AlfalfaGEDB | MsG0680030366.01

M. sativa cultivar ZhongmuNo.1 / MsG0680030366.01

KEGG: K02961
GO: GO:0003735 GO:0005622 GO:0005840 GO:0006412
PFAM: PF00366

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680030366.01.T02	XP_003604547.2	94.34	106	3	1	1	106	1	103	4.55E-64	199
MsG0680030366.01.T03	XP_003604547.2	87.302	63	8	0	1	63	1	63	1.16E-31	115
MsG0680030366.01.T01	XP_003604547.2	97.087	103	3	0	1	103	1	103	2.91E-66	204

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680030366.01.T01	A7HM43	52.381	84	40	0	2	85	4	87	6.23E-27	98.2
MsG0680030366.01.T02	A7HM43	50.575	87	40	1	2	88	4	87	1.00E-25	95.1
MsG0680030366.01.T03	A1ALV0	56.897	58	25	0	6	63	12	69	8.83E-19	75.1

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680030366.01.T01	G7JKN8	97.087	103	3	1	103	1	103	1.39e-66	204
MsG0680030366.01.T03	G7JKN8	87.302	63	8	1	63	1	63	5.52e-32	115
MsG0680030366.01.T03	G7KPZ7	83.333	66	11	1	66	52	117	1.82e-31	116

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047869.01	MsG0680030366.01	0.827874	1.229515e-54	1.202131e-51
MsG0180001886.01	MsG0680030366.01	0.802240	6.162730e-49	3.003603e-46
MsG0180002089.01	MsG0680030366.01	0.834481	2.923886e-56	3.474405e-53
MsG0180003671.01	MsG0680030366.01	0.816275	6.012981e-52	4.241977e-49
MsG0180003864.01	MsG0680030366.01	0.810192	1.302297e-50	7.799053e-48
MsG0180004388.01	MsG0680030366.01	0.802230	6.192351e-49	3.017241e-46
MsG0180004426.01	MsG0680030366.01	0.807344	5.292710e-50	2.940749e-47
MsG0180005668.01	MsG0680030366.01	0.820598	6.303117e-53	5.008986e-50
MsG0180006016.01	MsG0680030366.01	0.817749	2.805962e-52	2.061039e-49
MsG0180006138.01	MsG0680030366.01	0.811019	8.630946e-51	5.284305e-48
MsG0280011032.01	MsG0680030366.01	0.828482	8.774085e-55	8.732371e-52
MsG0280011141.01	MsG0680030366.01	0.812859	3.430148e-51	2.205098e-48
MsG0280011156.01	MsG0680030366.01	0.803411	3.530486e-49	1.772943e-46
MsG0280011446.01	MsG0680030366.01	0.807705	4.436492e-50	2.488239e-47
MsG0380011870.01	MsG0680030366.01	0.833965	3.939073e-56	4.609010e-53
MsG0380014142.01	MsG0680030366.01	0.805556	1.260643e-49	6.689617e-47
MsG0480018906.01	MsG0680030366.01	0.825048	5.797490e-54	5.226327e-51
MsG0480018970.01	MsG0680030366.01	0.813834	2.094602e-51	1.382594e-48
MsG0480020521.01	MsG0680030366.01	0.800866	1.178901e-48	5.549297e-46
MsG0480021464.01	MsG0680030366.01	0.840748	7.213239e-58	1.037395e-54
MsG0480023088.01	MsG0680030366.01	0.804389	2.211873e-49	1.138982e-46
MsG0480023427.01	MsG0680030366.01	0.811041	8.538316e-51	5.230366e-48
MsG0480023707.01	MsG0680030366.01	0.805935	1.049610e-49	5.624470e-47
MsG0580025448.01	MsG0680030366.01	0.805854	1.091906e-49	5.839144e-47
MsG0580025638.01	MsG0680030366.01	0.801881	7.305624e-49	3.528367e-46
MsG0380015146.01	MsG0680030366.01	0.822827	1.923143e-53	1.627677e-50
MsG0380016475.01	MsG0680030366.01	0.813397	2.612674e-51	1.704359e-48
MsG0380016581.01	MsG0680030366.01	0.820666	6.080918e-53	4.841599e-50
MsG0380016624.01	MsG0680030366.01	0.806726	7.151138e-50	3.910175e-47
MsG0380017040.01	MsG0680030366.01	0.815789	7.720046e-52	5.374459e-49
MsG0380017680.01	MsG0680030366.01	0.807599	4.672057e-50	2.613013e-47
MsG0480018110.01	MsG0680030366.01	0.817617	3.005452e-52	2.199411e-49
MsG0580027344.01	MsG0680030366.01	0.802626	5.131490e-49	2.525717e-46
MsG0680030316.01	MsG0680030366.01	0.805598	1.235742e-49	6.564478e-47
MsG0680030351.01	MsG0680030366.01	0.805530	1.277018e-49	6.771833e-47
MsG0680030366.01	MsG0680030667.01	0.829588	4.733300e-55	4.865676e-52
MsG0680030366.01	MsG0680031355.01	0.817478	3.229888e-52	2.354856e-49
MsG0680030366.01	MsG0680033792.01	0.816597	5.095947e-52	3.626543e-49
MsG0680030366.01	MsG0680035444.01	0.804706	1.899193e-49	9.860355e-47
MsG0680030366.01	MsG0680035582.01	0.815842	7.513568e-52	5.237624e-49
MsG0680030366.01	MsG0780040596.01	0.821397	4.126491e-53	3.353342e-50
MsG0680030366.01	MsG0880041836.01	0.817553	3.106436e-52	2.269410e-49
MsG0680030366.01	MsG0880042294.01	0.823460	1.368958e-53	1.179402e-50
MsG0680030366.01	MsG0880042314.01	0.810242	1.270679e-50	7.619956e-48
MsG0680030366.01	MsG0880042404.01	0.805133	1.546329e-49	8.117201e-47
MsG0680030366.01	MsG0880044574.01	0.808052	3.742798e-50	2.118356e-47
MsG0680030366.01	MsG0880045937.01	0.804028	2.628703e-49	1.341201e-46
MsG0680030366.01	MsG0880046973.01	0.807378	5.205038e-50	2.894641e-47
MsG0280006456.01	MsG0680030366.01	0.802271	6.072247e-49	2.961881e-46
MsG0280006595.01	MsG0680030366.01	0.816929	4.291671e-52	3.082217e-49
MsG0280007547.01	MsG0680030366.01	0.809082	2.255178e-50	1.311571e-47
MsG0280008182.01	MsG0680030366.01	0.807902	4.028779e-50	2.271099e-47
MsG0280008885.01	MsG0680030366.01	0.813497	2.484135e-51	1.624925e-48
MsG0280009646.01	MsG0680030366.01	0.801508	8.710350e-49	4.167167e-46
MsG0280010443.01	MsG0680030366.01	0.800825	1.201513e-48	5.649695e-46

PPI

Gene1	Gene2	Type
MsG0080049159.01	MsG0680030366.01	PPI
MsG0680030366.01	MsG0080049159.01	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680030366.01.T02	MTR_4g014360	94.340	106	3	1	1	106	1	103	5.51e-68	199
MsG0680030366.01.T02	MTR_6g005030	92.453	106	5	1	1	106	52	154	4.70e-65	193
MsG0680030366.01.T03	MTR_4g014360	87.302	63	8	0	1	63	1	63	1.40e-35	115
MsG0680030366.01.T03	MTR_6g005030	83.333	66	11	0	1	66	52	117	4.63e-35	116
MsG0680030366.01.T01	MTR_4g014360	97.087	103	3	0	1	103	1	103	3.52e-70	204
MsG0680030366.01.T01	MTR_6g005030	95.146	103	5	0	1	103	52	154	3.72e-67	199

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0680030366.01.T02	AT3G18880	65.138	109	31	3	1	106	1	105	1.87e-43	137
MsG0680030366.01.T02	AT3G18880	65.138	109	31	3	1	106	1	105	1.87e-43	137
MsG0680030366.01.T02	AT1G49400	76.190	84	17	1	1	84	1	81	8.83e-43	136
MsG0680030366.01.T03	AT1G49400	69.841	63	19	0	1	63	1	63	8.35e-28	96.7
MsG0680030366.01.T03	AT3G18880	68.254	63	20	0	1	63	1	63	1.45e-26	93.2
MsG0680030366.01.T03	AT3G18880	68.254	63	20	0	1	63	1	63	1.45e-26	93.2
MsG0680030366.01.T01	AT3G18880	66.981	106	31	2	1	103	1	105	1.22e-45	142
MsG0680030366.01.T01	AT3G18880	66.981	106	31	2	1	103	1	105	1.22e-45	142
MsG0680030366.01.T01	AT1G49400	79.012	81	17	0	1	81	1	81	6.89e-45	141
MsG0680030366.01.T01	AT1G79850	38.462	78	48	0	1	78	50	127	9.99e-12	57.8

Find 16 sgRNAs with CRISPR-Local

Find 79 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TAAACGCACTTCCAAGTTTA+TGG	0.116836	6:+1125995	MsG0680030366.01.T01:CDS
AATACATATTCATCTGAATT+AGG	0.136683	6:+1125843	MsG0680030366.01.T01:five_prime_UTR
ATACATATTCATCTGAATTA+GGG	0.300965	6:+1125844	MsG0680030366.01.T01:five_prime_UTR
TGGAAGTGCGTTTAATATAT+CGG	0.349128	6:-1125986	None:intergenic
CATCTGAATTAGGGTTTGTT+GGG	0.369331	6:+1125853	MsG0680030366.01.T01:five_prime_UTR
TCATCTGAATTAGGGTTTGT+TGG	0.386146	6:+1125852	MsG0680030366.01.T01:five_prime_UTR
GAATTAGGGTTTGTTGGGAT+TGG	0.391008	6:+1125858	MsG0680030366.01.T01:five_prime_UTR
TAACATCACCGGTAAAAGAT+AGG	0.434833	6:-1126077	None:intergenic
TTCGAATAAGATGCAGAAAT+CGG	0.439794	6:+1125920	MsG0680030366.01.T01:CDS
GAGAAGATGAAGCAAGTAGT+AGG	0.480871	6:+1125888	MsG0680030366.01.T01:exon
GATGAAGCAAGTAGTAGGAA+TGG	0.481818	6:+1125893	MsG0680030366.01.T01:exon
TTCATCACGAGCCATAAACT+TGG	0.510999	6:-1126006	None:intergenic
TAAGATGCAGAAATCGGTTG+TGG	0.553827	6:+1125926	MsG0680030366.01.T01:CDS
GAAGCAAGTAGTAGGAATGG+TGG	0.579237	6:+1125896	MsG0680030366.01.T01:CDS
GAAAACAATCTTTGCAACAT+CGG	0.608322	6:+1126026	MsG0680030366.01.T01:CDS
AATTATTCACAATACTAACT+CGG	0.640432	6:-1126052	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	TTTTTTTTTTTTTTTTGTGG+TGG	-	Chr6:1126287-1126306	None:intergenic	15.0%
!!	AATACATATTCATCTGAATT+AGG	+	Chr6:1125843-1125862	MsG0680030366.01.T01:five_prime_UTR	20.0%
!!	AATTATTCACAATACTAACT+CGG	-	Chr6:1126055-1126074	None:intergenic	20.0%
!!	AGGTATTATAAAGTTAATCT+TGG	+	Chr6:1126605-1126624	MsG0680030366.01.T01:intron	20.0%
!!	ATACATATTCATCTGAATTA+GGG	+	Chr6:1125844-1125863	MsG0680030366.01.T01:five_prime_UTR	20.0%
!!!	ATAATTTACCTATCTTTTAC+CGG	+	Chr6:1126069-1126088	MsG0680030366.01.T01:intron	20.0%
!	CTATAATTCATTAGCACAAA+TGG	-	Chr6:1127006-1127025	None:intergenic	25.0%
	AGACAACAATTTGTGCTAAA+CGG	-	Chr6:1126161-1126180	None:intergenic	30.0%
	CAAATTTATGACGTAGATGT+AGG	-	Chr6:1126581-1126600	None:intergenic	30.0%
	GAAAACAATCTTTGCAACAT+CGG	+	Chr6:1126026-1126045	MsG0680030366.01.T01:CDS	30.0%
	GACAATGCATAATATATGCA+AGG	+	Chr6:1126242-1126261	MsG0680030366.01.T01:intron	30.0%
	GCTACAAATGAGTATCATAT+TGG	-	Chr6:1126765-1126784	None:intergenic	30.0%
	GTGCTAATGAATTATAGTGT+AGG	+	Chr6:1127009-1127028	MsG0680030366.01.T01:three_prime_UTR	30.0%
	TGGAATTGGAAATGAAGTTT+AGG	+	Chr6:1126669-1126688	MsG0680030366.01.T01:intron	30.0%
	TTCGAATAAGATGCAGAAAT+CGG	+	Chr6:1125920-1125939	MsG0680030366.01.T01:CDS	30.0%
!	ATAAGTGTCTTGTGCAATTT+TGG	+	Chr6:1126357-1126376	MsG0680030366.01.T01:intron	30.0%
!	TAATGGAATGGTAATTTTCG+TGG	+	Chr6:1126844-1126863	MsG0680030366.01.T01:intron	30.0%
!	TGGAAGTGCGTTTAATATAT+CGG	-	Chr6:1125989-1126008	None:intergenic	30.0%
!	TTGTAGCAACTTCTAGTTAT+TGG	+	Chr6:1126778-1126797	MsG0680030366.01.T01:intron	30.0%
!!	TATATCGGTTGAACATTTTG+TGG	-	Chr6:1125974-1125993	None:intergenic	30.0%
!!!	TTTGAACAAACTGCTGTTTT+TGG	+	Chr6:1126326-1126345	MsG0680030366.01.T01:intron	30.0%
!!!	TTTTGGATTTGCTGTGTTAT+TGG	+	Chr6:1126374-1126393	MsG0680030366.01.T01:intron	30.0%
!!!	TTTTTTTTTTTTGTGGTGGC+CGG	-	Chr6:1126283-1126302	None:intergenic	30.0%
	CATAATATATGCAAGGTCTG+GGG	+	Chr6:1126249-1126268	MsG0680030366.01.T01:intron	35.0%
	GCATAATATATGCAAGGTCT+GGG	+	Chr6:1126248-1126267	MsG0680030366.01.T01:intron	35.0%
	TAAACGCACTTCCAAGTTTA+TGG	+	Chr6:1125995-1126014	MsG0680030366.01.T01:CDS	35.0%
	TAACATCACCGGTAAAAGAT+AGG	-	Chr6:1126080-1126099	None:intergenic	35.0%
	TATATGCACTAGACTACAGT+CGG	-	Chr6:1126717-1126736	None:intergenic	35.0%
	TCATCTGAATTAGGGTTTGT+TGG	+	Chr6:1125852-1125871	MsG0680030366.01.T01:five_prime_UTR	35.0%
	TCCATTATATTCAGCAGCAT+GGG	-	Chr6:1126831-1126850	None:intergenic	35.0%
	TGCATAATATATGCAAGGTC+TGG	+	Chr6:1126247-1126266	MsG0680030366.01.T01:intron	35.0%
	TTCCATTATATTCAGCAGCA+TGG	-	Chr6:1126832-1126851	None:intergenic	35.0%
!	CATCTGAATTAGGGTTTGTT+GGG	+	Chr6:1125853-1125872	MsG0680030366.01.T01:five_prime_UTR	35.0%
!	CTACGTCATAAATTTGCTCA+AGG	+	Chr6:1126585-1126604	MsG0680030366.01.T01:intron	35.0%
!	TGCTGCTGAATATAATGGAA+TGG	+	Chr6:1126832-1126851	MsG0680030366.01.T01:intron	35.0%
!	TTTAGGTTTAGTTGAGTGAG+AGG	+	Chr6:1126686-1126705	MsG0680030366.01.T01:intron	35.0%
!	TTTTAATGTGGCATGTTCCA+AGG	+	Chr6:1126876-1126895	MsG0680030366.01.T01:three_prime_UTR	35.0%
!!!	TTTTTTTTTTTGTGGTGGCC+GGG	-	Chr6:1126282-1126301	None:intergenic	35.0%
	AGGTTCGATTGGATTCTTCT+AGG	+	Chr6:1126444-1126463	MsG0680030366.01.T01:intron	40.0%
	ATATGTTTCTCCCTCTGCAA+CGG	+	Chr6:1126523-1126542	MsG0680030366.01.T01:CDS	40.0%
	CTGCAACTTCAGTTGACATA+AGG	+	Chr6:1126938-1126957	MsG0680030366.01.T01:three_prime_UTR	40.0%
	GAGAAGATGAAGCAAGTAGT+AGG	+	Chr6:1125888-1125907	MsG0680030366.01.T01:exon	40.0%
	GATGAAGCAAGTAGTAGGAA+TGG	+	Chr6:1125893-1125912	MsG0680030366.01.T01:exon	40.0%
	TAAGATGCAGAAATCGGTTG+TGG	+	Chr6:1125926-1125945	MsG0680030366.01.T01:CDS	40.0%
	TCCCATGCTGCTGAATATAA+TGG	+	Chr6:1126827-1126846	MsG0680030366.01.T01:intron	40.0%
	TCTGAGCAAGCGTAAACATT+GGG	+	Chr6:1126469-1126488	MsG0680030366.01.T01:CDS	40.0%
	TTACCGGTGATGTTAAACAG+CGG	+	Chr6:1126085-1126104	MsG0680030366.01.T01:intron	40.0%
	TTCATCACGAGCCATAAACT+TGG	-	Chr6:1126009-1126028	None:intergenic	40.0%
	TTGGTGTATGGAAGTGGAAT+TGG	+	Chr6:1126655-1126674	MsG0680030366.01.T01:intron	40.0%
!	ATACACCAACCTCTAAAAGC+TGG	-	Chr6:1126644-1126663	None:intergenic	40.0%
!	ATCGGTTGAACATTTTGTGG+TGG	-	Chr6:1125971-1125990	None:intergenic	40.0%
!	TACACCAACCTCTAAAAGCT+GGG	-	Chr6:1126643-1126662	None:intergenic	40.0%
!!	CTTGTCATTTCAGGTTCGAT+TGG	+	Chr6:1126433-1126452	MsG0680030366.01.T01:intron	40.0%
!!	GAATTAGGGTTTGTTGGGAT+TGG	+	Chr6:1125858-1125877	MsG0680030366.01.T01:five_prime_UTR	40.0%
!!	GCTTTTGTGCTTGTCATTTC+AGG	+	Chr6:1126424-1126443	MsG0680030366.01.T01:intron	40.0%
!!	GGGTTAGCTTGTATGTTGAT+GGG	+	Chr6:1126901-1126920	MsG0680030366.01.T01:three_prime_UTR	40.0%
!!	TGGCAGGACGAATTTTAATG+TGG	+	Chr6:1126864-1126883	MsG0680030366.01.T01:intron	40.0%
!!	TGGGTTAGCTTGTATGTTGA+TGG	+	Chr6:1126900-1126919	MsG0680030366.01.T01:three_prime_UTR	40.0%
!!!	AGCTTTTAGAGGTTGGTGTA+TGG	+	Chr6:1126643-1126662	MsG0680030366.01.T01:intron	40.0%
	AATGTGGCATGTTCCAAGGT+TGG	+	Chr6:1126880-1126899	MsG0680030366.01.T01:three_prime_UTR	45.0%
	ATGTGGCATGTTCCAAGGTT+GGG	+	Chr6:1126881-1126900	MsG0680030366.01.T01:three_prime_UTR	45.0%
	CAATGTTTACGCTTGCTCAG+AGG	-	Chr6:1126470-1126489	None:intergenic	45.0%
	CATACAAGCTAACCCAACCT+TGG	-	Chr6:1126896-1126915	None:intergenic	45.0%
	CTCTGAGCAAGCGTAAACAT+TGG	+	Chr6:1126468-1126487	MsG0680030366.01.T01:CDS	45.0%
	GAAGCAAGTAGTAGGAATGG+TGG	+	Chr6:1125896-1125915	MsG0680030366.01.T01:CDS	45.0%
	GCACAAATTGTTGTCTCCAG+TGG	+	Chr6:1126165-1126184	MsG0680030366.01.T01:intron	45.0%
!	AATAGTGCTGCTATAGCCAC+TGG	-	Chr6:1126184-1126203	None:intergenic	45.0%
!	GAGAGTTACCCAGCTTTTAG+AGG	+	Chr6:1126632-1126651	MsG0680030366.01.T01:intron	45.0%
!	GGAATGGTAATTTTCGTGGC+AGG	+	Chr6:1126848-1126867	MsG0680030366.01.T01:intron	45.0%
!!	GTTACCCAGCTTTTAGAGGT+TGG	+	Chr6:1126636-1126655	MsG0680030366.01.T01:intron	45.0%
!!	TAGAGGTTGGTGTATGGAAG+TGG	+	Chr6:1126649-1126668	MsG0680030366.01.T01:intron	45.0%
!!!	TTTTTTTTTTTTTTTTTTTG+TGG	-	Chr6:1126290-1126309	None:intergenic	5.0%
	AATGCGAGCTCGAACTCTGT+AGG	+	Chr6:1126554-1126573	MsG0680030366.01.T01:CDS	50.0%
	ATTCTCAGACACCGTTGCAG+AGG	-	Chr6:1126537-1126556	None:intergenic	50.0%
	TTCTCAGACACCGTTGCAGA+GGG	-	Chr6:1126536-1126555	None:intergenic	50.0%
	CCAACTGAGCTAAGCTCACG+AGG	-	Chr6:1126218-1126237	None:intergenic	55.0%
	CCTCGTGAGCTTAGCTCAGT+TGG	+	Chr6:1126215-1126234	MsG0680030366.01.T01:intron	55.0%
	GCGCCGCTGTTTAACATCAC+CGG	-	Chr6:1126091-1126110	None:intergenic	55.0%
!	AAGGTCTGGGGTTCGAATCC+CGG	+	Chr6:1126261-1126280	MsG0680030366.01.T01:intron	55.0%

Chromosome	Type	Strat	End	Strand	Name
Chr6	gene	1125836	1127100	1125836	ID=MsG0680030366.01;Name=MsG0680030366.01
Chr6	mRNA	1125836	1127100	1125836	ID=MsG0680030366.01.T01;Parent=MsG0680030366.01;Name=MsG0680030366.01.T01;_AED=0.41;_eAED=0.41;_QI=58\|1\|1\|1\|0\|0\|3\|242\|103
Chr6	exon	1125836	1126055	1125836	ID=MsG0680030366.01.T01:exon:2398;Parent=MsG0680030366.01.T01
Chr6	five_prime_UTR	1125836	1125893	1125836	ID=MsG0680030366.01.T01:five_prime_utr;Parent=MsG0680030366.01.T01
Chr6	CDS	1125894	1126055	1125894	ID=MsG0680030366.01.T01:cds;Parent=MsG0680030366.01.T01
Chr6	CDS	1126446	1126595	1126446	ID=MsG0680030366.01.T01:cds;Parent=MsG0680030366.01.T01
Chr6	three_prime_UTR	1126596	1126606	1126596	ID=MsG0680030366.01.T01:three_prime_utr;Parent=MsG0680030366.01.T01
Chr6	three_prime_UTR	1126870	1127100	1126870	ID=MsG0680030366.01.T01:three_prime_utr;Parent=MsG0680030366.01.T01
Chr6	mRNA	1125894	1127100	1125894	ID=MsG0680030366.01.T02;Parent=MsG0680030366.01;Name=MsG0680030366.01.T02;_AED=0.42;_eAED=0.42;_QI=0\|0.5\|0.66\|1\|0\|0\|3\|242\|106
Chr6	exon	1125894	1126064	1125894	ID=MsG0680030366.01.T02:exon:2401;Parent=MsG0680030366.01.T02
Chr6	CDS	1125894	1126064	1125894	ID=MsG0680030366.01.T02:cds;Parent=MsG0680030366.01.T02
Chr6	CDS	1126446	1126595	1126446	ID=MsG0680030366.01.T02:cds;Parent=MsG0680030366.01.T02
Chr6	three_prime_UTR	1126596	1126606	1126596	ID=MsG0680030366.01.T02:three_prime_utr;Parent=MsG0680030366.01.T02
Chr6	three_prime_UTR	1126870	1127100	1126870	ID=MsG0680030366.01.T02:three_prime_utr;Parent=MsG0680030366.01.T02
Chr6	mRNA	1125894	1126094	1125894	ID=MsG0680030366.01.T03;Parent=MsG0680030366.01;Name=MsG0680030366.01.T03;_AED=0.47;_eAED=0.47;_QI=0\|-1\|0\|1\|-1\|0\|1\|0\|66
Chr6	exon	1125894	1126094	1125894	ID=MsG0680030366.01.T03:exon:2402;Parent=MsG0680030366.01.T03
Chr6	CDS	1125894	1126094	1125894	ID=MsG0680030366.01.T03:cds;Parent=MsG0680030366.01.T03

Gene Sequence

>MsG0680030366.01.T02

ATGAAGCAAGTAGTAGGAATGGTGGTTTCGAATAAGATGCAGAAATCGGTTGTGGTAGCAGTTGATAGATTGTTCCACCACAAAATGTTCAACCGATATATTAAACGCACTTCCAAGTTTATGGCTCGTGATGAAAACAATCTTTGCAACATCGGTGACCGAGTTAGTATTGTTCGATTGGATTCTTCTAGGCCTCTGAGCAAGCGTAAACATTGGGTTGTTGCTGAAATTCTCAAGAAAGCACGCATATATGTTTCTCCCTCTGCAACGGTGTCTGAGAATGCGAGCTCGAACTCTGTAGGACCTACATCTACGTCATAA

>MsG0680030366.01.T03

>MsG0680030366.01.T01

ATGAAGCAAGTAGTAGGAATGGTGGTTTCGAATAAGATGCAGAAATCGGTTGTGGTAGCAGTTGATAGATTGTTCCACCACAAAATGTTCAACCGATATATTAAACGCACTTCCAAGTTTATGGCTCGTGATGAAAACAATCTTTGCAACATCGGTGACCGAGTTCGATTGGATTCTTCTAGGCCTCTGAGCAAGCGTAAACATTGGGTTGTTGCTGAAATTCTCAAGAAAGCACGCATATATGTTTCTCCCTCTGCAACGGTGTCTGAGAATGCGAGCTCGAACTCTGTAGGACCTACATCTACGTCATAA

Protein sequence

>MsG0680030366.01.T02

MKQVVGMVVSNKMQKSVVVAVDRLFHHKMFNRYIKRTSKFMARDENNLCNIGDRVSIVRLDSSRPLSKRKHWVVAEILKKARIYVSPSATVSENASSNSVGPTSTS*

>MsG0680030366.01.T03

MKQVVGMVVSNKMQKSVVVAVDRLFHHKMFNRYIKRTSKFMARDENNLCNIGDRVSIVNNLPIFYR*

>MsG0680030366.01.T01

MKQVVGMVVSNKMQKSVVVAVDRLFHHKMFNRYIKRTSKFMARDENNLCNIGDRVRLDSSRPLSKRKHWVVAEILKKARIYVSPSATVSENASSNSVGPTSTS*