATTCATTTTTGCCTGAAGC+AGG + Chr1:88744429-88744448 MsG0180005220.01.T01:CDS 40.0%
!! GGGACAATGAATTTGCTGAT+TGG - Chr1:88747125-88747144 None:intergenic 40.0%
!! GTCCCTTTTAAAAGCTGGTT+TGG + Chr1:88740629-88740648 MsG0180005220.01.T01:CDS 40.0%
!! TGCATCAAGCTTTGAAGACA+TGG - Chr1:88747080-88747099 None:intergenic 40.0%
!! TTTTCTAGTGTGTGCATGAG+TGG - Chr1:88744796-88744815 None:intergenic 40.0%
!!! AATGGGTGCCAACTTTTTCA+GGG + Chr1:88743007-88743026 MsG0180005220.01.T01:CDS 40.0%
!!! GAGGTTTTGGACAAGTACAA+TGG + Chr1:88744372-88744391 MsG0180005220.01.T01:CDS 40.0%
!!! TTCCCTGTCTCCTTTGTTTT+AGG + Chr1:88743605-88743624 MsG0180005220.01.T01:intron 40.0%
AAATTCAGCCAAGCCGCATA+AGG - Chr1:88748197-88748216 None:intergenic 45.0%
AAGGAATCCAGCACCTTATG+CGG + Chr1:88748181-88748200 MsG0180005220.01.T01:CDS 45.0%
ACAAAGGCTTTGCACTAGAC+GGG + Chr1:88741257-88741276 MsG0180005220.01.T01:intron 45.0%
ACCCAATGCCTATCAAACCA+CGG - Chr1:88742774-88742793 None:intergenic 45.0%
ACCTATATCTTCTGGGCATG+CGG - Chr1:88740779-88740798 None:intergenic 45.0%
ATAGAAACAAGGTCCGGGAA+TGG - Chr1:88745566-88745585 None:intergenic 45.0%
ATCGTATTATCACCTGGACC+TGG + Chr1:88740749-88740768 MsG0180005220.01.T01:CDS 45.0%
ATCTCTTCCCGTGGTTTGAT+AGG + Chr1:88742763-88742782 MsG0180005220.01.T01:intron 45.0%
ATGCATCTGAACCAGTTCAC+GGG + Chr1:88742819-88742838 MsG0180005220.01.T01:CDS 45.0%
CAACAGTTGCCCTTTACAGA+AGG + Chr1:88749245-88749264 MsG0180005220.01.T01:three_prime_UTR 45.0%
CATCGGTATCACAATCAAGG+GGG + Chr1:88741595-88741614 MsG0180005220.01.T01:intron 45.0%
CATGCATCTGAACCAGTTCA+CGG + Chr1:88742818-88742837 MsG0180005220.01.T01:CDS 45.0%
CATGTTCAAGGTCTCTTCCA+TGG - Chr1:88747371-88747390 None:intergenic 45.0%
CATTCCAACTTACTTGAGGG+AGG - Chr1:88747336-88747355 None:intergenic 45.0%
CATTCTACAAGGCCACACTA+TGG + Chr1:88744519-88744538 MsG0180005220.01.T01:CDS 45.0%
CCAGATAAGGAAACCGATTG+AGG + Chr1:88748121-88748140 MsG0180005220.01.T01:CDS 45.0%
CCTCCTAAAACAAAGGAGAC+AGG - Chr1:88743611-88743630 None:intergenic 45.0%
CGAGGGAGACAGTAACAAAA+AGG - Chr1:88746787-88746806 None:intergenic 45.0%
CGCACCAAAGTTGAGATCAA+TGG + Chr1:88748829-88748848 MsG0180005220.01.T01:CDS 45.0%
CGCTGCTATCAAGTGTATCA+GGG - Chr1:88741045-88741064 None:intergenic 45.0%
CTTTCGTTCATGGGAGGAAA+AGG + Chr1:88745740-88745759 MsG0180005220.01.T01:CDS 45.0%
GAGAAGCTTCTGAGCTTAAC+TGG + Chr1:88747933-88747952 MsG0180005220.01.T01:CDS 45.0%
GAGGAAAAGGTGGATCACTT+TGG + Chr1:88745753-88745772 MsG0180005220.01.T01:CDS 45.0%
GCAAAGGATCCAAAGAATGG+TGG + Chr1:88749271-88749290 MsG0180005220.01.T01:three_prime_UTR 45.0%
GCAGTGAAGTTGAGCACAAT+GGG + Chr1:88742990-88743009 MsG0180005220.01.T01:intron 45.0%
GCTAGAAGCTAAGCCCATTA+AGG + Chr1:88748286-88748305 MsG0180005220.01.T01:CDS 45.0%
GCTATTGGAATGAGCACTTC+AGG - Chr1:88744315-88744334 None:intergenic 45.0%
GGTGGGAAACGATAGATGAT+AGG + Chr1:88746594-88746613 MsG0180005220.01.T01:intron 45.0%
GTCTCTTGTAAATAGGACCG+AGG - Chr1:88744839-88744858 None:intergenic 45.0%
GTTTCCTTATCTGGGTTGTG+AGG - Chr1:88748115-88748134 None:intergenic 45.0%
TATCACTCCTATCCAACTGC+AGG - Chr1:88748265-88748284 None:intergenic 45.0%
TGAGGTCATACCTGCAACAT+AGG - Chr1:88747746-88747765 None:intergenic 45.0%
TGCAGTGAAGTTGAGCACAA+TGG + Chr1:88742989-88743008 MsG0180005220.01.T01:intron 45.0%
TGCCCTCCCTCAAAGTAATT+TGG + Chr1:88747513-88747532 MsG0180005220.01.T01:intron 45.0%
TGGGAGTCAAGCATTCTACA+AGG + Chr1:88744508-88744527 MsG0180005220.01.T01:CDS 45.0%
TGTGTCAAAGCTGCATTTCC+TGG + Chr1:88748791-88748810 MsG0180005220.01.T01:CDS 45.0%
TGTTCACAAGGTCTCTTCCA+TGG - Chr1:88747180-88747199 None:intergenic 45.0%
TTCCAAGGGAAAGAGATGTC+GGG + Chr1:88743767-88743786 MsG0180005220.01.T01:intron 45.0%
TTCTAGTGTGTGCATGAGTG+GGG - Chr1:88744794-88744813 None:intergenic 45.0%
TTGAGGGAGGGCAATGAATT+TGG - Chr1:88747323-88747342 None:intergenic 45.0%
TTGATGTTGCTCCGCAATTG+TGG + Chr1:88743239-88743258 MsG0180005220.01.T01:intron 45.0%
TTGTCCCCCTCAAAGTAAGT+TGG + Chr1:88747138-88747157 MsG0180005220.01.T01:intron 45.0%
! AAGAGCACGCTTTCGTTCAT+GGG + Chr1:88745731-88745750 MsG0180005220.01.T01:CDS 45.0%
! ACAATGGGTTCTCATCTTCC+TGG + Chr1:88749197-88749216 MsG0180005220.01.T01:three_prime_UTR 45.0%
! AGGTTTGCTCAACCAGAAAG+TGG - Chr1:88741945-88741964 None:intergenic 45.0%
! AGTGATGGGAGTTCAAAAGG+TGG + Chr1:88745983-88746002 MsG0180005220.01.T01:intron 45.0%
! ATACACTTGATAGCAGCGCA+TGG + Chr1:88741047-88741066 MsG0180005220.01.T01:intron 45.0%
! CAGCTGCTTTGCATCCAAAT+AGG - Chr1:88748551-88748570 None:intergenic 45.0%
! CCTCAATCGGTTTCCTTATC+TGG - Chr1:88748124-88748143 None:intergenic 45.0%
! CTGTGAGGATGGATTTGGAA+AGG + Chr1:88747958-88747977 MsG0180005220.01.T01:CDS 45.0%
! GAATATTTGACTTCCGTGGC+AGG - Chr1:88744670-88744689 None:intergenic 45.0%
! GATTTTCACGGCGGATATGT+TGG + Chr1:88746886-88746905 MsG0180005220.01.T01:CDS 45.0%
! GCGAGGAAGAAGATTAGTCA+AGG - Chr1:88741443-88741462 None:intergenic 45.0%
! GCGGATATGTTGGTTACATC+GGG + Chr1:88746896-88746915 MsG0180005220.01.T01:CDS 45.0%
! GGCGGATATGTTGGTTACAT+CGG + Chr1:88746895-88746914 MsG0180005220.01.T01:CDS 45.0%
! GGCTTGGCTGAATTTTCCAA+AGG + Chr1:88748202-88748221 MsG0180005220.01.T01:CDS 45.0%
! TGGTTCTGTGAGGATGGATT+TGG + Chr1:88747953-88747972 MsG0180005220.01.T01:CDS 45.0%
!! CAATGGGTGCCAACTTTTTC+AGG + Chr1:88743006-88743025 MsG0180005220.01.T01:CDS 45.0%
!! CTTAACTGGTTCTGTGAGGA+TGG + Chr1:88747947-88747966 MsG0180005220.01.T01:CDS 45.0%
!! GTGAGGTTCGCTTTTCTAAC+AGG + Chr1:88749319-88749338 MsG0180005220.01.T01:three_prime_UTR 45.0%
!! TAGGCATTGGGTTATGTGCA+TGG + Chr1:88742782-88742801 MsG0180005220.01.T01:intron 45.0%
!! TGAGCTTAACTGGTTCTGTG+AGG + Chr1:88747943-88747962 MsG0180005220.01.T01:CDS 45.0%
!!! CCTGTCTCCTTTGTTTTAGG+AGG + Chr1:88743608-88743627 MsG0180005220.01.T01:intron 45.0%
!!! CTTTTTCAGGGCATACCTTC+TGG + Chr1:88743019-88743038 MsG0180005220.01.T01:CDS 45.0%
!!! GGCAGTAATTTTGGCTTGCT+GGG + Chr1:88749429-88749448 MsG0180005220.01.T01:three_prime_UTR 45.0%
!!! TGGCAGTAATTTTGGCTTGC+TGG + Chr1:88749428-88749447 MsG0180005220.01.T01:three_prime_UTR 45.0%
!! AAAAACATAATATTAAAAAT+TGG - Chr1:88742613-88742632 None:intergenic 5.0%
!! TTAAATAATTTATATGTATT+TGG + Chr1:88744878-88744897 MsG0180005220.01.T01:intron 5.0%
AAAGCGTGCTCTTCCCTATC+GGG - Chr1:88745724-88745743 None:intergenic 50.0%
AACACCTGCACACCATAGTG+TGG - Chr1:88744534-88744553 None:intergenic 50.0%
AACAGTCCCAGTGCATTGCA+CGG + Chr1:88747294-88747313 MsG0180005220.01.T01:intron 50.0%
AAGCTTCCATAGGAGCTGGA+GGG + Chr1:88748974-88748993 MsG0180005220.01.T01:exon 50.0%
AATGATGGCACTGCGGAATC+TGG - Chr1:88744099-88744118 None:intergenic 50.0%
AGAGCGAGACTGTGTTAGCA+AGG - Chr1:88742095-88742114 None:intergenic 50.0%
AGAGGTTCCTGCAGTTGGAT+AGG + Chr1:88748255-88748274 MsG0180005220.01.T01:CDS 50.0%
ATAGCTGCACCAAACTCTGC+TGG + Chr1:88747099-88747118 MsG0180005220.01.T01:intron 50.0%
CAAAGGCTTTGCACTAGACG+GGG + Chr1:88741258-88741277 MsG0180005220.01.T01:intron 50.0%
CACGGGAAGAGATTAAGCCA+AGG - Chr1:88742756-88742775 None:intergenic 50.0%
CAGGATCACATACACGACCA+AGG - Chr1:88748664-88748683 None:intergenic 50.0%
CATGAGGGTGAAGCTTCCAT+AGG + Chr1:88748964-88748983 MsG0180005220.01.T01:CDS 50.0%
CCCAATGCCTATCAAACCAC+GGG - Chr1:88742773-88742792 None:intergenic 50.0%
CCCGTGGTTTGATAGGCATT+GGG + Chr1:88742770-88742789 MsG0180005220.01.T01:intron 50.0%
CCTATTCTGGGTGTTTGCCT+CGG + Chr1:88741859-88741878 MsG0180005220.01.T01:CDS 50.0%
CTTGGCTTAATCTCTTCCCG+TGG + Chr1:88742754-88742773 MsG0180005220.01.T01:intron 50.0%
CTTGGTCGTGTATGTGATCC+TGG + Chr1:88748662-88748681 MsG0180005220.01.T01:CDS 50.0%
GAACTTCCGTTTCCTGCTTC+AGG - Chr1:88744444-88744463 None:intergenic 50.0%
GAATGTAAAGGGACAGGCCA+TGG + Chr1:88747160-88747179 MsG0180005220.01.T01:intron 50.0%
GAGTGGGGAACACAGTTCTT+CGG - Chr1:88744779-88744798 None:intergenic 50.0%
GATGGGAGTTCAAAAGGTGG+TGG + Chr1:88745986-88746005 MsG0180005220.01.T01:intron 50.0%
GCGCTGCTATCAAGTGTATC+AGG - Chr1:88741046-88741065 None:intergenic 50.0%
GGAAGGGATGCATCACATAG+TGG + Chr1:88743804-88743823 MsG0180005220.01.T01:intron 50.0%
GGAATGTAAAGGACAGGCCA+TGG + Chr1:88747534-88747553 MsG0180005220.01.T01:intron 50.0%
GGTGGTTCGATATCATTCGC+TGG + Chr1:88744269-88744288 MsG0180005220.01.T01:intron 50.0%
GTCAAAGCTGCATTTCCTGG+TGG + Chr1:88748794-88748813 MsG0180005220.01.T01:CDS 50.0%
TCCCGTGGTTTGATAGGCAT+TGG + Chr1:88742769-88742788 MsG0180005220.01.T01:intron 50.0%
TCCGCATGCCCAGAAGATAT+AGG + Chr1:88740775-88740794 MsG0180005220.01.T01:CDS 50.0%
TCGTTCATGGGAGGAAAAGG+TGG + Chr1:88745743-88745762 MsG0180005220.01.T01:CDS 50.0%
TGGAACCTGTGCAATGCACT+GGG - Chr1:88747303-88747322 None:intergenic 50.0%
TGTCTGACCATGGGCCAAAA+AGG - Chr1:88749121-88749140 None:intergenic 50.0%
TGTGCCTCACAACCCAGATA+AGG + Chr1:88748108-88748127 MsG0180005220.01.T01:CDS 50.0%
TTGCCCTCCCTCAAGTAAGT+TGG + Chr1:88747329-88747348 MsG0180005220.01.T01:intron 50.0%
TTGGAACCTGTGCAATGCAC+TGG - Chr1:88747304-88747323 None:intergenic 50.0%
TTTCCTGGTGGTTCGATGAC+AGG + Chr1:88748806-88748825 MsG0180005220.01.T01:CDS 50.0%
! AGGTGGTGGCCATTTATCAC+TGG + Chr1:88746000-88746019 MsG0180005220.01.T01:intron 50.0%
! CGTGAACTGGTTCAGATGCA+TGG - Chr1:88742820-88742839 None:intergenic 50.0%
! GAAAGCGTGCTCTTCCCTAT+CGG - Chr1:88745725-88745744 None:intergenic 50.0%
! GAAGAGCACGCTTTCGTTCA+TGG + Chr1:88745730-88745749 MsG0180005220.01.T01:CDS 50.0%
! TGCGAAACCAGCCTTATGTG+AGG - Chr1:88748009-88748028 None:intergenic 50.0%
! TGTTCTCGAGGCATCTACTC+AGG + Chr1:88748875-88748894 MsG0180005220.01.T01:CDS 50.0%
! TGTTGGTTACATCGGGTAGG+TGG + Chr1:88746903-88746922 MsG0180005220.01.T01:intron 50.0%
!! CGTTCAGGTTGTCTGATCAG+AGG + Chr1:88745786-88745805 MsG0180005220.01.T01:CDS 50.0%
!! GAATGGCTTGGTGGTGACAA+CGG - Chr1:88745549-88745568 None:intergenic 50.0%
!! GGTGGCTTGATAGTGAGGAA+GGG + Chr1:88743788-88743807 MsG0180005220.01.T01:intron 50.0%
!! TATAGCTCGTGGTGCTACTG+AGG + Chr1:88748313-88748332 MsG0180005220.01.T01:CDS 50.0%
!! TTTGCTGTTCTTCCCCTGAG+AGG + Chr1:88748237-88748256 MsG0180005220.01.T01:CDS 50.0%
!!! GGCTTGCTGGGTTTTGTTTC+TGG + Chr1:88749441-88749460 MsG0180005220.01.T01:three_prime_UTR 50.0%
AACAAGGTCCGGGAATGGCT+TGG - Chr1:88745561-88745580 None:intergenic 55.0%
AAGGCCACACTATGGTGTGC+AGG + Chr1:88744527-88744546 MsG0180005220.01.T01:CDS 55.0%
AATTGCCCCTCCAGCTCCTA+TGG - Chr1:88748983-88749002 None:intergenic 55.0%
ACACTTCTTACCTAGCCCCC+AGG + Chr1:88746134-88746153 MsG0180005220.01.T01:intron 55.0%
ACAGTCCCAGTGCATTGCAC+AGG + Chr1:88747295-88747314 MsG0180005220.01.T01:intron 55.0%
ACAGTCCCAGTGCATTGCAC+GGG + Chr1:88747295-88747314 MsG0180005220.01.T01:intron 55.0%
AGCACGCTTTCGTTCATGGG+AGG + Chr1:88745734-88745753 MsG0180005220.01.T01:CDS 55.0%
AGCTTCCATAGGAGCTGGAG+GGG + Chr1:88748975-88748994 MsG0180005220.01.T01:exon 55.0%
AGGGAAATACCTGGTGTCCG+AGG - Chr1:88741879-88741898 None:intergenic 55.0%
ATATGCATGTCCTGGGGGCT+AGG - Chr1:88746147-88746166 None:intergenic 55.0%
ATCCAGCACCTTATGCGGCT+TGG + Chr1:88748186-88748205 MsG0180005220.01.T01:CDS 55.0%
ATGGAACCCGTGCAATGCAC+TGG - Chr1:88747675-88747694 None:intergenic 55.0%
CAACTGCAGGAACCTCTCAG+GGG - Chr1:88748252-88748271 None:intergenic 55.0%
CAAGGGAAAGAGATGTCGGG+TGG + Chr1:88743770-88743789 MsG0180005220.01.T01:intron 55.0%
CACCCGACATCTCTTTCCCT+TGG - Chr1:88743772-88743791 None:intergenic 55.0%
CCAACTGCAGGAACCTCTCA+GGG - Chr1:88748253-88748272 None:intergenic 55.0%
CCGAGGCAAACACCCAGAAT+AGG - Chr1:88741862-88741881 None:intergenic 55.0%
GAAGCTTCCATAGGAGCTGG+AGG + Chr1:88748973-88748992 MsG0180005220.01.T01:exon 55.0%
GATCACTTGGCTGGGCAAGT+TGG + Chr1:88745385-88745404 MsG0180005220.01.T01:intron 55.0%
GGCATCTACTCAGGCTGCAT+TGG + Chr1:88748884-88748903 MsG0180005220.01.T01:CDS 55.0%
GGTGAAGCTTCCATAGGAGC+TGG + Chr1:88748970-88748989 MsG0180005220.01.T01:exon 55.0%
TCCAACTGCAGGAACCTCTC+AGG - Chr1:88748254-88748273 None:intergenic 55.0%
TGAATCACCACAGGAGGGAC+TGG - Chr1:88740666-88740685 None:intergenic 55.0%
TGGAACCCGTGCAATGCACT+GGG - Chr1:88747674-88747693 None:intergenic 55.0%
TGGCAGGTTGCAACACTCTC+TGG - Chr1:88744654-88744673 None:intergenic 55.0%
TGTCACCACCAAGCCATTCC+CGG + Chr1:88745550-88745569 MsG0180005220.01.T01:intron 55.0%
TGTTGACGTGCCGCATCTCA+TGG + Chr1:88748688-88748707 MsG0180005220.01.T01:CDS 55.0%
! CATTTTGCCAGTCCCTCCTG+TGG + Chr1:88740656-88740675 MsG0180005220.01.T01:CDS 55.0%
! GCTGATTGGCCAGCAGAGTT+TGG - Chr1:88747111-88747130 None:intergenic 55.0%
!! GAGAGTGTTGCAACCTGCCA+CGG + Chr1:88744654-88744673 MsG0180005220.01.T01:intron 55.0%
!! GGGTGGCTTGATAGTGAGGA+AGG + Chr1:88743787-88743806 MsG0180005220.01.T01:intron 55.0%
!! TGTCGGGTGGCTTGATAGTG+AGG + Chr1:88743783-88743802 MsG0180005220.01.T01:intron 55.0%
AACCAGTTCACGGGCGTCTG+AGG + Chr1:88742828-88742847 MsG0180005220.01.T01:CDS 60.0%
AGCCAAGCCGCATAAGGTGC+TGG - Chr1:88748191-88748210 None:intergenic 60.0%
CCCTGAGAGGTTCCTGCAGT+TGG + Chr1:88748250-88748269 MsG0180005220.01.T01:CDS 60.0%
GCAGCGCATGGCTCAGAAAC+AGG + Chr1:88741059-88741078 MsG0180005220.01.T01:intron 60.0%
TACCTCAGACGCCCGTGAAC+TGG - Chr1:88742833-88742852 None:intergenic 60.0%
TGCGGCACGTCAACAGATCC+AGG - Chr1:88748683-88748702 None:intergenic 60.0%
TTCTGGGCATGCGGAGAACC+AGG - Chr1:88740770-88740789 None:intergenic 60.0%
! AAGGTCCGGGAATGGCTTGG+TGG - Chr1:88745558-88745577 None:intergenic 60.0%
! CACTTGGCTGGGCAAGTTGG+TGG + Chr1:88745388-88745407 MsG0180005220.01.T01:intron 60.0%
!! AGCTCGTGGTGCTACTGAGG+AGG + Chr1:88748316-88748335 MsG0180005220.01.T01:CDS 60.0%
GCATGCGGAGAACCAGGTCC+AGG - Chr1:88740764-88740783 None:intergenic 65.0%
GCGCCTGTCATCGAACCACC+AGG - Chr1:88748812-88748831 None:intergenic 65.0%
GGGTGTTTGCCTCGGACACC+AGG + Chr1:88741867-88741886 MsG0180005220.01.T01:CDS 65.0%
Chromosome Type Strat End Strand Name
Chr1 gene 88740627 88749523 88740627 ID=MsG0180005220.01;Name=MsG0180005220.01
Chr1 mRNA 88740627 88749523 88740627 ID=MsG0180005220.01.T01;Parent=MsG0180005220.01;Name=MsG0180005220.01.T01;_AED=0.34;_eAED=0.35;_QI=0|0.22|0.2|0.9|0.44|0.5|10|538|694
Chr1 exon 88740627 88740796 88740627 ID=MsG0180005220.01.T01:exon:11035;Parent=MsG0180005220.01.T01
Chr1 exon 88741766 88741888 88741766 ID=MsG0180005220.01.T01:exon:11036;Parent=MsG0180005220.01.T01
Chr1 exon 88742056 88742134 88742056 ID=MsG0180005220.01.T01:exon:11037;Parent=MsG0180005220.01.T01
Chr1 exon 88742785 88742849 88742785 ID=MsG0180005220.01.T01:exon:11038;Parent=MsG0180005220.01.T01
Chr1 exon 88742994 88743060 88742994 ID=MsG0180005220.01.T01:exon:11039;Parent=MsG0180005220.01.T01
Chr1 exon 88744270 88744548 88744270 ID=MsG0180005220.01.T01:exon:11040;Parent=MsG0180005220.01.T01
Chr1 exon 88745641 88745807 88745641 ID=MsG0180005220.01.T01:exon:11041;Parent=MsG0180005220.01.T01
Chr1 exon 88746777 88746917 88746777 ID=MsG0180005220.01.T01:exon:11042;Parent=MsG0180005220.01.T01
Chr1 exon 88747755 88748372 88747755 ID=MsG0180005220.01.T01:exon:11043;Parent=MsG0180005220.01.T01
Chr1 exon 88748610 88749523 88748610 ID=MsG0180005220.01.T01:exon:11044;Parent=MsG0180005220.01.T01
Chr1 CDS 88740627 88740796 88740627 ID=MsG0180005220.01.T01:cds;Parent=MsG0180005220.01.T01
Chr1 CDS 88741766 88741888 88741766 ID=MsG0180005220.01.T01:cds;Parent=MsG0180005220.01.T01
Chr1 CDS 88742056 88742134 88742056 ID=MsG0180005220.01.T01:cds;Parent=MsG0180005220.01.T01
Chr1 CDS 88742785 88742849 88742785 ID=MsG0180005220.01.T01:cds;Parent=MsG0180005220.01.T01
Chr1 CDS 88742994 88743060 88742994 ID=MsG0180005220.01.T01:cds;Parent=MsG0180005220.01.T01
Chr1 CDS 88744270 88744548 88744270 ID=MsG0180005220.01.T01:cds;Parent=MsG0180005220.01.T01
Chr1 CDS 88745641 88745807 88745641 ID=MsG0180005220.01.T01:cds;Parent=MsG0180005220.01.T01
Chr1 CDS 88746777 88746917 88746777 ID=MsG0180005220.01.T01:cds;Parent=MsG0180005220.01.T01
Chr1 CDS 88747755 88748372 88747755 ID=MsG0180005220.01.T01:cds;Parent=MsG0180005220.01.T01
Chr1 CDS 88748610 88748985 88748610 ID=MsG0180005220.01.T01:cds;Parent=MsG0180005220.01.T01
Chr1 three_prime_UTR 88748986 88749523 88748986 ID=MsG0180005220.01.T01:three_prime_utr;Parent=MsG0180005220.01.T01
Gene Sequence

>MsG0180005220.01.T01

ATGTCCCTTTTAAAAGCTGGTTTGGTTTTCATTTTGCCAGTCCCTCCTGTGGTGATTCAAAATGATGATTGGACGTGGGACGAACTTTGCTATTACTTGTACGAAGAAATGCATTTGATAACATCGTATTATCACCTGGACCTGGTTCTCCGCATGCCCAGAAGATATAGTGTGGAAGATTATTTATTTGACATCCTTTTTTCTTCAAATGATTTTATATGCTTCAGTATTTGTCTTCAAATATTGCGTGAATGCGGGATATTCCTATTCTGGGTGTTTGCCTCGGACACCAGTGCACTGCATGTCTTGAATTTCGGTCACGTTTTTTTCCTTGCTAACACAGTCTCGCTCTTAATAGTTCATTTTTCTTTGGCATTGGGTTATGTGCATGGAGCTCAAGTTGTCCATGCATCTGAACCAGTTCACGGGCGTCTGAGTGAAGTTGAGCACAATGGGTGCCAACTTTTTCAGGGCATACCTTCTGGTAGAAATTCTGGTTTCAAGGTGGTTCGATATCATTCGCTGGTGATAGATTCTGAATCGCTTCCTGAAGTGCTCATTCCAATAGCATGGACTTCAAATAGGACACTTCCATTTATTGGATCCGAGGTTTTGGACAAGTACAATGGTCATGAACTTCAGACTGATCAAAGCATTTTCCTTGATTCATTTTTGCCTGAAGCAGGAAACGGAAGTTCAAGCCTTGTTGACTATGGACAAACTAGAAATGCAAGGGTTCTTATGGGAGTCAAGCATTCTACAAGGCCACACTATGGTGTGCAGATCAACATAGGATCTCTTCATATTTTGGTAATATACTTCATTTTATACTATATTTTCCATCATCTCAATATTCTTCTCATCCCGATAGGGAAGAGCACGCTTTCGTTCATGGGAGGAAAAGGTGGATCACTTTGGAAGCAGTTAACGTTCAGGTTGTCTGATCAGAGTTCTTTTCCTTTTTGTTACTGTCTCCCTCGTAAATATGTTGCCTTAATAATGTCACAGGAGCTTCAATCATATCGTTATGATAAGGATGAATATGAAGGTCTACCATTTGATTTTCACGGCGGATATGTTGGTTACATCGGGTATGACCTCAAAGTTGAATGTGGTGTCACATGTAACCATCACAAATCTAAAACTCCAGATGCATGTTTTTTCTTTGCTGATAATCTTGTTGCTATTGATCACAAAAATGATGATGTTTATTTATTGGCTATACATGAAGAAAGTTCAAGTATTTCACAATGGTTGGATGATACTGAGGAGAAGCTTCTGAGCTTAACTGGTTCTGTGAGGATGGATTTGGAAAGGCAGTACTCTCATCCTTCAACTTTTTCCTCACATAAGGCTGGTTTCGCAGCTGAAAAATCTAAAGAGCAGTACCTTAGAGATGTTAAGAAGTGTCTAAACTATATTAGAGATGGAGAGAGCTATGAGTTGTGCCTCACAACCCAGATAAGGAAACCGATTGAGGTATTAAATTCTCTTGGACTTTACCTACATTTAAGAGAAAGGAATCCAGCACCTTATGCGGCTTGGCTGAATTTTCCAAAGGAAGATCTGTGTATTTGCTGTTCTTCCCCTGAGAGGTTCCTGCAGTTGGATAGGAGTGATATGCTAGAAGCTAAGCCCATTAAGGGTACTATAGCTCGTGGTGCTACTGAGGAGGAAGACAAACAACTCAAATTGAAATTACAGCTCAGTGAAAAGGATCAGGCGGAAAACCTGATGATTGTTGACCTTCTAAGAAATGACCTTGGTCGTGTATGTGATCCTGGATCTGTTGACGTGCCGCATCTCATGGAAGTACAATCATATGCAACTGTTCACACAATGGTGAGTACAATTCGTGGGAAAAAGAGGTCAGATATAAGTGCTGTAGACTGTGTCAAAGCTGCATTTCCTGGTGGTTCGATGACAGGCGCACCAAAGTTGAGATCAATGGAACTTCTTGATTCTCTTGAAAGTTGTTCTCGAGGCATCTACTCAGGCTGCATTGGATTTTTCTCATATAATCAAACATTTGATCTAAATATTGTCATAAGACAGTTGTTATACATGAGGGTGAAGCTTCCATAG
Protein sequence

>MsG0180005220.01.T01

MSLLKAGLVFILPVPPVVIQNDDWTWDELCYYLYEEMHLITSYYHLDLVLRMPRRYSVEDYLFDILFSSNDFICFSICLQILRECGIFLFWVFASDTSALHVLNFGHVFFLANTVSLLIVHFSLALGYVHGAQVVHASEPVHGRLSEVEHNGCQLFQGIPSGRNSGFKVVRYHSLVIDSESLPEVLIPIAWTSNRTLPFIGSEVLDKYNGHELQTDQSIFLDSFLPEAGNGSSSLVDYGQTRNARVLMGVKHSTRPHYGVQINIGSLHILVIYFILYYIFHHLNILLIPIGKSTLSFMGGKGGSLWKQLTFRLSDQSSFPFCYCLPRKYVALIMSQELQSYRYDKDEYEGLPFDFHGGYVGYIGYDLKVECGVTCNHHKSKTPDACFFFADNLVAIDHKNDDVYLLAIHEESSSISQWLDDTEEKLLSLTGSVRMDLERQYSHPSTFSSHKAGFAAEKSKEQYLRDVKKCLNYIRDGESYELCLTTQIRKPIEVLNSLGLYLHLRERNPAPYAAWLNFPKEDLCICCSSPERFLQLDRSDMLEAKPIKGTIARGATEEEDKQLKLKLQLSEKDQAENLMIVDLLRNDLGRVCDPGSVDVPHLMEVQSYATVHTMVSTIRGKKRSDISAVDCVKAAFPGGSMTGAPKLRSMELLDSLESCSRGIYSGCIGFFSYNQTFDLNIVIRQLLYMRVKLP*