AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0580027243.01

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027243.01.T01 MTR_0021s0370 98.131 321 6 0 1 321 1 321 0.0 654
MsG0580027243.01.T01 MTR_0021s0370 95.763 118 5 0 318 435 204 321 4.64e-70 234
MsG0580027243.01.T01 MTR_0021s0370 95.763 118 5 0 432 549 204 321 4.64e-70 234
MsG0580027243.01.T01 MTR_0021s0370 95.098 102 5 0 546 647 204 305 1.84e-58 203
MsG0580027243.01.T01 MTR_5g053250 97.895 190 4 0 688 877 55 244 1.55e-131 394
MsG0580027243.01.T01 MTR_5g053250 85.714 217 4 1 688 877 55 271 1.87e-126 382
MsG0580027243.01.T01 MTR_5g053250 97.826 184 4 0 694 877 1 184 2.03e-126 378
MsG0580027243.01.T01 MTR_2g100850 40.506 316 174 5 14 321 16 325 1.27e-69 234
MsG0580027243.01.T01 MTR_2g100850 45.238 126 60 3 317 435 202 325 9.83e-26 109
MsG0580027243.01.T01 MTR_2g100850 45.238 126 60 3 431 549 202 325 9.83e-26 109
MsG0580027243.01.T01 MTR_2g100850 39.535 129 63 4 545 666 202 322 7.29e-20 92.0
MsG0580027243.01.T01 MTR_6g017105 50.289 173 85 1 689 860 50 222 3.14e-54 188
MsG0580027243.01.T01 MTR_1g100643 45.294 170 91 2 689 857 49 217 1.21e-42 155
MsG0580027243.01.T01 MTR_1g033360 43.605 172 91 2 689 859 51 217 4.87e-40 147
MsG0580027243.01.T01 MTR_1g100643 43.636 165 91 2 694 857 1 164 1.46e-39 144
MsG0580027243.01.T01 MTR_1g033390 35.329 167 103 2 689 854 45 207 5.54e-32 124
MsG0580027243.01.T01 MTR_0681s0020 25.846 325 204 8 35 328 1462 1780 2.33e-22 104
MsG0580027243.01.T01 MTR_6g071585 61.702 47 18 0 640 686 37 83 3.28e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0580027243.01.T01 AT1G26100 69.898 196 54 2 687 877 41 236 2.04e-83 267
MsG0580027243.01.T01 AT3G21360 41.509 318 173 4 16 321 14 330 8.87e-74 245
MsG0580027243.01.T01 AT3G21360 41.270 126 66 2 317 435 206 330 3.37e-24 105
MsG0580027243.01.T01 AT3G21360 41.270 126 66 2 431 549 206 330 3.37e-24 105
MsG0580027243.01.T01 AT3G21360 35.659 129 69 3 545 666 206 327 1.68e-18 88.2
MsG0580027243.01.T01 AT5G38630 50.000 180 84 3 689 863 50 228 2.86e-55 191
MsG0580027243.01.T01 AT4G25570 45.238 168 90 2 689 855 49 215 8.37e-42 153
MsG0580027243.01.T01 AT4G25570 45.238 168 90 2 689 855 90 256 8.04e-39 146
MsG0580027243.01.T01 AT1G14730 31.937 191 121 3 671 860 41 223 1.61e-24 103

Find 241 sgRNAs with CRISPR-Local

Find 372 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAGTGGCTTTGTTATTT+TGG 0.056164 5:+56913714 MsG0580027243.01.T01:CDS
TCCATCTCTTTCACCTCTTC+TGG 0.099932 5:-56903055 None:intergenic
GCTTTAGCTTCTGGGATATT+TGG 0.112597 5:+56911817 MsG0580027243.01.T01:CDS
CGTTGCAATCATCAAGTTTA+AGG 0.131253 5:-56910771 None:intergenic
CAAGGGGTGGCTTTAGCTTC+TGG 0.175443 5:+56911808 MsG0580027243.01.T01:CDS
GAATGTTTGTGCAGCAATTT+TGG 0.224729 5:+56911729 MsG0580027243.01.T01:intron
TTACCTTGGCATGTATTTCT+TGG 0.229367 5:+56913550 MsG0580027243.01.T01:CDS
TATTAGGCTTCTTGAACTTT+TGG 0.239750 5:+56913491 MsG0580027243.01.T01:CDS
TTGATTTGTGTATCACTCTT+TGG 0.246496 5:+56911910 MsG0580027243.01.T01:CDS
GATAATTATGCTTTGCTTCA+TGG 0.250081 5:+56903698 MsG0580027243.01.T01:CDS
GATAATTATGCTTTGCTTCA+TGG 0.250081 5:+56905652 MsG0580027243.01.T01:CDS
GATAATTATGCTTTGCTTCA+TGG 0.250081 5:+56907606 MsG0580027243.01.T01:CDS
GATAATTATGCTTTGCTTCA+TGG 0.250081 5:+56909560 MsG0580027243.01.T01:CDS
AAAGGGGTCTCTCCTCCTTC+AGG 0.250885 5:-56902989 None:intergenic
GATTTGGAGTCTTTGCTCTT+AGG 0.252278 5:+56901325 MsG0580027243.01.T01:CDS
TGTAGCAACCAGGACTCTTC+TGG 0.253947 5:-56903741 None:intergenic
TGTAGCAACCAGGACTCTTC+TGG 0.253947 5:-56905695 None:intergenic
TGTAGCAACCAGGACTCTTC+TGG 0.253947 5:-56907649 None:intergenic
CTTTAGCTTCTGGGATATTT+GGG 0.267158 5:+56911818 MsG0580027243.01.T01:CDS
CATTTGGATGGGAAGATATT+AGG 0.276672 5:+56901458 MsG0580027243.01.T01:CDS
CTTCTGGGATATTTGGGATT+TGG 0.279862 5:+56911824 MsG0580027243.01.T01:CDS
CCATCTCTTTCACCTCTTCT+GGG 0.281709 5:-56903054 None:intergenic
ATTGCATTGCAGTGGCTATT+AGG 0.294799 5:+56913475 MsG0580027243.01.T01:intron
CTATCACCATGAAATGGTTT+TGG 0.296408 5:+56901561 MsG0580027243.01.T01:CDS
AGAGGGTGGGAGGATGCTTT+TGG 0.296881 5:+56903142 MsG0580027243.01.T01:CDS
CATCCTGTGCTCATGGTCAT+TGG 0.303410 5:+56911577 MsG0580027243.01.T01:CDS
AAGGGGTGGCTTTAGCTTCT+GGG 0.303519 5:+56911809 MsG0580027243.01.T01:CDS
TTAGCAACAACTTTCCCTTT+TGG 0.305849 5:-56910706 None:intergenic
ATTTCTACAGCCTCCATTCA+TGG 0.308509 5:+56911881 MsG0580027243.01.T01:CDS
AATGATATTGTTGAAACATT+TGG 0.317648 5:+56901442 MsG0580027243.01.T01:CDS
TACTACCTTCTCCACTTAAA+AGG 0.321243 5:-56911606 None:intergenic
CCACAATCCCATCATTTACT+TGG 0.326307 5:-56911855 None:intergenic
ATGCTTTGCTTCATGGTAGA+AGG 0.335101 5:+56903705 MsG0580027243.01.T01:CDS
ATGCTTTGCTTCATGGTAGA+AGG 0.335101 5:+56905659 MsG0580027243.01.T01:CDS
ATGCTTTGCTTCATGGTAGA+AGG 0.335101 5:+56907613 MsG0580027243.01.T01:CDS
TCCATGGTTGTAAATTCTTT+AGG 0.339651 5:+56913676 MsG0580027243.01.T01:CDS
TCGTACACATATTTACAAAA+TGG 0.346530 5:+56901498 MsG0580027243.01.T01:CDS
GCAGTAGCAACGGCTGAAAC+TGG 0.360280 5:+56913592 MsG0580027243.01.T01:CDS
AAAGTATTTGAAGGAAGAAA+AGG 0.363004 5:+56903506 MsG0580027243.01.T01:CDS
AAAGTATTTGAAGGAAGAAA+AGG 0.363004 5:+56905460 MsG0580027243.01.T01:CDS
AAAGTATTTGAAGGAAGAAA+AGG 0.363004 5:+56907414 MsG0580027243.01.T01:CDS
AAAGTATTTGAAGGAAGAAA+AGG 0.363004 5:+56909368 MsG0580027243.01.T01:CDS
GTTGTAAATTCTTTAGGCTT+AGG 0.366014 5:+56913682 MsG0580027243.01.T01:CDS
AACAGTGCTGTTCTTCTAAG+AGG 0.372320 5:+56901391 MsG0580027243.01.T01:CDS
CACTTACCAAAACCATTTCA+TGG 0.374794 5:-56901567 None:intergenic
ATGTGGTTTAACACAATTGT+AGG 0.385527 5:+56903536 MsG0580027243.01.T01:CDS
ATGTGGTTTAACACAATTGT+AGG 0.385527 5:+56905490 MsG0580027243.01.T01:CDS
ATGTGGTTTAACACAATTGT+AGG 0.385527 5:+56907444 MsG0580027243.01.T01:CDS
ATGTGGTTTAACACAATTGT+AGG 0.385527 5:+56909398 MsG0580027243.01.T01:CDS
ACTCTGAAGCTTGGAACAAA+AGG 0.391980 5:-56903007 None:intergenic
TGAGGCAAACAAGAGTGATT+TGG 0.392551 5:+56901309 MsG0580027243.01.T01:CDS
TGTATCACTCTTTGGAGCTC+AGG 0.406685 5:+56911918 MsG0580027243.01.T01:CDS
CTTTGAAGAATTTGATACTT+AGG 0.417573 5:-56913748 None:intergenic
TACCTTATCTCAGCTTCCTT+GGG 0.421350 5:-56903175 None:intergenic
CTGCCAATGCATAAGTGTAT+AGG 0.426996 5:-56913573 None:intergenic
AAATGCGAACAGTGAGGATA+AGG 0.435065 5:+56913524 MsG0580027243.01.T01:CDS
ACAAAATTCCAAGTAAATGA+TGG 0.437217 5:+56911847 MsG0580027243.01.T01:CDS
CATTTACTATCACCATGAAA+TGG 0.438317 5:+56901555 MsG0580027243.01.T01:CDS
ATTGTCTTTAGCCCACCATT+TGG 0.441785 5:-56903461 None:intergenic
ATTGTCTTTAGCCCACCATT+TGG 0.441785 5:-56905415 None:intergenic
ATTGTCTTTAGCCCACCATT+TGG 0.441785 5:-56907369 None:intergenic
ATTGTCTTTAGCCCACCATT+TGG 0.441785 5:-56909323 None:intergenic
AAGGGGTCTCTCCTCCTTCA+GGG 0.441809 5:-56902988 None:intergenic
TACAGCCTCCATTCATGGAT+GGG 0.445813 5:+56911886 MsG0580027243.01.T01:CDS
CTCAGCTTCCTTGGGATCTG+AGG 0.447506 5:-56903167 None:intergenic
AATTTAACAAAAGTATTTGA+AGG 0.447996 5:+56903497 MsG0580027243.01.T01:CDS
AATTTAACAAAAGTATTTGA+AGG 0.447996 5:+56905451 MsG0580027243.01.T01:CDS
AATTTAACAAAAGTATTTGA+AGG 0.447996 5:+56907405 MsG0580027243.01.T01:CDS
AATTTAACAAAAGTATTTGA+AGG 0.447996 5:+56909359 MsG0580027243.01.T01:CDS
CATGGACTCAGTGCTGTGTT+TGG 0.448440 5:-56913659 None:intergenic
CTCCCACCCTCTACCTCTCA+TGG 0.449457 5:-56903131 None:intergenic
CCTTCCTCCCAGAAGAGTCC+TGG 0.452012 5:+56903733 MsG0580027243.01.T01:CDS
CCTTCCTCCCAGAAGAGTCC+TGG 0.452012 5:+56905687 MsG0580027243.01.T01:CDS
CCTTCCTCCCAGAAGAGTCC+TGG 0.452012 5:+56907641 MsG0580027243.01.T01:CDS
ATACCTTATCTCAGCTTCCT+TGG 0.454085 5:-56903176 None:intergenic
AAGTATTTGAAGGAAGAAAA+GGG 0.459911 5:+56903507 MsG0580027243.01.T01:CDS
AAGTATTTGAAGGAAGAAAA+GGG 0.459911 5:+56905461 MsG0580027243.01.T01:CDS
AAGTATTTGAAGGAAGAAAA+GGG 0.459911 5:+56907415 MsG0580027243.01.T01:CDS
AAGTATTTGAAGGAAGAAAA+GGG 0.459911 5:+56909369 MsG0580027243.01.T01:CDS
CTCTGAAGCTTGGAACAAAA+GGG 0.463626 5:-56903006 None:intergenic
GTGAAAGAGATGGAAGAGAA+GGG 0.466712 5:+56903064 MsG0580027243.01.T01:CDS
TCGGTGCATTTATGTCTTCA+AGG 0.466772 5:+56911790 MsG0580027243.01.T01:CDS
ATTTAGTTGCAAGGAGTTCA+AGG 0.469776 5:+56901222 MsG0580027243.01.T01:CDS
CTCTGTTCCATCTGCCATTG+TGG 0.473480 5:-56903585 None:intergenic
CTCTGTTCCATCTGCCATTG+TGG 0.473480 5:-56905539 None:intergenic
CTCTGTTCCATCTGCCATTG+TGG 0.473480 5:-56907493 None:intergenic
CTCTGTTCCATCTGCCATTG+TGG 0.473480 5:-56909447 None:intergenic
CCAGGACTCTTCTGGGAGGA+AGG 0.474617 5:-56903733 None:intergenic
CCAGGACTCTTCTGGGAGGA+AGG 0.474617 5:-56905687 None:intergenic
CCAGGACTCTTCTGGGAGGA+AGG 0.474617 5:-56907641 None:intergenic
CTTTCTGTCACTCTGAAGCT+TGG 0.474797 5:-56903016 None:intergenic
GGTTCTCCATCCTGTGCTCA+TGG 0.477323 5:+56911570 MsG0580027243.01.T01:intron
GTAGCAACCAGGACTCTTCT+GGG 0.483438 5:-56903740 None:intergenic
GTAGCAACCAGGACTCTTCT+GGG 0.483438 5:-56905694 None:intergenic
GTAGCAACCAGGACTCTTCT+GGG 0.483438 5:-56907648 None:intergenic
ACTCTTCTGGGAGGAAGGGA+AGG 0.485961 5:-56903728 None:intergenic
ACTCTTCTGGGAGGAAGGGA+AGG 0.485961 5:-56905682 None:intergenic
ACTCTTCTGGGAGGAAGGGA+AGG 0.485961 5:-56907636 None:intergenic
AACACAATTGTAGGCATGCA+TGG 0.486233 5:+56903545 MsG0580027243.01.T01:CDS
AACACAATTGTAGGCATGCA+TGG 0.486233 5:+56905499 MsG0580027243.01.T01:CDS
AACACAATTGTAGGCATGCA+TGG 0.486233 5:+56907453 MsG0580027243.01.T01:CDS
AACACAATTGTAGGCATGCA+TGG 0.486233 5:+56909407 MsG0580027243.01.T01:CDS
CACATATTTACAAAATGGTA+TGG 0.488978 5:+56901503 MsG0580027243.01.T01:CDS
TAAATATGTGTACGAGGTGC+TGG 0.491863 5:-56901490 None:intergenic
TGGGAAGATATTAGGTATGT+TGG 0.493040 5:+56901466 MsG0580027243.01.T01:CDS
CTACAGCCTCCATTCATGGA+TGG 0.495357 5:+56911885 MsG0580027243.01.T01:CDS
GTTTGAATAAGAACAAAGAA+TGG 0.498898 5:+56901347 MsG0580027243.01.T01:CDS
TAAGATGGAATTTAGTTGCA+AGG 0.498972 5:+56901213 None:intergenic
GGTGAAAGAGATGGAAGAGA+AGG 0.502432 5:+56903063 MsG0580027243.01.T01:CDS
CGGTGCATTTATGTCTTCAA+GGG 0.507370 5:+56911791 MsG0580027243.01.T01:CDS
ATACAATTCAAGTGGGAGAA+AGG 0.508427 5:+56903659 MsG0580027243.01.T01:CDS
ATACAATTCAAGTGGGAGAA+AGG 0.508427 5:+56905613 MsG0580027243.01.T01:CDS
ATACAATTCAAGTGGGAGAA+AGG 0.508427 5:+56907567 MsG0580027243.01.T01:CDS
ATACAATTCAAGTGGGAGAA+AGG 0.508427 5:+56909521 MsG0580027243.01.T01:CDS
TCACTGTTCGCATTTCTCCT+CGG 0.512543 5:-56913516 None:intergenic
TATTACAGGGCAAAAGCTCT+AGG 0.513870 5:+56903419 MsG0580027243.01.T01:intron
TATTACAGGGCAAAAGCTCT+AGG 0.513870 5:+56905373 MsG0580027243.01.T01:intron
TATTACAGGGCAAAAGCTCT+AGG 0.513870 5:+56907327 MsG0580027243.01.T01:intron
TATTACAGGGCAAAAGCTCT+AGG 0.513870 5:+56909281 MsG0580027243.01.T01:intron
TTCCAGCACATGTAGTGAAA+AGG 0.514892 5:+56903609 MsG0580027243.01.T01:CDS
TTCCAGCACATGTAGTGAAA+AGG 0.514892 5:+56905563 MsG0580027243.01.T01:CDS
TTCCAGCACATGTAGTGAAA+AGG 0.514892 5:+56907517 MsG0580027243.01.T01:CDS
TTCCAGCACATGTAGTGAAA+AGG 0.514892 5:+56909471 MsG0580027243.01.T01:CDS
GGTGGGCTAAAGACAATACT+TGG 0.518323 5:+56903467 MsG0580027243.01.T01:CDS
GGTGGGCTAAAGACAATACT+TGG 0.518323 5:+56905421 MsG0580027243.01.T01:CDS
GGTGGGCTAAAGACAATACT+TGG 0.518323 5:+56907375 MsG0580027243.01.T01:CDS
GGTGGGCTAAAGACAATACT+TGG 0.518323 5:+56909329 MsG0580027243.01.T01:CDS
TTGGTGCATAGATGGTTACC+AGG 0.520836 5:+56911748 MsG0580027243.01.T01:CDS
AAATCAAACCCATCCATGAA+TGG 0.521917 5:-56911894 None:intergenic
GTGTGAAGGAGAGAAAATAG+TGG 0.524214 5:+56901252 MsG0580027243.01.T01:CDS
AGAACCTCCATGAGAGGTAG+AGG 0.524600 5:+56903124 MsG0580027243.01.T01:CDS
CAAACACAGCACTGAGTCCA+TGG 0.530906 5:+56913660 MsG0580027243.01.T01:CDS
TAGATGGTTACCAGGGTCAA+GGG 0.534594 5:+56911756 MsG0580027243.01.T01:CDS
TAAGAACAAAGAATGGTTTG+AGG 0.534884 5:+56901354 MsG0580027243.01.T01:CDS
CAAAATTCCAAGTAAATGAT+GGG 0.535853 5:+56911848 MsG0580027243.01.T01:CDS
CCAAGTAAATGATGGGATTG+TGG 0.538655 5:+56911855 MsG0580027243.01.T01:CDS
AGGGGTCTCTCCTCCTTCAG+GGG 0.539966 5:-56902987 None:intergenic
TTCAAGGTGGGAAAGTGTGA+AGG 0.541079 5:+56901238 MsG0580027243.01.T01:CDS
GCATTTATGTCTTCAAGGGG+TGG 0.549961 5:+56911795 MsG0580027243.01.T01:CDS
CAGGACTCTTCTGGGAGGAA+GGG 0.551334 5:-56903732 None:intergenic
CAGGACTCTTCTGGGAGGAA+GGG 0.551334 5:-56905686 None:intergenic
CAGGACTCTTCTGGGAGGAA+GGG 0.551334 5:-56907640 None:intergenic
ATAGATGGTTACCAGGGTCA+AGG 0.552559 5:+56911755 MsG0580027243.01.T01:CDS
TGAAAGAGATGGAAGAGAAG+GGG 0.552779 5:+56903065 MsG0580027243.01.T01:CDS
TGGCCTATACACTTATGCAT+TGG 0.552843 5:+56913570 MsG0580027243.01.T01:CDS
AGCTCAGCCACAATGGCAGA+TGG 0.554661 5:+56903578 MsG0580027243.01.T01:CDS
AGCTCAGCCACAATGGCAGA+TGG 0.554661 5:+56905532 MsG0580027243.01.T01:CDS
AGCTCAGCCACAATGGCAGA+TGG 0.554661 5:+56907486 MsG0580027243.01.T01:CDS
AGCTCAGCCACAATGGCAGA+TGG 0.554661 5:+56909440 MsG0580027243.01.T01:CDS
ATCCCAAGGAAGCTGAGATA+AGG 0.559065 5:+56903173 MsG0580027243.01.T01:CDS
GAAGGAGAGAAAATAGTGGA+TGG 0.559093 5:+56901256 MsG0580027243.01.T01:CDS
TCACTCTTGTTTGCCTCACG+AGG 0.564804 5:-56901304 None:intergenic
CCCAGAAGAGGTGAAAGAGA+TGG 0.571109 5:+56903054 MsG0580027243.01.T01:CDS
AGGCCAAGAAATACATGCCA+AGG 0.572983 5:-56913553 None:intergenic
AAGAGAGCATACAATTCAAG+TGG 0.573174 5:+56903651 MsG0580027243.01.T01:CDS
AAGAGAGCATACAATTCAAG+TGG 0.573174 5:+56905605 MsG0580027243.01.T01:CDS
AAGAGAGCATACAATTCAAG+TGG 0.573174 5:+56907559 MsG0580027243.01.T01:CDS
AAGAGAGCATACAATTCAAG+TGG 0.573174 5:+56909513 MsG0580027243.01.T01:CDS
GGATGGAGAAACAATTCCAT+TGG 0.575112 5:+56901273 MsG0580027243.01.T01:CDS
ATTACTTGGTTGTAGCAACC+AGG 0.576965 5:-56903751 None:intergenic
ATTACTTGGTTGTAGCAACC+AGG 0.576965 5:-56905705 None:intergenic
ATTACTTGGTTGTAGCAACC+AGG 0.576965 5:-56907659 None:intergenic
TCACGAGGTTGTAGTACCAA+TGG 0.578723 5:-56901289 None:intergenic
TTATGCATTGGCAGTAGCAA+CGG 0.579204 5:+56913582 MsG0580027243.01.T01:CDS
GAAGAAAAGGGAGAAGAATG+TGG 0.579530 5:+56903519 MsG0580027243.01.T01:CDS
GAAGAAAAGGGAGAAGAATG+TGG 0.579530 5:+56905473 MsG0580027243.01.T01:CDS
GAAGAAAAGGGAGAAGAATG+TGG 0.579530 5:+56907427 MsG0580027243.01.T01:CDS
GAAGAAAAGGGAGAAGAATG+TGG 0.579530 5:+56909381 MsG0580027243.01.T01:CDS
AGTTGCAAGGAGTTCAAGGT+GGG 0.579652 5:+56901226 MsG0580027243.01.T01:CDS
GTAGAGTGGCTTCCAAATGG+TGG 0.581976 5:+56903449 MsG0580027243.01.T01:CDS
GTAGAGTGGCTTCCAAATGG+TGG 0.581976 5:+56905403 MsG0580027243.01.T01:CDS
GTAGAGTGGCTTCCAAATGG+TGG 0.581976 5:+56907357 MsG0580027243.01.T01:CDS
GTAGAGTGGCTTCCAAATGG+TGG 0.581976 5:+56909311 MsG0580027243.01.T01:CDS
AGATGGTTACCAGGGTCAAG+GGG 0.583358 5:+56911757 MsG0580027243.01.T01:CDS
AGTGACAGAAAGGATGATTG+AGG 0.583390 5:+56903027 MsG0580027243.01.T01:CDS
CAAGCTTCAGAGTGACAGAA+AGG 0.583716 5:+56903017 MsG0580027243.01.T01:CDS
ATGGTATGGACTGCTAATGA+AGG 0.585704 5:+56901517 MsG0580027243.01.T01:CDS
GCCTAAAGAATTTACAACCA+TGG 0.590393 5:-56913677 None:intergenic
CAGGGCAAAAGCTCTAGGAA+TGG 0.590538 5:+56903424 MsG0580027243.01.T01:intron
CAGGGCAAAAGCTCTAGGAA+TGG 0.590538 5:+56905378 MsG0580027243.01.T01:intron
CAGGGCAAAAGCTCTAGGAA+TGG 0.590538 5:+56907332 MsG0580027243.01.T01:intron
CAGGGCAAAAGCTCTAGGAA+TGG 0.590538 5:+56909286 MsG0580027243.01.T01:intron
GGGGTCTCTCCTCCTTCAGG+GGG 0.592857 5:-56902986 None:intergenic
TTAGGTCTTGCTCTCCTCAG+TGG 0.593520 5:+56913700 MsG0580027243.01.T01:CDS
AATTGTAGGCATGCATGGAA+AGG 0.595861 5:+56903550 MsG0580027243.01.T01:CDS
AATTGTAGGCATGCATGGAA+AGG 0.595861 5:+56905504 MsG0580027243.01.T01:CDS
AATTGTAGGCATGCATGGAA+AGG 0.595861 5:+56907458 MsG0580027243.01.T01:CDS
AATTGTAGGCATGCATGGAA+AGG 0.595861 5:+56909412 MsG0580027243.01.T01:CDS
ATATTGTTGAAACATTTGGA+TGG 0.596734 5:+56901446 MsG0580027243.01.T01:CDS
TAGAGTGGCTTCCAAATGGT+GGG 0.599294 5:+56903450 MsG0580027243.01.T01:CDS
TAGAGTGGCTTCCAAATGGT+GGG 0.599294 5:+56905404 MsG0580027243.01.T01:CDS
TAGAGTGGCTTCCAAATGGT+GGG 0.599294 5:+56907358 MsG0580027243.01.T01:CDS
TAGAGTGGCTTCCAAATGGT+GGG 0.599294 5:+56909312 MsG0580027243.01.T01:CDS
TATTGTTGAAACATTTGGAT+GGG 0.603040 5:+56901447 MsG0580027243.01.T01:CDS
ATAGTAAATGAACTCTGAGA+GGG 0.607378 5:-56901542 None:intergenic
CTCTAGGAATGGATGTAGAG+TGG 0.611291 5:+56903435 MsG0580027243.01.T01:CDS
CTCTAGGAATGGATGTAGAG+TGG 0.611291 5:+56905389 MsG0580027243.01.T01:CDS
CTCTAGGAATGGATGTAGAG+TGG 0.611291 5:+56907343 MsG0580027243.01.T01:CDS
CTCTAGGAATGGATGTAGAG+TGG 0.611291 5:+56909297 MsG0580027243.01.T01:CDS
AAACCAATGACCATGAGCAC+AGG 0.612548 5:-56911580 None:intergenic
CCTCCATGAGAGGTAGAGGG+TGG 0.613917 5:+56903128 MsG0580027243.01.T01:CDS
GAGGTTCTATCACTATTACT+AGG 0.615284 5:-56903109 None:intergenic
GATGTAGAGTGGCTTCCAAA+TGG 0.616918 5:+56903446 MsG0580027243.01.T01:CDS
GATGTAGAGTGGCTTCCAAA+TGG 0.616918 5:+56905400 MsG0580027243.01.T01:CDS
GATGTAGAGTGGCTTCCAAA+TGG 0.616918 5:+56907354 MsG0580027243.01.T01:CDS
GATGTAGAGTGGCTTCCAAA+TGG 0.616918 5:+56909308 MsG0580027243.01.T01:CDS
GGAGATTAGCTCAGCCACAA+TGG 0.622194 5:+56903571 MsG0580027243.01.T01:CDS
GGAGATTAGCTCAGCCACAA+TGG 0.622194 5:+56905525 MsG0580027243.01.T01:CDS
GGAGATTAGCTCAGCCACAA+TGG 0.622194 5:+56907479 MsG0580027243.01.T01:CDS
GGAGATTAGCTCAGCCACAA+TGG 0.622194 5:+56909433 MsG0580027243.01.T01:CDS
CAATGACCATGAGCACAGGA+TGG 0.626720 5:-56911576 None:intergenic
TGAGGATAAGGATCTTACCT+TGG 0.627849 5:+56913536 MsG0580027243.01.T01:CDS
AGAGAGCATACAATTCAAGT+GGG 0.633190 5:+56903652 MsG0580027243.01.T01:CDS
AGAGAGCATACAATTCAAGT+GGG 0.633190 5:+56905606 MsG0580027243.01.T01:CDS
AGAGAGCATACAATTCAAGT+GGG 0.633190 5:+56907560 MsG0580027243.01.T01:CDS
AGAGAGCATACAATTCAAGT+GGG 0.633190 5:+56909514 MsG0580027243.01.T01:CDS
CATGAGAGGTAGAGGGTGGG+AGG 0.634475 5:+56903132 MsG0580027243.01.T01:CDS
CTCCATGAGAGGTAGAGGGT+GGG 0.643110 5:+56903129 MsG0580027243.01.T01:CDS
GCACATGTAGTGAAAAGGTG+TGG 0.645188 5:+56903614 MsG0580027243.01.T01:CDS
GCACATGTAGTGAAAAGGTG+TGG 0.645188 5:+56905568 MsG0580027243.01.T01:CDS
GCACATGTAGTGAAAAGGTG+TGG 0.645188 5:+56907522 MsG0580027243.01.T01:CDS
GCACATGTAGTGAAAAGGTG+TGG 0.645188 5:+56909476 MsG0580027243.01.T01:CDS
TCAAACCCATCCATGAATGG+AGG 0.645855 5:-56911891 None:intergenic
CCAAAATAACAAAGCCACTG+AGG 0.646081 5:-56913714 None:intergenic
GGTGCATTTATGTCTTCAAG+GGG 0.646132 5:+56911792 MsG0580027243.01.T01:CDS
AGTGATAGAACCTCCATGAG+AGG 0.646755 5:+56903118 MsG0580027243.01.T01:CDS
GATAGTAAATGAACTCTGAG+AGG 0.648877 5:-56901543 None:intergenic
TGGTGCATAGATGGTTACCA+GGG 0.648951 5:+56911749 MsG0580027243.01.T01:CDS
TCTGAAGCTTGGAACAAAAG+GGG 0.650493 5:-56903005 None:intergenic
GATTGAGGAGTTCCCAGAAG+AGG 0.665095 5:+56903042 MsG0580027243.01.T01:CDS
ATTGGTACTACAACCTCGTG+AGG 0.665250 5:+56901291 MsG0580027243.01.T01:CDS
GAACCTCCATGAGAGGTAGA+GGG 0.668549 5:+56903125 MsG0580027243.01.T01:CDS
TAGTTGCAAGGAGTTCAAGG+TGG 0.669091 5:+56901225 MsG0580027243.01.T01:CDS
AGTAAATGAACTCTGAGAGG+GGG 0.676350 5:-56901540 None:intergenic
GATGGTTACCAGGGTCAAGG+GGG 0.681374 5:+56911758 MsG0580027243.01.T01:CDS
CCACCCTCTACCTCTCATGG+AGG 0.685807 5:-56903128 None:intergenic
TAGTAAATGAACTCTGAGAG+GGG 0.703606 5:-56901541 None:intergenic
GAGGAGAAATGCGAACAGTG+AGG 0.732322 5:+56913518 MsG0580027243.01.T01:CDS
GCAACCAGGACTCTTCTGGG+AGG 0.758208 5:-56903737 None:intergenic
GCAACCAGGACTCTTCTGGG+AGG 0.758208 5:-56905691 None:intergenic
GCAACCAGGACTCTTCTGGG+AGG 0.758208 5:-56907645 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACATGTTAATTATTAAT+TGG - Chr5:56902805-56902824 None:intergenic 10.0%
!! AAATTTGAAAAGAATTTAAA+AGG + Chr5:56904719-56904738 MsG0580027243.01.T01:intron 10.0%
!! AGTTTAAATTAAAAGTTTAA+TGG - Chr5:56912594-56912613 None:intergenic 10.0%
!! ATAGATAGATTAATTATTAT+GGG + Chr5:56902830-56902849 MsG0580027243.01.T01:intron 10.0%
!! TATAGATAGATTAATTATTA+TGG + Chr5:56902829-56902848 MsG0580027243.01.T01:intron 10.0%
!! TTAGCTATTAATTTAAAAAT+CGG + Chr5:56913297-56913316 MsG0580027243.01.T01:intron 10.0%
!! TTTGTAAAAAAAAAAAATGA+AGG - Chr5:56902900-56902919 None:intergenic 10.0%
!!! AAGTAACTTTTAATATATAT+TGG - Chr5:56911187-56911206 None:intergenic 10.0%
!!! AATTAATCTTTTTTTTTTTG+TGG - Chr5:56902868-56902887 None:intergenic 10.0%
!!! CGAAATAAATTTTAATTTTT+CGG - Chr5:56913183-56913202 None:intergenic 10.0%
!!! TAAATATTAGTTTATTTGAA+GGG - Chr5:56903210-56903229 None:intergenic 10.0%
!!! TTTATTTTCTTTGTAAATTA+TGG - Chr5:56905171-56905190 None:intergenic 10.0%
!!! TTTTATTTTAATTTAATTGC+AGG + Chr5:56911549-56911568 MsG0580027243.01.T01:intron 10.0%
!!! TTTTTTTTTTTACAAAAATG+GGG + Chr5:56902904-56902923 MsG0580027243.01.T01:intron 10.0%
!! AAATGACAAATAGTTAAAAT+TGG + Chr5:56902778-56902797 MsG0580027243.01.T01:intron 15.0%
!! AAGTAAATATGTGAATTAAT+CGG + Chr5:56902643-56902662 MsG0580027243.01.T01:intron 15.0%
!! AATATTCAATTACAATCATA+TGG - Chr5:56904444-56904463 None:intergenic 15.0%
!! ACAAATAATATGAAATTACT+TGG - Chr5:56903768-56903787 None:intergenic 15.0%
!! ATGCAAATTTATTAATTAAG+AGG - Chr5:56912895-56912914 None:intergenic 15.0%
!! GTTATTGTAATTAAAATGAT+AGG + Chr5:56913229-56913248 MsG0580027243.01.T01:intron 15.0%
!! TCAATAATGAATTAATAATG+TGG + Chr5:56901753-56901772 MsG0580027243.01.T01:intron 15.0%
!! TTAATAAATTTGCATAGTAT+AGG + Chr5:56912900-56912919 MsG0580027243.01.T01:intron 15.0%
!!! AATACTAAAGAAAATCATTT+TGG - Chr5:56901835-56901854 None:intergenic 15.0%
!!! AATACTTTTGTTAAATTTCT+TGG - Chr5:56903494-56903513 None:intergenic 15.0%
!!! AATATCCACATAATATTTTT+GGG - Chr5:56911647-56911666 None:intergenic 15.0%
!!! AATTTAACAAAAGTATTTGA+AGG + Chr5:56903497-56903516 MsG0580027243.01.T01:CDS 15.0%
!!! ACTTTAAAGTATTAGATTTA+TGG - Chr5:56902015-56902034 None:intergenic 15.0%
!!! CTCTAAATTAATTTTTACTT+AGG + Chr5:56911982-56912001 MsG0580027243.01.T01:intron 15.0%
!!! GGTTTTGATTTAAATAAAAA+GGG - Chr5:56911515-56911534 None:intergenic 15.0%
!!! GTAAATATTAGTTTATTTGA+AGG - Chr5:56903211-56903230 None:intergenic 15.0%
!!! TAGTGTATACATAATTTTTT+GGG + Chr5:56913375-56913394 MsG0580027243.01.T01:intron 15.0%
!!! TATACTCTTTTAATTTGTTT+AGG - Chr5:56901687-56901706 None:intergenic 15.0%
!!! TGAAAAATATATAACTTGTA+AGG + Chr5:56901981-56902000 MsG0580027243.01.T01:intron 15.0%
!!! TGGTTTTGATTTAAATAAAA+AGG - Chr5:56911516-56911535 None:intergenic 15.0%
!!! TTAGTGTATACATAATTTTT+TGG + Chr5:56913374-56913393 MsG0580027243.01.T01:intron 15.0%
!!! TTTAAAATACAAAAAGAAGT+CGG + Chr5:56911145-56911164 MsG0580027243.01.T01:intron 15.0%
!! AATAAAAACCAAAGATATGT+AGG + Chr5:56901896-56901915 MsG0580027243.01.T01:intron 20.0%
!! AATAAAATAAAGCTTATGCA+TGG - Chr5:56911536-56911555 None:intergenic 20.0%
!! AATGATATTGTTGAAACATT+TGG + Chr5:56901442-56901461 MsG0580027243.01.T01:CDS 20.0%
!! AATTATGATCAATGGAAATT+AGG - Chr5:56904476-56904495 None:intergenic 20.0%
!! AGCTAAATATCTTGTAAAAA+AGG - Chr5:56913283-56913302 None:intergenic 20.0%
!! ATTAAAAAGAACATGAAAGT+AGG - Chr5:56912417-56912436 None:intergenic 20.0%
!! ATTCAATCAATTCTATTACA+GGG + Chr5:56903406-56903425 MsG0580027243.01.T01:intron 20.0%
!! GAAAAGAATTTAAAAGGAAT+AGG + Chr5:56904725-56904744 MsG0580027243.01.T01:intron 20.0%
!! GTTGATATATTCTTTATCTT+AGG + Chr5:56903996-56904015 MsG0580027243.01.T01:intron 20.0%
!! TAACAAAATCAAGTCATTAT+TGG + Chr5:56911672-56911691 MsG0580027243.01.T01:intron 20.0%
!! TACTGAAATTAAAGAGTTAA+AGG - Chr5:56904385-56904404 None:intergenic 20.0%
!! TGATCATACATAACATATAT+TGG - Chr5:56903833-56903852 None:intergenic 20.0%
!! TTAATTAAGAGGAATACATT+TGG - Chr5:56912884-56912903 None:intergenic 20.0%
!!! AATAGATATTGATTGATTTG+AGG + Chr5:56912107-56912126 MsG0580027243.01.T01:intron 20.0%
!!! AGTGTATACATAATTTTTTG+GGG + Chr5:56913376-56913395 MsG0580027243.01.T01:intron 20.0%
!!! ATAATCTAAAATTGAAAACC+AGG + Chr5:56912762-56912781 MsG0580027243.01.T01:intron 20.0%
!!! ATTTTTATTTCCTGATGAAT+AGG - Chr5:56912084-56912103 None:intergenic 20.0%
!!! CAATATCCACATAATATTTT+TGG - Chr5:56911648-56911667 None:intergenic 20.0%
!!! CAGAATAGAATCAATTTTTT+TGG - Chr5:56902956-56902975 None:intergenic 20.0%
!!! GACAATTTTAAATGTTTTGA+TGG - Chr5:56912482-56912501 None:intergenic 20.0%
!!! GGATTTGACAAATATTTTAT+AGG - Chr5:56901666-56901685 None:intergenic 20.0%
!!! GTGTATAGATATTTTATGTA+TGG + Chr5:56913408-56913427 MsG0580027243.01.T01:intron 20.0%
!!! TAAACATTTTCAACATTTAG+TGG + Chr5:56904262-56904281 MsG0580027243.01.T01:intron 20.0%
!!! TACATATCTTTGGTTTTTAT+TGG - Chr5:56901897-56901916 None:intergenic 20.0%
!!! TTAACTTGTTGTACAAATTT+AGG + Chr5:56912390-56912409 MsG0580027243.01.T01:intron 20.0%
!!! TTGAAATGATTTTATGTCTT+TGG - Chr5:56905056-56905075 None:intergenic 20.0%
!!! TTTAGCTTATGAATGATTTT+TGG + Chr5:56912166-56912185 MsG0580027243.01.T01:intron 20.0%
!!! TTTATCGACTTTTGTATTTT+AGG + Chr5:56913015-56913034 MsG0580027243.01.T01:intron 20.0%
!!! TTTATCTACATTTGTTGATT+CGG + Chr5:56904036-56904055 MsG0580027243.01.T01:intron 20.0%
! AAGTATTTGAAGGAAGAAAA+GGG + Chr5:56903507-56903526 MsG0580027243.01.T01:CDS 25.0%
! AATATGCATTAAATACGTGA+CGG + Chr5:56912219-56912238 MsG0580027243.01.T01:intron 25.0%
! ACAAAATTCCAAGTAAATGA+TGG + Chr5:56911847-56911866 MsG0580027243.01.T01:CDS 25.0%
! AGATTATATGATAGTTGACT+TGG - Chr5:56912749-56912768 None:intergenic 25.0%
! ATATTGTTGAAACATTTGGA+TGG + Chr5:56901446-56901465 MsG0580027243.01.T01:CDS 25.0%
! ATTGTACTAACAAGCTAAAT+TGG - Chr5:56912274-56912293 None:intergenic 25.0%
! CAAAATTCCAAGTAAATGAT+GGG + Chr5:56911848-56911867 MsG0580027243.01.T01:CDS 25.0%
! CACATATTTACAAAATGGTA+TGG + Chr5:56901503-56901522 MsG0580027243.01.T01:CDS 25.0%
! CATACATAACATATATTGGT+GGG - Chr5:56903829-56903848 None:intergenic 25.0%
! CATTCAATCAATTCTATTAC+AGG + Chr5:56903405-56903424 MsG0580027243.01.T01:intron 25.0%
! GAATGTAATATGATATGTGT+CGG - Chr5:56903288-56903307 None:intergenic 25.0%
! GATATTGTCTAACAATTATG+AGG + Chr5:56904780-56904799 MsG0580027243.01.T01:intron 25.0%
! GTATTCACAATTATGATCAA+TGG - Chr5:56904484-56904503 None:intergenic 25.0%
! GTTTGAATAAGAACAAAGAA+TGG + Chr5:56901347-56901366 MsG0580027243.01.T01:CDS 25.0%
! TATTGTTGAAACATTTGGAT+GGG + Chr5:56901447-56901466 MsG0580027243.01.T01:CDS 25.0%
! TCATACATAACATATATTGG+TGG - Chr5:56903830-56903849 None:intergenic 25.0%
! TCGTACACATATTTACAAAA+TGG + Chr5:56901498-56901517 MsG0580027243.01.T01:CDS 25.0%
! TCTAACAATTATGAGGTAAT+AGG + Chr5:56904787-56904806 MsG0580027243.01.T01:intron 25.0%
! TGAATTAATAATGTGGAACT+AGG + Chr5:56901760-56901779 MsG0580027243.01.T01:intron 25.0%
! TGTCACACTTATTTATATCA+TGG - Chr5:56903799-56903818 None:intergenic 25.0%
! TTAATTCAAGAGTTTAACGA+TGG + Chr5:56912432-56912451 MsG0580027243.01.T01:intron 25.0%
! TTCAAAAATTCGATATGCAT+CGG - Chr5:56913328-56913347 None:intergenic 25.0%
!! AAAGTATTTGAAGGAAGAAA+AGG + Chr5:56903506-56903525 MsG0580027243.01.T01:CDS 25.0%
!! AATATTTTATAGGACAGAGA+AGG - Chr5:56901656-56901675 None:intergenic 25.0%
!! AGGTAATGAAATTTTTGCAT+CGG + Chr5:56904217-56904236 MsG0580027243.01.T01:intron 25.0%
!! ATATATAACTTGTAAGGAAG+AGG + Chr5:56901987-56902006 MsG0580027243.01.T01:intron 25.0%
!! ATCAATGGAAATTAGGTTTT+AGG - Chr5:56904469-56904488 None:intergenic 25.0%
!! ATTTTGTAAATATGTGTACG+AGG - Chr5:56901499-56901518 None:intergenic 25.0%
!! CTTTGAAGAATTTGATACTT+AGG - Chr5:56913751-56913770 None:intergenic 25.0%
!! GTTTTGTATTTTCCTTCTTT+GGG - Chr5:56912319-56912338 None:intergenic 25.0%
!! TTAAATTGCATTGATACACT+TGG + Chr5:56912946-56912965 MsG0580027243.01.T01:intron 25.0%
!! TTCAAATAACACAACTCTTT+TGG - Chr5:56905118-56905137 None:intergenic 25.0%
!! TTTTTGGATATTCCTTAATC+TGG - Chr5:56902940-56902959 None:intergenic 25.0%
!!! AATGCATTTGTTGTTTTCTA+CGG - Chr5:56913355-56913374 None:intergenic 25.0%
!!! ATTGGTTTTATCCTTTTAAG+TGG + Chr5:56911595-56911614 MsG0580027243.01.T01:CDS 25.0%
!!! TTAACTTGTTAGTGTTTGAA+TGG + Chr5:56903342-56903361 MsG0580027243.01.T01:intron 25.0%
AACACATACCTACATATCTT+TGG - Chr5:56901907-56901926 None:intergenic 30.0%
AATAGGTGTCAAGATATAAC+TGG - Chr5:56912067-56912086 None:intergenic 30.0%
AATTCAATGACCTTGCATAT+CGG + Chr5:56904510-56904529 MsG0580027243.01.T01:intron 30.0%
AGCAACCCAAAAATATTATG+TGG + Chr5:56911639-56911658 MsG0580027243.01.T01:intron 30.0%
ATCGCTCAAATAAAAAGTAG+AGG - Chr5:56912629-56912648 None:intergenic 30.0%
ATCTATTACAACGATAAGCT+AGG - Chr5:56904763-56904782 None:intergenic 30.0%
ATGATTGCAACGTAAATCTT+AGG + Chr5:56904920-56904939 MsG0580027243.01.T01:intron 30.0%
ATGTGGTTTAACACAATTGT+AGG + Chr5:56903536-56903555 MsG0580027243.01.T01:CDS 30.0%
CAAAAAGTTTGACAACAAGA+GGG + Chr5:56912794-56912813 MsG0580027243.01.T01:intron 30.0%
CATTTACTATCACCATGAAA+TGG + Chr5:56901555-56901574 MsG0580027243.01.T01:CDS 30.0%
GAATGTAATATGACATGTGT+CGG - Chr5:56903390-56903409 None:intergenic 30.0%
GATAATTATGCTTTGCTTCA+TGG + Chr5:56903698-56903717 MsG0580027243.01.T01:CDS 30.0%
GGACTTAAATAACCAGATTA+AGG + Chr5:56902925-56902944 MsG0580027243.01.T01:intron 30.0%
GTTGTAAATTCTTTAGGCTT+AGG + Chr5:56913682-56913701 MsG0580027243.01.T01:CDS 30.0%
GTTGTTGCTAACAAAAATGT+TGG + Chr5:56904856-56904875 MsG0580027243.01.T01:intron 30.0%
TAAGAACAAAGAATGGTTTG+AGG + Chr5:56901354-56901373 MsG0580027243.01.T01:CDS 30.0%
TATACATCTTATGAGTTACG+CGG - Chr5:56903917-56903936 None:intergenic 30.0%
TCCATGGTTGTAAATTCTTT+AGG + Chr5:56913676-56913695 MsG0580027243.01.T01:CDS 30.0%
TCTATTACAACGATAAGCTA+GGG - Chr5:56904762-56904781 None:intergenic 30.0%
TTAAAAACCTTGACCCAAAA+GGG + Chr5:56904830-56904849 MsG0580027243.01.T01:intron 30.0%
TTGATTGTTAGAATGCTTGT+AGG - Chr5:56904136-56904155 None:intergenic 30.0%
TTTATTTATTGTTGTGCCCA+TGG + Chr5:56902291-56902310 MsG0580027243.01.T01:intron 30.0%
! AACTTTTGTACTCAGATTCT+AGG + Chr5:56913773-56913792 MsG0580027243.01.T01:CDS 30.0%
! AAGTTACTTTAACCTTGAAG+TGG + Chr5:56911198-56911217 MsG0580027243.01.T01:intron 30.0%
! AGAACCTACTTACATTTTGA+AGG + Chr5:56903889-56903908 MsG0580027243.01.T01:intron 30.0%
! ATAGTAAATGAACTCTGAGA+GGG - Chr5:56901545-56901564 None:intergenic 30.0%
! CGTTTTGTATTTTCCTTCTT+TGG - Chr5:56912320-56912339 None:intergenic 30.0%
! GGATTTATCGTATTGATCTA+AGG - Chr5:56902327-56902346 None:intergenic 30.0%
! GGTAATGAAATTTTTGCATC+GGG + Chr5:56904218-56904237 MsG0580027243.01.T01:intron 30.0%
! TATTAGGCTTCTTGAACTTT+TGG + Chr5:56913491-56913510 MsG0580027243.01.T01:CDS 30.0%
!! AAGAGGTTTTGATGTTAACA+AGG + Chr5:56901408-56901427 MsG0580027243.01.T01:CDS 30.0%
!! TATATTGGTTCCTTTACAAG+TGG - Chr5:56911172-56911191 None:intergenic 30.0%
!! TTACTTGCTGACTTAGTTAT+TGG + Chr5:56904537-56904556 MsG0580027243.01.T01:intron 30.0%
!! TTGATTTGTGTATCACTCTT+TGG + Chr5:56911910-56911929 MsG0580027243.01.T01:CDS 30.0%
!! TTTATCCTTTTAAGTGGAGA+AGG + Chr5:56911601-56911620 MsG0580027243.01.T01:CDS 30.0%
AAATCAAACCCATCCATGAA+TGG - Chr5:56911897-56911916 None:intergenic 35.0%
AAGTAAATCTCCGATATGCA+AGG - Chr5:56904523-56904542 None:intergenic 35.0%
AGCATTTCTTGTTCTCTTCT+GGG + Chr5:56911387-56911406 MsG0580027243.01.T01:intron 35.0%
AGTCGAGTTAATTAAGTCGA+GGG + Chr5:56904059-56904078 MsG0580027243.01.T01:intron 35.0%
ATACAATTCAAGTGGGAGAA+AGG + Chr5:56903659-56903678 MsG0580027243.01.T01:CDS 35.0%
ATACATCTTATGAGTTACGC+GGG - Chr5:56903916-56903935 None:intergenic 35.0%
ATCATTAGTTGCACAATGAC+CGG - Chr5:56901786-56901805 None:intergenic 35.0%
ATTATTATGGGTTCGAACCT+CGG + Chr5:56902842-56902861 MsG0580027243.01.T01:intron 35.0%
ATTTAGTTGCAAGGAGTTCA+AGG + Chr5:56901222-56901241 MsG0580027243.01.T01:CDS 35.0%
CACTTACCAAAACCATTTCA+TGG - Chr5:56901570-56901589 None:intergenic 35.0%
CATTTGGATGGGAAGATATT+AGG + Chr5:56901458-56901477 MsG0580027243.01.T01:CDS 35.0%
CCAAAAAGTTTGACAACAAG+AGG + Chr5:56912793-56912812 MsG0580027243.01.T01:intron 35.0%
CGTTGCAATCATCAAGTTTA+AGG - Chr5:56904912-56904931 None:intergenic 35.0%
CTAAGGAGAAATTCTACCAT+GGG - Chr5:56902310-56902329 None:intergenic 35.0%
GACCAAAAGACATTCTTTCA+TGG + Chr5:56902141-56902160 MsG0580027243.01.T01:intron 35.0%
GAGGTTCTATCACTATTACT+AGG - Chr5:56903112-56903131 None:intergenic 35.0%
GATAGTAAATGAACTCTGAG+AGG - Chr5:56901546-56901565 None:intergenic 35.0%
GATATGCAAGGTCATTGAAT+TGG - Chr5:56904511-56904530 None:intergenic 35.0%
GCCTAAAGAATTTACAACCA+TGG - Chr5:56913680-56913699 None:intergenic 35.0%
GCTAACAAAAATGTTGGAGA+TGG + Chr5:56904862-56904881 MsG0580027243.01.T01:intron 35.0%
GGAAAGTTATTCAAGTAGCA+TGG - Chr5:56902723-56902742 None:intergenic 35.0%
GTTAAAAACCTTGACCCAAA+AGG + Chr5:56904829-56904848 MsG0580027243.01.T01:intron 35.0%
GTTCAAATATTGCATTGCAG+TGG + Chr5:56913467-56913486 MsG0580027243.01.T01:intron 35.0%
TACTACCTTCTCCACTTAAA+AGG - Chr5:56911609-56911628 None:intergenic 35.0%
TAGCATTTCTTGTTCTCTTC+TGG + Chr5:56911386-56911405 MsG0580027243.01.T01:intron 35.0%
TATCTTGACACCTATTCATC+AGG + Chr5:56912071-56912090 MsG0580027243.01.T01:intron 35.0%
TCTAAGGAGAAATTCTACCA+TGG - Chr5:56902311-56902330 None:intergenic 35.0%
TGGGAAGATATTAGGTATGT+TGG + Chr5:56901466-56901485 MsG0580027243.01.T01:CDS 35.0%
TTAAAGTCTCACGTTGTAGA+TGG + Chr5:56901946-56901965 MsG0580027243.01.T01:intron 35.0%
TTAATAATGTGGAACTAGGC+CGG + Chr5:56901764-56901783 MsG0580027243.01.T01:intron 35.0%
TTACCTTGGCATGTATTTCT+TGG + Chr5:56913550-56913569 MsG0580027243.01.T01:CDS 35.0%
! AAGAGAGCATACAATTCAAG+TGG + Chr5:56903651-56903670 MsG0580027243.01.T01:CDS 35.0%
! AGAGAGCATACAATTCAAGT+GGG + Chr5:56903652-56903671 MsG0580027243.01.T01:CDS 35.0%
! CAGCTTTAGTTCAGTTGTTA+TGG + Chr5:56911303-56911322 MsG0580027243.01.T01:intron 35.0%
! CATTTTTGCTCTCACTCAAA+TGG - Chr5:56912848-56912867 None:intergenic 35.0%
! CTATCACCATGAAATGGTTT+TGG + Chr5:56901561-56901580 MsG0580027243.01.T01:CDS 35.0%
! GAATGTTTGTGCAGCAATTT+TGG + Chr5:56911729-56911748 MsG0580027243.01.T01:intron 35.0%
! GACCATGAAAGAATGTCTTT+TGG - Chr5:56902146-56902165 None:intergenic 35.0%
! GGTGTGTGTATATTTTCATG+AGG + Chr5:56904197-56904216 MsG0580027243.01.T01:intron 35.0%
! TAGCAACAACTTTCCCTTTT+GGG - Chr5:56904846-56904865 None:intergenic 35.0%
! TAGTAAATGAACTCTGAGAG+GGG - Chr5:56901544-56901563 None:intergenic 35.0%
! TTAGCAACAACTTTCCCTTT+TGG - Chr5:56904847-56904866 None:intergenic 35.0%
! TTGGGTCAAGGTTTTTAACA+AGG - Chr5:56904828-56904847 None:intergenic 35.0%
! TTTTGATGTTAACAAGGCTG+AGG + Chr5:56901414-56901433 MsG0580027243.01.T01:CDS 35.0%
!! AACTTTTTGGCAGTTTTTCC+TGG - Chr5:56912783-56912802 None:intergenic 35.0%
!! CCTCTTGTTGTCAAACTTTT+TGG - Chr5:56912796-56912815 None:intergenic 35.0%
!! CTTTAGCTTCTGGGATATTT+GGG + Chr5:56911818-56911837 MsG0580027243.01.T01:CDS 35.0%
!! GAAGAGAATTAGGAGTATTG+AGG - Chr5:56911435-56911454 None:intergenic 35.0%
!! TAGTATATTGCACCGACTAA+AGG + Chr5:56903247-56903266 MsG0580027243.01.T01:intron 35.0%
!! TGAGAGGTATTTGTGATTAG+AGG + Chr5:56904176-56904195 MsG0580027243.01.T01:intron 35.0%
!!! AAATGGTTTTGGTAAGTGAG+TGG + Chr5:56901572-56901591 MsG0580027243.01.T01:intron 35.0%
!!! TCTTTTTTTTTTTGTGGCCG+AGG - Chr5:56902862-56902881 None:intergenic 35.0%
AAATGCGAACAGTGAGGATA+AGG + Chr5:56913524-56913543 MsG0580027243.01.T01:CDS 40.0%
AACAAGCTAAATTGGACAGC+AGG - Chr5:56912266-56912285 None:intergenic 40.0%
AACACAATTGTAGGCATGCA+TGG + Chr5:56903545-56903564 MsG0580027243.01.T01:CDS 40.0%
AATTGTAGGCATGCATGGAA+AGG + Chr5:56903550-56903569 MsG0580027243.01.T01:CDS 40.0%
ACCCTTAACGAGGATGAAAA+AGG + Chr5:56904327-56904346 MsG0580027243.01.T01:intron 40.0%
ACTCTTGCAAGAAAGAGCAA+AGG - Chr5:56911352-56911371 None:intergenic 40.0%
AGAACTCCGGAGATTTATAG+AGG - Chr5:56904357-56904376 None:intergenic 40.0%
AGAGAATTCTGACCCAAAGA+AGG + Chr5:56912304-56912323 MsG0580027243.01.T01:intron 40.0%
AGTGACAGAAAGGATGATTG+AGG + Chr5:56903027-56903046 MsG0580027243.01.T01:CDS 40.0%
AGTTCATGATCACATGTGAG+AGG + Chr5:56904160-56904179 MsG0580027243.01.T01:intron 40.0%
ATACCTTATCTCAGCTTCCT+TGG - Chr5:56903179-56903198 None:intergenic 40.0%
ATGCTTTGCTTCATGGTAGA+AGG + Chr5:56903705-56903724 MsG0580027243.01.T01:CDS 40.0%
ATGGTGTCTGTGTTTATGTC+TGG + Chr5:56903361-56903380 MsG0580027243.01.T01:intron 40.0%
ATTACAACGATAAGCTAGGG+AGG - Chr5:56904759-56904778 None:intergenic 40.0%
ATTACTTGGTTGTAGCAACC+AGG - Chr5:56903754-56903773 None:intergenic 40.0%
ATTGCATTGCAGTGGCTATT+AGG + Chr5:56913475-56913494 MsG0580027243.01.T01:intron 40.0%
ATTGTCTTTAGCCCACCATT+TGG - Chr5:56903464-56903483 None:intergenic 40.0%
ATTTCTACAGCCTCCATTCA+TGG + Chr5:56911881-56911900 MsG0580027243.01.T01:CDS 40.0%
CCAAAATAACAAAGCCACTG+AGG - Chr5:56913717-56913736 None:intergenic 40.0%
CCACAATCCCATCATTTACT+TGG - Chr5:56911858-56911877 None:intergenic 40.0%
CCCTTAACGAGGATGAAAAA+GGG + Chr5:56904328-56904347 MsG0580027243.01.T01:intron 40.0%
CCTTAACGAGGATGAAAAAG+GGG + Chr5:56904329-56904348 MsG0580027243.01.T01:intron 40.0%
CCTTGAAGTGGAAGAAAAAG+TGG + Chr5:56911210-56911229 MsG0580027243.01.T01:intron 40.0%
CGGTGCATTTATGTCTTCAA+GGG + Chr5:56911791-56911810 MsG0580027243.01.T01:CDS 40.0%
CTCTTGCAAGAAAGAGCAAA+GGG - Chr5:56911351-56911370 None:intergenic 40.0%
CTCTTTCTTGCAAGAGTTTG+TGG + Chr5:56911355-56911374 MsG0580027243.01.T01:intron 40.0%
CTGCCAATGCATAAGTGTAT+AGG - Chr5:56913576-56913595 None:intergenic 40.0%
GAAGAAAAGGGAGAAGAATG+TGG + Chr5:56903519-56903538 MsG0580027243.01.T01:CDS 40.0%
GAGTCGAGTTAATTAAGTCG+AGG + Chr5:56904058-56904077 MsG0580027243.01.T01:intron 40.0%
GAGTTAATTAAGTCGAGGGT+CGG + Chr5:56904063-56904082 MsG0580027243.01.T01:intron 40.0%
GGATGGAGAAACAATTCCAT+TGG + Chr5:56901273-56901292 MsG0580027243.01.T01:CDS 40.0%
GGGACCTTCAAAATGTAAGT+AGG - Chr5:56903896-56903915 None:intergenic 40.0%
GGTGCATTTATGTCTTCAAG+GGG + Chr5:56911792-56911811 MsG0580027243.01.T01:CDS 40.0%
GTGAAAGAGATGGAAGAGAA+GGG + Chr5:56903064-56903083 MsG0580027243.01.T01:CDS 40.0%
GTGTGAAGGAGAGAAAATAG+TGG + Chr5:56901252-56901271 MsG0580027243.01.T01:CDS 40.0%
GTTAAAGGAGAAGAGAACTC+CGG - Chr5:56904370-56904389 None:intergenic 40.0%
TAAATATGTGTACGAGGTGC+TGG - Chr5:56901493-56901512 None:intergenic 40.0%
TACCTTATCTCAGCTTCCTT+GGG - Chr5:56903178-56903197 None:intergenic 40.0%
TATTACAGGGCAAAAGCTCT+AGG + Chr5:56903419-56903438 MsG0580027243.01.T01:intron 40.0%
TCCTAATTCTCTTCCTCAAC+AGG + Chr5:56911441-56911460 MsG0580027243.01.T01:intron 40.0%
TCCTGTTGAGGAAGAGAATT+AGG - Chr5:56911445-56911464 None:intergenic 40.0%
TCGGTGCATTTATGTCTTCA+AGG + Chr5:56911790-56911809 MsG0580027243.01.T01:CDS 40.0%
TGAAAGAGATGGAAGAGAAG+GGG + Chr5:56903065-56903084 MsG0580027243.01.T01:CDS 40.0%
TGAGCTCATACATGTGATGT+TGG - Chr5:56902376-56902395 None:intergenic 40.0%
TGAGGATAAGGATCTTACCT+TGG + Chr5:56913536-56913555 MsG0580027243.01.T01:CDS 40.0%
TGAGGCAAACAAGAGTGATT+TGG + Chr5:56901309-56901328 MsG0580027243.01.T01:CDS 40.0%
TGGCCTATACACTTATGCAT+TGG + Chr5:56913570-56913589 MsG0580027243.01.T01:CDS 40.0%
TGTCATGCCATGTGTACATT+TGG + Chr5:56902556-56902575 MsG0580027243.01.T01:intron 40.0%
TTACAACGATAAGCTAGGGA+GGG - Chr5:56904758-56904777 None:intergenic 40.0%
TTCCAGCACATGTAGTGAAA+AGG + Chr5:56903609-56903628 MsG0580027243.01.T01:CDS 40.0%
! AACAGTGCTGTTCTTCTAAG+AGG + Chr5:56901391-56901410 MsG0580027243.01.T01:CDS 40.0%
! ACGTTTTCTTCTATGACGAG+AGG + Chr5:56904300-56904319 MsG0580027243.01.T01:intron 40.0%
! AGTAAATGAACTCTGAGAGG+GGG - Chr5:56901543-56901562 None:intergenic 40.0%
! ATGGTATGGACTGCTAATGA+AGG + Chr5:56901517-56901536 MsG0580027243.01.T01:CDS 40.0%
! CCAAGTAAATGATGGGATTG+TGG + Chr5:56911855-56911874 MsG0580027243.01.T01:CDS 40.0%
! GAAGGAGAGAAAATAGTGGA+TGG + Chr5:56901256-56901275 MsG0580027243.01.T01:CDS 40.0%
! GATTTGGAGTCTTTGCTCTT+AGG + Chr5:56901325-56901344 MsG0580027243.01.T01:CDS 40.0%
! TCTGAAGCTTGGAACAAAAG+GGG - Chr5:56903008-56903027 None:intergenic 40.0%
! TTATGCATTGGCAGTAGCAA+CGG + Chr5:56913582-56913601 MsG0580027243.01.T01:CDS 40.0%
!! ACTCTGAAGCTTGGAACAAA+AGG - Chr5:56903010-56903029 None:intergenic 40.0%
!! CAGCAATTTTGGTGCATAGA+TGG + Chr5:56911740-56911759 MsG0580027243.01.T01:intron 40.0%
!! CCCTTTTTCATCCTCGTTAA+GGG - Chr5:56904331-56904350 None:intergenic 40.0%
!! CTCTGAAGCTTGGAACAAAA+GGG - Chr5:56903009-56903028 None:intergenic 40.0%
!! CTTCTGGGATATTTGGGATT+TGG + Chr5:56911824-56911843 MsG0580027243.01.T01:CDS 40.0%
!! GCTTTAGCTTCTGGGATATT+TGG + Chr5:56911817-56911836 MsG0580027243.01.T01:CDS 40.0%
!!! CCACTTTTTCTTCCACTTCA+AGG - Chr5:56911213-56911232 None:intergenic 40.0%
!!! CCTCAGTGGCTTTGTTATTT+TGG + Chr5:56913714-56913733 MsG0580027243.01.T01:CDS 40.0%
AAACCAATGACCATGAGCAC+AGG - Chr5:56911583-56911602 None:intergenic 45.0%
AAAGAGCAAAGGGAGTAGTG+AGG - Chr5:56911341-56911360 None:intergenic 45.0%
AAGAGCAAAGGGAGTAGTGA+GGG - Chr5:56911340-56911359 None:intergenic 45.0%
ACCCTTAGCGAGGATGAAAA+AGG + Chr5:56906281-56906300 MsG0580027243.01.T01:intron 45.0%
AGAAGTCGGTCCACTTGTAA+AGG + Chr5:56911159-56911178 MsG0580027243.01.T01:intron 45.0%
AGGCCAAGAAATACATGCCA+AGG - Chr5:56913556-56913575 None:intergenic 45.0%
AGTGATAGAACCTCCATGAG+AGG + Chr5:56903118-56903137 MsG0580027243.01.T01:CDS 45.0%
AGTTGCAAGGAGTTCAAGGT+GGG + Chr5:56901226-56901245 MsG0580027243.01.T01:CDS 45.0%
ATAGATGGTTACCAGGGTCA+AGG + Chr5:56911755-56911774 MsG0580027243.01.T01:CDS 45.0%
ATCCCAAGGAAGCTGAGATA+AGG + Chr5:56903173-56903192 MsG0580027243.01.T01:CDS 45.0%
ATTGGTACTACAACCTCGTG+AGG + Chr5:56901291-56901310 MsG0580027243.01.T01:CDS 45.0%
CAACATTTAGTGGAAGCGAG+TGG + Chr5:56904272-56904291 MsG0580027243.01.T01:intron 45.0%
CAAGCTTCAGAGTGACAGAA+AGG + Chr5:56903017-56903036 MsG0580027243.01.T01:CDS 45.0%
CCATCTCTTTCACCTCTTCT+GGG - Chr5:56903057-56903076 None:intergenic 45.0%
CCCTTAGCGAGGATGAAAAA+GGG + Chr5:56906282-56906301 MsG0580027243.01.T01:intron 45.0%
CCTTAGCGAGGATGAAAAAG+GGG + Chr5:56906283-56906302 MsG0580027243.01.T01:intron 45.0%
GAGAGGATATACCCTTAACG+AGG + Chr5:56904317-56904336 MsG0580027243.01.T01:intron 45.0%
GATGTAGAGTGGCTTCCAAA+TGG + Chr5:56903446-56903465 MsG0580027243.01.T01:CDS 45.0%
GCACATGTAGTGAAAAGGTG+TGG + Chr5:56903614-56903633 MsG0580027243.01.T01:CDS 45.0%
GCATAGATGAGATCCTGTTG+AGG - Chr5:56911457-56911476 None:intergenic 45.0%
GCATTTATGTCTTCAAGGGG+TGG + Chr5:56911795-56911814 MsG0580027243.01.T01:CDS 45.0%
GGATCTAAGAGCCAAGTTGT+CGG + Chr5:56911231-56911250 MsG0580027243.01.T01:intron 45.0%
GGGGAACCTCTATAAATCTC+CGG + Chr5:56904348-56904367 MsG0580027243.01.T01:intron 45.0%
GGTGAAAGAGATGGAAGAGA+AGG + Chr5:56903063-56903082 MsG0580027243.01.T01:CDS 45.0%
GTCAAGGGGGTTGAAGAAAT+CGG + Chr5:56911771-56911790 MsG0580027243.01.T01:CDS 45.0%
GTCGGAGTTAAAGTGATGTG+CGG + Chr5:56904081-56904100 MsG0580027243.01.T01:intron 45.0%
TACAGCCTCCATTCATGGAT+GGG + Chr5:56911886-56911905 MsG0580027243.01.T01:CDS 45.0%
TAGAGTGGCTTCCAAATGGT+GGG + Chr5:56903450-56903469 MsG0580027243.01.T01:CDS 45.0%
TAGATGGTTACCAGGGTCAA+GGG + Chr5:56911756-56911775 MsG0580027243.01.T01:CDS 45.0%
TAGTTGCAAGGAGTTCAAGG+TGG + Chr5:56901225-56901244 MsG0580027243.01.T01:CDS 45.0%
TCAAACCCATCCATGAATGG+AGG - Chr5:56911894-56911913 None:intergenic 45.0%
TCACGAGGTTGTAGTACCAA+TGG - Chr5:56901292-56901311 None:intergenic 45.0%
TCACTGTTCGCATTTCTCCT+CGG - Chr5:56913519-56913538 None:intergenic 45.0%
TCAGACGCACTTCCTTTAGT+CGG - Chr5:56903262-56903281 None:intergenic 45.0%
TCCATCTCTTTCACCTCTTC+TGG - Chr5:56903058-56903077 None:intergenic 45.0%
TCTCATGATGCTCTCGATCA+CGG + Chr5:56902349-56902368 MsG0580027243.01.T01:intron 45.0%
TGAGTCACTTGACTAGTGAG+AGG + Chr5:56911275-56911294 MsG0580027243.01.T01:intron 45.0%
TGGTGCATAGATGGTTACCA+GGG + Chr5:56911749-56911768 MsG0580027243.01.T01:CDS 45.0%
TTGGTGCATAGATGGTTACC+AGG + Chr5:56911748-56911767 MsG0580027243.01.T01:CDS 45.0%
! CACCTTTTCACTACATGTGC+TGG - Chr5:56903614-56903633 None:intergenic 45.0%
! CTCTAGGAATGGATGTAGAG+TGG + Chr5:56903435-56903454 MsG0580027243.01.T01:CDS 45.0%
! TTCAAGGTGGGAAAGTGTGA+AGG + Chr5:56901238-56901257 MsG0580027243.01.T01:CDS 45.0%
! TTCTTGAACTTTTGGCACCG+AGG + Chr5:56913499-56913518 MsG0580027243.01.T01:CDS 45.0%
!! CAACTTTCCCTTTTGGGTCA+AGG - Chr5:56904840-56904859 None:intergenic 45.0%
!! CCCCTTTTTCATCCTCGTTA+AGG - Chr5:56904332-56904351 None:intergenic 45.0%
!! CCCTTTTTCATCCTCGCTAA+GGG - Chr5:56906285-56906304 None:intergenic 45.0%
!! CTTTCTGTCACTCTGAAGCT+TGG - Chr5:56903019-56903038 None:intergenic 45.0%
!! GATCGAGAGCATCATGAGAT+TGG - Chr5:56902348-56902367 None:intergenic 45.0%
!! GGTGGGCTAAAGACAATACT+TGG + Chr5:56903467-56903486 MsG0580027243.01.T01:CDS 45.0%
!! TGTATCACTCTTTGGAGCTC+AGG + Chr5:56911918-56911937 MsG0580027243.01.T01:CDS 45.0%
!!! TTTTGGAACCTCAGATCCCA+AGG + Chr5:56903159-56903178 MsG0580027243.01.T01:CDS 45.0%
!!! AAATATATTTTCATTTTATT+TGG - Chr5:56902744-56902763 None:intergenic 5.0%
!!! AAATTTTAAATTAAATTGAA+AGG - Chr5:56912686-56912705 None:intergenic 5.0%
!!! ATTTTTTTTTTTTACAAAAA+TGG + Chr5:56902902-56902921 MsG0580027243.01.T01:intron 5.0%
!!! TTTTTTTTTTTTACAAAAAT+GGG + Chr5:56902903-56902922 MsG0580027243.01.T01:intron 5.0%
AGAACCTCCATGAGAGGTAG+AGG + Chr5:56903124-56903143 MsG0580027243.01.T01:CDS 50.0%
AGATGGTTACCAGGGTCAAG+GGG + Chr5:56911757-56911776 MsG0580027243.01.T01:CDS 50.0%
CAATGACCATGAGCACAGGA+TGG - Chr5:56911579-56911598 None:intergenic 50.0%
CACTTGACTAGTGAGAGGCA+AGG + Chr5:56911280-56911299 MsG0580027243.01.T01:intron 50.0%
CATCCTGTGCTCATGGTCAT+TGG + Chr5:56911577-56911596 MsG0580027243.01.T01:CDS 50.0%
CATGGACTCAGTGCTGTGTT+TGG - Chr5:56913662-56913681 None:intergenic 50.0%
CCCAGAAGAGGTGAAAGAGA+TGG + Chr5:56903054-56903073 MsG0580027243.01.T01:CDS 50.0%
CGTTGTAGATGGAAGAGTCG+AGG + Chr5:56901957-56901976 MsG0580027243.01.T01:intron 50.0%
CTACAGCCTCCATTCATGGA+TGG + Chr5:56911885-56911904 MsG0580027243.01.T01:CDS 50.0%
CTCATGATGCTCTCGATCAC+GGG + Chr5:56902350-56902369 MsG0580027243.01.T01:intron 50.0%
CTCTGTTCCATCTGCCATTG+TGG - Chr5:56903588-56903607 None:intergenic 50.0%
GAACCTCCATGAGAGGTAGA+GGG + Chr5:56903125-56903144 MsG0580027243.01.T01:CDS 50.0%
GAGAGGATATACCCTTAGCG+AGG + Chr5:56906271-56906290 MsG0580027243.01.T01:intron 50.0%
GAGGAGAAATGCGAACAGTG+AGG + Chr5:56913518-56913537 MsG0580027243.01.T01:CDS 50.0%
GAGTAGTGAGGGAAAGACAG+TGG - Chr5:56911329-56911348 None:intergenic 50.0%
GATTGAGGAGTTCCCAGAAG+AGG + Chr5:56903042-56903061 MsG0580027243.01.T01:CDS 50.0%
GTAGAGTGGCTTCCAAATGG+TGG + Chr5:56903449-56903468 MsG0580027243.01.T01:CDS 50.0%
GTAGCAACCAGGACTCTTCT+GGG - Chr5:56903743-56903762 None:intergenic 50.0%
TGCGCGTCCAAATGTACACA+TGG - Chr5:56902566-56902585 None:intergenic 50.0%
TGTAGCAACCAGGACTCTTC+TGG - Chr5:56903744-56903763 None:intergenic 50.0%
TTAGGTCTTGCTCTCCTCAG+TGG + Chr5:56913700-56913719 MsG0580027243.01.T01:CDS 50.0%
TTTGGACGCGCACACTGTTA+CGG + Chr5:56902574-56902593 MsG0580027243.01.T01:intron 50.0%
! CAAACACAGCACTGAGTCCA+TGG + Chr5:56913660-56913679 MsG0580027243.01.T01:CDS 50.0%
! GGAGATTAGCTCAGCCACAA+TGG + Chr5:56903571-56903590 MsG0580027243.01.T01:CDS 50.0%
! TCACTCTTGTTTGCCTCACG+AGG - Chr5:56901307-56901326 None:intergenic 50.0%
!! AAGGGGTGGCTTTAGCTTCT+GGG + Chr5:56911809-56911828 MsG0580027243.01.T01:CDS 50.0%
!! ATCACTCTTTGGAGCTCAGG+TGG + Chr5:56911921-56911940 MsG0580027243.01.T01:intron 50.0%
!! CAGGGCAAAAGCTCTAGGAA+TGG + Chr5:56903424-56903443 MsG0580027243.01.T01:intron 50.0%
!! CCCCTTTTTCATCCTCGCTA+AGG - Chr5:56906286-56906305 None:intergenic 50.0%
!! TCACTCTTTGGAGCTCAGGT+GGG + Chr5:56911922-56911941 MsG0580027243.01.T01:intron 50.0%
AAAGGGGTCTCTCCTCCTTC+AGG - Chr5:56902992-56903011 None:intergenic 55.0%
AAGGGGTCTCTCCTCCTTCA+GGG - Chr5:56902991-56903010 None:intergenic 55.0%
ACGACTCCTCGTTGTGTCTG+GGG + Chr5:56904107-56904126 MsG0580027243.01.T01:intron 55.0%
AGCTCAGCCACAATGGCAGA+TGG + Chr5:56903578-56903597 MsG0580027243.01.T01:CDS 55.0%
AGGTATCCCCAGACACAACG+AGG - Chr5:56904116-56904135 None:intergenic 55.0%
CTCAGCTTCCTTGGGATCTG+AGG - Chr5:56903170-56903189 None:intergenic 55.0%
CTCCATGAGAGGTAGAGGGT+GGG + Chr5:56903129-56903148 MsG0580027243.01.T01:CDS 55.0%
GACGACTCCTCGTTGTGTCT+GGG + Chr5:56904106-56904125 MsG0580027243.01.T01:intron 55.0%
GATGGTTACCAGGGTCAAGG+GGG + Chr5:56911758-56911777 MsG0580027243.01.T01:CDS 55.0%
GCAGTAGCAACGGCTGAAAC+TGG + Chr5:56913592-56913611 MsG0580027243.01.T01:CDS 55.0%
GGTTCTCCATCCTGTGCTCA+TGG + Chr5:56911570-56911589 MsG0580027243.01.T01:intron 55.0%
TGTGAGATACCTCCCCCTGA+AGG + Chr5:56902974-56902993 MsG0580027243.01.T01:CDS 55.0%
TTCTTCAACCCCCTTGACCC+TGG - Chr5:56911769-56911788 None:intergenic 55.0%
TTGGACGCGCACACTGTTAC+GGG + Chr5:56902575-56902594 MsG0580027243.01.T01:intron 55.0%
! ACTCTTCTGGGAGGAAGGGA+AGG - Chr5:56903731-56903750 None:intergenic 55.0%
! AGAGGGTGGGAGGATGCTTT+TGG + Chr5:56903142-56903161 MsG0580027243.01.T01:CDS 55.0%
! CAGGACTCTTCTGGGAGGAA+GGG - Chr5:56903735-56903754 None:intergenic 55.0%
!! CAAGGGGTGGCTTTAGCTTC+TGG + Chr5:56911808-56911827 MsG0580027243.01.T01:CDS 55.0%
AGGGGTCTCTCCTCCTTCAG+GGG - Chr5:56902990-56903009 None:intergenic 60.0%
CAAGTTGTCGGCAGCACGAG+TGG + Chr5:56911243-56911262 MsG0580027243.01.T01:intron 60.0%
CACTCGTGCTGCCGACAACT+TGG - Chr5:56911245-56911264 None:intergenic 60.0%
CATGAGAGGTAGAGGGTGGG+AGG + Chr5:56903132-56903151 MsG0580027243.01.T01:CDS 60.0%
CCACCCTCTACCTCTCATGG+AGG - Chr5:56903131-56903150 None:intergenic 60.0%
CCTCCATGAGAGGTAGAGGG+TGG + Chr5:56903128-56903147 MsG0580027243.01.T01:CDS 60.0%
CCTTCCTCCCAGAAGAGTCC+TGG + Chr5:56903733-56903752 MsG0580027243.01.T01:CDS 60.0%
CGACGACTCCTCGTTGTGTC+TGG + Chr5:56904105-56904124 MsG0580027243.01.T01:intron 60.0%
CTCCCACCCTCTACCTCTCA+TGG - Chr5:56903134-56903153 None:intergenic 60.0%
GAGATACCTCCCCCTGAAGG+AGG + Chr5:56902977-56902996 MsG0580027243.01.T01:CDS 60.0%
GCAACCAGGACTCTTCTGGG+AGG - Chr5:56903740-56903759 None:intergenic 60.0%
! CCAGGACTCTTCTGGGAGGA+AGG - Chr5:56903736-56903755 None:intergenic 60.0%
GGGGTCTCTCCTCCTTCAGG+GGG - Chr5:56902989-56903008 None:intergenic 65.0%
GTCTCTCCTCCTTCAGGGGG+AGG - Chr5:56902986-56903005 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
Chr5 gene 56901217 56913810 56901217 ID=MsG0580027243.01;Name=MsG0580027243.01
Chr5 mRNA 56901217 56913810 56901217 ID=MsG0580027243.01.T01;Parent=MsG0580027243.01;Name=MsG0580027243.01.T01;_AED=0.26;_eAED=0.26;_QI=0|0|0|0.9|1|1|10|0|877
Chr5 exon 56901217 56901582 56901217 ID=MsG0580027243.01.T01:exon:12784;Parent=MsG0580027243.01.T01
Chr5 exon 56902941 56903194 56902941 ID=MsG0580027243.01.T01:exon:12785;Parent=MsG0580027243.01.T01
Chr5 exon 56903427 56903768 56903427 ID=MsG0580027243.01.T01:exon:12786;Parent=MsG0580027243.01.T01
Chr5 exon 56905381 56905722 56905381 ID=MsG0580027243.01.T01:exon:12787;Parent=MsG0580027243.01.T01
Chr5 exon 56907335 56907676 56907335 ID=MsG0580027243.01.T01:exon:12788;Parent=MsG0580027243.01.T01
Chr5 exon 56909289 56909581 56909289 ID=MsG0580027243.01.T01:exon:12789;Parent=MsG0580027243.01.T01
Chr5 exon 56910671 56910792 56910671 ID=MsG0580027243.01.T01:exon:12790;Parent=MsG0580027243.01.T01
Chr5 exon 56911571 56911622 56911571 ID=MsG0580027243.01.T01:exon:12791;Parent=MsG0580027243.01.T01
Chr5 exon 56911743 56911939 56911743 ID=MsG0580027243.01.T01:exon:12792;Parent=MsG0580027243.01.T01
Chr5 exon 56913487 56913810 56913487 ID=MsG0580027243.01.T01:exon:12793;Parent=MsG0580027243.01.T01
Chr5 CDS 56901217 56901582 56901217 ID=MsG0580027243.01.T01:cds;Parent=MsG0580027243.01.T01
Chr5 CDS 56902941 56903194 56902941 ID=MsG0580027243.01.T01:cds;Parent=MsG0580027243.01.T01
Chr5 CDS 56903427 56903768 56903427 ID=MsG0580027243.01.T01:cds;Parent=MsG0580027243.01.T01
Chr5 CDS 56905381 56905722 56905381 ID=MsG0580027243.01.T01:cds;Parent=MsG0580027243.01.T01
Chr5 CDS 56907335 56907676 56907335 ID=MsG0580027243.01.T01:cds;Parent=MsG0580027243.01.T01
Chr5 CDS 56909289 56909581 56909289 ID=MsG0580027243.01.T01:cds;Parent=MsG0580027243.01.T01
Chr5 CDS 56910671 56910792 56910671 ID=MsG0580027243.01.T01:cds;Parent=MsG0580027243.01.T01
Chr5 CDS 56911571 56911622 56911571 ID=MsG0580027243.01.T01:cds;Parent=MsG0580027243.01.T01
Chr5 CDS 56911743 56911939 56911743 ID=MsG0580027243.01.T01:cds;Parent=MsG0580027243.01.T01
Chr5 CDS 56913487 56913810 56913487 ID=MsG0580027243.01.T01:cds;Parent=MsG0580027243.01.T01
Gene Sequence

>MsG0580027243.01.T01

ATGGAATTTAGTTGCAAGGAGTTCAAGGTGGGAAAGTGTGAAGGAGAGAAAATAGTGGATGGAGAAACAATTCCATTGGTACTACAACCTCGTGAGGCAAACAAGAGTGATTTGGAGTCTTTGCTCTTAGGTTTGAATAAGAACAAAGAATGGTTTGAGGAAATGATTATAAAGAACAGTGCTGTTCTTCTAAGAGGTTTTGATGTTAACAAGGCTGAGGACTTTAATGATATTGTTGAAACATTTGGATGGGAAGATATTAGGTATGTTGGACCAGCACCTCGTACACATATTTACAAAATGGTATGGACTGCTAATGAAGGCCCCCTCTCAGAGTTCATTTACTATCACCATGAAATGGTTTTGATTAAGGAATATCCAAAAAAATTGATTCTATTCTGTGAGATACCTCCCCCTGAAGGAGGAGAGACCCCTTTTGTTCCAAGCTTCAGAGTGACAGAAAGGATGATTGAGGAGTTCCCAGAAGAGGTGAAAGAGATGGAAGAGAAGGGGTTGAAGTATTCTTTTTCAGCTCCTAGTAATAGTGATAGAACCTCCATGAGAGGTAGAGGGTGGGAGGATGCTTTTGGAACCTCAGATCCCAAGGAAGCTGAGATAAGGGCAAAAGCTCTAGGAATGGATGTAGAGTGGCTTCCAAATGGTGGGCTAAAGACAATACTTGGACCAAGAAATTTAACAAAAGTATTTGAAGGAAGAAAAGGGAGAAGAATGTGGTTTAACACAATTGTAGGCATGCATGGAAAGGAGATTAGCTCAGCCACAATGGCAGATGGAACAGAGATTCCAGCACATGTAGTGAAAAGGTGTGGAGAGATCATTGAAGAAGAGAGCATACAATTCAAGTGGGAGAAAGGAGATGTTCTTTTCTTAGATAATTATGCTTTGCTTCATGGTAGAAGGCCTTCCCTTCCTCCCAGAAGAGTCCTGGTTGCTACAACCAAGGCAAAAGCTCTAGGAATGGATGTAGAGTGGCTTCCAAATGGTGGGCTAAAGACAATACTTGGACCAAGAAATTTAACAAAAGTATTTGAAGGAAGAAAAGGGAGAAGAATGTGGTTTAACACAATTGTAGGCATGCATGGAAAGGAGATTAGCTCAGCCACAATGGCAGATGGAACAGAGATTCCAGCACATGTAGTGAAAAGGTGTGGAGAGATCATTGAAGAAGAGAGCATACAATTCAAGTGGGAGAAAGGAGATGTTCTTTTCTTAGATAATTATGCTTTGCTTCATGGTAGAAGGCCTTCCCTTCCTCCCAGAAGAGTCCTGGTTGCTACAACCAAGGCAAAAGCTCTAGGAATGGATGTAGAGTGGCTTCCAAATGGTGGGCTAAAGACAATACTTGGACCAAGAAATTTAACAAAAGTATTTGAAGGAAGAAAAGGGAGAAGAATGTGGTTTAACACAATTGTAGGCATGCATGGAAAGGAGATTAGCTCAGCCACAATGGCAGATGGAACAGAGATTCCAGCACATGTAGTGAAAAGGTGTGGAGAGATCATTGAAGAAGAGAGCATACAATTCAAGTGGGAGAAAGGAGATGTTCTTTTCTTAGATAATTATGCTTTGCTTCATGGTAGAAGGCCTTCCCTTCCTCCCAGAAGAGTCCTGGTTGCTACAACCAAGGCAAAAGCTCTAGGAATGGATGTAGAGTGGCTTCCAAATGGTGGGCTAAAGACAATACTTGGACCAAGAAATTTAACAAAAGTATTTGAAGGAAGAAAAGGGAGAAGAATGTGGTTTAACACAATTGTAGGCATGCATGGAAAGGAGATTAGCTCAGCCACAATGGCAGATGGAACAGAGATTCCAGCACATGTAGTGAAAAGGTGTGGAGAGATCATTGAAGAAGAGAGCATACAATTCAAGTGGGAGAAAGGAGATGTTCTTTTCTTAGATAATTATGCTTTGCTTCATGGATATGATGATTTGTACCTTGTTAAAAACCTTGACCCAAAAGGGAAAGTTGTTGCTAACAAAAATGTTGGAGATGGAGTCAAGATTAAAAAAGAAGAAAGCCTTAAACTTGATGATTGCAACGTTCTCCATCCTGTGCTCATGGTCATTGGTTTTATCCTTTTAAGTGGAGAAGCAATTTTGGTGCATAGATGGTTACCAGGGTCAAGGGGGTTGAAGAAATCGGTGCATTTATGTCTTCAAGGGGTGGCTTTAGCTTCTGGGATATTTGGGATTTGGACAAAATTCCAAGTAAATGATGGGATTGTGGCTAATTTCTACAGCCTCCATTCATGGATGGGTTTGATTTGTGTATCACTCTTTGGAGCTCAGTGGCTATTAGGCTTCTTGAACTTTTGGCACCGAGGAGAAATGCGAACAGTGAGGATAAGGATCTTACCTTGGCATGTATTTCTTGGCCTATACACTTATGCATTGGCAGTAGCAACGGCTGAAACTGGATTATTAGAGAAGTTGACATTCTTGCAAACACAGAGAAATGTATCCAAACACAGCACTGAGTCCATGGTTGTAAATTCTTTAGGCTTAGGTCTTGCTCTCCTCAGTGGCTTTGTTATTTTGGCTGCTGTTTCGCCTAAGTATCAAATTCTTCAAAGCAAACTTTTGTACTCAGATTCTAGGTGTTTGTCATCTTAA
Protein sequence

>MsG0580027243.01.T01

MEFSCKEFKVGKCEGEKIVDGETIPLVLQPREANKSDLESLLLGLNKNKEWFEEMIIKNSAVLLRGFDVNKAEDFNDIVETFGWEDIRYVGPAPRTHIYKMVWTANEGPLSEFIYYHHEMVLIKEYPKKLILFCEIPPPEGGETPFVPSFRVTERMIEEFPEEVKEMEEKGLKYSFSAPSNSDRTSMRGRGWEDAFGTSDPKEAEIRAKALGMDVEWLPNGGLKTILGPRNLTKVFEGRKGRRMWFNTIVGMHGKEISSATMADGTEIPAHVVKRCGEIIEEESIQFKWEKGDVLFLDNYALLHGRRPSLPPRRVLVATTKAKALGMDVEWLPNGGLKTILGPRNLTKVFEGRKGRRMWFNTIVGMHGKEISSATMADGTEIPAHVVKRCGEIIEEESIQFKWEKGDVLFLDNYALLHGRRPSLPPRRVLVATTKAKALGMDVEWLPNGGLKTILGPRNLTKVFEGRKGRRMWFNTIVGMHGKEISSATMADGTEIPAHVVKRCGEIIEEESIQFKWEKGDVLFLDNYALLHGRRPSLPPRRVLVATTKAKALGMDVEWLPNGGLKTILGPRNLTKVFEGRKGRRMWFNTIVGMHGKEISSATMADGTEIPAHVVKRCGEIIEEESIQFKWEKGDVLFLDNYALLHGYDDLYLVKNLDPKGKVVANKNVGDGVKIKKEESLKLDDCNVLHPVLMVIGFILLSGEAILVHRWLPGSRGLKKSVHLCLQGVALASGIFGIWTKFQVNDGIVANFYSLHSWMGLICVSLFGAQWLLGFLNFWHRGEMRTVRIRILPWHVFLGLYTYALAVATAETGLLEKLTFLQTQRNVSKHSTESMVVNSLGLGLALLSGFVILAAVSPKYQILQSKLLYSDSRCLSS*