Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045761.01.T03 | XP_003629499.1 | 99.127 | 229 | 2 | 0 | 1 | 229 | 85 | 313 | 1.72E-162 | 461 |
| MsG0880045761.01.T01 | PNY02187.1 | 72.477 | 218 | 40 | 5 | 1 | 214 | 1 | 202 | 1.52E-82 | 254 |
| MsG0880045761.01.T02 | XP_003629499.1 | 98.722 | 313 | 4 | 0 | 1 | 313 | 1 | 313 | 0 | 621 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045761.01.T01 | Q9SYY4 | 60.345 | 116 | 44 | 1 | 13 | 126 | 6 | 121 | 6.10E-41 | 144 |
| MsG0880045761.01.T02 | Q9SYY4 | 60 | 285 | 106 | 4 | 13 | 294 | 6 | 285 | 2.27E-117 | 342 |
| MsG0880045761.01.T03 | Q9SYY4 | 61.972 | 213 | 73 | 4 | 1 | 210 | 78 | 285 | 1.18E-88 | 266 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045761.01.T01 | A0A2K3NGN0 | 72.477 | 218 | 40 | 5 | 1 | 214 | 1 | 202 | 7.27e-83 | 254 |
| MsG0880045761.01.T02 | G7LFI8 | 98.722 | 313 | 4 | 0 | 1 | 313 | 1 | 313 | 0.0 | 621 |
| MsG0880045761.01.T03 | G7LFI8 | 99.127 | 229 | 2 | 0 | 1 | 229 | 85 | 313 | 8.19e-163 | 461 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048992.01 | MsG0880045761.01 | 0.826783 | 2.244470e-54 | 2.125666e-51 |
| MsG0080049023.01 | MsG0880045761.01 | 0.825515 | 4.494502e-54 | 4.105551e-51 |
| MsG0180000096.01 | MsG0880045761.01 | -0.822686 | 2.073897e-53 | 1.748209e-50 |
| MsG0180000466.01 | MsG0880045761.01 | -0.867066 | 1.798817e-65 | 6.197786e-62 |
| MsG0180000490.01 | MsG0880045761.01 | 0.814827 | 1.263615e-51 | 8.567945e-49 |
| MsG0180000719.01 | MsG0880045761.01 | 0.806653 | 7.410519e-50 | 4.044076e-47 |
| MsG0180001169.01 | MsG0880045761.01 | -0.830090 | 3.571465e-55 | 3.724907e-52 |
| MsG0180001523.01 | MsG0880045761.01 | 0.807570 | 4.738096e-50 | 2.648019e-47 |
| MsG0180001615.01 | MsG0880045761.01 | 0.854838 | 9.429359e-62 | 2.134033e-58 |
| MsG0180002404.01 | MsG0880045761.01 | -0.815395 | 9.451887e-52 | 6.508856e-49 |
| MsG0880044204.01 | MsG0880045761.01 | -0.807766 | 4.306121e-50 | 2.418959e-47 |
| MsG0880044317.01 | MsG0880045761.01 | 0.831140 | 1.975554e-55 | 2.124929e-52 |
| MsG0880044318.01 | MsG0880045761.01 | 0.829949 | 3.865863e-55 | 4.015806e-52 |
| MsG0880044453.01 | MsG0880045761.01 | 0.850376 | 1.767298e-60 | 3.454797e-57 |
| MsG0880044548.01 | MsG0880045761.01 | 0.823981 | 1.033476e-53 | 9.036141e-51 |
| MsG0880045356.01 | MsG0880045761.01 | -0.821577 | 3.750029e-53 | 3.062634e-50 |
| MsG0880045394.01 | MsG0880045761.01 | 0.824844 | 6.474590e-54 | 5.802755e-51 |
| MsG0880045400.01 | MsG0880045761.01 | 0.819110 | 1.379681e-52 | 1.052086e-49 |
| MsG0880045725.01 | MsG0880045761.01 | -0.823295 | 1.495960e-53 | 1.282861e-50 |
| MsG0880045761.01 | MsG0880045991.01 | -0.818682 | 1.725997e-52 | 1.300645e-49 |
| MsG0880045761.01 | MsG0880046010.01 | 0.835604 | 1.523397e-56 | 1.872116e-53 |
| MsG0880045761.01 | MsG0880046160.01 | 0.819955 | 8.850072e-53 | 6.909499e-50 |
| MsG0880045761.01 | MsG0880047090.01 | -0.835260 | 1.861573e-56 | 2.264457e-53 |
| MsG0880045761.01 | MsG0880047207.01 | 0.803753 | 2.999159e-49 | 1.519414e-46 |
| MsG0880045761.01 | MsG0880047660.01 | 0.814300 | 1.652702e-51 | 1.104872e-48 |
| MsG0180002891.01 | MsG0880045761.01 | 0.817211 | 3.709461e-52 | 2.684670e-49 |
| MsG0180003405.01 | MsG0880045761.01 | 0.814798 | 1.282270e-51 | 8.687816e-49 |
| MsG0180003503.01 | MsG0880045761.01 | 0.806360 | 8.543241e-50 | 4.627686e-47 |
| MsG0180003617.01 | MsG0880045761.01 | 0.804633 | 1.966785e-49 | 1.019172e-46 |
| MsG0180003905.01 | MsG0880045761.01 | -0.811965 | 5.377260e-51 | 3.375382e-48 |
| MsG0180004064.01 | MsG0880045761.01 | -0.859160 | 5.011141e-63 | 1.310813e-59 |
| MsG0180004787.01 | MsG0880045761.01 | 0.809615 | 1.733543e-50 | 1.022709e-47 |
| MsG0180004828.01 | MsG0880045761.01 | -0.820628 | 6.204376e-53 | 4.934626e-50 |
| MsG0180005338.01 | MsG0880045761.01 | 0.871587 | 6.099104e-67 | 2.473890e-63 |
| MsG0180005681.01 | MsG0880045761.01 | -0.800527 | 1.382399e-48 | 6.451220e-46 |
| MsG0180005767.01 | MsG0880045761.01 | 0.823307 | 1.486546e-53 | 1.275179e-50 |
| MsG0180006063.01 | MsG0880045761.01 | 0.812684 | 3.744947e-51 | 2.396648e-48 |
| MsG0180006076.01 | MsG0880045761.01 | 0.811074 | 8.399018e-51 | 5.149346e-48 |
| MsG0180006183.01 | MsG0880045761.01 | -0.810480 | 1.128685e-50 | 6.811171e-48 |
| MsG0280006301.01 | MsG0880045761.01 | -0.816536 | 5.256374e-52 | 3.734571e-49 |
| MsG0780040660.01 | MsG0880045761.01 | -0.832591 | 8.663724e-56 | 9.727728e-53 |
| MsG0780040978.01 | MsG0880045761.01 | -0.819655 | 1.036231e-52 | 8.022710e-50 |
| MsG0780041002.01 | MsG0880045761.01 | 0.821678 | 3.554491e-53 | 2.911301e-50 |
| MsG0780041129.01 | MsG0880045761.01 | 0.814368 | 1.596805e-51 | 1.069409e-48 |
| MsG0780041240.01 | MsG0880045761.01 | -0.823943 | 1.055141e-53 | 9.216005e-51 |
| MsG0780041436.01 | MsG0880045761.01 | -0.811342 | 7.346000e-51 | 4.535381e-48 |
| MsG0780041560.01 | MsG0880045761.01 | -0.812421 | 4.276965e-51 | 2.718258e-48 |
| MsG0880043495.01 | MsG0880045761.01 | -0.849803 | 2.557350e-60 | 4.905883e-57 |
| MsG0880043515.01 | MsG0880045761.01 | 0.810861 | 9.336648e-51 | 5.692221e-48 |
| MsG0280010584.01 | MsG0880045761.01 | 0.817037 | 4.058672e-52 | 2.923496e-49 |
| MsG0280010696.01 | MsG0880045761.01 | 0.800250 | 1.573994e-48 | 7.294031e-46 |
| MsG0280011036.01 | MsG0880045761.01 | 0.854431 | 1.236644e-61 | 2.761126e-58 |
| MsG0280011169.01 | MsG0880045761.01 | 0.817624 | 2.993859e-52 | 2.191390e-49 |
| MsG0280011207.01 | MsG0880045761.01 | 0.827527 | 1.489590e-54 | 1.441706e-51 |
| MsG0280011281.01 | MsG0880045761.01 | 0.817765 | 2.782730e-52 | 2.044845e-49 |
| MsG0380012931.01 | MsG0880045761.01 | 0.841011 | 6.151929e-58 | 8.919756e-55 |
| MsG0680032003.01 | MsG0880045761.01 | 0.800123 | 1.670609e-48 | 7.716814e-46 |
| MsG0680032512.01 | MsG0880045761.01 | 0.827659 | 1.384346e-54 | 1.345006e-51 |
| MsG0680035612.01 | MsG0880045761.01 | 0.800600 | 1.335769e-48 | 6.245318e-46 |
| MsG0480018486.01 | MsG0880045761.01 | -0.816473 | 5.432366e-52 | 3.852801e-49 |
| MsG0480019171.01 | MsG0880045761.01 | -0.809847 | 1.545650e-50 | 9.173876e-48 |
| MsG0480020797.01 | MsG0880045761.01 | -0.836137 | 1.115825e-56 | 1.393572e-53 |
| MsG0480021151.01 | MsG0880045761.01 | 0.851680 | 7.581336e-61 | 1.546457e-57 |
| MsG0480021892.01 | MsG0880045761.01 | 0.808492 | 3.015846e-50 | 1.726857e-47 |
| MsG0480021895.01 | MsG0880045761.01 | 0.800281 | 1.551010e-48 | 7.193423e-46 |
| MsG0480022002.01 | MsG0880045761.01 | 0.827103 | 1.882349e-54 | 1.799459e-51 |
| MsG0480022241.01 | MsG0880045761.01 | 0.811771 | 5.927096e-51 | 3.701264e-48 |
| MsG0480022302.01 | MsG0880045761.01 | -0.823205 | 1.570365e-53 | 1.343246e-50 |
| MsG0480022968.01 | MsG0880045761.01 | -0.821795 | 3.339534e-53 | 2.744446e-50 |
| MsG0480023375.01 | MsG0880045761.01 | 0.854493 | 1.186848e-61 | 2.655349e-58 |
| MsG0480023386.01 | MsG0880045761.01 | 0.850956 | 1.213959e-60 | 2.418786e-57 |
| MsG0480023414.01 | MsG0880045761.01 | -0.800143 | 1.654644e-48 | 7.647091e-46 |
| MsG0480023528.01 | MsG0880045761.01 | -0.823216 | 1.560826e-53 | 1.335504e-50 |
| MsG0480023577.01 | MsG0880045761.01 | 0.804183 | 2.440794e-49 | 1.250243e-46 |
| MsG0480023663.01 | MsG0880045761.01 | -0.800919 | 1.149884e-48 | 5.420108e-46 |
| MsG0580024201.01 | MsG0880045761.01 | 0.809961 | 1.460310e-50 | 8.693664e-48 |
| MsG0580024538.01 | MsG0880045761.01 | 0.820125 | 8.089983e-53 | 6.346666e-50 |
| MsG0580024768.01 | MsG0880045761.01 | 0.811433 | 7.018779e-51 | 4.344195e-48 |
| MsG0580025633.01 | MsG0880045761.01 | -0.800815 | 1.207114e-48 | 5.674563e-46 |
| MsG0580026029.01 | MsG0880045761.01 | -0.812230 | 4.706087e-51 | 2.975631e-48 |
| MsG0380015402.01 | MsG0880045761.01 | -0.821682 | 3.546067e-53 | 2.904797e-50 |
| MsG0380015446.01 | MsG0880045761.01 | -0.810739 | 9.925672e-51 | 6.031412e-48 |
| MsG0380015828.01 | MsG0880045761.01 | 0.846174 | 2.563081e-59 | 4.373830e-56 |
| MsG0380015857.01 | MsG0880045761.01 | -0.819904 | 9.089210e-53 | 7.086199e-50 |
| MsG0380016031.01 | MsG0880045761.01 | -0.831430 | 1.676711e-55 | 1.819023e-52 |
| MsG0380016065.01 | MsG0880045761.01 | 0.817221 | 3.690196e-52 | 2.671421e-49 |
| MsG0380016066.01 | MsG0880045761.01 | 0.843234 | 1.587913e-58 | 2.468449e-55 |
| MsG0380016151.01 | MsG0880045761.01 | 0.822103 | 2.833226e-53 | 2.348723e-50 |
| MsG0380016250.01 | MsG0880045761.01 | -0.807033 | 6.158435e-50 | 3.394246e-47 |
| MsG0380016861.01 | MsG0880045761.01 | 0.818663 | 1.742855e-52 | 1.312648e-49 |
| MsG0380017156.01 | MsG0880045761.01 | -0.846973 | 1.551375e-59 | 2.716556e-56 |
| MsG0380017385.01 | MsG0880045761.01 | 0.842387 | 2.666930e-58 | 4.037537e-55 |
| MsG0380017588.01 | MsG0880045761.01 | -0.808744 | 2.663939e-50 | 1.535366e-47 |
| MsG0380017812.01 | MsG0880045761.01 | 0.803643 | 3.160395e-49 | 1.596563e-46 |
| MsG0380017826.01 | MsG0880045761.01 | -0.863396 | 2.565025e-64 | 7.764395e-61 |
| MsG0580026343.01 | MsG0880045761.01 | -0.810764 | 9.798853e-51 | 5.958488e-48 |
| MsG0580026446.01 | MsG0880045761.01 | -0.828841 | 7.182627e-55 | 7.222804e-52 |
| MsG0580027732.01 | MsG0880045761.01 | 0.817994 | 2.470718e-52 | 1.826947e-49 |
| MsG0580027854.01 | MsG0880045761.01 | -0.802802 | 4.719430e-49 | 2.333435e-46 |
| MsG0580028013.01 | MsG0880045761.01 | 0.836894 | 7.161888e-57 | 9.150371e-54 |
| MsG0580028041.01 | MsG0880045761.01 | -0.835144 | 1.990276e-56 | 2.412325e-53 |
| MsG0580028159.01 | MsG0880045761.01 | 0.825258 | 5.171820e-54 | 4.689985e-51 |
| MsG0580028397.01 | MsG0880045761.01 | 0.835118 | 2.021559e-56 | 2.448230e-53 |
| MsG0580028398.01 | MsG0880045761.01 | 0.849626 | 2.866348e-60 | 5.467192e-57 |
| MsG0580028403.01 | MsG0880045761.01 | 0.835906 | 1.277600e-56 | 1.584374e-53 |
| MsG0580029157.01 | MsG0880045761.01 | -0.815580 | 8.596258e-52 | 5.949790e-49 |
| MsG0580029218.01 | MsG0880045761.01 | -0.817699 | 2.879230e-52 | 2.111872e-49 |
| MsG0580030141.01 | MsG0880045761.01 | -0.801206 | 1.004613e-48 | 4.769583e-46 |
| MsG0680030296.01 | MsG0880045761.01 | -0.813126 | 2.997098e-51 | 1.940544e-48 |
| MsG0680030644.01 | MsG0880045761.01 | 0.803351 | 3.633122e-49 | 1.821578e-46 |
| MsG0280006534.01 | MsG0880045761.01 | 0.814961 | 1.180084e-51 | 8.030668e-49 |
| MsG0280006787.01 | MsG0880045761.01 | 0.811740 | 6.019393e-51 | 3.755846e-48 |
| MsG0280007084.01 | MsG0880045761.01 | -0.826783 | 2.244791e-54 | 2.125959e-51 |
| MsG0280007504.01 | MsG0880045761.01 | -0.822734 | 2.022070e-53 | 1.706845e-50 |
| MsG0280007505.01 | MsG0880045761.01 | -0.805953 | 1.040877e-49 | 5.580181e-47 |
| MsG0280007653.01 | MsG0880045761.01 | 0.826520 | 2.593240e-54 | 2.437584e-51 |
| MsG0280010253.01 | MsG0880045761.01 | 0.802354 | 5.838682e-49 | 2.854077e-46 |
| MsG0280010455.01 | MsG0880045761.01 | 0.832810 | 7.642970e-56 | 8.637651e-53 |
| MsG0680035665.01 | MsG0880045761.01 | 0.807426 | 5.085533e-50 | 2.831677e-47 |
| MsG0780036060.01 | MsG0880045761.01 | -0.835664 | 1.471198e-56 | 1.811230e-53 |
| MsG0780036859.01 | MsG0880045761.01 | -0.800182 | 1.624664e-48 | 7.515850e-46 |
| MsG0780036984.01 | MsG0880045761.01 | -0.801052 | 1.079951e-48 | 5.107793e-46 |
| MsG0780037458.01 | MsG0880045761.01 | 0.818828 | 1.598832e-52 | 1.209745e-49 |
| MsG0780037999.01 | MsG0880045761.01 | -0.815739 | 7.921645e-52 | 5.507272e-49 |
| MsG0780038919.01 | MsG0880045761.01 | -0.819621 | 1.055040e-52 | 8.159965e-50 |
| MsG0780039401.01 | MsG0880045761.01 | 0.800036 | 1.740226e-48 | 8.020506e-46 |
| MsG0780040154.01 | MsG0880045761.01 | 0.829363 | 5.367145e-55 | 5.481730e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045761.01.T03 | MTR_8g078200 | 99.127 | 229 | 2 | 0 | 1 | 229 | 85 | 313 | 2.08e-166 | 461 |
| MsG0880045761.01.T03 | MTR_5g019330 | 61.404 | 228 | 75 | 4 | 1 | 228 | 80 | 294 | 1.35e-93 | 276 |
| MsG0880045761.01.T03 | MTR_3g111610 | 58.065 | 217 | 87 | 3 | 1 | 216 | 83 | 296 | 4.45e-82 | 247 |
| MsG0880045761.01.T03 | MTR_1g021915 | 58.710 | 155 | 62 | 2 | 1 | 154 | 77 | 230 | 1.31e-54 | 175 |
| MsG0880045761.01.T03 | MTR_7g113780 | 32.701 | 211 | 127 | 2 | 1 | 209 | 77 | 274 | 8.91e-35 | 125 |
| MsG0880045761.01.T01 | MTR_8g078200 | 98.413 | 126 | 2 | 0 | 1 | 126 | 1 | 126 | 9.62e-83 | 249 |
| MsG0880045761.01.T01 | MTR_8g078200 | 95.876 | 97 | 3 | 1 | 123 | 218 | 217 | 313 | 9.18e-62 | 195 |
| MsG0880045761.01.T01 | MTR_5g019330 | 63.559 | 118 | 43 | 0 | 9 | 126 | 4 | 121 | 6.22e-45 | 152 |
| MsG0880045761.01.T01 | MTR_5g019330 | 51.064 | 94 | 32 | 5 | 125 | 217 | 214 | 294 | 1.19e-19 | 85.5 |
| MsG0880045761.01.T01 | MTR_3g111610 | 54.310 | 116 | 51 | 2 | 12 | 126 | 11 | 125 | 8.51e-34 | 123 |
| MsG0880045761.01.T01 | MTR_3g111610 | 44.872 | 78 | 40 | 2 | 128 | 205 | 222 | 296 | 1.90e-13 | 68.2 |
| MsG0880045761.01.T01 | MTR_1g021915 | 53.982 | 113 | 50 | 2 | 15 | 126 | 8 | 119 | 3.60e-29 | 109 |
| MsG0880045761.01.T02 | MTR_8g078200 | 98.722 | 313 | 4 | 0 | 1 | 313 | 1 | 313 | 0.0 | 621 |
| MsG0880045761.01.T02 | MTR_5g019330 | 62.333 | 300 | 100 | 4 | 13 | 312 | 8 | 294 | 3.04e-126 | 363 |
| MsG0880045761.01.T02 | MTR_3g111610 | 55.862 | 290 | 123 | 4 | 12 | 300 | 11 | 296 | 1.89e-106 | 312 |
| MsG0880045761.01.T02 | MTR_1g021915 | 61.000 | 200 | 76 | 2 | 15 | 213 | 8 | 206 | 2.22e-75 | 231 |
| MsG0880045761.01.T02 | MTR_7g113780 | 33.571 | 280 | 170 | 4 | 16 | 293 | 9 | 274 | 2.59e-38 | 137 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0880045761.01.T03 | AT4G36830 | 61.972 | 213 | 73 | 4 | 1 | 210 | 78 | 285 | 1.20e-89 | 266 |
| MsG0880045761.01.T03 | AT1G75000 | 60.825 | 194 | 74 | 2 | 1 | 193 | 76 | 268 | 8.28e-86 | 256 |
| MsG0880045761.01.T03 | AT4G36830 | 66.120 | 183 | 57 | 3 | 1 | 180 | 78 | 258 | 6.05e-82 | 247 |
| MsG0880045761.01.T03 | AT3G06470 | 33.690 | 187 | 116 | 5 | 28 | 209 | 95 | 278 | 7.40e-26 | 102 |
| MsG0880045761.01.T03 | AT3G06460 | 31.875 | 160 | 106 | 2 | 38 | 195 | 105 | 263 | 7.99e-22 | 91.7 |
| MsG0880045761.01.T01 | AT4G36830 | 60.345 | 116 | 44 | 1 | 13 | 126 | 6 | 121 | 6.22e-42 | 144 |
| MsG0880045761.01.T01 | AT4G36830 | 48.101 | 79 | 34 | 3 | 123 | 199 | 212 | 285 | 3.26e-17 | 78.6 |
| MsG0880045761.01.T01 | AT4G36830 | 60.345 | 116 | 44 | 1 | 13 | 126 | 6 | 121 | 1.51e-41 | 143 |
| MsG0880045761.01.T01 | AT1G75000 | 54.310 | 116 | 49 | 2 | 15 | 126 | 3 | 118 | 1.43e-33 | 122 |
| MsG0880045761.01.T01 | AT1G75000 | 52.459 | 61 | 27 | 2 | 123 | 182 | 209 | 268 | 1.18e-15 | 74.3 |
| MsG0880045761.01.T02 | AT4G36830 | 60.000 | 285 | 106 | 4 | 13 | 294 | 6 | 285 | 2.32e-118 | 342 |
| MsG0880045761.01.T02 | AT4G36830 | 62.745 | 255 | 90 | 3 | 13 | 264 | 6 | 258 | 8.02e-111 | 324 |
| MsG0880045761.01.T02 | AT1G75000 | 58.427 | 267 | 106 | 3 | 15 | 277 | 3 | 268 | 1.14e-110 | 323 |
| MsG0880045761.01.T02 | AT3G06470 | 32.394 | 284 | 175 | 7 | 15 | 293 | 7 | 278 | 1.41e-35 | 130 |
| MsG0880045761.01.T02 | AT3G06460 | 31.461 | 267 | 171 | 4 | 15 | 279 | 7 | 263 | 4.10e-32 | 121 |
Find 99 sgRNAs with CRISPR-Local
Find 106 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTTATGGTTATAGATTT+TGG | 0.113077 | 8:+63952376 | MsG0880045761.01.T02:CDS |
| CTTGTTTACTCTCTTGTTTA+TGG | 0.219721 | 8:+63952363 | MsG0880045761.01.T02:CDS |
| CTTCTGGTCGTGTCTTCTTT+TGG | 0.271814 | 8:+63952163 | MsG0880045761.01.T02:CDS |
| GAGCCATCGAAGTGGGGTTT+TGG | 0.273493 | 8:-63952115 | None:intergenic |
| GAGGCTGTGGAGGGCGGGGA+TGG | 0.298938 | 8:-63952001 | None:intergenic |
| AGGCTGTGGAGGGCGGGGAT+GGG | 0.344199 | 8:-63952000 | None:intergenic |
| GTTGTAATGGAATGGGTGCT+TGG | 0.350615 | 8:+63952523 | MsG0880045761.01.T02:CDS |
| GTGCCCTTGACCCGGCGATT+AGG | 0.358804 | 8:-63952683 | None:intergenic |
| CCCTTAGGTACACGACCTTC+TGG | 0.360013 | 8:+63952147 | MsG0880045761.01.T02:CDS |
| GTTGGTGCCACAGTCATTCA+TGG | 0.366206 | 8:+63951863 | MsG0880045761.01.T02:CDS |
| TGTGACGGCGGTTGGGGAAG+AGG | 0.373571 | 8:-63951966 | None:intergenic |
| GATGATGAGGTAGGTGGCTA+TGG | 0.381123 | 8:-63951914 | None:intergenic |
| AACTGTCAGATTCTGTTGTT+GGG | 0.385095 | 8:+63952441 | MsG0880045761.01.T02:CDS |
| TGGCTCCTTTGTTTCCCCTT+AGG | 0.386786 | 8:+63952132 | MsG0880045761.01.T02:CDS |
| TAGAGGGATGTGACGGCGGT+TGG | 0.388236 | 8:-63951974 | None:intergenic |
| TTGTAATGGAATGGGTGCTT+GGG | 0.388320 | 8:+63952524 | MsG0880045761.01.T02:CDS |
| AGAGGGATGTGACGGCGGTT+GGG | 0.399461 | 8:-63951973 | None:intergenic |
| CTTGACCCGGCGATTAGGTC+GGG | 0.400972 | 8:-63952678 | None:intergenic |
| GAACTGTCAGATTCTGTTGT+TGG | 0.405377 | 8:+63952440 | MsG0880045761.01.T02:CDS |
| GTTCTGAGAGGTAGTAGATA+AGG | 0.408246 | 8:-63951819 | None:intergenic |
| ATGGTGAGGCTGTGGAGGGC+GGG | 0.410769 | 8:-63952006 | None:intergenic |
| TCCGTGACACACAATGGTTC+TGG | 0.412013 | 8:+63952085 | MsG0880045761.01.T02:CDS |
| GGAGAGAGAGTGAGAGGTGG+AGG | 0.415211 | 8:-63951945 | None:intergenic |
| GAGGGATGTGACGGCGGTTG+GGG | 0.432017 | 8:-63951972 | None:intergenic |
| TGGTGAGGCTGTGGAGGGCG+GGG | 0.446984 | 8:-63952005 | None:intergenic |
| TTTGAAGTTGGTGGTTGTAA+TGG | 0.449023 | 8:+63952510 | MsG0880045761.01.T02:CDS |
| AGGGCGGGGATGGGTCCTAG+AGG | 0.455650 | 8:-63951991 | None:intergenic |
| TTCTGAGAGGTAGTAGATAA+GGG | 0.461158 | 8:-63951818 | None:intergenic |
| ATCTGACAGTTCAAAACAAA+CGG | 0.465978 | 8:-63952429 | None:intergenic |
| TCTTGCCCCGACCTAATCGC+CGG | 0.472510 | 8:+63952672 | MsG0880045761.01.T02:CDS |
| TTGGTGCCACAGTCATTCAT+GGG | 0.475065 | 8:+63951864 | MsG0880045761.01.T02:CDS |
| CCTTGACCCGGCGATTAGGT+CGG | 0.490369 | 8:-63952679 | None:intergenic |
| AGGGTTCCGATGGTTGTTAA+CGG | 0.491352 | 8:-63951799 | None:intergenic |
| ACCAGAAGGTCGTGTACCTA+AGG | 0.492368 | 8:-63952148 | None:intergenic |
| TGGGAAGAGTGAAAGGAGAA+TGG | 0.499594 | 8:+63952617 | MsG0880045761.01.T02:CDS |
| GGTTCAAGAGAGTGAATCAA+TGG | 0.499613 | 8:+63952638 | MsG0880045761.01.T02:CDS |
| CCGACCTAATCGCCGGGTCA+AGG | 0.503585 | 8:+63952679 | MsG0880045761.01.T02:CDS |
| CATGGTGAGGCTGTGGAGGG+CGG | 0.504783 | 8:-63952007 | None:intergenic |
| CAACGGAATGAGATGATTGA+TGG | 0.506733 | 8:-63951844 | None:intergenic |
| GGCGATTAGGTCGGGGCAAG+AGG | 0.511860 | 8:-63952670 | None:intergenic |
| AAGAACAGCAGTGTTGAGAA+TGG | 0.512696 | 8:-63952556 | None:intergenic |
| AAACCAACGTTGAAACTGAA+TGG | 0.524502 | 8:-63952281 | None:intergenic |
| AGTTGGTGGTTGTAATGGAA+TGG | 0.527844 | 8:+63952515 | MsG0880045761.01.T02:CDS |
| TGTGTCACGGATTTCTGATA+CGG | 0.532853 | 8:-63952073 | None:intergenic |
| GGAGGAAGAGAGAGATGATG+AGG | 0.532923 | 8:-63951927 | None:intergenic |
| CTTGCCCCGACCTAATCGCC+GGG | 0.536152 | 8:+63952673 | MsG0880045761.01.T02:CDS |
| GAAGAGAGAGATGATGAGGT+AGG | 0.540274 | 8:-63951923 | None:intergenic |
| GGAAGAGGAGAGAGAGTGAG+AGG | 0.541458 | 8:-63951951 | None:intergenic |
| AACAAAGGAGCCATCGAAGT+GGG | 0.546861 | 8:-63952122 | None:intergenic |
| TCGTGACCGTGCCCTTGACC+CGG | 0.547540 | 8:-63952691 | None:intergenic |
| CGACCTAATCGCCGGGTCAA+GGG | 0.547625 | 8:+63952680 | MsG0880045761.01.T02:CDS |
| CAACCTACGACGATGTAGAA+TGG | 0.552149 | 8:-63952238 | None:intergenic |
| AGAGGAGAGAGAGTGAGAGG+TGG | 0.553228 | 8:-63951948 | None:intergenic |
| TTGACCCGGCGATTAGGTCG+GGG | 0.555642 | 8:-63952677 | None:intergenic |
| ATGAATGACTGTGGCACCAA+CGG | 0.555711 | 8:-63951861 | None:intergenic |
| GGGCGGGGATGGGTCCTAGA+GGG | 0.556122 | 8:-63951990 | None:intergenic |
| GTTGGTGGTTGTAATGGAAT+GGG | 0.561971 | 8:+63952516 | MsG0880045761.01.T02:CDS |
| TGAGAGACATGGTGAGGCTG+TGG | 0.562000 | 8:-63952014 | None:intergenic |
| GAGAGAGATGATGAGGTAGG+TGG | 0.562715 | 8:-63951920 | None:intergenic |
| ATCTCCGCCACAATCTTCAC+CGG | 0.563488 | 8:+63952036 | MsG0880045761.01.T02:CDS |
| TGGGTCCTAGAGGGATGTGA+CGG | 0.574620 | 8:-63951981 | None:intergenic |
| GTCATTCATGGGGTTCAACA+TGG | 0.574769 | 8:+63951875 | MsG0880045761.01.T02:CDS |
| TAATCGCCGGGTCAAGGGCA+CGG | 0.578584 | 8:+63952685 | MsG0880045761.01.T02:CDS |
| CCAGAAGGTCGTGTACCTAA+GGG | 0.582318 | 8:-63952147 | None:intergenic |
| GCCAGAACCATTGTGTGTCA+CGG | 0.584140 | 8:-63952086 | None:intergenic |
| TGTAACGTGGCGTGTCATGT+TGG | 0.586501 | 8:+63952465 | MsG0880045761.01.T02:CDS |
| CATCAATCATCTCATTCCGT+TGG | 0.592426 | 8:+63951845 | MsG0880045761.01.T02:CDS |
| AGGTGGCTATGGAGGTGATG+AGG | 0.593761 | 8:-63951903 | None:intergenic |
| CAAAAGAAGACACGACCAGA+AGG | 0.593853 | 8:-63952162 | None:intergenic |
| CAGAAATCCGTGACACACAA+TGG | 0.594801 | 8:+63952079 | MsG0880045761.01.T02:CDS |
| AGACATGGTGAGGCTGTGGA+GGG | 0.595928 | 8:-63952010 | None:intergenic |
| TAGTGTACCGGTGAAGATTG+TGG | 0.598160 | 8:-63952043 | None:intergenic |
| TAACCATTCTACATCGTCGT+AGG | 0.599711 | 8:+63952235 | MsG0880045761.01.T02:CDS |
| TCACCACCGTTAACAACCAT+CGG | 0.600715 | 8:+63951793 | MsG0880045761.01.T02:CDS |
| GTCACGGATTTCTGATACGG+CGG | 0.603191 | 8:-63952070 | None:intergenic |
| GTAGTAGATAAGGGTTCCGA+TGG | 0.603257 | 8:-63951809 | None:intergenic |
| GTTCCAAAACCCCACTTCGA+TGG | 0.603311 | 8:+63952112 | MsG0880045761.01.T02:CDS |
| GTTGTTAACGGTGGTGATGA+CGG | 0.604640 | 8:-63951787 | None:intergenic |
| TACGGCGGAGATTAGTGTAC+CGG | 0.612304 | 8:-63952055 | None:intergenic |
| AACCGCCGTCACATCCCTCT+AGG | 0.618343 | 8:+63951976 | MsG0880045761.01.T02:CDS |
| GATGAGGTAGGTGGCTATGG+AGG | 0.619902 | 8:-63951911 | None:intergenic |
| GAGACATGGTGAGGCTGTGG+AGG | 0.636114 | 8:-63952011 | None:intergenic |
| TGATGACGGTGGTTTAGCCA+TGG | 0.641896 | 8:-63951773 | None:intergenic |
| TCTGTTGTTGGGTTGTAACG+TGG | 0.655015 | 8:+63952452 | MsG0880045761.01.T02:CDS |
| AACGGAATGAGATGATTGAT+GGG | 0.655086 | 8:-63951843 | None:intergenic |
| AAACAAAGGAGCCATCGAAG+TGG | 0.658352 | 8:-63952123 | None:intergenic |
| TGGTGCCACAGTCATTCATG+GGG | 0.661744 | 8:+63951865 | MsG0880045761.01.T02:CDS |
| TGATTGATGGGTGTTCTGAG+AGG | 0.661816 | 8:-63951831 | None:intergenic |
| CAGAAGGTCGTGTACCTAAG+GGG | 0.661964 | 8:-63952146 | None:intergenic |
| GAACCATTCAGTTTCAACGT+TGG | 0.662297 | 8:+63952278 | MsG0880045761.01.T02:CDS |
| GTTCCGATGGTTGTTAACGG+TGG | 0.665456 | 8:-63951796 | None:intergenic |
| ACAAAGGAGCCATCGAAGTG+GGG | 0.669067 | 8:-63952121 | None:intergenic |
| GTCCTAGAGGGATGTGACGG+CGG | 0.675692 | 8:-63951978 | None:intergenic |
| GTGTACCTAAGGGGAAACAA+AGG | 0.693808 | 8:-63952137 | None:intergenic |
| CGGAGATGAGAGACATGGTG+AGG | 0.705291 | 8:-63952020 | None:intergenic |
| GTTAACGGTGGTGATGACGG+TGG | 0.714126 | 8:-63951784 | None:intergenic |
| TTGAACCCCATGAATGACTG+TGG | 0.730911 | 8:-63951870 | None:intergenic |
| TGTACCGGTGAAGATTGTGG+CGG | 0.746298 | 8:-63952040 | None:intergenic |
| TGTGGCGGAGATGAGAGACA+TGG | 0.780597 | 8:-63952025 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTCATTTTTATGTG+AGG | + | Chr8:63952583-63952602 | MsG0880045761.01.T02:CDS | 15.0% |
| !!! | TTGTTTATGGTTATAGATTT+TGG | + | Chr8:63952376-63952395 | MsG0880045761.01.T02:CDS | 20.0% |
| !!! | CTTCATTTCTTTTTTGAAGT+TGG | + | Chr8:63952498-63952517 | MsG0880045761.01.T02:CDS | 25.0% |
| ATCTGACAGTTCAAAACAAA+CGG | - | Chr8:63952432-63952451 | None:intergenic | 30.0% | |
| ! | ATGTGAGGATGTATTTTGTT+GGG | + | Chr8:63952598-63952617 | MsG0880045761.01.T02:CDS | 30.0% |
| ! | CTTGTTTACTCTCTTGTTTA+TGG | + | Chr8:63952363-63952382 | MsG0880045761.01.T02:CDS | 30.0% |
| ! | TATGTGAGGATGTATTTTGT+TGG | + | Chr8:63952597-63952616 | MsG0880045761.01.T02:CDS | 30.0% |
| !!! | CATTTCTTTTTTGAAGTTGG+TGG | + | Chr8:63952501-63952520 | MsG0880045761.01.T02:CDS | 30.0% |
| AAACCAACGTTGAAACTGAA+TGG | - | Chr8:63952284-63952303 | None:intergenic | 35.0% | |
| AACGGAATGAGATGATTGAT+GGG | - | Chr8:63951846-63951865 | None:intergenic | 35.0% | |
| AACTGTCAGATTCTGTTGTT+GGG | + | Chr8:63952441-63952460 | MsG0880045761.01.T02:CDS | 35.0% | |
| ! | ATTTTGTTGGGAAGAGTGAA+AGG | + | Chr8:63952610-63952629 | MsG0880045761.01.T02:CDS | 35.0% |
| ! | TATAGATTTTGGACAGCGAT+TGG | + | Chr8:63952387-63952406 | MsG0880045761.01.T02:CDS | 35.0% |
| ! | TTCTGAGAGGTAGTAGATAA+GGG | - | Chr8:63951821-63951840 | None:intergenic | 35.0% |
| !! | TTTGAAGTTGGTGGTTGTAA+TGG | + | Chr8:63952510-63952529 | MsG0880045761.01.T02:CDS | 35.0% |
| !!! | CAACGTTGGTTTCTTTTCTA+TGG | + | Chr8:63952292-63952311 | MsG0880045761.01.T02:CDS | 35.0% |
| CAACGGAATGAGATGATTGA+TGG | - | Chr8:63951847-63951866 | None:intergenic | 40.0% | |
| CATCAATCATCTCATTCCGT+TGG | + | Chr8:63951845-63951864 | MsG0880045761.01.T02:CDS | 40.0% | |
| GAACCATTCAGTTTCAACGT+TGG | + | Chr8:63952278-63952297 | MsG0880045761.01.T02:CDS | 40.0% | |
| GAACTGTCAGATTCTGTTGT+TGG | + | Chr8:63952440-63952459 | MsG0880045761.01.T02:CDS | 40.0% | |
| GGTTCAAGAGAGTGAATCAA+TGG | + | Chr8:63952638-63952657 | MsG0880045761.01.T02:CDS | 40.0% | |
| TAACCATTCTACATCGTCGT+AGG | + | Chr8:63952235-63952254 | MsG0880045761.01.T02:CDS | 40.0% | |
| TGTGTCACGGATTTCTGATA+CGG | - | Chr8:63952076-63952095 | None:intergenic | 40.0% | |
| ! | AAGAACAGCAGTGTTGAGAA+TGG | - | Chr8:63952559-63952578 | None:intergenic | 40.0% |
| ! | TTGTAATGGAATGGGTGCTT+GGG | + | Chr8:63952524-63952543 | MsG0880045761.01.T02:CDS | 40.0% |
| !! | AGTTGGTGGTTGTAATGGAA+TGG | + | Chr8:63952515-63952534 | MsG0880045761.01.T02:CDS | 40.0% |
| !! | GTTCTGAGAGGTAGTAGATA+AGG | - | Chr8:63951822-63951841 | None:intergenic | 40.0% |
| !! | GTTGGTGGTTGTAATGGAAT+GGG | + | Chr8:63952516-63952535 | MsG0880045761.01.T02:CDS | 40.0% |
| AAACAAAGGAGCCATCGAAG+TGG | - | Chr8:63952126-63952145 | None:intergenic | 45.0% | |
| AACAAAGGAGCCATCGAAGT+GGG | - | Chr8:63952125-63952144 | None:intergenic | 45.0% | |
| AGGGTTCCGATGGTTGTTAA+CGG | - | Chr8:63951802-63951821 | None:intergenic | 45.0% | |
| ATGAATGACTGTGGCACCAA+CGG | - | Chr8:63951864-63951883 | None:intergenic | 45.0% | |
| CAAAAGAAGACACGACCAGA+AGG | - | Chr8:63952165-63952184 | None:intergenic | 45.0% | |
| CAACCTACGACGATGTAGAA+TGG | - | Chr8:63952241-63952260 | None:intergenic | 45.0% | |
| CAGAAATCCGTGACACACAA+TGG | + | Chr8:63952079-63952098 | MsG0880045761.01.T02:CDS | 45.0% | |
| GAAGAGAGAGATGATGAGGT+AGG | - | Chr8:63951926-63951945 | None:intergenic | 45.0% | |
| GTAGTAGATAAGGGTTCCGA+TGG | - | Chr8:63951812-63951831 | None:intergenic | 45.0% | |
| GTCATTCATGGGGTTCAACA+TGG | + | Chr8:63951875-63951894 | MsG0880045761.01.T02:CDS | 45.0% | |
| GTGTACCTAAGGGGAAACAA+AGG | - | Chr8:63952140-63952159 | None:intergenic | 45.0% | |
| TCACCACCGTTAACAACCAT+CGG | + | Chr8:63951793-63951812 | MsG0880045761.01.T02:CDS | 45.0% | |
| TGGGAAGAGTGAAAGGAGAA+TGG | + | Chr8:63952617-63952636 | MsG0880045761.01.T02:CDS | 45.0% | |
| TTGAACCCCATGAATGACTG+TGG | - | Chr8:63951873-63951892 | None:intergenic | 45.0% | |
| ! | CTTCTGGTCGTGTCTTCTTT+TGG | + | Chr8:63952163-63952182 | MsG0880045761.01.T02:CDS | 45.0% |
| ! | GTTGTAATGGAATGGGTGCT+TGG | + | Chr8:63952523-63952542 | MsG0880045761.01.T02:CDS | 45.0% |
| ! | GTTGTTAACGGTGGTGATGA+CGG | - | Chr8:63951790-63951809 | None:intergenic | 45.0% |
| ! | TAGTGTACCGGTGAAGATTG+TGG | - | Chr8:63952046-63952065 | None:intergenic | 45.0% |
| ! | TCTGTTGTTGGGTTGTAACG+TGG | + | Chr8:63952452-63952471 | MsG0880045761.01.T02:CDS | 45.0% |
| ! | TGATTGATGGGTGTTCTGAG+AGG | - | Chr8:63951834-63951853 | None:intergenic | 45.0% |
| !! | TTGGTGCCACAGTCATTCAT+GGG | + | Chr8:63951864-63951883 | MsG0880045761.01.T02:CDS | 45.0% |
| ACAAAGGAGCCATCGAAGTG+GGG | - | Chr8:63952124-63952143 | None:intergenic | 50.0% | |
| ACCAGAAGGTCGTGTACCTA+AGG | - | Chr8:63952151-63952170 | None:intergenic | 50.0% | |
| ATCTCCGCCACAATCTTCAC+CGG | + | Chr8:63952036-63952055 | MsG0880045761.01.T02:CDS | 50.0% | |
| CAGAAGGTCGTGTACCTAAG+GGG | - | Chr8:63952149-63952168 | None:intergenic | 50.0% | |
| CCAGAAGGTCGTGTACCTAA+GGG | - | Chr8:63952150-63952169 | None:intergenic | 50.0% | |
| GAGAGAGATGATGAGGTAGG+TGG | - | Chr8:63951923-63951942 | None:intergenic | 50.0% | |
| GATGATGAGGTAGGTGGCTA+TGG | - | Chr8:63951917-63951936 | None:intergenic | 50.0% | |
| GCCAGAACCATTGTGTGTCA+CGG | - | Chr8:63952089-63952108 | None:intergenic | 50.0% | |
| GGAGGAAGAGAGAGATGATG+AGG | - | Chr8:63951930-63951949 | None:intergenic | 50.0% | |
| GTCACGGATTTCTGATACGG+CGG | - | Chr8:63952073-63952092 | None:intergenic | 50.0% | |
| GTTCCAAAACCCCACTTCGA+TGG | + | Chr8:63952112-63952131 | MsG0880045761.01.T02:CDS | 50.0% | |
| GTTCCGATGGTTGTTAACGG+TGG | - | Chr8:63951799-63951818 | None:intergenic | 50.0% | |
| TACGGCGGAGATTAGTGTAC+CGG | - | Chr8:63952058-63952077 | None:intergenic | 50.0% | |
| TCCGTGACACACAATGGTTC+TGG | + | Chr8:63952085-63952104 | MsG0880045761.01.T02:CDS | 50.0% | |
| TGTAACGTGGCGTGTCATGT+TGG | + | Chr8:63952465-63952484 | MsG0880045761.01.T02:CDS | 50.0% | |
| ! | TGGCTCCTTTGTTTCCCCTT+AGG | + | Chr8:63952132-63952151 | MsG0880045761.01.T02:CDS | 50.0% |
| ! | TGTACCGGTGAAGATTGTGG+CGG | - | Chr8:63952043-63952062 | None:intergenic | 50.0% |
| !! | GTTGGTGCCACAGTCATTCA+TGG | + | Chr8:63951863-63951882 | MsG0880045761.01.T02:CDS | 50.0% |
| !! | TGGTGCCACAGTCATTCATG+GGG | + | Chr8:63951865-63951884 | MsG0880045761.01.T02:CDS | 50.0% |
| AGACATGGTGAGGCTGTGGA+GGG | - | Chr8:63952013-63952032 | None:intergenic | 55.0% | |
| AGAGGAGAGAGAGTGAGAGG+TGG | - | Chr8:63951951-63951970 | None:intergenic | 55.0% | |
| AGGTGGCTATGGAGGTGATG+AGG | - | Chr8:63951906-63951925 | None:intergenic | 55.0% | |
| CCCTTAGGTACACGACCTTC+TGG | + | Chr8:63952147-63952166 | MsG0880045761.01.T02:CDS | 55.0% | |
| CGGAGATGAGAGACATGGTG+AGG | - | Chr8:63952023-63952042 | None:intergenic | 55.0% | |
| GATGAGGTAGGTGGCTATGG+AGG | - | Chr8:63951914-63951933 | None:intergenic | 55.0% | |
| GGAAGAGGAGAGAGAGTGAG+AGG | - | Chr8:63951954-63951973 | None:intergenic | 55.0% | |
| TGAGAGACATGGTGAGGCTG+TGG | - | Chr8:63952017-63952036 | None:intergenic | 55.0% | |
| TGGGTCCTAGAGGGATGTGA+CGG | - | Chr8:63951984-63952003 | None:intergenic | 55.0% | |
| ! | GAGCCATCGAAGTGGGGTTT+TGG | - | Chr8:63952118-63952137 | None:intergenic | 55.0% |
| ! | TGTGGCGGAGATGAGAGACA+TGG | - | Chr8:63952028-63952047 | None:intergenic | 55.0% |
| !! | GTTAACGGTGGTGATGACGG+TGG | - | Chr8:63951787-63951806 | None:intergenic | 55.0% |
| AACCGCCGTCACATCCCTCT+AGG | + | Chr8:63951976-63951995 | MsG0880045761.01.T02:CDS | 60.0% | |
| AGAGGGATGTGACGGCGGTT+GGG | - | Chr8:63951976-63951995 | None:intergenic | 60.0% | |
| CCTTGACCCGGCGATTAGGT+CGG | - | Chr8:63952682-63952701 | None:intergenic | 60.0% | |
| CGACCTAATCGCCGGGTCAA+GGG | + | Chr8:63952680-63952699 | MsG0880045761.01.T02:CDS | 60.0% | |
| CTTGACCCGGCGATTAGGTC+GGG | - | Chr8:63952681-63952700 | None:intergenic | 60.0% | |
| GAGACATGGTGAGGCTGTGG+AGG | - | Chr8:63952014-63952033 | None:intergenic | 60.0% | |
| GGAGAGAGAGTGAGAGGTGG+AGG | - | Chr8:63951948-63951967 | None:intergenic | 60.0% | |
| GTCCTAGAGGGATGTGACGG+CGG | - | Chr8:63951981-63952000 | None:intergenic | 60.0% | |
| TAATCGCCGGGTCAAGGGCA+CGG | + | Chr8:63952685-63952704 | MsG0880045761.01.T02:CDS | 60.0% | |
| TAGAGGGATGTGACGGCGGT+TGG | - | Chr8:63951977-63951996 | None:intergenic | 60.0% | |
| TCTTGCCCCGACCTAATCGC+CGG | + | Chr8:63952672-63952691 | MsG0880045761.01.T02:CDS | 60.0% | |
| TTGACCCGGCGATTAGGTCG+GGG | - | Chr8:63952680-63952699 | None:intergenic | 60.0% | |
| ATGGTGAGGCTGTGGAGGGC+GGG | - | Chr8:63952009-63952028 | None:intergenic | 65.0% | |
| CATGGTGAGGCTGTGGAGGG+CGG | - | Chr8:63952010-63952029 | None:intergenic | 65.0% | |
| CCGACCTAATCGCCGGGTCA+AGG | + | Chr8:63952679-63952698 | MsG0880045761.01.T02:CDS | 65.0% | |
| CTTGCCCCGACCTAATCGCC+GGG | + | Chr8:63952673-63952692 | MsG0880045761.01.T02:CDS | 65.0% | |
| GAGGGATGTGACGGCGGTTG+GGG | - | Chr8:63951975-63951994 | None:intergenic | 65.0% | |
| GGCGATTAGGTCGGGGCAAG+AGG | - | Chr8:63952673-63952692 | None:intergenic | 65.0% | |
| GTGCCCTTGACCCGGCGATT+AGG | - | Chr8:63952686-63952705 | None:intergenic | 65.0% | |
| TCGTGACCGTGCCCTTGACC+CGG | - | Chr8:63952694-63952713 | None:intergenic | 65.0% | |
| TGTGACGGCGGTTGGGGAAG+AGG | - | Chr8:63951969-63951988 | None:intergenic | 65.0% | |
| AGGCTGTGGAGGGCGGGGAT+GGG | - | Chr8:63952003-63952022 | None:intergenic | 70.0% | |
| AGGGCGGGGATGGGTCCTAG+AGG | - | Chr8:63951994-63952013 | None:intergenic | 70.0% | |
| GGGCGGGGATGGGTCCTAGA+GGG | - | Chr8:63951993-63952012 | None:intergenic | 70.0% | |
| TGGTGAGGCTGTGGAGGGCG+GGG | - | Chr8:63952008-63952027 | None:intergenic | 70.0% | |
| GAGGCTGTGGAGGGCGGGGA+TGG | - | Chr8:63952004-63952023 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr8 | gene | 63951775 | 63952716 | 63951775 | ID=MsG0880045761.01;Name=MsG0880045761.01 |
| Chr8 | mRNA | 63951775 | 63952716 | 63951775 | ID=MsG0880045761.01.T01;Parent=MsG0880045761.01;Name=MsG0880045761.01.T01;_AED=0.32;_eAED=0.33;_QI=0|0|0|1|0|0|2|0|218 |
| Chr8 | exon | 63951775 | 63952153 | 63951775 | ID=MsG0880045761.01.T01:exon:24350;Parent=MsG0880045761.01.T01 |
| Chr8 | exon | 63952439 | 63952716 | 63952439 | ID=MsG0880045761.01.T01:exon:24351;Parent=MsG0880045761.01.T01 |
| Chr8 | CDS | 63951775 | 63952153 | 63951775 | ID=MsG0880045761.01.T01:cds;Parent=MsG0880045761.01.T01 |
| Chr8 | CDS | 63952439 | 63952716 | 63952439 | ID=MsG0880045761.01.T01:cds;Parent=MsG0880045761.01.T01 |
| Chr8 | mRNA | 63951775 | 63952716 | 63951775 | ID=MsG0880045761.01.T02;Parent=MsG0880045761.01;Name=MsG0880045761.01.T02;_AED=0.25;_eAED=0.25;_QI=0|-1|0|1|-1|0|1|0|313 |
| Chr8 | exon | 63951775 | 63952716 | 63951775 | ID=MsG0880045761.01.T02:exon:24352;Parent=MsG0880045761.01.T02 |
| Chr8 | CDS | 63951775 | 63952716 | 63951775 | ID=MsG0880045761.01.T02:cds;Parent=MsG0880045761.01.T02 |
| Chr8 | mRNA | 63952027 | 63952716 | 63952027 | ID=MsG0880045761.01.T03;Parent=MsG0880045761.01;Name=MsG0880045761.01.T03;_AED=0.32;_eAED=0.32;_QI=0|-1|0|1|-1|0|1|0|229 |
| Chr8 | exon | 63952027 | 63952716 | 63952027 | ID=MsG0880045761.01.T03:exon:24353;Parent=MsG0880045761.01.T03 |
| Chr8 | CDS | 63952027 | 63952716 | 63952027 | ID=MsG0880045761.01.T03:cds;Parent=MsG0880045761.01.T03 |
| Gene Sequence |
| Protein sequence |
