AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480022029.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022029.01.T01 MTR_4g080823 93.385 771 45 2 1 770 1 766 0.0 1439
MsG0480022029.01.T01 MTR_4g080890 89.842 758 71 2 10 766 1 753 0.0 1362
MsG0480022029.01.T01 MTR_0651s0010 91.337 658 51 2 10 666 1 653 0.0 1193
MsG0480022029.01.T01 MTR_7g097210 57.257 751 296 11 15 761 5 734 0.0 840
MsG0480022029.01.T01 MTR_1g075650 61.235 583 175 9 180 761 3 535 0.0 717
MsG0480022029.01.T01 MTR_7g097210 61.565 575 208 7 188 761 2 564 0.0 696
MsG0480022029.01.T01 MTR_5g025650 43.583 787 377 17 21 763 64 827 0.0 594
MsG0480022029.01.T01 MTR_8g072210 41.774 778 385 13 28 763 57 808 0.0 563
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480022029.01.T01 AT3G23410 60.027 738 282 6 31 764 15 743 0.0 874
MsG0480022029.01.T01 AT4G28570 57.048 752 298 7 15 761 11 742 0.0 843
MsG0480022029.01.T01 AT4G28570 57.048 752 298 7 15 761 11 742 0.0 843
MsG0480022029.01.T01 AT3G23410 62.242 678 246 4 90 764 5 675 0.0 842
MsG0480022029.01.T01 AT1G03990 49.607 764 363 12 8 763 5 754 0.0 742
MsG0480022029.01.T01 AT4G19380 43.043 769 382 16 22 763 27 766 0.0 560
MsG0480022029.01.T01 AT4G19380 43.426 753 372 15 36 763 1 724 0.0 554

Find 156 sgRNAs with CRISPR-Local

Find 288 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAAACATTTCTTCTTCTTTC+TGG 0.073106 4:-67176890 None:intergenic
GTCCCTTGTTTCTCTCCTTT+TGG 0.180580 4:-67176763 None:intergenic
TCTTGTTTGAAAATAATTAT+AGG 0.260541 4:+67176857 MsG0480022029.01.T01:CDS
CAACTTCTCAAGCTTGTCTT+TGG 0.271024 4:+67175803 MsG0480022029.01.T01:CDS
TGATTCCCTGGTGAATTTCT+TGG 0.279412 4:-67176712 None:intergenic
TTTCTTCTTCTTTCTGGTAT+TGG 0.293147 4:-67176884 None:intergenic
GTGATTAAATGTGCTGTTCT+TGG 0.295870 4:-67177734 None:intergenic
ATGGACCAACAATATGAAAA+TGG 0.302883 4:+67176403 MsG0480022029.01.T01:CDS
CTTGAGAAGTTGTGGATAAA+TGG 0.306281 4:-67175792 None:intergenic
AAACCACTAGAGATCATTAA+TGG 0.311728 4:-67177009 None:intergenic
TATTGTGGTTCATGTGGTTA+TGG 0.314221 4:+67176736 MsG0480022029.01.T01:CDS
TATTGATAAGGGTGATTCTA+TGG 0.316225 4:+67175706 MsG0480022029.01.T01:CDS
GTTGATTGAATAGTAATCAT+AGG 0.337491 4:-67178172 None:intergenic
CAGAAAGAAGAAGAAATGTT+TGG 0.347440 4:+67176891 MsG0480022029.01.T01:CDS
TAAGCGAATGCGAGTCTAAA+AGG 0.353718 4:-67175876 None:intergenic
TTCTAGTGATGAATAATCTT+CGG 0.371885 4:-67176371 None:intergenic
TCAATATATCCATGGGAATC+AGG 0.373653 4:+67177680 MsG0480022029.01.T01:CDS
CATTGTCACCAGGTGAGAAT+TGG 0.377821 4:+67177999 MsG0480022029.01.T01:CDS
AGAAAAGGGTGTCAAAATCT+TGG 0.379576 4:+67176670 MsG0480022029.01.T01:CDS
TGGCTTATATCAACAAGGTT+GGG 0.380283 4:+67175726 MsG0480022029.01.T01:CDS
ATATGAAAAGAATTAATATA+TGG 0.387736 4:-67174190 None:intergenic
GTATACTTCTGCTCATCAAA+TGG 0.389845 4:+67178027 MsG0480022029.01.T01:CDS
TATACTTCTGCTCATCAAAT+GGG 0.393187 4:+67178028 MsG0480022029.01.T01:CDS
TGCTCTGTCTTAGTAAGAAA+TGG 0.394689 4:+67175769 MsG0480022029.01.T01:CDS
CAAAATCAAGTATTAAGAAA+AGG 0.411212 4:+67176655 MsG0480022029.01.T01:CDS
TCTCTAGAACAATCACTTTG+TGG 0.413037 4:-67176330 None:intergenic
GATTCTACTGTTTAAAGTCT+TGG 0.419421 4:-67176923 None:intergenic
CAGAAGCAGTAATATTGATA+AGG 0.422013 4:+67175694 MsG0480022029.01.T01:CDS
TCTAGTGATGAATAATCTTC+GGG 0.422485 4:-67176370 None:intergenic
GATGCAGTAGTTGTTGGTTC+TGG 0.425266 4:+67176265 MsG0480022029.01.T01:CDS
AGAAAGAAGAAGAAATGTTT+GGG 0.431123 4:+67176892 MsG0480022029.01.T01:CDS
TTAATAATGATGATACTTTG+TGG 0.431271 4:-67177589 None:intergenic
TTGGGGACTTTGTTGATTTG+TGG 0.432818 4:+67175744 MsG0480022029.01.T01:CDS
TGTGGTTATGGTTGTCCAAA+AGG 0.434505 4:+67176748 MsG0480022029.01.T01:CDS
GTAGTTGTTGGTTCTGGCTG+TGG 0.438334 4:+67176271 MsG0480022029.01.T01:CDS
CTTGTAGATGCTGTTGAAAA+AGG 0.445193 4:+67176799 MsG0480022029.01.T01:CDS
GAAGGTGCTGTTGATGAAAA+TGG 0.445503 4:+67178079 MsG0480022029.01.T01:CDS
AAAGGTGCTGTGATCATAAC+AGG 0.453948 4:+67176817 MsG0480022029.01.T01:CDS
GTGGTGGTTCAGCTGTTAAT+TGG 0.455365 4:+67176482 MsG0480022029.01.T01:CDS
GCATCATCCATTGGCAATGA+AGG 0.456373 4:-67174390 None:intergenic
ACCTGCAGAAATTGTCACTT+TGG 0.458514 4:-67176968 None:intergenic
CAGAAATGTTGAAGAAAGAC+TGG 0.461374 4:-67174461 None:intergenic
ACTCACGTATATACCTCGTC+AGG 0.463841 4:-67174501 None:intergenic
TAATGAGAACACTAGCGAAC+AGG 0.464546 4:+67177934 MsG0480022029.01.T01:CDS
TATCCGATGGCTTTCCATGC+CGG 0.465397 4:-67176070 None:intergenic
AAAATCAAGTATTAAGAAAA+GGG 0.465765 4:+67176656 MsG0480022029.01.T01:CDS
TCATATTGTTGGTCCATTGA+AGG 0.466560 4:-67176397 None:intergenic
AAAGTGATTGTTCTAGAGAA+AGG 0.469246 4:+67176334 MsG0480022029.01.T01:CDS
GTATATACCTCGTCAGGGAT+TGG 0.472564 4:-67174495 None:intergenic
ATGGCTTATATCAACAAGGT+TGG 0.474407 4:+67175725 MsG0480022029.01.T01:CDS
GAAGAAATGTTTGGGAGTGT+TGG 0.474637 4:+67176900 MsG0480022029.01.T01:CDS
TGCAGAGGGCTCTCAAGCTT+AGG 0.477034 4:+67175844 MsG0480022029.01.T01:CDS
TCAAATGGGGAGTTGTAGAA+TGG 0.477133 4:+67178042 MsG0480022029.01.T01:CDS
ATTAAACTTTATACGTGAGA+TGG 0.480457 4:+67178478 MsG0480022029.01.T01:three_prime_UTR
GCTTCTGTCCTTTCAAATGC+AGG 0.481266 4:+67176307 MsG0480022029.01.T01:CDS
TTGCATTAAAACACCAGAAA+AGG 0.481522 4:+67176510 MsG0480022029.01.T01:CDS
GTTGGTTCTGGCTGTGGAGG+AGG 0.482681 4:+67176277 MsG0480022029.01.T01:CDS
CAGAAAAGGTGTTGAAAGAA+TGG 0.485140 4:+67176524 MsG0480022029.01.T01:CDS
AAATGTGATGCAGTAGTTGT+TGG 0.485936 4:+67176259 MsG0480022029.01.T01:CDS
GGTGACAATGCTCCTTCCAT+TGG 0.486201 4:-67177986 None:intergenic
AGAAGCAGTAATATTGATAA+GGG 0.492373 4:+67175695 MsG0480022029.01.T01:CDS
CTTTGTGGCCTGCATTTGAA+AGG 0.494540 4:-67176315 None:intergenic
CACAATGAAGCTACAAATTG+AGG 0.494663 4:+67176945 MsG0480022029.01.T01:CDS
TGATGAAAATGGTGAGAGTT+GGG 0.496388 4:+67178090 MsG0480022029.01.T01:CDS
CATAGAGTATCTATCTGCTA+TGG 0.499902 4:+67176579 MsG0480022029.01.T01:CDS
CATTTGCATCAATATATCCA+TGG 0.503382 4:+67177672 MsG0480022029.01.T01:CDS
GAAGATTATTCATCACTAGA+AGG 0.507111 4:+67176373 MsG0480022029.01.T01:CDS
TGTGTTGCCTTCATTGCCAA+TGG 0.507516 4:+67174383 MsG0480022029.01.T01:CDS
GCTGGTTCAACAGTAGGTGG+TGG 0.508719 4:+67176466 MsG0480022029.01.T01:CDS
GCAGCAGGAGCTGTTGAAGT+AGG 0.511117 4:+67177878 MsG0480022029.01.T01:CDS
TATCCCCATGTCATTAGTAC+AGG 0.513550 4:-67177069 None:intergenic
ATCACTAGAAGGTCCTTCAA+TGG 0.515670 4:+67176384 MsG0480022029.01.T01:CDS
AGTGTGCTTCCAACTGCTGT+TGG 0.516894 4:+67178142 MsG0480022029.01.T01:CDS
TAATTATACACCATATATGT+TGG 0.520953 4:+67174145 None:intergenic
TTTCTAAGAGCATCATCCAT+TGG 0.520961 4:-67174399 None:intergenic
ATAATTGAGACACCATTACT+AGG 0.525334 4:+67177641 MsG0480022029.01.T01:CDS
TTGAGTCAAGTGTGACATTG+AGG 0.526976 4:-67176216 None:intergenic
ATGGAAAGCCATCGGATATG+AGG 0.528852 4:+67176075 MsG0480022029.01.T01:CDS
AAAGTGACAATTTCTGCAGG+TGG 0.529305 4:+67176970 MsG0480022029.01.T01:CDS
AGAAGAAAACAAAGAGGCAT+AGG 0.530309 4:-67175908 None:intergenic
AATGAAAATTGTACACAAGA+AGG 0.531263 4:+67176628 MsG0480022029.01.T01:CDS
TTGATTGAATAGTAATCATA+GGG 0.531890 4:-67178171 None:intergenic
GGCTTATATCAACAAGGTTG+GGG 0.532309 4:+67175727 MsG0480022029.01.T01:CDS
AAGACAAGCTTGAGAAGTTG+TGG 0.536089 4:-67175800 None:intergenic
CACAACACAGAAAGAAAGAT+GGG 0.536560 4:+67174258 MsG0480022029.01.T01:CDS
CTGAGAATTCTAATAGCAGC+AGG 0.537001 4:+67177863 MsG0480022029.01.T01:CDS
TATCGATAGTGTTTATCCAA+TGG 0.545025 4:+67177970 MsG0480022029.01.T01:CDS
GCCAAAGTGACAATTTCTGC+AGG 0.549592 4:+67176967 MsG0480022029.01.T01:CDS
TTGATGAAAATGGTGAGAGT+TGG 0.551525 4:+67178089 MsG0480022029.01.T01:CDS
AAGAGAAAAGATTGTGCAGA+GGG 0.551533 4:+67175830 MsG0480022029.01.T01:CDS
TTTGTCATCCATTGTTGAGT+GGG 0.551643 4:+67174286 MsG0480022029.01.T01:CDS
CAAATGGGGAGTTGTAGAAT+GGG 0.552016 4:+67178043 MsG0480022029.01.T01:CDS
TGTCACAGGTAAAATCTATG+AGG 0.552231 4:+67177547 MsG0480022029.01.T01:intron
GGGTTAACACCAACAGCAGT+TGG 0.556806 4:-67178151 None:intergenic
GAACCACAATAATGATTCCC+TGG 0.558303 4:-67176724 None:intergenic
TTTGCTGGTTCAACAGTAGG+TGG 0.559029 4:+67176463 MsG0480022029.01.T01:CDS
AATCATTATTGTGGTTCATG+TGG 0.563673 4:+67176730 MsG0480022029.01.T01:CDS
TATATTGATGCAAATGATGA+TGG 0.566974 4:-67177665 None:intergenic
TCCATCCTGTACTAATGACA+TGG 0.567525 4:+67177064 MsG0480022029.01.T01:CDS
TCACAACACAGAAAGAAAGA+TGG 0.567714 4:+67174257 MsG0480022029.01.T01:CDS
GGTGAGAGTTGGGAAGCTGA+AGG 0.571561 4:+67178100 MsG0480022029.01.T01:CDS
GTGAGAGTTGGGAAGCTGAA+GGG 0.574364 4:+67178101 MsG0480022029.01.T01:CDS
AAGTGACAATTTCTGCAGGT+GGG 0.574604 4:+67176971 MsG0480022029.01.T01:CDS
TCTCTCACCCCACTCAACAA+TGG 0.575157 4:-67174294 None:intergenic
AAGTCAAGTCCTGATTCCCA+TGG 0.575765 4:-67177689 None:intergenic
AGTGACAATTTCTGCAGGTG+GGG 0.576018 4:+67176972 MsG0480022029.01.T01:CDS
ATAATAAGAGACAAAGCAAG+TGG 0.576779 4:+67177758 MsG0480022029.01.T01:CDS
GATAGAGAGAATATGAGAGC+TGG 0.578200 4:+67177827 MsG0480022029.01.T01:CDS
ATTGTTGAGTGGGGTGAGAG+AGG 0.578457 4:+67174296 MsG0480022029.01.T01:CDS
CCCATGTCATTAGTACAGGA+TGG 0.579090 4:-67177065 None:intergenic
GTTGTTGGTTCTGGCTGTGG+AGG 0.580402 4:+67176274 MsG0480022029.01.T01:CDS
ATTTGCATCAATATATCCAT+GGG 0.581262 4:+67177673 MsG0480022029.01.T01:CDS
TAGAATGGGAGTGAATGAAA+AGG 0.583569 4:+67178057 MsG0480022029.01.T01:CDS
TCACCAGGGAATCATTATTG+TGG 0.584122 4:+67176721 MsG0480022029.01.T01:CDS
GTTTGTCATCCATTGTTGAG+TGG 0.586629 4:+67174285 MsG0480022029.01.T01:CDS
AACAAGGGACTCAAGTTACA+TGG 0.588903 4:+67176776 MsG0480022029.01.T01:CDS
GATAGTGTTTATCCAATGGA+AGG 0.598350 4:+67177974 MsG0480022029.01.T01:CDS
AGTTGTGTCATGTTCATGCA+TGG 0.599087 4:-67176167 None:intergenic
GAAACTGTGTGTGAGAGGAT+TGG 0.599841 4:+67176601 MsG0480022029.01.T01:CDS
TACAAATTCCAATTCTCACC+TGG 0.600068 4:-67178007 None:intergenic
CTATGGAAACTGTGTGTGAG+AGG 0.600732 4:+67176596 MsG0480022029.01.T01:CDS
TTGTCATCCATTGTTGAGTG+GGG 0.601389 4:+67174287 MsG0480022029.01.T01:CDS
ATGGAAGGAGCATTGTCACC+AGG 0.601599 4:+67177989 MsG0480022029.01.T01:CDS
CAACAATCTCTATCTAACAA+AGG 0.604364 4:+67176193 MsG0480022029.01.T01:CDS
GTAGGAACACACAGAAGTGA+TGG 0.615648 4:+67177896 MsG0480022029.01.T01:CDS
GTCACAGGTAAAATCTATGA+GGG 0.616658 4:+67177548 MsG0480022029.01.T01:intron
TTCTATGGCTTATATCAACA+AGG 0.617366 4:+67175721 MsG0480022029.01.T01:CDS
CCATCCTGTACTAATGACAT+GGG 0.618479 4:+67177065 MsG0480022029.01.T01:CDS
TGTCCAAAAGGAGAGAAACA+AGG 0.624436 4:+67176760 MsG0480022029.01.T01:CDS
TGTTGATACCTCATATCCGA+TGG 0.624751 4:-67176083 None:intergenic
AAAATGGTGATAATCCGGCA+TGG 0.627391 4:+67176056 MsG0480022029.01.T01:CDS
GCTGAGATGTTAGTGAAGAG+TGG 0.628102 4:+67175666 MsG0480022029.01.T01:CDS
CAATAAGTCAGATGAAATCA+CGG 0.629518 4:+67178287 MsG0480022029.01.T01:three_prime_UTR
AATCCGGCATGGAAAGCCAT+CGG 0.629555 4:+67176067 MsG0480022029.01.T01:CDS
CCACCATTAATGATCTCTAG+TGG 0.630098 4:+67177006 MsG0480022029.01.T01:CDS
GAATCAAAATCAGATCTCAA+AGG 0.635229 4:+67177099 MsG0480022029.01.T01:CDS
CTCACGTATATACCTCGTCA+GGG 0.638165 4:-67174500 None:intergenic
ATGGGAGTGAATGAAAAGGA+AGG 0.638461 4:+67178061 MsG0480022029.01.T01:CDS
CCCAAGAGAAGAAAACAAAG+AGG 0.641068 4:-67175914 None:intergenic
ATGAGAGCTGGTTTACAACA+AGG 0.645336 4:+67177839 MsG0480022029.01.T01:CDS
GACCAACAATATGAAAATGG+AGG 0.646970 4:+67176406 MsG0480022029.01.T01:CDS
AATGATGATGGTCCTAGTAA+TGG 0.648405 4:-67177653 None:intergenic
GTCACTAACAAGCATATGTG+AGG 0.652709 4:+67174359 MsG0480022029.01.T01:CDS
GGTGTTGAAAGAATGGTCAG+AGG 0.659062 4:+67176531 MsG0480022029.01.T01:CDS
GTCCAAAAGGAGAGAAACAA+GGG 0.659274 4:+67176761 MsG0480022029.01.T01:CDS
TATGTGCCAAGAAATTCACC+AGG 0.661064 4:+67176706 MsG0480022029.01.T01:CDS
ATACTTCTGCTCATCAAATG+GGG 0.665706 4:+67178029 MsG0480022029.01.T01:CDS
AAAGAGAAAAGATTGTGCAG+AGG 0.669869 4:+67175829 MsG0480022029.01.T01:CDS
GAGGATAGCAAATACAAACA+TGG 0.673701 4:+67174315 MsG0480022029.01.T01:CDS
TATGTATCCAATCCCTGACG+AGG 0.674932 4:+67174488 MsG0480022029.01.T01:CDS
ACAGGTAAAATCTATGAGGG+AGG 0.676529 4:+67177551 MsG0480022029.01.T01:intron
CCACTAGAGATCATTAATGG+TGG 0.685061 4:-67177006 None:intergenic
TGATTATGATGAATCAAGCA+AGG 0.685314 4:+67174434 MsG0480022029.01.T01:CDS
ATGCGAGTCTAAAAGGAGTG+AGG 0.691376 4:-67175869 None:intergenic
CATCCTGTACTAATGACATG+GGG 0.691532 4:+67177066 MsG0480022029.01.T01:CDS
ATGTGCCAAGAAATTCACCA+GGG 0.759136 4:+67176707 MsG0480022029.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATTAAAATAACAACAT+CGG + Chr4:67175030-67175049 MsG0480022029.01.T01:intron 10.0%
!! ATATGAAAAGAATTAATATA+TGG - Chr4:67174193-67174212 None:intergenic 10.0%
!!! ACTTCTTATAAATTTATTTT+AGG - Chr4:67175265-67175284 None:intergenic 10.0%
!!! CTTCTTATAAATTTATTTTA+GGG - Chr4:67175264-67175283 None:intergenic 10.0%
!! AAAATCAAGTATTAAGAAAA+GGG + Chr4:67176656-67176675 MsG0480022029.01.T01:CDS 15.0%
!! ACTCTTTATAAAATTATGTA+AGG - Chr4:67175476-67175495 None:intergenic 15.0%
!! ATAATGTAAAGATCTAATAT+GGG + Chr4:67175329-67175348 MsG0480022029.01.T01:intron 15.0%
!!! AATAGTTGACAAATTTTAAT+TGG + Chr4:67174775-67174794 MsG0480022029.01.T01:intron 15.0%
!!! ATGAAAAATTTTAGAGTAAA+GGG - Chr4:67175218-67175237 None:intergenic 15.0%
!!! TATGAAAAATTTTAGAGTAA+AGG - Chr4:67175219-67175238 None:intergenic 15.0%
!!! TATTAACTAGTTCTTTTATA+AGG + Chr4:67174218-67174237 MsG0480022029.01.T01:five_prime_UTR 15.0%
!!! TCTTGTTTGAAAATAATTAT+AGG + Chr4:67176857-67176876 MsG0480022029.01.T01:CDS 15.0%
!! AAATTGAACTTTAAACTTTC+AGG - Chr4:67175102-67175121 None:intergenic 20.0%
!! ATAACTTTGTACCAATAATA+TGG - Chr4:67177168-67177187 None:intergenic 20.0%
!! ATATAAGTTTGTAAGATAAG+AGG - Chr4:67175503-67175522 None:intergenic 20.0%
!! CAAAATCAAGTATTAAGAAA+AGG + Chr4:67176655-67176674 MsG0480022029.01.T01:CDS 20.0%
!! CAAATAAGATATATTAGATG+AGG - Chr4:67175571-67175590 None:intergenic 20.0%
!! CAATTAAAATTGAACAGTTA+TGG + Chr4:67174972-67174991 MsG0480022029.01.T01:intron 20.0%
!! CATAATGTAAAGATCTAATA+TGG + Chr4:67175328-67175347 MsG0480022029.01.T01:intron 20.0%
!! GGTTTAAAGAATAAAAACAT+TGG + Chr4:67177027-67177046 MsG0480022029.01.T01:CDS 20.0%
!! TAAAGAATAAAAACATTGGT+AGG + Chr4:67177031-67177050 MsG0480022029.01.T01:CDS 20.0%
!! TAACGTTAAATCATATTAGT+CGG - Chr4:67174931-67174950 None:intergenic 20.0%
!! TTAATAATGATGATACTTTG+TGG - Chr4:67177592-67177611 None:intergenic 20.0%
!! TTGATTGAATAGTAATCATA+GGG - Chr4:67178174-67178193 None:intergenic 20.0%
!!! AATGATCTTTTATTTTGTCA+CGG - Chr4:67178395-67178414 None:intergenic 20.0%
!!! ATTTTGTAGGTTGATAAAAA+TGG + Chr4:67176040-67176059 MsG0480022029.01.T01:intron 20.0%
!!! CTTTTCTTAATACTTGATTT+TGG - Chr4:67176657-67176676 None:intergenic 20.0%
!!! GTTTTGTTTAACCATATTAT+TGG + Chr4:67177154-67177173 MsG0480022029.01.T01:intron 20.0%
! AATGAAAATTGTACACAAGA+AGG + Chr4:67176628-67176647 MsG0480022029.01.T01:CDS 25.0%
! AGAAAGAAGAAGAAATGTTT+GGG + Chr4:67176892-67176911 MsG0480022029.01.T01:CDS 25.0%
! AGAAGCAGTAATATTGATAA+GGG + Chr4:67175695-67175714 MsG0480022029.01.T01:CDS 25.0%
! ATCTTAACTAGTTACATGTT+TGG + Chr4:67177390-67177409 MsG0480022029.01.T01:intron 25.0%
! ATTAAACTTTATACGTGAGA+TGG + Chr4:67178478-67178497 MsG0480022029.01.T01:three_prime_UTR 25.0%
! ATTTGCATCAATATATCCAT+GGG + Chr4:67177673-67177692 MsG0480022029.01.T01:CDS 25.0%
! GTTGATTGAATAGTAATCAT+AGG - Chr4:67178175-67178194 None:intergenic 25.0%
! TATATTGATGCAAATGATGA+TGG - Chr4:67177668-67177687 None:intergenic 25.0%
! TGATAAAAATGGTGATAATC+CGG + Chr4:67176051-67176070 MsG0480022029.01.T01:CDS 25.0%
! TGGTGTGTAATATAAAAAGT+TGG - Chr4:67175380-67175399 None:intergenic 25.0%
! TTCTAGTGATGAATAATCTT+CGG - Chr4:67176374-67176393 None:intergenic 25.0%
! TTTGTGTTTGTTTGATATCA+CGG - Chr4:67177472-67177491 None:intergenic 25.0%
!! AATAGGATTGTAGATTTTCT+TGG + Chr4:67178211-67178230 MsG0480022029.01.T01:CDS 25.0%
!! ATTGTAGATTTTCTTGGAAA+GGG + Chr4:67178217-67178236 MsG0480022029.01.T01:CDS 25.0%
!! ATTTTTGTGACCAACATATA+TGG - Chr4:67174158-67174177 None:intergenic 25.0%
!! CAAAGTTATCACTAATTTTC+CGG + Chr4:67177179-67177198 MsG0480022029.01.T01:intron 25.0%
!! CTGCATTTTGTATTTCAAAT+AGG + Chr4:67178194-67178213 MsG0480022029.01.T01:CDS 25.0%
!! TTAAGAAAGTGACATTTTGT+AGG + Chr4:67176027-67176046 MsG0480022029.01.T01:intron 25.0%
!! TTCTATAATTCCCTTTTCAA+GGG - Chr4:67176146-67176165 None:intergenic 25.0%
!! TTGCATTTAGGAATTTCTTT+TGG - Chr4:67174584-67174603 None:intergenic 25.0%
!! TTTCTATAATTCCCTTTTCA+AGG - Chr4:67176147-67176166 None:intergenic 25.0%
!!! TAACTAGTTCTTTTATAAGG+TGG + Chr4:67174221-67174240 MsG0480022029.01.T01:five_prime_UTR 25.0%
!!! TCAAGAATAGTTATTTTTGC+TGG + Chr4:67176448-67176467 MsG0480022029.01.T01:CDS 25.0%
AAACCACTAGAGATCATTAA+TGG - Chr4:67177012-67177031 None:intergenic 30.0%
AATCATTATTGTGGTTCATG+TGG + Chr4:67176730-67176749 MsG0480022029.01.T01:CDS 30.0%
ACTCAAAATGTTTGGTATAG+TGG + Chr4:67175057-67175076 MsG0480022029.01.T01:intron 30.0%
ACTCGTACCAATATAAAGTT+GGG + Chr4:67177317-67177336 MsG0480022029.01.T01:intron 30.0%
ATAATAAGAGACAAAGCAAG+TGG + Chr4:67177758-67177777 MsG0480022029.01.T01:CDS 30.0%
ATAATTGAGACACCATTACT+AGG + Chr4:67177641-67177660 MsG0480022029.01.T01:CDS 30.0%
ATGGACCAACAATATGAAAA+TGG + Chr4:67176403-67176422 MsG0480022029.01.T01:CDS 30.0%
ATTATTGTGAGTGTACGAAA+TGG - Chr4:67175973-67175992 None:intergenic 30.0%
ATTCAGCTCATAGGAAAAAT+AGG - Chr4:67177511-67177530 None:intergenic 30.0%
ATTTGAACACATGCAAACTA+TGG + Chr4:67175541-67175560 MsG0480022029.01.T01:intron 30.0%
CAAACATTTCTTCTTCTTTC+TGG - Chr4:67176893-67176912 None:intergenic 30.0%
CAACAATCTCTATCTAACAA+AGG + Chr4:67176193-67176212 MsG0480022029.01.T01:CDS 30.0%
CAATAAGTCAGATGAAATCA+CGG + Chr4:67178287-67178306 MsG0480022029.01.T01:three_prime_UTR 30.0%
CAGAAAGAAGAAGAAATGTT+TGG + Chr4:67176891-67176910 MsG0480022029.01.T01:CDS 30.0%
CAGAAGCAGTAATATTGATA+AGG + Chr4:67175694-67175713 MsG0480022029.01.T01:CDS 30.0%
CATTTGCATCAATATATCCA+TGG + Chr4:67177672-67177691 MsG0480022029.01.T01:CDS 30.0%
CCTGTCCAAAATTGTTAATT+TGG - Chr4:67175405-67175424 None:intergenic 30.0%
GAAGATTATTCATCACTAGA+AGG + Chr4:67176373-67176392 MsG0480022029.01.T01:CDS 30.0%
GAATCAAAATCAGATCTCAA+AGG + Chr4:67177099-67177118 MsG0480022029.01.T01:CDS 30.0%
GTTCAACATAGAAATAGTGT+TGG + Chr4:67175444-67175463 MsG0480022029.01.T01:intron 30.0%
TACTCTACCCAACTTTATAT+TGG - Chr4:67177327-67177346 None:intergenic 30.0%
TAGATGTAAATTCAGCTCAT+AGG - Chr4:67177520-67177539 None:intergenic 30.0%
TATACTTCTGCTCATCAAAT+GGG + Chr4:67178028-67178047 MsG0480022029.01.T01:CDS 30.0%
TATCGATAGTGTTTATCCAA+TGG + Chr4:67177970-67177989 MsG0480022029.01.T01:CDS 30.0%
TATTGATAAGGGTGATTCTA+TGG + Chr4:67175706-67175725 MsG0480022029.01.T01:CDS 30.0%
TCGGAAAAACTCAAAATGTT+TGG + Chr4:67175049-67175068 MsG0480022029.01.T01:intron 30.0%
TCTAGTGATGAATAATCTTC+GGG - Chr4:67176373-67176392 None:intergenic 30.0%
TGATTATGATGAATCAAGCA+AGG + Chr4:67174434-67174453 MsG0480022029.01.T01:CDS 30.0%
TTCTATGGCTTATATCAACA+AGG + Chr4:67175721-67175740 MsG0480022029.01.T01:CDS 30.0%
TTGCATTAAAACACCAGAAA+AGG + Chr4:67176510-67176529 MsG0480022029.01.T01:CDS 30.0%
TTTGAACACATGCAAACTAT+GGG + Chr4:67175542-67175561 MsG0480022029.01.T01:intron 30.0%
! AATTAACAATTTTGGACAGG+AGG + Chr4:67175405-67175424 MsG0480022029.01.T01:intron 30.0%
! ACATCTATATGATTTGTCAC+AGG + Chr4:67177533-67177552 MsG0480022029.01.T01:intron 30.0%
! AGCTTTTGCAAAACTTAACA+TGG - Chr4:67178317-67178336 None:intergenic 30.0%
! ATACAAACATGGATTTTCTG+TGG + Chr4:67174326-67174345 MsG0480022029.01.T01:CDS 30.0%
! ATTAACAATTTTGGACAGGA+GGG + Chr4:67175406-67175425 MsG0480022029.01.T01:intron 30.0%
! CAATTTCTGCTTGTGTTTTT+AGG + Chr4:67175116-67175135 MsG0480022029.01.T01:intron 30.0%
! CCAAAATTGTTAATTTGGCT+TGG - Chr4:67175400-67175419 None:intergenic 30.0%
! CCAAATTAACAATTTTGGAC+AGG + Chr4:67175402-67175421 MsG0480022029.01.T01:intron 30.0%
! CCAAGCCAAATTAACAATTT+TGG + Chr4:67175397-67175416 MsG0480022029.01.T01:intron 30.0%
! CCTTGCAAGTCAATTTTATA+TGG + Chr4:67175295-67175314 MsG0480022029.01.T01:intron 30.0%
! GATTCTACTGTTTAAAGTCT+TGG - Chr4:67176926-67176945 None:intergenic 30.0%
! GATTGTAGATTTTCTTGGAA+AGG + Chr4:67178216-67178235 MsG0480022029.01.T01:CDS 30.0%
! TACCTCCATTTTCATATTGT+TGG - Chr4:67176411-67176430 None:intergenic 30.0%
! TTTCTTCTTCTTTCTGGTAT+TGG - Chr4:67176887-67176906 None:intergenic 30.0%
!! AAAATTGACTTGCAAGGTAA+GGG - Chr4:67175292-67175311 None:intergenic 30.0%
!! AAAGTGATTGTTCTAGAGAA+AGG + Chr4:67176334-67176353 MsG0480022029.01.T01:CDS 30.0%
!! CACTATTTCTATGTTGAACT+TGG - Chr4:67175443-67175462 None:intergenic 30.0%
!! CCATATAAAATTGACTTGCA+AGG - Chr4:67175298-67175317 None:intergenic 30.0%
!! TAAAATTGACTTGCAAGGTA+AGG - Chr4:67175293-67175312 None:intergenic 30.0%
!! TCTATAATTCCCTTTTCAAG+GGG - Chr4:67176145-67176164 None:intergenic 30.0%
!!! TGAGATCTGATTTTGATTCT+GGG - Chr4:67177098-67177117 None:intergenic 30.0%
!!! TTGAGATCTGATTTTGATTC+TGG - Chr4:67177099-67177118 None:intergenic 30.0%
AAAAAGAGACCCCTTGAAAA+GGG + Chr4:67176133-67176152 MsG0480022029.01.T01:CDS 35.0%
AAAGAGAAAAGATTGTGCAG+AGG + Chr4:67175829-67175848 MsG0480022029.01.T01:CDS 35.0%
AAATGTGATGCAGTAGTTGT+TGG + Chr4:67176259-67176278 MsG0480022029.01.T01:CDS 35.0%
AACTTTAAACTTTCAGGCTC+TGG - Chr4:67175096-67175115 None:intergenic 35.0%
AAGAGAAAAGATTGTGCAGA+GGG + Chr4:67175830-67175849 MsG0480022029.01.T01:CDS 35.0%
AAGTGGACAAGTAAAAACTG+AGG + Chr4:67177775-67177794 MsG0480022029.01.T01:CDS 35.0%
AGTGGACAAGTAAAAACTGA+GGG + Chr4:67177776-67177795 MsG0480022029.01.T01:CDS 35.0%
ATACTTCTGCTCATCAAATG+GGG + Chr4:67178029-67178048 MsG0480022029.01.T01:CDS 35.0%
ATCTTGTCTGTCTTAGACTA+GGG + Chr4:67175186-67175205 MsG0480022029.01.T01:intron 35.0%
ATGGCTTATATCAACAAGGT+TGG + Chr4:67175725-67175744 MsG0480022029.01.T01:CDS 35.0%
CAACTTTATATTGGTACGAG+TGG - Chr4:67177318-67177337 None:intergenic 35.0%
CACAACACAGAAAGAAAGAT+GGG + Chr4:67174258-67174277 MsG0480022029.01.T01:CDS 35.0%
CACAATGAAGCTACAAATTG+AGG + Chr4:67176945-67176964 MsG0480022029.01.T01:CDS 35.0%
CACTCGTACCAATATAAAGT+TGG + Chr4:67177316-67177335 MsG0480022029.01.T01:intron 35.0%
CAGAAATGTTGAAGAAAGAC+TGG - Chr4:67174464-67174483 None:intergenic 35.0%
CTAGTTACATGTTTGGTACA+CGG + Chr4:67177397-67177416 MsG0480022029.01.T01:intron 35.0%
CTTGAGAAGTTGTGGATAAA+TGG - Chr4:67175795-67175814 None:intergenic 35.0%
CTTGTAGATGCTGTTGAAAA+AGG + Chr4:67176799-67176818 MsG0480022029.01.T01:CDS 35.0%
GACCAACAATATGAAAATGG+AGG + Chr4:67176406-67176425 MsG0480022029.01.T01:CDS 35.0%
GAGGATAGCAAATACAAACA+TGG + Chr4:67174315-67174334 MsG0480022029.01.T01:CDS 35.0%
GATAGTGTTTATCCAATGGA+AGG + Chr4:67177974-67177993 MsG0480022029.01.T01:CDS 35.0%
GTATACTTCTGCTCATCAAA+TGG + Chr4:67178027-67178046 MsG0480022029.01.T01:CDS 35.0%
GTCACAGGTAAAATCTATGA+GGG + Chr4:67177548-67177567 MsG0480022029.01.T01:intron 35.0%
TACAAATTCCAATTCTCACC+TGG - Chr4:67178010-67178029 None:intergenic 35.0%
TAGAATGGGAGTGAATGAAA+AGG + Chr4:67178057-67178076 MsG0480022029.01.T01:CDS 35.0%
TATCTTGTCTGTCTTAGACT+AGG + Chr4:67175185-67175204 MsG0480022029.01.T01:intron 35.0%
TATTGTGGTTCATGTGGTTA+TGG + Chr4:67176736-67176755 MsG0480022029.01.T01:CDS 35.0%
TCAATATATCCATGGGAATC+AGG + Chr4:67177680-67177699 MsG0480022029.01.T01:CDS 35.0%
TCACAACACAGAAAGAAAGA+TGG + Chr4:67174257-67174276 MsG0480022029.01.T01:CDS 35.0%
TCATATTGTTGGTCCATTGA+AGG - Chr4:67176400-67176419 None:intergenic 35.0%
TCTAAATGTTCAATGCCAAC+AGG + Chr4:67175641-67175660 MsG0480022029.01.T01:intron 35.0%
TGATGAAAATGGTGAGAGTT+GGG + Chr4:67178090-67178109 MsG0480022029.01.T01:CDS 35.0%
TGCTCTGTCTTAGTAAGAAA+TGG + Chr4:67175769-67175788 MsG0480022029.01.T01:CDS 35.0%
TGGATCTCTTAAACAAGTCT+CGG - Chr4:67177286-67177305 None:intergenic 35.0%
TGGCTTATATCAACAAGGTT+GGG + Chr4:67175726-67175745 MsG0480022029.01.T01:CDS 35.0%
TGTCACAGGTAAAATCTATG+AGG + Chr4:67177547-67177566 MsG0480022029.01.T01:intron 35.0%
TTGATGAAAATGGTGAGAGT+TGG + Chr4:67178089-67178108 MsG0480022029.01.T01:CDS 35.0%
TTTGTCATCCATTGTTGAGT+GGG + Chr4:67174286-67174305 MsG0480022029.01.T01:CDS 35.0%
! AGAAGAAAACAAAGAGGCAT+AGG - Chr4:67175911-67175930 None:intergenic 35.0%
! CATAGAGTATCTATCTGCTA+TGG + Chr4:67176579-67176598 MsG0480022029.01.T01:CDS 35.0%
! CATTCTTTCAACACCTTTTC+TGG - Chr4:67176526-67176545 None:intergenic 35.0%
! CATTTTCCTATTAGTCGAGT+TGG - Chr4:67174716-67174735 None:intergenic 35.0%
! GTGATTAAATGTGCTGTTCT+TGG - Chr4:67177737-67177756 None:intergenic 35.0%
! TATGACAGAGATTAGTCATC+CGG - Chr4:67177201-67177220 None:intergenic 35.0%
! TTAACAATTTTGGACAGGAG+GGG + Chr4:67175407-67175426 MsG0480022029.01.T01:intron 35.0%
!! AAAAAGTTGGTGACCCTAAA+CGG - Chr4:67175367-67175386 None:intergenic 35.0%
!! AATGATGATGGTCCTAGTAA+TGG - Chr4:67177656-67177675 None:intergenic 35.0%
!! AGAAAAGGGTGTCAAAATCT+TGG + Chr4:67176670-67176689 MsG0480022029.01.T01:CDS 35.0%
!! CAGAAAAGGTGTTGAAAGAA+TGG + Chr4:67176524-67176543 MsG0480022029.01.T01:CDS 35.0%
!! CTGCATCACATTTGATTTTG+AGG - Chr4:67176252-67176271 None:intergenic 35.0%
!! TCTCTAGAACAATCACTTTG+TGG - Chr4:67176333-67176352 None:intergenic 35.0%
!! TTTCTAAGAGCATCATCCAT+TGG - Chr4:67174402-67174421 None:intergenic 35.0%
!!! ATTTTTGCTGGTTCAACAGT+AGG + Chr4:67176460-67176479 MsG0480022029.01.T01:CDS 35.0%
!!! CCTCTTTGTTTTCTTCTCTT+GGG + Chr4:67175914-67175933 MsG0480022029.01.T01:CDS 35.0%
!!! TGCTTGTGTTTTTAGGAAAG+AGG + Chr4:67175123-67175142 MsG0480022029.01.T01:intron 35.0%
AAAATGGTGATAATCCGGCA+TGG + Chr4:67176056-67176075 MsG0480022029.01.T01:CDS 40.0%
AAAGTGACAATTTCTGCAGG+TGG + Chr4:67176970-67176989 MsG0480022029.01.T01:CDS 40.0%
AACAAGGGACTCAAGTTACA+TGG + Chr4:67176776-67176795 MsG0480022029.01.T01:CDS 40.0%
AAGACAAGCTTGAGAAGTTG+TGG - Chr4:67175803-67175822 None:intergenic 40.0%
AAGTGACAATTTCTGCAGGT+GGG + Chr4:67176971-67176990 MsG0480022029.01.T01:CDS 40.0%
ACAGGTAAAATCTATGAGGG+AGG + Chr4:67177551-67177570 MsG0480022029.01.T01:intron 40.0%
AGTTGTGTCATGTTCATGCA+TGG - Chr4:67176170-67176189 None:intergenic 40.0%
ATCACTAGAAGGTCCTTCAA+TGG + Chr4:67176384-67176403 MsG0480022029.01.T01:CDS 40.0%
ATGGGAGTGAATGAAAAGGA+AGG + Chr4:67178061-67178080 MsG0480022029.01.T01:CDS 40.0%
ATGTGCCAAGAAATTCACCA+GGG + Chr4:67176707-67176726 MsG0480022029.01.T01:CDS 40.0%
ATGTTTGGTACACGGTGTAT+TGG + Chr4:67177405-67177424 MsG0480022029.01.T01:intron 40.0%
CAAAAAGAGACCCCTTGAAA+AGG + Chr4:67176132-67176151 MsG0480022029.01.T01:CDS 40.0%
CAAATGGGGAGTTGTAGAAT+GGG + Chr4:67178043-67178062 MsG0480022029.01.T01:CDS 40.0%
CAACTTCTCAAGCTTGTCTT+TGG + Chr4:67175803-67175822 MsG0480022029.01.T01:CDS 40.0%
CATCCTGTACTAATGACATG+GGG + Chr4:67177066-67177085 MsG0480022029.01.T01:CDS 40.0%
CCACCATTAATGATCTCTAG+TGG + Chr4:67177006-67177025 MsG0480022029.01.T01:CDS 40.0%
CCACTAGAGATCATTAATGG+TGG - Chr4:67177009-67177028 None:intergenic 40.0%
CCATCCTGTACTAATGACAT+GGG + Chr4:67177065-67177084 MsG0480022029.01.T01:CDS 40.0%
CCCAAGAGAAGAAAACAAAG+AGG - Chr4:67175917-67175936 None:intergenic 40.0%
CGTAGCAGTTTCTTGCATTT+AGG - Chr4:67174596-67174615 None:intergenic 40.0%
CTATTTGCCACAATTCAAGG+AGG - Chr4:67174837-67174856 None:intergenic 40.0%
CTGAGAATTCTAATAGCAGC+AGG + Chr4:67177863-67177882 MsG0480022029.01.T01:CDS 40.0%
GAACCACAATAATGATTCCC+TGG - Chr4:67176727-67176746 None:intergenic 40.0%
GAGTGATATTTGAGAGTGAG+GGG + Chr4:67177427-67177446 MsG0480022029.01.T01:intron 40.0%
GATAGAGAGAATATGAGAGC+TGG + Chr4:67177827-67177846 MsG0480022029.01.T01:CDS 40.0%
GATTAGAGTCGATCCGTTTA+GGG + Chr4:67175351-67175370 MsG0480022029.01.T01:intron 40.0%
GCACTATTTGCCACAATTCA+AGG - Chr4:67174840-67174859 None:intergenic 40.0%
GCTCATAGGAAAAATAGGCT+TGG - Chr4:67177506-67177525 None:intergenic 40.0%
GGAGTGATATTTGAGAGTGA+GGG + Chr4:67177426-67177445 MsG0480022029.01.T01:intron 40.0%
GGATCTCTTAAACAAGTCTC+GGG - Chr4:67177285-67177304 None:intergenic 40.0%
GGCTTATATCAACAAGGTTG+GGG + Chr4:67175727-67175746 MsG0480022029.01.T01:CDS 40.0%
GTCACTAACAAGCATATGTG+AGG + Chr4:67174359-67174378 MsG0480022029.01.T01:CDS 40.0%
GTCCAAAAGGAGAGAAACAA+GGG + Chr4:67176761-67176780 MsG0480022029.01.T01:CDS 40.0%
GTTTGATATCACGGTGAGTT+TGG - Chr4:67177463-67177482 None:intergenic 40.0%
GTTTGTCATCCATTGTTGAG+TGG + Chr4:67174285-67174304 MsG0480022029.01.T01:CDS 40.0%
TAAGCGAATGCGAGTCTAAA+AGG - Chr4:67175879-67175898 None:intergenic 40.0%
TAATGAGAACACTAGCGAAC+AGG + Chr4:67177934-67177953 MsG0480022029.01.T01:CDS 40.0%
TATCCCCATGTCATTAGTAC+AGG - Chr4:67177072-67177091 None:intergenic 40.0%
TATGTGCCAAGAAATTCACC+AGG + Chr4:67176706-67176725 MsG0480022029.01.T01:CDS 40.0%
TCAAATGGGGAGTTGTAGAA+TGG + Chr4:67178042-67178061 MsG0480022029.01.T01:CDS 40.0%
TCACCAGGGAATCATTATTG+TGG + Chr4:67176721-67176740 MsG0480022029.01.T01:CDS 40.0%
TCCATCCTGTACTAATGACA+TGG + Chr4:67177064-67177083 MsG0480022029.01.T01:CDS 40.0%
TGATTCCCTGGTGAATTTCT+TGG - Chr4:67176715-67176734 None:intergenic 40.0%
TGGAGTGATATTTGAGAGTG+AGG + Chr4:67177425-67177444 MsG0480022029.01.T01:intron 40.0%
TGTCCAAAAGGAGAGAAACA+AGG + Chr4:67176760-67176779 MsG0480022029.01.T01:CDS 40.0%
TGTGGCTGAAAAATAGGAAG+TGG - Chr4:67174814-67174833 None:intergenic 40.0%
TGTGGTTATGGTTGTCCAAA+AGG + Chr4:67176748-67176767 MsG0480022029.01.T01:CDS 40.0%
TGTTGATACCTCATATCCGA+TGG - Chr4:67176086-67176105 None:intergenic 40.0%
TTGAGTCAAGTGTGACATTG+AGG - Chr4:67176219-67176238 None:intergenic 40.0%
TTGTCATCCATTGTTGAGTG+GGG + Chr4:67174287-67174306 MsG0480022029.01.T01:CDS 40.0%
! ACCTGCAGAAATTGTCACTT+TGG - Chr4:67176971-67176990 None:intergenic 40.0%
! ATGAGAGCTGGTTTACAACA+AGG + Chr4:67177839-67177858 MsG0480022029.01.T01:CDS 40.0%
! GAAGAAATGTTTGGGAGTGT+TGG + Chr4:67176900-67176919 MsG0480022029.01.T01:CDS 40.0%
!! AAAGGTGCTGTGATCATAAC+AGG + Chr4:67176817-67176836 MsG0480022029.01.T01:CDS 40.0%
!! ACCTGACTACTCACTTTTAG+TGG + Chr4:67177223-67177242 MsG0480022029.01.T01:intron 40.0%
!! CCTGACTACTCACTTTTAGT+GGG + Chr4:67177224-67177243 MsG0480022029.01.T01:intron 40.0%
!! CTTTTCAAGGGGTCTCTTTT+TGG - Chr4:67176134-67176153 None:intergenic 40.0%
!! GAAGGTGCTGTTGATGAAAA+TGG + Chr4:67178079-67178098 MsG0480022029.01.T01:CDS 40.0%
!! TTGGGGACTTTGTTGATTTG+TGG + Chr4:67175744-67175763 MsG0480022029.01.T01:CDS 40.0%
!!! GCCTCTTTGTTTTCTTCTCT+TGG + Chr4:67175913-67175932 MsG0480022029.01.T01:CDS 40.0%
AAACTGCTACGATGTGCAAG+TGG + Chr4:67174605-67174624 MsG0480022029.01.T01:intron 45.0%
AACTGCTACGATGTGCAAGT+GGG + Chr4:67174606-67174625 MsG0480022029.01.T01:intron 45.0%
AAGTCAAGTCCTGATTCCCA+TGG - Chr4:67177692-67177711 None:intergenic 45.0%
ACCCACAATTAGGTTCCATG+TGG + Chr4:67174633-67174652 MsG0480022029.01.T01:intron 45.0%
ACTCACGTATATACCTCGTC+AGG - Chr4:67174504-67174523 None:intergenic 45.0%
AGCCACATGGAACCTAATTG+TGG - Chr4:67174638-67174657 None:intergenic 45.0%
AGTGACAATTTCTGCAGGTG+GGG + Chr4:67176972-67176991 MsG0480022029.01.T01:CDS 45.0%
ATGCGAGTCTAAAAGGAGTG+AGG - Chr4:67175872-67175891 None:intergenic 45.0%
ATGGAAAGCCATCGGATATG+AGG + Chr4:67176075-67176094 MsG0480022029.01.T01:CDS 45.0%
CATTGTCACCAGGTGAGAAT+TGG + Chr4:67177999-67178018 MsG0480022029.01.T01:CDS 45.0%
CCCACTAAAAGTGAGTAGTC+AGG - Chr4:67177227-67177246 None:intergenic 45.0%
CCCATGTCATTAGTACAGGA+TGG - Chr4:67177068-67177087 None:intergenic 45.0%
CTAACATCTCAGCAACCTGT+TGG - Chr4:67175659-67175678 None:intergenic 45.0%
CTATGGAAACTGTGTGTGAG+AGG + Chr4:67176596-67176615 MsG0480022029.01.T01:CDS 45.0%
CTCACGTATATACCTCGTCA+GGG - Chr4:67174503-67174522 None:intergenic 45.0%
CTTTGTGGCCTGCATTTGAA+AGG - Chr4:67176318-67176337 None:intergenic 45.0%
GAAACTGTGTGTGAGAGGAT+TGG + Chr4:67176601-67176620 MsG0480022029.01.T01:CDS 45.0%
GCATCATCCATTGGCAATGA+AGG - Chr4:67174393-67174412 None:intergenic 45.0%
GCCAAAGTGACAATTTCTGC+AGG + Chr4:67176967-67176986 MsG0480022029.01.T01:CDS 45.0%
GCCACATGGAACCTAATTGT+GGG - Chr4:67174637-67174656 None:intergenic 45.0%
GCTGAGATGTTAGTGAAGAG+TGG + Chr4:67175666-67175685 MsG0480022029.01.T01:CDS 45.0%
GCTTCTGTCCTTTCAAATGC+AGG + Chr4:67176307-67176326 MsG0480022029.01.T01:CDS 45.0%
GGATTAGAGTCGATCCGTTT+AGG + Chr4:67175350-67175369 MsG0480022029.01.T01:intron 45.0%
GGCAAATAGTGCGTTGTGAT+TGG + Chr4:67174848-67174867 MsG0480022029.01.T01:intron 45.0%
GGTACGAGTGGAAATGAACT+TGG - Chr4:67177306-67177325 None:intergenic 45.0%
GTAGGAACACACAGAAGTGA+TGG + Chr4:67177896-67177915 MsG0480022029.01.T01:CDS 45.0%
GTATATACCTCGTCAGGGAT+TGG - Chr4:67174498-67174517 None:intergenic 45.0%
GTGGTGGTTCAGCTGTTAAT+TGG + Chr4:67176482-67176501 MsG0480022029.01.T01:CDS 45.0%
TACGCACCAACTCGACTAAT+AGG + Chr4:67174707-67174726 MsG0480022029.01.T01:intron 45.0%
TATGTATCCAATCCCTGACG+AGG + Chr4:67174488-67174507 MsG0480022029.01.T01:CDS 45.0%
TGTGTTGCCTTCATTGCCAA+TGG + Chr4:67174383-67174402 MsG0480022029.01.T01:CDS 45.0%
! AGGAGGTGTGGCTGAAAAAT+AGG - Chr4:67174820-67174839 None:intergenic 45.0%
! GGTGTTGAAAGAATGGTCAG+AGG + Chr4:67176531-67176550 MsG0480022029.01.T01:CDS 45.0%
!! GATGCAGTAGTTGTTGGTTC+TGG + Chr4:67176265-67176284 MsG0480022029.01.T01:CDS 45.0%
!! GTCCCTTGTTTCTCTCCTTT+TGG - Chr4:67176766-67176785 None:intergenic 45.0%
!! TTTGCTGGTTCAACAGTAGG+TGG + Chr4:67176463-67176482 MsG0480022029.01.T01:CDS 45.0%
!!! GGGTCTCTTTTTGGTGTCAT+TGG - Chr4:67176125-67176144 None:intergenic 45.0%
!!! TTTAATTTTTATAATCATAT+TGG - Chr4:67175020-67175039 None:intergenic 5.0%
AATCCGGCATGGAAAGCCAT+CGG + Chr4:67176067-67176086 MsG0480022029.01.T01:CDS 50.0%
AGCCACACCTCCTTGAATTG+TGG + Chr4:67174827-67174846 MsG0480022029.01.T01:intron 50.0%
ATGTGGCTGCGTTGTGCATT+CGG + Chr4:67174650-67174669 MsG0480022029.01.T01:intron 50.0%
ATTGTTGAGTGGGGTGAGAG+AGG + Chr4:67174296-67174315 MsG0480022029.01.T01:CDS 50.0%
CTTGTGAATGGTGGTTGGGA+GGG - Chr4:67177255-67177274 None:intergenic 50.0%
GGGTTAACACCAACAGCAGT+TGG - Chr4:67178154-67178173 None:intergenic 50.0%
GGTGACAATGCTCCTTCCAT+TGG - Chr4:67177989-67178008 None:intergenic 50.0%
GTGAGAGTTGGGAAGCTGAA+GGG + Chr4:67178101-67178120 MsG0480022029.01.T01:CDS 50.0%
TATCCGATGGCTTTCCATGC+CGG - Chr4:67176073-67176092 None:intergenic 50.0%
TCTCTCACCCCACTCAACAA+TGG - Chr4:67174297-67174316 None:intergenic 50.0%
TGCCACAATTCAAGGAGGTG+TGG - Chr4:67174832-67174851 None:intergenic 50.0%
! CGTTGTGCATTCGGTGAAGT+TGG + Chr4:67174659-67174678 MsG0480022029.01.T01:intron 50.0%
! GAGCCTTGTGAATGGTGGTT+GGG - Chr4:67177259-67177278 None:intergenic 50.0%
! GGTTTGAGCCTTGTGAATGG+TGG - Chr4:67177264-67177283 None:intergenic 50.0%
! TCGGGTTTGAGCCTTGTGAA+TGG - Chr4:67177267-67177286 None:intergenic 50.0%
! TGAGCCTTGTGAATGGTGGT+TGG - Chr4:67177260-67177279 None:intergenic 50.0%
!! ATGGAAGGAGCATTGTCACC+AGG + Chr4:67177989-67178008 MsG0480022029.01.T01:CDS 50.0%
!! GTAGTTGTTGGTTCTGGCTG+TGG + Chr4:67176271-67176290 MsG0480022029.01.T01:CDS 50.0%
AGTGGGTGGGACCCACAATT+AGG + Chr4:67174623-67174642 MsG0480022029.01.T01:intron 55.0%
CCTCCCAACCACCATTCACA+AGG + Chr4:67177253-67177272 MsG0480022029.01.T01:intron 55.0%
CCTTGTGAATGGTGGTTGGG+AGG - Chr4:67177256-67177275 None:intergenic 55.0%
CGAAATGGCACGTTGCAGCA+AGG - Chr4:67175958-67175977 None:intergenic 55.0%
GAATGCACAACGCAGCCACA+TGG - Chr4:67174651-67174670 None:intergenic 55.0%
GCAGCAGGAGCTGTTGAAGT+AGG + Chr4:67177878-67177897 MsG0480022029.01.T01:CDS 55.0%
GCTACGATGTGCAAGTGGGT+GGG + Chr4:67174610-67174629 MsG0480022029.01.T01:intron 55.0%
GGTGAGAGTTGGGAAGCTGA+AGG + Chr4:67178100-67178119 MsG0480022029.01.T01:CDS 55.0%
TGCAGAGGGCTCTCAAGCTT+AGG + Chr4:67175844-67175863 MsG0480022029.01.T01:CDS 55.0%
TGCTACGATGTGCAAGTGGG+TGG + Chr4:67174609-67174628 MsG0480022029.01.T01:intron 55.0%
! GCTGGTTCAACAGTAGGTGG+TGG + Chr4:67176466-67176485 MsG0480022029.01.T01:CDS 55.0%
!! GTTGTTGGTTCTGGCTGTGG+AGG + Chr4:67176274-67176293 MsG0480022029.01.T01:CDS 55.0%
!! GTTGGTTCTGGCTGTGGAGG+AGG + Chr4:67176277-67176296 MsG0480022029.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr4 gene 67174150 67178512 67174150 ID=MsG0480022029.01;Name=MsG0480022029.01
Chr4 mRNA 67174150 67178512 67174150 ID=MsG0480022029.01.T01;Parent=MsG0480022029.01;Name=MsG0480022029.01.T01;_AED=0.34;_eAED=0.34;_QI=99|1|1|1|1|1|4|251|770
Chr4 exon 67174150 67174509 67174150 ID=MsG0480022029.01.T01:exon:8146;Parent=MsG0480022029.01.T01
Chr4 exon 67175663 67175935 67175663 ID=MsG0480022029.01.T01:exon:8147;Parent=MsG0480022029.01.T01
Chr4 exon 67176049 67177120 67176049 ID=MsG0480022029.01.T01:exon:8148;Parent=MsG0480022029.01.T01
Chr4 exon 67177555 67178512 67177555 ID=MsG0480022029.01.T01:exon:8149;Parent=MsG0480022029.01.T01
Chr4 five_prime_UTR 67174150 67174248 67174150 ID=MsG0480022029.01.T01:five_prime_utr;Parent=MsG0480022029.01.T01
Chr4 CDS 67174249 67174509 67174249 ID=MsG0480022029.01.T01:cds;Parent=MsG0480022029.01.T01
Chr4 CDS 67175663 67175935 67175663 ID=MsG0480022029.01.T01:cds;Parent=MsG0480022029.01.T01
Chr4 CDS 67176049 67177120 67176049 ID=MsG0480022029.01.T01:cds;Parent=MsG0480022029.01.T01
Chr4 CDS 67177555 67178261 67177555 ID=MsG0480022029.01.T01:cds;Parent=MsG0480022029.01.T01
Chr4 three_prime_UTR 67178262 67178512 67178262 ID=MsG0480022029.01.T01:three_prime_utr;Parent=MsG0480022029.01.T01
Gene Sequence

>MsG0480022029.01.T01

ATGAGTGATCACAACACAGAAAGAAAGATGGGAAGAGTTTGTCATCCATTGTTGAGTGGGGTGAGAGAGGATAGCAAATACAAACATGGATTTTCTGTGGCTGAGATGAAGTCACTAACAAGCATATGTGAGGTTGTGTTGCCTTCATTGCCAATGGATGATGCTCTTAGAAAATATGACATGTCTGATTATGATGAATCAAGCAAGGATGTCCAGTCTTTCTTCAACATTTCTGCTTCTATGTATCCAATCCCTGACGAGGTTGCTGAGATGTTAGTGAAGAGTGGTGTAACAGAAGCAGTAATATTGATAAGGGTGATTCTATGGCTTATATCAACAAGGTTGGGGACTTTGTTGATTTGTGGTTTGCTCTGTCTTAGTAAGAAATGGCCATTTATCCACAACTTCTCAAGCTTGTCTTTGGATAAAAGAGAAAAGATTGTGCAGAGGGCTCTCAAGCTTAGGTTCCTCACTCCTTTTAGACTCGCATTCGCTTACATCAAAGTCCTATGCCTCTTTGTTTTCTTCTCTTGGGTTGATAAAAATGGTGATAATCCGGCATGGAAAGCCATCGGATATGAGGTATCAACAGCTGATGAGAAAATGACCAATGACACCAAAAAGAGACCCCTTGAAAAGGGAATTATAGAAACCATGCATGAACATGACACAACTCTTCAACAATCTCTATCTAACAAAGGCCTCAATGTCACACTTGACTCAAGAAACAACATCCTCAAAATCAAATGTGATGCAGTAGTTGTTGGTTCTGGCTGTGGAGGAGGTGTAGCAGCTTCTGTCCTTTCAAATGCAGGCCACAAAGTGATTGTTCTAGAGAAAGGAAACTATTTTGTTCCCGAAGATTATTCATCACTAGAAGGTCCTTCAATGGACCAACAATATGAAAATGGAGGTATGTTAGCTTCTGTTGATTCAAGAATAGTTATTTTTGCTGGTTCAACAGTAGGTGGTGGTTCAGCTGTTAATTGGTCAGCTTGCATTAAAACACCAGAAAAGGTGTTGAAAGAATGGTCAGAGGAACACAAACTTTCACTATTTGAAAGCATAGAGTATCTATCTGCTATGGAAACTGTGTGTGAGAGGATTGGTGTCAATGAAAATTGTACACAAGAAGGATTCCAAAATCAAGTATTAAGAAAAGGGTGTCAAAATCTTGGCTTAAAAGTTGATTATGTGCCAAGAAATTCACCAGGGAATCATTATTGTGGTTCATGTGGTTATGGTTGTCCAAAAGGAGAGAAACAAGGGACTCAAGTTACATGGCTTGTAGATGCTGTTGAAAAAGGTGCTGTGATCATAACAGGATGCAAAGCTGAGAGATTCTTGTTTGAAAATAATTATAGGAATGCCAATACCAGAAAGAAGAAGAAATGTTTGGGAGTGTTGGCCAAGACTTTAAACAGTAGAATCACAATGAAGCTACAAATTGAGGCCAAAGTGACAATTTCTGCAGGTGGGGCAATTCTTACACCACCATTAATGATCTCTAGTGGTTTAAAGAATAAAAACATTGGTAGGAATCTTCATCTCCATCCTGTACTAATGACATGGGGATACTTCCCAGAATCAAAATCAGATCTCAAAGGTAAAATCTATGAGGGAGGTATAATCACATCTGTCCACAAAGTATCATCATTATTAAATGATCATTCAATATCAGATACAAGAGCAATAATTGAGACACCATTACTAGGACCATCATCATTTGCATCAATATATCCATGGGAATCAGGACTTGACTTCAAACAAAGAATGCTAAAATATCCAAGAACAGCACATTTAATCACAATAATAAGAGACAAAGCAAGTGGACAAGTAAAAACTGAGGGAAGAATAAGCTACAAATTGAATTCAACTGATAGAGAGAATATGAGAGCTGGTTTACAACAAGGACTGAGAATTCTAATAGCAGCAGGAGCTGTTGAAGTAGGAACACACAGAAGTGATGGTCAAAGAATTAAGTGTAATGAGAACACTAGCGAACAGGAAATCGAAGAGTTTATCGATAGTGTTTATCCAATGGAAGGAGCATTGTCACCAGGTGAGAATTGGAATTTGTATACTTCTGCTCATCAAATGGGGAGTTGTAGAATGGGAGTGAATGAAAAGGAAGGTGCTGTTGATGAAAATGGTGAGAGTTGGGAAGCTGAAGGGTTATTTGTTTGTGATGCTAGTGTGCTTCCAACTGCTGTTGGTGTTAACCCTATGATTACTATTCAATCAACTGCATTTTGTATTTCAAATAGGATTGTAGATTTTCTTGGAAAGGGTCAAGAATCAAAAGATTGTTGA

Protein sequence

>MsG0480022029.01.T01

MSDHNTERKMGRVCHPLLSGVREDSKYKHGFSVAEMKSLTSICEVVLPSLPMDDALRKYDMSDYDESSKDVQSFFNISASMYPIPDEVAEMLVKSGVTEAVILIRVILWLISTRLGTLLICGLLCLSKKWPFIHNFSSLSLDKREKIVQRALKLRFLTPFRLAFAYIKVLCLFVFFSWVDKNGDNPAWKAIGYEVSTADEKMTNDTKKRPLEKGIIETMHEHDTTLQQSLSNKGLNVTLDSRNNILKIKCDAVVVGSGCGGGVAASVLSNAGHKVIVLEKGNYFVPEDYSSLEGPSMDQQYENGGMLASVDSRIVIFAGSTVGGGSAVNWSACIKTPEKVLKEWSEEHKLSLFESIEYLSAMETVCERIGVNENCTQEGFQNQVLRKGCQNLGLKVDYVPRNSPGNHYCGSCGYGCPKGEKQGTQVTWLVDAVEKGAVIITGCKAERFLFENNYRNANTRKKKKCLGVLAKTLNSRITMKLQIEAKVTISAGGAILTPPLMISSGLKNKNIGRNLHLHPVLMTWGYFPESKSDLKGKIYEGGIITSVHKVSSLLNDHSISDTRAIIETPLLGPSSFASIYPWESGLDFKQRMLKYPRTAHLITIIRDKASGQVKTEGRISYKLNSTDRENMRAGLQQGLRILIAAGAVEVGTHRSDGQRIKCNENTSEQEIEEFIDSVYPMEGALSPGENWNLYTSAHQMGSCRMGVNEKEGAVDENGESWEAEGLFVCDASVLPTAVGVNPMITIQSTAFCISNRIVDFLGKGQESKDC*