Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029218.01.T01 | XP_039690495.1 | 95.238 | 126 | 5 | 1 | 1 | 125 | 1 | 126 | 7.96E-70 | 217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029218.01.T01 | G7K263 | 95.238 | 126 | 5 | 1 | 1 | 125 | 1 | 126 | 3.80e-70 | 217 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048595.01 | MsG0580029218.01 | 0.807150 | 5.816386e-50 | 3.215435e-47 |
| MsG0080049023.01 | MsG0580029218.01 | -0.826571 | 2.521540e-54 | 2.373624e-51 |
| MsG0180000028.01 | MsG0580029218.01 | 0.814974 | 1.172022e-51 | 7.978714e-49 |
| MsG0180000367.01 | MsG0580029218.01 | 0.818993 | 1.466813e-52 | 1.115053e-49 |
| MsG0180000466.01 | MsG0580029218.01 | 0.845439 | 4.057351e-59 | 6.761780e-56 |
| MsG0180000719.01 | MsG0580029218.01 | -0.809004 | 2.344404e-50 | 1.360536e-47 |
| MsG0180001004.01 | MsG0580029218.01 | 0.820939 | 5.262478e-53 | 4.222491e-50 |
| MsG0180001054.01 | MsG0580029218.01 | -0.813839 | 2.088890e-51 | 1.379018e-48 |
| MsG0180001169.01 | MsG0580029218.01 | 0.810278 | 1.247798e-50 | 7.489734e-48 |
| MsG0180002404.01 | MsG0580029218.01 | 0.800242 | 1.579991e-48 | 7.320239e-46 |
| MsG0180003504.01 | MsG0580029218.01 | 0.835789 | 1.367477e-56 | 1.689914e-53 |
| MsG0180003905.01 | MsG0580029218.01 | 0.820504 | 6.625074e-53 | 5.251525e-50 |
| MsG0180004467.01 | MsG0580029218.01 | 0.822865 | 1.884348e-53 | 1.596502e-50 |
| MsG0180005267.01 | MsG0580029218.01 | 0.801270 | 9.745858e-49 | 4.634638e-46 |
| MsG0180005369.01 | MsG0580029218.01 | -0.803496 | 3.390498e-49 | 1.706396e-46 |
| MsG0180005819.01 | MsG0580029218.01 | 0.821115 | 4.793109e-53 | 3.864686e-50 |
| MsG0180006183.01 | MsG0580029218.01 | 0.845774 | 3.292772e-59 | 5.547694e-56 |
| MsG0280010617.01 | MsG0580029218.01 | 0.832031 | 1.192129e-55 | 1.316582e-52 |
| MsG0280010994.01 | MsG0580029218.01 | -0.822650 | 2.114430e-53 | 1.780567e-50 |
| MsG0280011281.01 | MsG0580029218.01 | -0.817855 | 2.656118e-52 | 1.956567e-49 |
| MsG0380014639.01 | MsG0580029218.01 | -0.811355 | 7.298760e-51 | 4.507804e-48 |
| MsG0380014735.01 | MsG0580029218.01 | -0.806714 | 7.194191e-50 | 3.932451e-47 |
| MsG0480018486.01 | MsG0580029218.01 | 0.809404 | 1.923901e-50 | 1.128605e-47 |
| MsG0480019171.01 | MsG0580029218.01 | 0.839778 | 1.292405e-57 | 1.803484e-54 |
| MsG0480019818.01 | MsG0580029218.01 | 0.802192 | 6.303125e-49 | 3.068234e-46 |
| MsG0480021151.01 | MsG0580029218.01 | -0.851206 | 1.032103e-60 | 2.073415e-57 |
| MsG0480021231.01 | MsG0580029218.01 | 0.813085 | 3.058972e-51 | 1.978462e-48 |
| MsG0480021740.01 | MsG0580029218.01 | 0.804092 | 2.550298e-49 | 1.303321e-46 |
| MsG0480023125.01 | MsG0580029218.01 | 0.801139 | 1.036754e-48 | 4.914141e-46 |
| MsG0480023364.01 | MsG0580029218.01 | 0.802658 | 5.054154e-49 | 2.489610e-46 |
| MsG0480023386.01 | MsG0580029218.01 | -0.825993 | 3.461815e-54 | 3.205798e-51 |
| MsG0480023528.01 | MsG0580029218.01 | 0.819431 | 1.165580e-52 | 8.967731e-50 |
| MsG0580024980.01 | MsG0580029218.01 | 0.815748 | 7.887543e-52 | 5.484798e-49 |
| MsG0580025633.01 | MsG0580029218.01 | 0.830755 | 2.456465e-55 | 2.612328e-52 |
| MsG0580026029.01 | MsG0580029218.01 | 0.815239 | 1.023469e-51 | 7.017516e-49 |
| MsG0380015402.01 | MsG0580029218.01 | 0.832835 | 7.532758e-56 | 8.519582e-53 |
| MsG0380015828.01 | MsG0580029218.01 | -0.825090 | 5.664368e-54 | 5.112408e-51 |
| MsG0380016031.01 | MsG0580029218.01 | 0.848442 | 6.112583e-60 | 1.121984e-56 |
| MsG0380016250.01 | MsG0580029218.01 | 0.837294 | 5.657934e-57 | 7.316604e-54 |
| MsG0380016819.01 | MsG0580029218.01 | 0.827054 | 1.933438e-54 | 1.845667e-51 |
| MsG0380017030.01 | MsG0580029218.01 | 0.804650 | 1.951425e-49 | 1.011675e-46 |
| MsG0380017812.01 | MsG0580029218.01 | -0.800343 | 1.506779e-48 | 6.999280e-46 |
| MsG0380017826.01 | MsG0580029218.01 | 0.817674 | 2.917131e-52 | 2.138239e-49 |
| MsG0380017901.01 | MsG0580029218.01 | 0.809803 | 1.579464e-50 | 9.364072e-48 |
| MsG0380018035.01 | MsG0580029218.01 | -0.829319 | 5.502733e-55 | 5.613323e-52 |
| MsG0480018362.01 | MsG0580029218.01 | 0.839655 | 1.391328e-57 | 1.934137e-54 |
| MsG0580026343.01 | MsG0580029218.01 | 0.812550 | 4.007101e-51 | 2.555397e-48 |
| MsG0580027135.01 | MsG0580029218.01 | 0.825956 | 3.533408e-54 | 3.268552e-51 |
| MsG0580027276.01 | MsG0580029218.01 | -0.814396 | 1.574122e-51 | 1.055077e-48 |
| MsG0580027854.01 | MsG0580029218.01 | 0.812036 | 5.187831e-51 | 3.262671e-48 |
| MsG0580028490.01 | MsG0580029218.01 | 0.813977 | 1.947738e-51 | 1.290620e-48 |
| MsG0580029218.01 | MsG0580029696.01 | 0.823510 | 1.332494e-53 | 1.149675e-50 |
| MsG0580029218.01 | MsG0580030141.01 | 0.838373 | 2.989383e-57 | 3.996014e-54 |
| MsG0580029218.01 | MsG0680030296.01 | 0.803312 | 3.702038e-49 | 1.854276e-46 |
| MsG0580029218.01 | MsG0680030644.01 | -0.810249 | 1.266437e-50 | 7.595948e-48 |
| MsG0580029218.01 | MsG0680031204.01 | -0.821785 | 3.356636e-53 | 2.757714e-50 |
| MsG0580029218.01 | MsG0680031356.01 | 0.827963 | 1.170271e-54 | 1.147255e-51 |
| MsG0580029218.01 | MsG0680035905.01 | 0.811090 | 8.329316e-51 | 5.108898e-48 |
| MsG0580029218.01 | MsG0780037458.01 | -0.810729 | 9.974162e-51 | 6.059301e-48 |
| MsG0580029218.01 | MsG0780038108.01 | -0.803152 | 3.995089e-49 | 1.992964e-46 |
| MsG0580029218.01 | MsG0780038573.01 | -0.800316 | 1.525981e-48 | 7.083731e-46 |
| MsG0580029218.01 | MsG0780038647.01 | 0.802249 | 6.137548e-49 | 2.992059e-46 |
| MsG0580029218.01 | MsG0780040321.01 | -0.804327 | 2.278479e-49 | 1.171424e-46 |
| MsG0580029218.01 | MsG0780040716.01 | 0.840835 | 6.845510e-58 | 9.871888e-55 |
| MsG0580029218.01 | MsG0780040978.01 | 0.844573 | 6.955498e-59 | 1.127744e-55 |
| MsG0580029218.01 | MsG0780040990.01 | 0.826092 | 3.279644e-54 | 3.045441e-51 |
| MsG0580029218.01 | MsG0780041560.01 | 0.814815 | 1.271501e-51 | 8.618727e-49 |
| MsG0580029218.01 | MsG0880042122.01 | 0.809655 | 1.699518e-50 | 1.003656e-47 |
| MsG0580029218.01 | MsG0880042392.01 | 0.823496 | 1.342638e-53 | 1.157996e-50 |
| MsG0580029218.01 | MsG0880043495.01 | 0.809069 | 2.270593e-50 | 1.320044e-47 |
| MsG0580029218.01 | MsG0880043550.01 | 0.844684 | 6.492315e-59 | 1.056247e-55 |
| MsG0580029218.01 | MsG0880044317.01 | -0.806328 | 8.676793e-50 | 4.696353e-47 |
| MsG0580029218.01 | MsG0880044548.01 | -0.807116 | 5.913663e-50 | 3.266277e-47 |
| MsG0580029218.01 | MsG0880044968.01 | -0.831732 | 1.412416e-55 | 1.546361e-52 |
| MsG0580029218.01 | MsG0880045356.01 | 0.829905 | 3.962855e-55 | 4.111835e-52 |
| MsG0580029218.01 | MsG0880045369.01 | -0.805367 | 1.381441e-49 | 7.295260e-47 |
| MsG0580029218.01 | MsG0880045385.01 | -0.805489 | 1.302396e-49 | 6.899411e-47 |
| MsG0580029218.01 | MsG0880045725.01 | 0.848905 | 4.549301e-60 | 8.476906e-57 |
| MsG0580029218.01 | MsG0880045761.01 | -0.817699 | 2.879230e-52 | 2.111872e-49 |
| MsG0580029218.01 | MsG0880045991.01 | 0.844706 | 6.401761e-59 | 1.042260e-55 |
| MsG0580029218.01 | MsG0880046010.01 | -0.822197 | 2.694714e-53 | 2.239900e-50 |
| MsG0580029218.01 | MsG0880046189.01 | -0.811156 | 8.060514e-51 | 4.952407e-48 |
| MsG0580029218.01 | MsG0880047057.01 | 0.818211 | 2.206460e-52 | 1.641259e-49 |
| MsG0580029218.01 | MsG0880047090.01 | 0.842836 | 2.027646e-58 | 3.112601e-55 |
| MsG0580029218.01 | MsG0880047450.01 | 0.829606 | 4.686096e-55 | 4.819732e-52 |
| MsG0580029218.01 | MsG0880047704.01 | 0.829838 | 4.113253e-55 | 4.260032e-52 |
| MsG0280006534.01 | MsG0580029218.01 | -0.817241 | 3.652426e-52 | 2.645501e-49 |
| MsG0280006851.01 | MsG0580029218.01 | 0.808085 | 3.683409e-50 | 2.086586e-47 |
| MsG0280007163.01 | MsG0580029218.01 | 0.811981 | 5.332435e-51 | 3.348757e-48 |
| MsG0280007653.01 | MsG0580029218.01 | -0.825282 | 5.103834e-54 | 4.631514e-51 |
| MsG0280009094.01 | MsG0580029218.01 | -0.806209 | 9.193752e-50 | 4.961295e-47 |
| MsG0280009432.01 | MsG0580029218.01 | 0.802877 | 4.553343e-49 | 2.255525e-46 |
| MsG0280009526.01 | MsG0580029218.01 | 0.829551 | 4.832709e-55 | 4.962178e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029218.01.T01 | MTR_5g082940 | 95.238 | 126 | 5 | 1 | 1 | 125 | 1 | 126 | 9.64e-74 | 217 |
| MsG0580029218.01.T01 | MTR_3g071300 | 47.794 | 136 | 53 | 4 | 1 | 125 | 1 | 129 | 1.43e-35 | 120 |
| MsG0580029218.01.T01 | MTR_3g094000 | 44.068 | 59 | 33 | 0 | 72 | 130 | 89 | 147 | 1.52e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580029218.01.T01 | AT3G11110 | 32.727 | 110 | 71 | 2 | 18 | 125 | 22 | 130 | 4.35e-11 | 57.4 |
| MsG0580029218.01.T01 | AT2G17450 | 30.894 | 123 | 71 | 4 | 15 | 130 | 15 | 130 | 6.73e-11 | 57.4 |
Find 41 sgRNAs with CRISPR-Local
Find 44 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGGGGAGTGTGGTGGTTT+TGG | 0.221415 | 5:+93868996 | None:intergenic |
| AGTGGTTCGTCTTCGGGTTC+GGG | 0.262925 | 5:+93869112 | None:intergenic |
| CAATGCATGGTTTGAAGTAT+TGG | 0.271086 | 5:+93868886 | None:intergenic |
| GAGTGGTTCGTCTTCGGGTT+CGG | 0.280107 | 5:+93869111 | None:intergenic |
| ACTTGGAGTGGTTCGTCTTC+GGG | 0.286558 | 5:+93869106 | None:intergenic |
| GACTTGGAGTGGTTCGTCTT+CGG | 0.310812 | 5:+93869105 | None:intergenic |
| CACTCTTCCTCTGTGCCCGC+TGG | 0.403523 | 5:-93869024 | MsG0580029218.01.T01:CDS |
| TTGGATTGGTGTAGTATGAT+AGG | 0.417548 | 5:+93868905 | None:intergenic |
| GGCGTTGGCGTCGAGTCCTT+CGG | 0.420894 | 5:+93868940 | None:intergenic |
| TATGATAGGAAGCTTCTTGA+TGG | 0.447186 | 5:+93868919 | None:intergenic |
| GGAGTTTGTGGCCTTTGACT+TGG | 0.470416 | 5:+93869089 | None:intergenic |
| AAACCATGCATTGGAGGAAA+CGG | 0.503937 | 5:-93868876 | MsG0580029218.01.T01:CDS |
| AGGAAGCTTCTTGATGGCGT+TGG | 0.511777 | 5:+93868925 | None:intergenic |
| TACTTCAAACCATGCATTGG+AGG | 0.519213 | 5:-93868882 | MsG0580029218.01.T01:CDS |
| CAATACTTCAAACCATGCAT+TGG | 0.523711 | 5:-93868885 | MsG0580029218.01.T01:CDS |
| CAATGAAGAAGAGGAGTTTG+TGG | 0.523900 | 5:+93869077 | None:intergenic |
| ATTGTGAATGTGTTGATGCA+TGG | 0.528588 | 5:-93868779 | MsG0580029218.01.T01:CDS |
| CATGGTTTGAAGTATTGGAT+TGG | 0.530983 | 5:+93868891 | None:intergenic |
| GAGGATGATGATGGTGAAGA+TGG | 0.534987 | 5:+93869054 | None:intergenic |
| TGTTTAAGCACGTTTAGAGA+TGG | 0.546859 | 5:-93868842 | MsG0580029218.01.T01:CDS |
| GAGATGGCGCGTGGGGAGTG+TGG | 0.554524 | 5:+93868987 | None:intergenic |
| ATTCCGTTTCCTCCAATGCA+TGG | 0.554845 | 5:+93868873 | None:intergenic |
| TTGTGGCCTTTGACTTGGAG+TGG | 0.557650 | 5:+93869094 | None:intergenic |
| TGAAGATGGCAATGAAGAAG+AGG | 0.560013 | 5:+93869068 | None:intergenic |
| GTGGTTCGTCTTCGGGTTCG+GGG | 0.568042 | 5:+93869113 | None:intergenic |
| TGGAGGTGTGAGATGGCGCG+TGG | 0.572879 | 5:+93868978 | None:intergenic |
| CTAACATCAAAACATTCGAC+TGG | 0.578650 | 5:-93869144 | MsG0580029218.01.T01:CDS |
| GGAGGTGTGAGATGGCGCGT+GGG | 0.578793 | 5:+93868979 | None:intergenic |
| AGAGGAAGAGTGCTGTGAAG+AGG | 0.584195 | 5:+93869035 | None:intergenic |
| GACGAACCACTCCAAGTCAA+AGG | 0.593233 | 5:-93869100 | MsG0580029218.01.T01:CDS |
| ATGGCGCGTGGGGAGTGTGG+TGG | 0.607095 | 5:+93868990 | None:intergenic |
| GAGGTGTGAGATGGCGCGTG+GGG | 0.607748 | 5:+93868980 | None:intergenic |
| CACGTTTAGAGATGGTGAGA+AGG | 0.608612 | 5:-93868834 | MsG0580029218.01.T01:CDS |
| TGCTGTGAAGAGGATGATGA+TGG | 0.611187 | 5:+93869045 | None:intergenic |
| ACATTCTTCTCTCAATCCGA+AGG | 0.611520 | 5:-93868956 | MsG0580029218.01.T01:CDS |
| TTTGATGTTAGGGTTTGACA+TGG | 0.641304 | 5:+93869156 | None:intergenic |
| GGAAGAGCCAGCGGGCACAG+AGG | 0.642468 | 5:+93869017 | None:intergenic |
| AAGAATGTGGAGGTGTGAGA+TGG | 0.658890 | 5:+93868971 | None:intergenic |
| TTCGGATTGAGAGAAGAATG+TGG | 0.662383 | 5:+93868958 | None:intergenic |
| ATGAAATAATGATCACAACT+CGG | 0.680055 | 5:+93868800 | None:intergenic |
| GGATTGAGAGAAGAATGTGG+AGG | 0.769620 | 5:+93868961 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATGAAATAATGATCACAACT+CGG | + | Chr5:93869129-93869148 | None:intergenic | 25.0% |
| !!! | AGTCGAATGTTTTGATGTTA+GGG | + | Chr5:93868783-93868802 | None:intergenic | 30.0% |
| CAATACTTCAAACCATGCAT+TGG | - | Chr5:93869041-93869060 | MsG0580029218.01.T01:CDS | 35.0% | |
| CTAACATCAAAACATTCGAC+TGG | - | Chr5:93868782-93868801 | MsG0580029218.01.T01:CDS | 35.0% | |
| TATGATAGGAAGCTTCTTGA+TGG | + | Chr5:93869010-93869029 | None:intergenic | 35.0% | |
| TGTTTAAGCACGTTTAGAGA+TGG | - | Chr5:93869084-93869103 | MsG0580029218.01.T01:CDS | 35.0% | |
| ! | ATTGTGAATGTGTTGATGCA+TGG | - | Chr5:93869147-93869166 | MsG0580029218.01.T01:CDS | 35.0% |
| ! | CAATGCATGGTTTGAAGTAT+TGG | + | Chr5:93869043-93869062 | None:intergenic | 35.0% |
| !! | CATGGTTTGAAGTATTGGAT+TGG | + | Chr5:93869038-93869057 | None:intergenic | 35.0% |
| !! | TTGGATTGGTGTAGTATGAT+AGG | + | Chr5:93869024-93869043 | None:intergenic | 35.0% |
| !!! | CAGTCGAATGTTTTGATGTT+AGG | + | Chr5:93868784-93868803 | None:intergenic | 35.0% |
| AAACCATGCATTGGAGGAAA+CGG | - | Chr5:93869050-93869069 | MsG0580029218.01.T01:CDS | 40.0% | |
| ACATTCTTCTCTCAATCCGA+AGG | - | Chr5:93868970-93868989 | MsG0580029218.01.T01:CDS | 40.0% | |
| CAATGAAGAAGAGGAGTTTG+TGG | + | Chr5:93868852-93868871 | None:intergenic | 40.0% | |
| TACTTCAAACCATGCATTGG+AGG | - | Chr5:93869044-93869063 | MsG0580029218.01.T01:CDS | 40.0% | |
| TGAAGATGGCAATGAAGAAG+AGG | + | Chr5:93868861-93868880 | None:intergenic | 40.0% | |
| TTCGGATTGAGAGAAGAATG+TGG | + | Chr5:93868971-93868990 | None:intergenic | 40.0% | |
| ATTCCGTTTCCTCCAATGCA+TGG | + | Chr5:93869056-93869075 | None:intergenic | 45.0% | |
| CACGTTTAGAGATGGTGAGA+AGG | - | Chr5:93869092-93869111 | MsG0580029218.01.T01:CDS | 45.0% | |
| GGATTGAGAGAAGAATGTGG+AGG | + | Chr5:93868968-93868987 | None:intergenic | 45.0% | |
| TGCTGTGAAGAGGATGATGA+TGG | + | Chr5:93868884-93868903 | None:intergenic | 45.0% | |
| ! | AAGAATGTGGAGGTGTGAGA+TGG | + | Chr5:93868958-93868977 | None:intergenic | 45.0% |
| !! | GAGGATGATGATGGTGAAGA+TGG | + | Chr5:93868875-93868894 | None:intergenic | 45.0% |
| ACTTGGAGTGGTTCGTCTTC+GGG | + | Chr5:93868823-93868842 | None:intergenic | 50.0% | |
| GACGAACCACTCCAAGTCAA+AGG | - | Chr5:93868826-93868845 | MsG0580029218.01.T01:CDS | 50.0% | |
| GACTTGGAGTGGTTCGTCTT+CGG | + | Chr5:93868824-93868843 | None:intergenic | 50.0% | |
| GGAGTTTGTGGCCTTTGACT+TGG | + | Chr5:93868840-93868859 | None:intergenic | 50.0% | |
| !! | AGAGGAAGAGTGCTGTGAAG+AGG | + | Chr5:93868894-93868913 | None:intergenic | 50.0% |
| !! | AGGAAGCTTCTTGATGGCGT+TGG | + | Chr5:93869004-93869023 | None:intergenic | 50.0% |
| !! | TTGTGGCCTTTGACTTGGAG+TGG | + | Chr5:93868835-93868854 | None:intergenic | 50.0% |
| ! | AGTGGTTCGTCTTCGGGTTC+GGG | + | Chr5:93868817-93868836 | None:intergenic | 55.0% |
| ! | GAGTGGTTCGTCTTCGGGTT+CGG | + | Chr5:93868818-93868837 | None:intergenic | 55.0% |
| !!! | GGTGGTTTTGGAAGAGCCAG+CGG | + | Chr5:93868921-93868940 | None:intergenic | 55.0% |
| !!! | GTGGTTTTGGAAGAGCCAGC+GGG | + | Chr5:93868920-93868939 | None:intergenic | 55.0% |
| ! | GTGGTTCGTCTTCGGGTTCG+GGG | + | Chr5:93868816-93868835 | None:intergenic | 60.0% |
| !! | CGTGGGGAGTGTGGTGGTTT+TGG | + | Chr5:93868933-93868952 | None:intergenic | 60.0% |
| CACTCTTCCTCTGTGCCCGC+TGG | - | Chr5:93868902-93868921 | MsG0580029218.01.T01:CDS | 65.0% | |
| GAGGTGTGAGATGGCGCGTG+GGG | + | Chr5:93868949-93868968 | None:intergenic | 65.0% | |
| ! | GGAGGTGTGAGATGGCGCGT+GGG | + | Chr5:93868950-93868969 | None:intergenic | 65.0% |
| ! | TGGAGGTGTGAGATGGCGCG+TGG | + | Chr5:93868951-93868970 | None:intergenic | 65.0% |
| !! | GGCGTTGGCGTCGAGTCCTT+CGG | + | Chr5:93868989-93869008 | None:intergenic | 65.0% |
| GAGATGGCGCGTGGGGAGTG+TGG | + | Chr5:93868942-93868961 | None:intergenic | 70.0% | |
| GGAAGAGCCAGCGGGCACAG+AGG | + | Chr5:93868912-93868931 | None:intergenic | 70.0% | |
| ! | ATGGCGCGTGGGGAGTGTGG+TGG | + | Chr5:93868939-93868958 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 93868772 | 93869176 | 93868772 | ID=MsG0580029218.01;Name=MsG0580029218.01 |
| Chr5 | mRNA | 93868772 | 93869176 | 93868772 | ID=MsG0580029218.01.T01;Parent=MsG0580029218.01;Name=MsG0580029218.01.T01;_AED=0.13;_eAED=0.16;_QI=0|-1|0|1|-1|0|1|0|134 |
| Chr5 | exon | 93868772 | 93869176 | 93868772 | ID=MsG0580029218.01.T01:exon:18189;Parent=MsG0580029218.01.T01 |
| Chr5 | CDS | 93868772 | 93869176 | 93868772 | ID=MsG0580029218.01.T01:cds;Parent=MsG0580029218.01.T01 |
| Chr5 | mRNA | 93868858 | 93868893 | 93868858 | ID=MsG0580029218.01.T02;Parent=MsG0580029218.01;Name=MsG0580029218.01.T02;_AED=0.47;_eAED=1.00;_QI=0|-1|0|1|-1|0|1|0|11 |
| Chr5 | exon | 93868858 | 93868893 | 93868858 | ID=MsG0580029218.01.T02:exon:18190;Parent=MsG0580029218.01.T02 |
| Chr5 | CDS | 93868858 | 93868893 | 93868858 | ID=MsG0580029218.01.T02:cds;Parent=MsG0580029218.01.T02 |
| Gene Sequence |
| Protein sequence |
