AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480019453.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019453.01.T01 MTR_5g072140 80.479 292 56 1 10 300 398 689 5.73e-160 470
MsG0480019453.01.T01 MTR_5g071310 84.099 283 45 0 18 300 414 696 1.85e-159 476
MsG0480019453.01.T01 MTR_5g072340 77.815 302 65 2 1 300 430 731 1.72e-156 462
MsG0480019453.01.T01 MTR_5g071470 78.477 302 62 2 1 300 429 729 4.91e-156 461
MsG0480019453.01.T01 MTR_7g071940 77.303 304 63 2 1 300 424 725 1.44e-155 460
MsG0480019453.01.T01 MTR_5g071570 75.738 305 69 2 1 300 430 734 2.50e-152 455
MsG0480019453.01.T01 MTR_5g071800 77.483 302 65 2 1 300 429 729 4.51e-152 451
MsG0480019453.01.T01 MTR_5g070490 78.405 301 61 3 1 300 429 726 9.28e-152 453
MsG0480019453.01.T01 MTR_5g072250 75.410 305 69 3 1 300 428 731 7.59e-151 444
MsG0480019453.01.T01 MTR_5g070960 75.490 306 69 3 1 300 430 735 4.93e-150 446
MsG0480019453.01.T01 MTR_5g071220 75.410 305 70 2 1 300 429 733 1.02e-148 447
MsG0480019453.01.T01 MTR_5g071220 75.410 305 70 2 1 300 429 733 1.38e-148 446
MsG0480019453.01.T01 MTR_5g070470 76.699 309 60 6 1 300 429 734 1.84e-146 443
MsG0480019453.01.T01 MTR_4g055630 73.701 308 73 3 1 300 429 736 7.99e-145 433
MsG0480019453.01.T01 MTR_5g071670 75.083 301 73 2 1 300 423 722 1.43e-144 439
MsG0480019453.01.T01 MTR_5g071670 54.167 72 30 1 232 300 1128 1199 9.31e-12 66.2
MsG0480019453.01.T01 MTR_1g022380 64.590 305 103 2 1 300 424 728 1.22e-125 382
MsG0480019453.01.T01 MTR_1g023600 66.013 306 97 4 1 300 426 730 3.16e-118 363
MsG0480019453.01.T01 MTR_5g071780 66.230 305 96 5 1 300 429 731 1.16e-116 359
MsG0480019453.01.T01 MTR_5g071823 60.984 305 112 4 1 300 429 731 2.32e-111 345
MsG0480019453.01.T01 MTR_5g071850 60.984 305 112 4 1 300 429 731 2.32e-111 345
MsG0480019453.01.T01 MTR_5g040900 54.545 308 108 6 1 300 388 671 1.84e-89 285
MsG0480019453.01.T01 MTR_6g052455 49.511 307 145 5 1 300 316 619 8.94e-84 272
MsG0480019453.01.T01 MTR_6g052760 50.974 308 140 6 1 300 425 729 9.61e-84 273
MsG0480019453.01.T01 MTR_0230s0010 49.186 307 147 5 1 300 366 670 1.07e-82 269
MsG0480019453.01.T01 MTR_6g046620 49.834 301 143 4 2 300 380 674 6.92e-81 265
MsG0480019453.01.T01 MTR_6g047450 48.852 305 149 5 1 300 423 725 4.59e-80 263
MsG0480019453.01.T01 MTR_3g086070 49.180 305 146 5 1 300 424 724 4.99e-80 263
MsG0480019453.01.T01 MTR_6g046480 48.013 302 154 3 1 300 423 723 2.68e-79 261
MsG0480019453.01.T01 MTR_0256s0050 48.355 304 149 4 1 300 395 694 1.52e-78 259
MsG0480019453.01.T01 MTR_6g046570 49.836 305 144 8 1 300 429 729 6.66e-78 257
MsG0480019453.01.T01 MTR_3g023320 48.505 301 151 4 2 300 426 724 1.82e-76 253
MsG0480019453.01.T01 MTR_0511s0020 47.231 307 135 6 1 300 425 711 6.39e-76 251
MsG0480019453.01.T01 MTR_0144s0060 47.697 304 150 6 1 300 422 720 4.06e-74 246
MsG0480019453.01.T01 MTR_0144s0060 45.455 176 94 1 109 282 969 1144 5.50e-34 131
MsG0480019453.01.T01 MTR_0133s0030 48.208 307 146 9 1 300 424 724 8.81e-74 245
MsG0480019453.01.T01 MTR_8g036195 47.387 287 145 4 18 300 425 709 3.09e-73 244
MsG0480019453.01.T01 MTR_6g046930 45.779 308 152 8 1 300 421 721 1.89e-70 236
MsG0480019453.01.T01 MTR_6g046130 48.344 302 149 5 2 300 423 720 1.84e-69 233
MsG0480019453.01.T01 MTR_0133s0020 43.949 314 159 7 1 300 422 732 1.92e-69 233
MsG0480019453.01.T01 MTR_6g046450 45.130 308 145 9 1 300 473 764 4.79e-66 224
MsG0480019453.01.T01 MTR_4g126000 56.995 193 83 0 108 300 401 593 1.81e-59 204
MsG0480019453.01.T01 MTR_5g040770 41.830 306 170 6 2 300 200 504 2.60e-58 200
MsG0480019453.01.T01 MTR_5g037460 39.048 315 168 7 2 300 296 602 9.43e-56 193
MsG0480019453.01.T01 MTR_5g039570 55.172 203 55 4 102 300 332 502 1.97e-54 186
MsG0480019453.01.T01 MTR_3g026660 37.037 351 160 8 2 300 435 776 3.86e-54 190
MsG0480019453.01.T01 MTR_5g035480 39.535 301 177 4 2 300 424 721 1.21e-53 188
MsG0480019453.01.T01 MTR_5g037450 39.365 315 167 7 2 300 439 745 1.89e-52 185
MsG0480019453.01.T01 MTR_5g035240 43.042 309 151 10 5 300 437 733 3.73e-52 184
MsG0480019453.01.T01 MTR_5g035530 39.610 308 176 6 2 300 314 620 8.50e-52 183
MsG0480019453.01.T01 MTR_5g034770 40.924 303 170 7 2 300 419 716 1.02e-51 182
MsG0480019453.01.T01 MTR_6g046440 40.132 304 119 8 1 300 424 668 1.32e-51 182
MsG0480019453.01.T01 MTR_3g026660 35.952 331 152 7 21 300 398 719 3.34e-48 172
MsG0480019453.01.T01 MTR_5g035280 37.942 311 171 8 2 300 435 735 4.78e-48 172
MsG0480019453.01.T01 MTR_3g022790 34.700 317 184 9 2 300 435 746 1.03e-37 142
MsG0480019453.01.T01 MTR_3g463180 59.055 127 47 1 99 225 367 488 1.62e-37 139
MsG0480019453.01.T01 MTR_5g071450 62.963 108 39 1 10 116 230 337 5.05e-37 135
MsG0480019453.01.T01 MTR_2g063777 33.123 317 185 12 2 300 441 748 2.58e-36 138
MsG0480019453.01.T01 MTR_5g037500 36.713 286 163 7 23 300 398 673 3.81e-36 137
MsG0480019453.01.T01 MTR_3g034460 34.906 318 181 11 2 300 425 735 5.80e-36 137
MsG0480019453.01.T01 MTR_3g035480 34.462 325 174 11 2 300 441 752 7.40e-36 137
MsG0480019453.01.T01 MTR_3g030960 32.288 319 188 10 2 300 441 751 7.87e-36 137
MsG0480019453.01.T01 MTR_0002s0120 34.462 325 174 11 2 300 224 535 9.04e-36 136
MsG0480019453.01.T01 MTR_3g033860 34.688 320 179 12 2 300 441 751 9.59e-36 137
MsG0480019453.01.T01 MTR_3g032200 32.278 316 191 12 2 300 445 754 9.99e-36 136
MsG0480019453.01.T01 MTR_3g034430 34.277 318 183 11 2 300 441 751 1.21e-35 136
MsG0480019453.01.T01 MTR_0002s0110 34.462 325 174 11 2 300 441 752 1.27e-35 136
MsG0480019453.01.T01 MTR_3g031940 31.646 316 193 12 2 300 445 754 1.41e-35 136
MsG0480019453.01.T01 MTR_3g028040 34.062 320 181 10 2 300 441 751 1.46e-35 136
MsG0480019453.01.T01 MTR_3g035940 34.462 325 174 11 2 300 441 752 1.60e-35 136
MsG0480019453.01.T01 MTR_3g030980 32.602 319 187 10 2 300 441 751 1.92e-35 135
MsG0480019453.01.T01 MTR_3g035960 34.365 323 175 10 2 300 441 750 3.13e-35 135
MsG0480019453.01.T01 MTR_2g014840 37.086 302 167 10 2 286 437 732 3.25e-35 135
MsG0480019453.01.T01 MTR_4g021690 33.230 322 186 12 2 298 428 745 4.48e-35 134
MsG0480019453.01.T01 MTR_4g022480 33.013 312 172 12 2 283 427 731 8.64e-35 134
MsG0480019453.01.T01 MTR_4g022540 33.333 309 174 10 2 284 427 729 9.41e-35 134
MsG0480019453.01.T01 MTR_2g078070 35.548 301 170 11 2 284 442 736 9.59e-35 134
MsG0480019453.01.T01 MTR_3g034380 32.808 317 188 10 2 300 441 750 1.21e-34 133
MsG0480019453.01.T01 MTR_8g030860 33.754 317 185 12 2 300 448 757 2.53e-34 132
MsG0480019453.01.T01 MTR_3g018980 33.962 318 184 9 2 300 442 752 2.78e-34 132
MsG0480019453.01.T01 MTR_3g032760 33.019 318 187 14 2 300 441 751 3.46e-34 132
MsG0480019453.01.T01 MTR_3g018980 33.962 318 184 9 2 300 442 752 4.72e-34 132
MsG0480019453.01.T01 MTR_4g022560 33.117 308 179 9 2 283 427 733 4.79e-34 132
MsG0480019453.01.T01 MTR_4g022460 33.548 310 167 12 5 283 431 732 5.65e-34 131
MsG0480019453.01.T01 MTR_3g024460 33.230 322 183 9 2 300 44 356 1.62e-33 130
MsG0480019453.01.T01 MTR_3g032800 31.447 318 192 12 2 300 441 751 1.63e-33 130
MsG0480019453.01.T01 MTR_3g020890 33.866 313 182 9 2 296 432 737 1.63e-33 130
MsG0480019453.01.T01 MTR_5g095910 36.709 316 167 14 2 295 440 744 1.84e-33 130
MsG0480019453.01.T01 MTR_3g027420 34.884 301 176 8 2 284 426 724 2.34e-33 129
MsG0480019453.01.T01 MTR_3g032500 32.492 317 190 14 2 300 445 755 2.78e-33 129
MsG0480019453.01.T01 MTR_6g084550 31.962 316 193 10 2 300 426 736 4.27e-33 129
MsG0480019453.01.T01 MTR_7g078790 34.069 317 185 12 2 300 428 738 6.93e-33 128
MsG0480019453.01.T01 MTR_3g033080 32.399 321 189 12 2 300 440 754 2.17e-32 127
MsG0480019453.01.T01 MTR_3g033380 31.366 322 187 11 2 300 445 755 2.24e-32 127
MsG0480019453.01.T01 MTR_4g050790 32.558 301 185 10 2 288 426 722 6.64e-32 125
MsG0480019453.01.T01 MTR_3g018930 34.680 297 167 10 2 279 444 732 7.48e-32 125
MsG0480019453.01.T01 MTR_8g038590 32.508 323 185 10 2 300 448 761 7.77e-32 125
MsG0480019453.01.T01 MTR_3g015550 32.890 301 184 11 2 288 426 722 7.98e-32 125
MsG0480019453.01.T01 MTR_3g015550 32.890 301 184 11 2 288 463 759 8.34e-32 125
MsG0480019453.01.T01 MTR_6g016430 35.238 315 187 9 2 300 435 748 9.00e-32 125
MsG0480019453.01.T01 MTR_3g032370 31.034 319 192 11 2 300 439 749 9.62e-32 125
MsG0480019453.01.T01 MTR_8g038570 33.540 322 186 9 2 300 452 768 1.08e-31 125
MsG0480019453.01.T01 MTR_3g018930 34.680 297 167 10 2 279 444 732 1.08e-31 125
MsG0480019453.01.T01 MTR_2g014720 33.648 318 161 13 2 296 343 633 1.10e-31 125
MsG0480019453.01.T01 MTR_3g032150 31.034 319 192 11 2 300 439 749 1.27e-31 124
MsG0480019453.01.T01 MTR_3g435720 32.492 317 190 13 2 300 441 751 1.58e-31 124
MsG0480019453.01.T01 MTR_3g032960 31.861 317 192 12 2 300 441 751 1.70e-31 124
MsG0480019453.01.T01 MTR_3g071130 30.247 324 186 9 2 300 426 734 2.89e-31 124
MsG0480019453.01.T01 MTR_4g050410 30.284 317 196 10 2 300 440 749 3.12e-31 123
MsG0480019453.01.T01 MTR_0002s0090 34.251 327 171 13 2 300 441 751 4.10e-31 123
MsG0480019453.01.T01 MTR_3g035500 34.251 327 171 13 2 300 441 751 4.10e-31 123
MsG0480019453.01.T01 MTR_3g027250 33.542 319 186 10 2 300 427 739 4.44e-31 123
MsG0480019453.01.T01 MTR_3g071070 30.247 324 186 9 2 300 221 529 4.54e-31 123
MsG0480019453.01.T01 MTR_3g023030 34.740 308 167 10 2 288 445 739 5.11e-31 123
MsG0480019453.01.T01 MTR_0425s0020 33.435 329 179 12 2 300 443 761 8.14e-31 122
MsG0480019453.01.T01 MTR_3g015280 32.248 307 190 12 2 294 426 728 1.98e-30 121
MsG0480019453.01.T01 MTR_8g106550 32.609 322 187 12 2 300 373 687 2.50e-30 120
MsG0480019453.01.T01 MTR_3g022230 35.312 320 172 13 2 300 443 748 4.44e-30 120
MsG0480019453.01.T01 MTR_3g435740 31.230 317 194 12 2 300 485 795 5.65e-30 120
MsG0480019453.01.T01 MTR_3g015560 35.526 304 171 13 2 288 426 721 5.95e-30 119
MsG0480019453.01.T01 MTR_3g033240 30.341 323 189 12 2 300 444 754 6.48e-30 119
MsG0480019453.01.T01 MTR_3g014080 32.468 308 178 9 2 283 439 742 1.53e-29 119
MsG0480019453.01.T01 MTR_3g014080 32.468 308 178 9 2 283 439 742 1.56e-29 119
MsG0480019453.01.T01 MTR_3g015500 32.975 279 171 10 2 268 464 738 1.84e-29 118
MsG0480019453.01.T01 MTR_3g022400 31.699 306 182 8 2 285 418 718 1.84e-29 118
MsG0480019453.01.T01 MTR_3g022400 31.699 306 182 8 2 285 418 718 1.92e-29 118
MsG0480019453.01.T01 MTR_3g015260 32.492 317 189 10 2 300 444 753 2.17e-29 118
MsG0480019453.01.T01 MTR_3g015260 32.492 317 189 10 2 300 444 753 2.35e-29 118
MsG0480019453.01.T01 MTR_3g021340 30.744 309 175 7 2 283 425 721 2.36e-29 118
MsG0480019453.01.T01 MTR_1g008240 33.019 318 184 12 2 300 426 733 2.63e-29 118
MsG0480019453.01.T01 MTR_3g021380 31.385 325 189 8 2 298 413 731 3.16e-29 117
MsG0480019453.01.T01 MTR_3g019040 32.166 314 190 9 2 298 442 749 4.10e-29 117
MsG0480019453.01.T01 MTR_3g036050 31.447 318 191 10 2 300 53 362 4.33e-29 117
MsG0480019453.01.T01 MTR_3g035810 31.250 320 194 8 2 300 407 721 4.85e-29 117
MsG0480019453.01.T01 MTR_0005s0200 29.968 317 197 9 2 300 457 766 5.40e-29 117
MsG0480019453.01.T01 MTR_3g022300 33.537 328 177 11 2 300 443 758 1.07e-28 116
MsG0480019453.01.T01 MTR_3g070590 28.834 326 188 9 2 300 426 734 2.06e-28 115
MsG0480019453.01.T01 MTR_3g022940 31.908 304 180 8 2 283 421 719 2.41e-28 115
MsG0480019453.01.T01 MTR_3g021400 32.459 305 175 9 4 283 413 711 2.67e-28 115
MsG0480019453.01.T01 MTR_8g446950 31.879 298 175 10 5 283 470 758 2.81e-28 115
MsG0480019453.01.T01 MTR_3g021100 32.515 326 187 10 2 300 429 748 3.03e-28 115
MsG0480019453.01.T01 MTR_3g022600 32.635 334 182 13 2 300 443 768 4.83e-28 114
MsG0480019453.01.T01 MTR_1g047800 33.221 298 179 8 2 284 434 726 6.31e-28 114
MsG0480019453.01.T01 MTR_7g021000 30.031 323 167 8 2 284 428 731 4.75e-27 111
MsG0480019453.01.T01 MTR_3g021170 32.131 305 178 8 2 283 424 722 5.75e-27 111
MsG0480019453.01.T01 MTR_3g025360 31.561 301 185 8 2 283 450 748 5.80e-27 111
MsG0480019453.01.T01 MTR_3g014510 30.488 328 186 12 2 300 441 755 5.88e-27 111
MsG0480019453.01.T01 MTR_3g027200 33.025 324 183 10 2 300 443 757 6.60e-27 111
MsG0480019453.01.T01 MTR_7g021000 30.031 323 167 8 2 284 428 731 6.94e-27 110
MsG0480019453.01.T01 MTR_3g014320 30.476 315 187 12 2 293 441 746 9.75e-27 110
MsG0480019453.01.T01 MTR_3g014390 30.645 310 185 11 2 289 439 740 1.17e-26 110
MsG0480019453.01.T01 MTR_3g032340 27.824 363 192 13 2 300 446 802 1.28e-26 110
MsG0480019453.01.T01 MTR_3g022130 34.783 299 162 8 2 279 417 703 1.34e-26 110
MsG0480019453.01.T01 MTR_3g022570 32.399 321 189 11 2 300 464 778 1.51e-26 110
MsG0480019453.01.T01 MTR_0083s0120 31.208 298 179 13 21 300 11 300 1.72e-26 109
MsG0480019453.01.T01 MTR_3g033110 29.114 316 182 10 2 300 440 730 1.83e-26 109
MsG0480019453.01.T01 MTR_2g038900 30.960 323 192 9 2 300 441 756 1.99e-26 109
MsG0480019453.01.T01 MTR_2g038930 30.960 323 192 9 2 300 278 593 3.00e-26 108
MsG0480019453.01.T01 MTR_8g445980 32.549 255 142 5 2 229 441 692 3.80e-26 108
MsG0480019453.01.T01 MTR_3g014040 32.432 296 178 10 2 285 444 729 4.06e-26 108
MsG0480019453.01.T01 MTR_1g037610 31.847 314 181 12 2 291 441 745 4.35e-26 108
MsG0480019453.01.T01 MTR_3g022920 31.475 305 180 8 2 283 414 712 5.83e-26 108
MsG0480019453.01.T01 MTR_3g034650 31.561 301 149 12 2 300 28 273 9.48e-26 107
MsG0480019453.01.T01 MTR_3g014360 30.159 315 188 13 2 293 426 731 2.40e-25 106
MsG0480019453.01.T01 MTR_6g016420 33.663 303 166 11 2 283 420 708 2.86e-25 106
MsG0480019453.01.T01 MTR_3g032110 26.849 365 194 12 2 300 442 799 3.31e-25 106
MsG0480019453.01.T01 MTR_6g016420 33.663 303 166 11 2 283 420 708 3.48e-25 105
MsG0480019453.01.T01 MTR_2g038760 30.960 323 192 9 2 300 452 767 6.14e-25 105
MsG0480019453.01.T01 MTR_3g027470 31.464 321 185 11 2 298 352 661 1.69e-24 103
MsG0480019453.01.T01 MTR_4g022960 31.970 269 160 10 22 283 424 676 2.35e-24 103
MsG0480019453.01.T01 MTR_7g089080 32.581 310 176 9 2 295 779 1071 5.08e-24 102
MsG0480019453.01.T01 MTR_0137s0010 30.903 288 170 9 22 285 1 283 5.58e-24 102
MsG0480019453.01.T01 MTR_3g022060 34.237 295 155 11 2 279 344 616 7.43e-24 102
MsG0480019453.01.T01 MTR_8g011320 36.330 267 138 12 2 248 366 620 1.54e-23 101
MsG0480019453.01.T01 MTR_2g039090 30.581 327 188 9 2 300 425 740 1.63e-23 101
MsG0480019453.01.T01 MTR_3g022870 30.581 327 188 11 2 300 425 740 2.84e-23 100
MsG0480019453.01.T01 MTR_1g045960 31.173 324 179 14 2 300 414 718 7.37e-22 96.3
MsG0480019453.01.T01 MTR_2g014730 32.063 315 155 13 2 295 416 692 1.16e-21 95.9
MsG0480019453.01.T01 MTR_8g010440 33.096 281 155 12 2 263 436 702 1.54e-21 95.1
MsG0480019453.01.T01 MTR_0603s0010 28.763 299 181 9 6 283 508 795 2.88e-21 94.7
MsG0480019453.01.T01 MTR_3g014470 29.154 319 178 13 2 297 406 699 4.14e-21 94.0
MsG0480019453.01.T01 MTR_7g013560 34.061 229 111 8 2 210 439 647 4.74e-21 94.0
MsG0480019453.01.T01 MTR_3g019000 30.060 336 181 11 1 300 434 751 1.27e-20 92.8
MsG0480019453.01.T01 MTR_5g037590 29.097 299 181 9 2 283 408 692 1.36e-20 92.4
MsG0480019453.01.T01 MTR_8g039260 29.703 303 161 8 20 300 1 273 1.45e-20 92.0
MsG0480019453.01.T01 MTR_5g028420 31.366 322 192 9 3 299 405 722 1.56e-20 92.4
MsG0480019453.01.T01 MTR_7g022290 33.803 213 116 7 2 205 60 256 2.45e-20 91.3
MsG0480019453.01.T01 MTR_3g033130 29.870 308 169 12 2 300 426 695 2.94e-20 91.7
MsG0480019453.01.T01 MTR_3g022870 29.221 308 181 10 2 300 425 704 4.86e-20 90.9
MsG0480019453.01.T01 MTR_5g028750 30.745 322 178 14 3 285 382 697 7.79e-20 90.1
MsG0480019453.01.T01 MTR_8g011280 37.220 223 110 10 1 204 302 513 9.15e-20 90.1
MsG0480019453.01.T01 MTR_5g028610 28.391 317 183 9 3 288 406 709 1.51e-19 89.4
MsG0480019453.01.T01 MTR_5g028340 29.907 321 186 11 3 288 400 716 2.66e-19 88.6
MsG0480019453.01.T01 MTR_8g011590 31.518 257 143 10 2 249 322 554 4.55e-19 87.8
MsG0480019453.01.T01 MTR_0267s0070 30.693 303 181 9 2 283 448 742 9.20e-19 87.4
MsG0480019453.01.T01 MTR_0137s0070 42.754 138 76 3 148 283 24 160 1.40e-18 86.3
MsG0480019453.01.T01 MTR_0065s0100 35.185 216 105 11 2 205 440 632 1.56e-18 86.3
MsG0480019453.01.T01 MTR_0137s0070 42.754 138 76 3 148 283 24 160 1.63e-18 86.3
MsG0480019453.01.T01 MTR_6g452490 35.160 219 115 10 2 204 436 643 3.26e-18 85.5
MsG0480019453.01.T01 MTR_3g020620 30.938 320 187 11 2 300 592 898 5.52e-18 84.7
MsG0480019453.01.T01 MTR_3g435220 31.329 316 181 12 2 296 404 704 5.73e-18 84.7
MsG0480019453.01.T01 MTR_3g435210 29.236 301 168 11 2 283 249 523 6.90e-18 84.3
MsG0480019453.01.T01 MTR_5g035300 60.000 65 25 1 2 65 435 499 7.39e-18 84.0
MsG0480019453.01.T01 MTR_8g011300 34.703 219 116 10 2 204 435 642 1.10e-17 84.0
MsG0480019453.01.T01 MTR_5g028290 29.283 321 188 13 3 288 427 743 1.56e-17 83.6
MsG0480019453.01.T01 MTR_4g019360 27.723 303 178 11 8 283 369 657 1.63e-17 83.6
MsG0480019453.01.T01 MTR_3g011620 29.508 305 182 10 2 283 445 739 2.49e-17 82.8
MsG0480019453.01.T01 MTR_8g027540 35.648 216 118 10 2 204 438 645 2.70e-17 82.8
MsG0480019453.01.T01 MTR_3g023030 41.727 139 76 3 152 288 570 705 3.41e-17 82.4
MsG0480019453.01.T01 MTR_5g028070 27.586 319 199 11 3 293 549 863 3.75e-17 82.4
MsG0480019453.01.T01 MTR_7g078300 35.021 237 123 12 8 228 452 673 3.95e-17 82.0
MsG0480019453.01.T01 MTR_2g039040 30.709 254 145 9 2 231 313 559 4.09e-17 82.0
MsG0480019453.01.T01 MTR_8g011850 31.905 210 113 4 2 204 1487 1673 9.59e-17 81.3
MsG0480019453.01.T01 MTR_8g037220 30.000 230 139 4 2 228 1213 1423 1.05e-16 81.3
MsG0480019453.01.T01 MTR_8g037220 28.916 249 155 4 2 247 1434 1663 1.06e-16 81.3
MsG0480019453.01.T01 MTR_1g030770 32.353 238 133 11 2 228 438 658 1.45e-16 80.5
MsG0480019453.01.T01 MTR_1g078490 32.068 237 134 8 6 228 443 666 2.00e-16 80.1
MsG0480019453.01.T01 MTR_3g022740 28.517 263 149 9 55 300 211 451 7.97e-16 78.2
MsG0480019453.01.T01 MTR_7g091140 27.679 224 139 6 8 228 463 666 1.31e-15 77.8
MsG0480019453.01.T01 MTR_0005s0230 28.980 245 137 10 2 227 251 477 1.54e-15 77.0
MsG0480019453.01.T01 MTR_7g091550 28.137 263 145 10 4 229 458 713 2.12e-15 77.0
MsG0480019453.01.T01 MTR_5g035450 30.172 232 147 6 55 284 1 219 3.07e-15 75.9
MsG0480019453.01.T01 MTR_4g037045 48.315 89 29 2 229 300 89 177 6.86e-15 72.4
MsG0480019453.01.T01 MTR_8g011180 28.333 240 122 8 2 236 438 632 8.83e-15 75.1
MsG0480019453.01.T01 MTR_2g062360 26.754 228 144 6 4 228 210 417 9.98e-15 74.7
MsG0480019453.01.T01 MTR_8g011170 30.672 238 120 9 2 236 424 619 1.83e-14 74.3
MsG0480019453.01.T01 MTR_8g011550 33.971 209 97 9 2 199 439 617 1.85e-14 74.3
MsG0480019453.01.T01 MTR_5g076840 30.806 211 123 5 18 228 469 656 1.72e-13 71.2
MsG0480019453.01.T01 MTR_3g069210 29.104 268 156 11 3 247 445 701 2.65e-13 70.9
MsG0480019453.01.T01 MTR_1g047910 31.818 220 131 10 4 210 457 670 2.88e-13 70.5
MsG0480019453.01.T01 MTR_4g119195 30.942 223 129 6 8 228 455 654 3.60e-13 70.1
MsG0480019453.01.T01 MTR_4g119195 30.942 223 129 6 8 228 455 654 5.42e-13 69.7
MsG0480019453.01.T01 MTR_3g018970 39.474 152 87 4 152 300 57 206 1.74e-12 67.8
MsG0480019453.01.T01 MTR_4g094540 27.881 269 153 10 4 257 453 695 2.12e-12 67.8
MsG0480019453.01.T01 MTR_4g022950 35.156 128 75 4 164 283 10 137 2.99e-12 67.0
MsG0480019453.01.T01 MTR_0144s0010 58.462 65 24 1 239 300 5 69 4.13e-12 66.6
MsG0480019453.01.T01 MTR_7g084790 29.787 235 130 12 3 208 204 432 4.96e-12 66.6
MsG0480019453.01.T01 MTR_5g035230 54.237 59 26 1 2 59 413 471 5.47e-12 66.2
MsG0480019453.01.T01 MTR_8g011600 30.594 219 113 10 2 205 272 466 9.31e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480019453.01.T01 AT3G14460 34.323 303 169 10 2 283 436 729 1.87e-30 121
MsG0480019453.01.T01 AT3G14470 28.618 304 183 10 2 283 444 735 3.01e-27 112
MsG0480019453.01.T01 AT3G14470 28.618 304 183 10 2 283 444 735 3.01e-27 112

Find 50 sgRNAs with CRISPR-Local

Find 62 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCAACTTACATTTCTCTT+AGG 0.209482 4:-20576975 MsG0480019453.01.T01:CDS
ATTCAACTTTGGATGGATAA+TGG 0.262775 4:-20577339 MsG0480019453.01.T01:CDS
TGTAAGCAAGCCAAGTGTTT+TGG 0.262960 4:+20576787 None:intergenic
GGGGCAAGAATGTATGTATT+TGG 0.295576 4:-20577154 MsG0480019453.01.T01:CDS
TAGGTAGTTTAATTCATTTA+AGG 0.315262 4:-20576918 MsG0480019453.01.T01:CDS
AATTTAGAGGTTGAAGATGT+TGG 0.373707 4:-20577300 MsG0480019453.01.T01:CDS
GATCTCGCTCAATCAGTAAT+GGG 0.378875 4:-20577174 MsG0480019453.01.T01:CDS
TATTGCAAAGAGGAATTTAG+AGG 0.387795 4:-20577313 MsG0480019453.01.T01:CDS
CCCAACTTACATTTCTCTTA+GGG 0.397029 4:-20576974 MsG0480019453.01.T01:CDS
TGTAAGTTGTAAATTGAGTC+AGG 0.402367 4:+20576859 None:intergenic
ATCAAGATGGATGAATATTC+TGG 0.403588 4:-20577231 MsG0480019453.01.T01:CDS
TAGTAATGGACCCCGGATAA+AGG 0.403997 4:+20576939 None:intergenic
AAAAGATGTTCGCAGTTTAT+CGG 0.404887 4:-20576587 MsG0480019453.01.T01:CDS
TTTATCCGGGGTCCATTACT+AGG 0.412044 4:-20576937 MsG0480019453.01.T01:CDS
ACCCTAAGAGAAATGTAAGT+TGG 0.420204 4:+20576973 None:intergenic
CCCTAAGAGAAATGTAAGTT+GGG 0.433256 4:+20576974 None:intergenic
AGGAAGAATTGATTCAACTT+TGG 0.438420 4:-20577350 MsG0480019453.01.T01:CDS
AAGATGTTGGAAACAAGGTT+TGG 0.457975 4:-20577287 MsG0480019453.01.T01:CDS
TCTCGAATGTTTCCGAACAT+TGG 0.460184 4:-20576724 MsG0480019453.01.T01:CDS
AGAATTGATTCAACTTTGGA+TGG 0.464520 4:-20577346 MsG0480019453.01.T01:CDS
AGCTCAAGAAGCCAATTTGA+TGG 0.476504 4:-20576563 MsG0480019453.01.T01:CDS
CCCATGACAAGCATAATTGT+TGG 0.480498 4:+20576527 None:intergenic
TTTATGCACAACCTTTATCC+GGG 0.487943 4:-20576950 MsG0480019453.01.T01:CDS
TTACTGATTGAGCGAGATCA+TGG 0.494813 4:+20577178 None:intergenic
GGTTGAAGATGTTGGAAACA+AGG 0.506146 4:-20577292 MsG0480019453.01.T01:CDS
TGATCTCGCTCAATCAGTAA+TGG 0.513596 4:-20577175 MsG0480019453.01.T01:CDS
TGTTGGAAACAAGGTTTGGA+AGG 0.524543 4:-20577283 MsG0480019453.01.T01:CDS
ATGACAAGCATAATTGTTGG+AGG 0.526511 4:+20576530 None:intergenic
TCCAACAATTATGCTTGTCA+TGG 0.530375 4:-20576528 MsG0480019453.01.T01:CDS
CCAACAATTATGCTTGTCAT+GGG 0.533663 4:-20576527 MsG0480019453.01.T01:CDS
TGAATTAAACTACCTAGTAA+TGG 0.539891 4:+20576925 None:intergenic
GCTCAAGAAGCCAATTTGAT+GGG 0.547159 4:-20576562 MsG0480019453.01.T01:CDS
ATTCTTTCAAGACATCAAGA+TGG 0.547620 4:-20577244 MsG0480019453.01.T01:CDS
CAACTGAAACAATGTTCGCA+AGG 0.572285 4:+20577029 None:intergenic
GGTGGAAAACTGAGTATCAA+AGG 0.592928 4:-20576613 MsG0480019453.01.T01:CDS
GAGTTGTCTCCCAAAACACT+TGG 0.603745 4:-20576797 MsG0480019453.01.T01:CDS
ATAATGGATTTATTGCAAAG+AGG 0.615145 4:-20577323 MsG0480019453.01.T01:CDS
TAGATCACGTAACTCTGTCA+AGG 0.629871 4:+20576642 None:intergenic
ATGCTTGTCATGGGGATACG+AGG 0.645330 4:-20576518 MsG0480019453.01.T01:CDS
ATCTCGCTCAATCAGTAATG+GGG 0.648070 4:-20577173 MsG0480019453.01.T01:CDS
TTATGCACAACCTTTATCCG+GGG 0.652700 4:-20576949 MsG0480019453.01.T01:CDS
CATCGAATGATAACAAGTCG+TGG 0.655424 4:+20577076 None:intergenic
CTTGTCATGGGGATACGAGG+AGG 0.662826 4:-20576515 MsG0480019453.01.T01:CDS
AACTACCTAGTAATGGACCC+CGG 0.673284 4:+20576932 None:intergenic
CAACAATTATGCTTGTCATG+GGG 0.680726 4:-20576526 MsG0480019453.01.T01:CDS
ACCTTGAAAATAAATCATTG+TGG 0.682821 4:-20576826 MsG0480019453.01.T01:CDS
GAGTTACGTGATCTAAACCT+CGG 0.691501 4:-20576634 MsG0480019453.01.T01:CDS
CGAATGATAACAAGTCGTGG+TGG 0.714921 4:+20577079 None:intergenic
TTACGTGATCTAAACCTCGG+TGG 0.718994 4:-20576631 MsG0480019453.01.T01:CDS
CGTGGTGGTCAAAACCAATG+TGG 0.754946 4:+20577094 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTACAACTTACAAAAAC+TGG - Chr4:20576977-20576996 MsG0480019453.01.T01:CDS 20.0%
!! TAGGTAGTTTAATTCATTTA+AGG - Chr4:20576910-20576929 MsG0480019453.01.T01:CDS 20.0%
! ACCTTGAAAATAAATCATTG+TGG - Chr4:20577002-20577021 MsG0480019453.01.T01:CDS 25.0%
! TGAATTAAACTACCTAGTAA+TGG + Chr4:20576906-20576925 None:intergenic 25.0%
!! CAAGATAATTTTCCAATGTT+CGG + Chr4:20577119-20577138 None:intergenic 25.0%
!! GAAGTAATCATGTTTTTCTA+GGG + Chr4:20576835-20576854 None:intergenic 25.0%
!! TGTCTTGAAAGAATGATTTT+TGG + Chr4:20576578-20576597 None:intergenic 25.0%
!!! ACATTGTTAGTTTTGAGAAA+TGG - Chr4:20577159-20577178 MsG0480019453.01.T01:CDS 25.0%
!!! ACCACAATGATTTATTTTCA+AGG + Chr4:20577006-20577025 None:intergenic 25.0%
!!! ATAATGGATTTATTGCAAAG+AGG - Chr4:20576505-20576524 MsG0480019453.01.T01:CDS 25.0%
AAAAGATGTTCGCAGTTTAT+CGG - Chr4:20577241-20577260 MsG0480019453.01.T01:CDS 30.0%
AATTTAGAGGTTGAAGATGT+TGG - Chr4:20576528-20576547 MsG0480019453.01.T01:CDS 30.0%
ATCAAGATGGATGAATATTC+TGG - Chr4:20576597-20576616 MsG0480019453.01.T01:CDS 30.0%
ATTCAACTTTGGATGGATAA+TGG - Chr4:20576489-20576508 MsG0480019453.01.T01:CDS 30.0%
ATTCTTTCAAGACATCAAGA+TGG - Chr4:20576584-20576603 MsG0480019453.01.T01:CDS 30.0%
TATTGCAAAGAGGAATTTAG+AGG - Chr4:20576515-20576534 MsG0480019453.01.T01:CDS 30.0%
TGTAAGTTGTAAATTGAGTC+AGG + Chr4:20576972-20576991 None:intergenic 30.0%
! AGAATTGATTCAACTTTGGA+TGG - Chr4:20576482-20576501 MsG0480019453.01.T01:CDS 30.0%
! AGGAAGAATTGATTCAACTT+TGG - Chr4:20576478-20576497 MsG0480019453.01.T01:CDS 30.0%
! GGAAGTAATCATGTTTTTCT+AGG + Chr4:20576836-20576855 None:intergenic 30.0%
! TTTTATGCACAACCTTTATC+CGG - Chr4:20576877-20576896 MsG0480019453.01.T01:CDS 30.0%
!!! GTTTTTTTTGCCCATCAAAT+TGG + Chr4:20577279-20577298 None:intergenic 30.0%
AAGATGTTGGAAACAAGGTT+TGG - Chr4:20576541-20576560 MsG0480019453.01.T01:CDS 35.0%
ACCCTAAGAGAAATGTAAGT+TGG + Chr4:20576858-20576877 None:intergenic 35.0%
ATGACAAGCATAATTGTTGG+AGG + Chr4:20577301-20577320 None:intergenic 35.0%
CAACAATTATGCTTGTCATG+GGG - Chr4:20577302-20577321 MsG0480019453.01.T01:CDS 35.0%
CCAACAATTATGCTTGTCAT+GGG - Chr4:20577301-20577320 MsG0480019453.01.T01:CDS 35.0%
CCCAACTTACATTTCTCTTA+GGG - Chr4:20576854-20576873 MsG0480019453.01.T01:CDS 35.0%
CCCTAAGAGAAATGTAAGTT+GGG + Chr4:20576857-20576876 None:intergenic 35.0%
TCCAACAATTATGCTTGTCA+TGG - Chr4:20577300-20577319 MsG0480019453.01.T01:CDS 35.0%
TCCCAACTTACATTTCTCTT+AGG - Chr4:20576853-20576872 MsG0480019453.01.T01:CDS 35.0%
TTTATGCACAACCTTTATCC+GGG - Chr4:20576878-20576897 MsG0480019453.01.T01:CDS 35.0%
AGCTCAAGAAGCCAATTTGA+TGG - Chr4:20577265-20577284 MsG0480019453.01.T01:CDS 40.0%
ATCTCGCTCAATCAGTAATG+GGG - Chr4:20576655-20576674 MsG0480019453.01.T01:CDS 40.0%
CAACTGAAACAATGTTCGCA+AGG + Chr4:20576802-20576821 None:intergenic 40.0%
CATCGAATGATAACAAGTCG+TGG + Chr4:20576755-20576774 None:intergenic 40.0%
CCCATGACAAGCATAATTGT+TGG + Chr4:20577304-20577323 None:intergenic 40.0%
GAGTTACGTGATCTAAACCT+CGG - Chr4:20577194-20577213 MsG0480019453.01.T01:CDS 40.0%
GATCTCGCTCAATCAGTAAT+GGG - Chr4:20576654-20576673 MsG0480019453.01.T01:CDS 40.0%
GCTCAAGAAGCCAATTTGAT+GGG - Chr4:20577266-20577285 MsG0480019453.01.T01:CDS 40.0%
GGGGCAAGAATGTATGTATT+TGG - Chr4:20576674-20576693 MsG0480019453.01.T01:CDS 40.0%
GGTGGAAAACTGAGTATCAA+AGG - Chr4:20577215-20577234 MsG0480019453.01.T01:CDS 40.0%
GGTTGAAGATGTTGGAAACA+AGG - Chr4:20576536-20576555 MsG0480019453.01.T01:CDS 40.0%
TAGATCACGTAACTCTGTCA+AGG + Chr4:20577189-20577208 None:intergenic 40.0%
TCTCGAATGTTTCCGAACAT+TGG - Chr4:20577104-20577123 MsG0480019453.01.T01:CDS 40.0%
TGATCTCGCTCAATCAGTAA+TGG - Chr4:20576653-20576672 MsG0480019453.01.T01:CDS 40.0%
TGTTGGAAACAAGGTTTGGA+AGG - Chr4:20576545-20576564 MsG0480019453.01.T01:CDS 40.0%
TTATGCACAACCTTTATCCG+GGG - Chr4:20576879-20576898 MsG0480019453.01.T01:CDS 40.0%
! GTAAGCAAGCCAAGTGTTTT+GGG + Chr4:20577043-20577062 None:intergenic 40.0%
! TCAAAAAGCACACACCACAT+TGG - Chr4:20576720-20576739 MsG0480019453.01.T01:CDS 40.0%
! TGTAAGCAAGCCAAGTGTTT+TGG + Chr4:20577044-20577063 None:intergenic 40.0%
! TTACTGATTGAGCGAGATCA+TGG + Chr4:20576653-20576672 None:intergenic 40.0%
CGAATGATAACAAGTCGTGG+TGG + Chr4:20576752-20576771 None:intergenic 45.0%
GAGTTGTCTCCCAAAACACT+TGG - Chr4:20577031-20577050 MsG0480019453.01.T01:CDS 45.0%
TTACGTGATCTAAACCTCGG+TGG - Chr4:20577197-20577216 MsG0480019453.01.T01:CDS 45.0%
TTTATCCGGGGTCCATTACT+AGG - Chr4:20576891-20576910 MsG0480019453.01.T01:CDS 45.0%
! TGATACTCAGTTTTCCACCG+AGG + Chr4:20577214-20577233 None:intergenic 45.0%
!! AACTACCTAGTAATGGACCC+CGG + Chr4:20576899-20576918 None:intergenic 45.0%
!! TAGTAATGGACCCCGGATAA+AGG + Chr4:20576892-20576911 None:intergenic 45.0%
ATGCTTGTCATGGGGATACG+AGG - Chr4:20577310-20577329 MsG0480019453.01.T01:CDS 50.0%
CGTGGTGGTCAAAACCAATG+TGG + Chr4:20576737-20576756 None:intergenic 50.0%
CTTGTCATGGGGATACGAGG+AGG - Chr4:20577313-20577332 MsG0480019453.01.T01:CDS 55.0%
Chromosome Type Strat End Strand Name
Chr4 gene 20576474 20577376 20576474 ID=MsG0480019453.01;Name=MsG0480019453.01
Chr4 mRNA 20576474 20577376 20576474 ID=MsG0480019453.01.T01;Parent=MsG0480019453.01;Name=MsG0480019453.01.T01;_AED=0.48;_eAED=0.48;_QI=0|-1|0|1|-1|1|1|0|300
Chr4 exon 20576474 20577376 20576474 ID=MsG0480019453.01.T01:exon:9994;Parent=MsG0480019453.01.T01
Chr4 CDS 20576474 20577376 20576474 ID=MsG0480019453.01.T01:cds;Parent=MsG0480019453.01.T01
Gene Sequence

>MsG0480019453.01.T01

ATGAAGGAAGAATTGATTCAACTTTGGATGGATAATGGATTTATTGCAAAGAGGAATTTAGAGGTTGAAGATGTTGGAAACAAGGTTTGGAAGGAATTGTACCAAAAATCATTCTTTCAAGACATCAAGATGGATGAATATTCTGGAGACATTTCTTTCAAGATGCATGATCTTGTCCATGATCTCGCTCAATCAGTAATGGGGCAAGAATGTATGTATTTGGAGAATAAAAACATGACTAATTTGTCAAAAAGCACACACCACATTGGTTTTGACCACCACGACTTGTTATCATTCGATGAGAATGCTTTCAAAAAAGTTGAATCCTTGCGAACATTGTTTCAGTTGAATTTTTATGCCCTAGAAAAACATGATTACTTCCCAACTTACATTTCTCTTAGGGTTTTATGCACAACCTTTATCCGGGGTCCATTACTAGGTAGTTTAATTCATTTAAGGTATTTAGAGCTTTGTTCTCTTGACATAAAAAAGTTGCCTGACTCAATTTACAACTTACAAAAACTGGAAACCTTGAAAATAAATCATTGTGGTGAACTGAGTTGTCTCCCAAAACACTTGGCTTGCTTACAAAATCTTAGACATATAGTCATTGAAGAATGTCGATCTTTGTCTCGAATGTTTCCGAACATTGGAAAATTATCTTGTCTAAGAACATTAAGTGTGTACATTGTTAGTTTTGAGAAATGGAATACCTTGACAGAGTTACGTGATCTAAACCTCGGTGGAAAACTGAGTATCAAAGGCTTAAAAGATGTTCGCAGTTTATCGGAAGCTCAAGAAGCCAATTTGATGGGCAAAAAAAACCTCCAACAATTATGCTTGTCATGGGGATACGAGGAGGAATCTACTATTAGTGCTGAGCAAGTACTTGAAGTGCTTTAA

Protein sequence

>MsG0480019453.01.T01

MKEELIQLWMDNGFIAKRNLEVEDVGNKVWKELYQKSFFQDIKMDEYSGDISFKMHDLVHDLAQSVMGQECMYLENKNMTNLSKSTHHIGFDHHDLLSFDENAFKKVESLRTLFQLNFYALEKHDYFPTYISLRVLCTTFIRGPLLGSLIHLRYLELCSLDIKKLPDSIYNLQKLETLKINHCGELSCLPKHLACLQNLRHIVIEECRSLSRMFPNIGKLSCLRTLSVYIVSFEKWNTLTELRDLNLGGKLSIKGLKDVRSLSEAQEANLMGKKNLQQLCLSWGYEEESTISAEQVLEVL*