Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033792.01.T01 | XP_013452347.2 | 50 | 140 | 20 | 3 | 26 | 116 | 45 | 183 | 1.64E-24 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033792.01.T01 | Q9FLX7 | 61.111 | 72 | 27 | 1 | 14 | 85 | 33 | 103 | 1.03E-17 | 77 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033792.01.T01 | I3SP15 | 50.000 | 140 | 20 | 3 | 26 | 116 | 45 | 183 | 7.82e-25 | 102 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047869.01 | MsG0680033792.01 | 0.808840 | 2.540823e-50 | 1.468090e-47 |
| MsG0080047959.01 | MsG0680033792.01 | 0.803660 | 3.135797e-49 | 1.584767e-46 |
| MsG0080048764.01 | MsG0680033792.01 | 0.805467 | 1.316520e-49 | 6.970306e-47 |
| MsG0080048856.01 | MsG0680033792.01 | 0.807822 | 4.188378e-50 | 2.356281e-47 |
| MsG0180000065.01 | MsG0680033792.01 | 0.811971 | 5.361607e-51 | 3.366110e-48 |
| MsG0180000195.01 | MsG0680033792.01 | 0.802132 | 6.485436e-49 | 3.152217e-46 |
| MsG0180000334.01 | MsG0680033792.01 | 0.802463 | 5.544136e-49 | 2.717520e-46 |
| MsG0180000470.01 | MsG0680033792.01 | 0.835190 | 1.938585e-56 | 2.353029e-53 |
| MsG0180000607.01 | MsG0680033792.01 | 0.810698 | 1.012857e-50 | 6.148099e-48 |
| MsG0180000828.01 | MsG0680033792.01 | 0.806092 | 9.730036e-50 | 5.234862e-47 |
| MsG0180001141.01 | MsG0680033792.01 | 0.809930 | 1.483108e-50 | 8.821886e-48 |
| MsG0180001381.01 | MsG0680033792.01 | 0.803699 | 3.077616e-49 | 1.556967e-46 |
| MsG0180002089.01 | MsG0680033792.01 | 0.832458 | 9.343512e-56 | 1.044958e-52 |
| MsG0180002282.01 | MsG0680033792.01 | 0.809831 | 1.557427e-50 | 9.240096e-48 |
| MsG0180002482.01 | MsG0680033792.01 | 0.807702 | 4.442417e-50 | 2.491359e-47 |
| MsG0180002492.01 | MsG0680033792.01 | 0.801873 | 7.329960e-49 | 3.539479e-46 |
| MsG0180002870.01 | MsG0680033792.01 | 0.803850 | 2.863265e-49 | 1.454228e-46 |
| MsG0180003669.01 | MsG0680033792.01 | 0.839583 | 1.452893e-57 | 2.015255e-54 |
| MsG0180003854.01 | MsG0680033792.01 | 0.800874 | 1.174442e-48 | 5.529519e-46 |
| MsG0180004149.01 | MsG0680033792.01 | 0.817161 | 3.806685e-52 | 2.751323e-49 |
| MsG0180004264.01 | MsG0680033792.01 | 0.812897 | 3.364014e-51 | 2.164888e-48 |
| MsG0180004996.01 | MsG0680033792.01 | 0.804349 | 2.254491e-49 | 1.159760e-46 |
| MsG0180005371.01 | MsG0680033792.01 | 0.808745 | 2.663263e-50 | 1.534999e-47 |
| MsG0180005664.01 | MsG0680033792.01 | 0.808104 | 3.648576e-50 | 2.067891e-47 |
| MsG0180005954.01 | MsG0680033792.01 | 0.814458 | 1.525036e-51 | 1.023843e-48 |
| MsG0180006023.01 | MsG0680033792.01 | 0.806957 | 6.392164e-50 | 3.516029e-47 |
| MsG0180006144.01 | MsG0680033792.01 | 0.830908 | 2.252956e-55 | 2.406878e-52 |
| MsG0280006324.01 | MsG0680033792.01 | 0.807774 | 4.289861e-50 | 2.410319e-47 |
| MsG0280010551.01 | MsG0680033792.01 | 0.819792 | 9.640656e-53 | 7.492964e-50 |
| MsG0280010796.01 | MsG0680033792.01 | 0.806512 | 7.935484e-50 | 4.315297e-47 |
| MsG0280011014.01 | MsG0680033792.01 | 0.803353 | 3.630777e-49 | 1.820463e-46 |
| MsG0280011032.01 | MsG0680033792.01 | 0.810127 | 1.344927e-50 | 8.041146e-48 |
| MsG0280011070.01 | MsG0680033792.01 | 0.804943 | 1.694259e-49 | 8.850990e-47 |
| MsG0280011156.01 | MsG0680033792.01 | 0.818816 | 1.608500e-52 | 1.216633e-49 |
| MsG0280011176.01 | MsG0680033792.01 | 0.803422 | 3.512001e-49 | 1.764170e-46 |
| MsG0280011388.01 | MsG0680033792.01 | 0.806470 | 8.098611e-50 | 4.399364e-47 |
| MsG0380011755.01 | MsG0680033792.01 | 0.804179 | 2.446223e-49 | 1.252894e-46 |
| MsG0380011870.01 | MsG0680033792.01 | 0.813085 | 3.060128e-51 | 1.979159e-48 |
| MsG0380014573.01 | MsG0680033792.01 | 0.835963 | 1.235869e-56 | 1.535186e-53 |
| MsG0380014647.01 | MsG0680033792.01 | 0.815902 | 7.284929e-52 | 5.086650e-49 |
| MsG0380014770.01 | MsG0680033792.01 | 0.804808 | 1.808534e-49 | 9.414866e-47 |
| MsG0680031628.01 | MsG0680033792.01 | 0.805515 | 1.286085e-49 | 6.817343e-47 |
| MsG0680031967.01 | MsG0680033792.01 | 0.806174 | 9.350563e-50 | 5.041322e-47 |
| MsG0680032203.01 | MsG0680033792.01 | 0.828285 | 9.786981e-55 | 9.684365e-52 |
| MsG0680032801.01 | MsG0680033792.01 | 0.821551 | 3.802393e-53 | 3.103259e-50 |
| MsG0680032844.01 | MsG0680033792.01 | 0.804903 | 1.727920e-49 | 9.017550e-47 |
| MsG0680032996.01 | MsG0680033792.01 | 0.802979 | 4.338238e-49 | 2.154472e-46 |
| MsG0680033228.01 | MsG0680033792.01 | 0.825087 | 5.673508e-54 | 5.120310e-51 |
| MsG0680033379.01 | MsG0680033792.01 | 0.831495 | 1.615967e-55 | 1.756593e-52 |
| MsG0680033792.01 | MsG0680035346.01 | 0.823731 | 1.182642e-53 | 1.026932e-50 |
| MsG0680033792.01 | MsG0680035475.01 | 0.816084 | 6.636957e-52 | 4.657692e-49 |
| MsG0680033792.01 | MsG0680035573.01 | 0.803401 | 3.548069e-49 | 1.781334e-46 |
| MsG0680033792.01 | MsG0680035704.01 | 0.812111 | 4.996540e-51 | 3.148907e-48 |
| MsG0680033792.01 | MsG0780035948.01 | 0.825873 | 3.696623e-54 | 3.411604e-51 |
| MsG0680033792.01 | MsG0780036477.01 | 0.807749 | 4.342586e-50 | 2.438408e-47 |
| MsG0680033792.01 | MsG0780036719.01 | 0.808212 | 3.460223e-50 | 1.966827e-47 |
| MsG0680033792.01 | MsG0780037457.01 | 0.802981 | 4.335170e-49 | 2.153034e-46 |
| MsG0680033792.01 | MsG0780038386.01 | 0.807879 | 4.073047e-50 | 2.294748e-47 |
| MsG0680033792.01 | MsG0780038827.01 | 0.818412 | 1.986745e-52 | 1.486227e-49 |
| MsG0680033792.01 | MsG0780039423.01 | 0.816393 | 5.658925e-52 | 4.004944e-49 |
| MsG0680033792.01 | MsG0780040057.01 | 0.806388 | 8.426456e-50 | 4.567741e-47 |
| MsG0680033792.01 | MsG0780040576.01 | -0.811900 | 5.555407e-51 | 3.481001e-48 |
| MsG0680033792.01 | MsG0780040596.01 | 0.825663 | 4.145609e-54 | 3.803039e-51 |
| MsG0680033792.01 | MsG0780040704.01 | 0.804944 | 1.694145e-49 | 8.850407e-47 |
| MsG0680033792.01 | MsG0780040858.01 | 0.820596 | 6.310852e-53 | 5.014893e-50 |
| MsG0680033792.01 | MsG0780040872.01 | 0.800864 | 1.180103e-48 | 5.554680e-46 |
| MsG0680033792.01 | MsG0780041456.01 | 0.811963 | 5.382420e-51 | 3.378431e-48 |
| MsG0680033792.01 | MsG0780041559.01 | 0.810872 | 9.286807e-51 | 5.663429e-48 |
| MsG0680033792.01 | MsG0880042065.01 | 0.802754 | 4.827927e-49 | 2.384166e-46 |
| MsG0680033792.01 | MsG0880042232.01 | 0.804475 | 2.122074e-49 | 1.095170e-46 |
| MsG0680033792.01 | MsG0880042294.01 | 0.824073 | 9.832578e-54 | 8.619167e-51 |
| MsG0680033792.01 | MsG0880042314.01 | 0.807399 | 5.151757e-50 | 2.866614e-47 |
| MsG0680033792.01 | MsG0880042404.01 | 0.817580 | 3.062658e-52 | 2.239084e-49 |
| MsG0680033792.01 | MsG0880042779.01 | 0.807829 | 4.174390e-50 | 2.348818e-47 |
| MsG0680033792.01 | MsG0880042800.01 | 0.821732 | 3.452644e-53 | 2.832222e-50 |
| MsG0680033792.01 | MsG0880042966.01 | 0.828461 | 8.876979e-55 | 8.829631e-52 |
| MsG0680033792.01 | MsG0880043479.01 | 0.801036 | 1.088193e-48 | 5.144674e-46 |
| MsG0680033792.01 | MsG0880044079.01 | 0.807517 | 4.862964e-50 | 2.714235e-47 |
| MsG0680033792.01 | MsG0880044415.01 | 0.855286 | 6.985329e-62 | 1.604634e-58 |
| MsG0680033792.01 | MsG0880044416.01 | 0.802335 | 5.890478e-49 | 2.877982e-46 |
| MsG0680033792.01 | MsG0880044510.01 | 0.816413 | 5.601215e-52 | 3.966170e-49 |
| MsG0680033792.01 | MsG0880044542.01 | 0.831674 | 1.460026e-55 | 1.595588e-52 |
| MsG0680033792.01 | MsG0880044554.01 | 0.828819 | 7.271374e-55 | 7.307687e-52 |
| MsG0680033792.01 | MsG0880044574.01 | 0.830796 | 2.399640e-55 | 2.555039e-52 |
| MsG0680033792.01 | MsG0880045583.01 | 0.815610 | 8.463846e-52 | 5.863539e-49 |
| MsG0680033792.01 | MsG0880045653.01 | 0.835850 | 1.319868e-56 | 1.634010e-53 |
| MsG0680033792.01 | MsG0880045965.01 | 0.810321 | 1.221561e-50 | 7.340566e-48 |
| MsG0680033792.01 | MsG0880047191.01 | 0.830649 | 2.607039e-55 | 2.763792e-52 |
| MsG0480018603.01 | MsG0680033792.01 | 0.808019 | 3.803775e-50 | 2.151030e-47 |
| MsG0480018906.01 | MsG0680033792.01 | 0.801516 | 8.676727e-49 | 4.151954e-46 |
| MsG0480018964.01 | MsG0680033792.01 | 0.801563 | 8.488839e-49 | 4.066721e-46 |
| MsG0480019435.01 | MsG0680033792.01 | 0.805428 | 1.341575e-49 | 7.095729e-47 |
| MsG0480020090.01 | MsG0680033792.01 | 0.813602 | 2.355562e-51 | 1.545175e-48 |
| MsG0480020136.01 | MsG0680033792.01 | 0.800724 | 1.260279e-48 | 5.910810e-46 |
| MsG0480020445.01 | MsG0680033792.01 | 0.805653 | 1.203171e-49 | 6.400805e-47 |
| MsG0480020521.01 | MsG0680033792.01 | 0.821472 | 3.965960e-53 | 3.229486e-50 |
| MsG0480020839.01 | MsG0680033792.01 | 0.818608 | 1.793771e-52 | 1.348944e-49 |
| MsG0480020907.01 | MsG0680033792.01 | 0.806939 | 6.448506e-50 | 3.545371e-47 |
| MsG0480021274.01 | MsG0680033792.01 | 0.819117 | 1.374389e-52 | 1.048263e-49 |
| MsG0480021280.01 | MsG0680033792.01 | 0.818144 | 2.284897e-52 | 1.696495e-49 |
| MsG0480021448.01 | MsG0680033792.01 | 0.821778 | 3.369634e-53 | 2.767857e-50 |
| MsG0480021464.01 | MsG0680033792.01 | 0.819528 | 1.107822e-52 | 8.546871e-50 |
| MsG0480021465.01 | MsG0680033792.01 | 0.801369 | 9.300737e-49 | 4.434099e-46 |
| MsG0480021536.01 | MsG0680033792.01 | 0.814482 | 1.506282e-51 | 1.011950e-48 |
| MsG0480021558.01 | MsG0680033792.01 | 0.817361 | 3.431094e-52 | 2.493487e-49 |
| MsG0480021853.01 | MsG0680033792.01 | 0.812089 | 5.052258e-51 | 3.182159e-48 |
| MsG0480022052.01 | MsG0680033792.01 | -0.826679 | 2.376303e-54 | 2.243913e-51 |
| MsG0480022164.01 | MsG0680033792.01 | 0.810825 | 9.506795e-51 | 5.790283e-48 |
| MsG0480022222.01 | MsG0680033792.01 | 0.826834 | 2.182254e-54 | 2.069843e-51 |
| MsG0480022707.01 | MsG0680033792.01 | 0.826877 | 2.131544e-54 | 2.024313e-51 |
| MsG0480022768.01 | MsG0680033792.01 | 0.819114 | 1.376430e-52 | 1.049741e-49 |
| MsG0480022825.01 | MsG0680033792.01 | 0.809363 | 1.963310e-50 | 1.150466e-47 |
| MsG0480022827.01 | MsG0680033792.01 | 0.827444 | 1.559289e-54 | 1.505702e-51 |
| MsG0480022877.01 | MsG0680033792.01 | 0.801631 | 8.221806e-49 | 3.945485e-46 |
| MsG0480023248.01 | MsG0680033792.01 | 0.800503 | 1.397914e-48 | 6.519681e-46 |
| MsG0480023654.01 | MsG0680033792.01 | 0.834416 | 3.035255e-56 | 3.599802e-53 |
| MsG0480023707.01 | MsG0680033792.01 | 0.810109 | 1.357395e-50 | 8.112126e-48 |
| MsG0480023814.01 | MsG0680033792.01 | 0.824915 | 6.232653e-54 | 5.597303e-51 |
| MsG0580024165.01 | MsG0680033792.01 | 0.824366 | 8.393951e-54 | 7.419449e-51 |
| MsG0580024390.01 | MsG0680033792.01 | 0.800170 | 1.634459e-48 | 7.558657e-46 |
| MsG0580024621.01 | MsG0680033792.01 | 0.805604 | 1.232016e-49 | 6.545716e-47 |
| MsG0580024945.01 | MsG0680033792.01 | 0.802427 | 5.640542e-49 | 2.762362e-46 |
| MsG0580024981.01 | MsG0680033792.01 | 0.803192 | 3.919749e-49 | 1.957390e-46 |
| MsG0580025135.01 | MsG0680033792.01 | 0.812058 | 5.131987e-51 | 3.229510e-48 |
| MsG0580025448.01 | MsG0680033792.01 | 0.811266 | 7.629855e-51 | 4.701461e-48 |
| MsG0580025758.01 | MsG0680033792.01 | 0.814793 | 1.285433e-51 | 8.708161e-49 |
| MsG0580025936.01 | MsG0680033792.01 | 0.829395 | 5.272379e-55 | 5.389702e-52 |
| MsG0580026002.01 | MsG0680033792.01 | 0.818265 | 2.144979e-52 | 1.597885e-49 |
| MsG0380015164.01 | MsG0680033792.01 | 0.800233 | 1.586317e-48 | 7.347962e-46 |
| MsG0380015400.01 | MsG0680033792.01 | 0.800696 | 1.276837e-48 | 5.984163e-46 |
| MsG0380015566.01 | MsG0680033792.01 | 0.807582 | 4.710793e-50 | 2.633518e-47 |
| MsG0380015720.01 | MsG0680033792.01 | 0.819681 | 1.022140e-52 | 7.919138e-50 |
| MsG0380016004.01 | MsG0680033792.01 | 0.826444 | 2.704027e-54 | 2.536349e-51 |
| MsG0380016064.01 | MsG0680033792.01 | 0.822451 | 2.352789e-53 | 1.970100e-50 |
| MsG0380016131.01 | MsG0680033792.01 | 0.805548 | 1.265683e-49 | 6.714964e-47 |
| MsG0380016342.01 | MsG0680033792.01 | -0.800448 | 1.434256e-48 | 6.679951e-46 |
| MsG0380016475.01 | MsG0680033792.01 | 0.824972 | 6.042000e-54 | 5.434878e-51 |
| MsG0380016581.01 | MsG0680033792.01 | 0.805677 | 1.189191e-49 | 6.330413e-47 |
| MsG0380016624.01 | MsG0680033792.01 | 0.800578 | 1.349756e-48 | 6.307203e-46 |
| MsG0380016910.01 | MsG0680033792.01 | 0.828087 | 1.092252e-54 | 1.074661e-51 |
| MsG0380017233.01 | MsG0680033792.01 | 0.804365 | 2.237398e-49 | 1.151452e-46 |
| MsG0480018163.01 | MsG0680033792.01 | 0.808708 | 2.712376e-50 | 1.561755e-47 |
| MsG0480018206.01 | MsG0680033792.01 | 0.803917 | 2.772797e-49 | 1.410748e-46 |
| MsG0580026718.01 | MsG0680033792.01 | 0.814301 | 1.651796e-51 | 1.104295e-48 |
| MsG0580026777.01 | MsG0680033792.01 | 0.838562 | 2.671208e-57 | 3.591381e-54 |
| MsG0580027228.01 | MsG0680033792.01 | 0.815892 | 7.324649e-52 | 5.112831e-49 |
| MsG0580027320.01 | MsG0680033792.01 | 0.806590 | 7.638691e-50 | 4.162155e-47 |
| MsG0580027344.01 | MsG0680033792.01 | 0.845834 | 3.171132e-59 | 5.353394e-56 |
| MsG0580027687.01 | MsG0680033792.01 | 0.806160 | 9.415019e-50 | 5.074283e-47 |
| MsG0580027688.01 | MsG0680033792.01 | 0.817085 | 3.958809e-52 | 2.855247e-49 |
| MsG0580028044.01 | MsG0680033792.01 | 0.811985 | 5.323232e-51 | 3.343273e-48 |
| MsG0580028394.01 | MsG0680033792.01 | 0.820558 | 6.436855e-53 | 5.110081e-50 |
| MsG0580028527.01 | MsG0680033792.01 | 0.801605 | 8.323187e-49 | 3.991405e-46 |
| MsG0580028990.01 | MsG0680033792.01 | 0.820598 | 6.302141e-53 | 5.008333e-50 |
| MsG0580028991.01 | MsG0680033792.01 | 0.830585 | 2.703026e-55 | 2.859962e-52 |
| MsG0580029189.01 | MsG0680033792.01 | 0.802108 | 6.561050e-49 | 3.186964e-46 |
| MsG0580029554.01 | MsG0680033792.01 | 0.819832 | 9.440676e-53 | 7.345294e-50 |
| MsG0580029729.01 | MsG0680033792.01 | 0.803486 | 3.406674e-49 | 1.714079e-46 |
| MsG0580029924.01 | MsG0680033792.01 | 0.824024 | 1.009652e-53 | 8.837924e-51 |
| MsG0580029925.01 | MsG0680033792.01 | 0.806178 | 9.329594e-50 | 5.030695e-47 |
| MsG0580030080.01 | MsG0680033792.01 | 0.804668 | 1.934197e-49 | 1.003211e-46 |
| MsG0680030316.01 | MsG0680033792.01 | 0.838915 | 2.165801e-57 | 2.943176e-54 |
| MsG0680030366.01 | MsG0680033792.01 | 0.816597 | 5.095947e-52 | 3.626543e-49 |
| MsG0680030656.01 | MsG0680033792.01 | 0.804627 | 1.972823e-49 | 1.022135e-46 |
| MsG0680030667.01 | MsG0680033792.01 | 0.820617 | 6.239431e-53 | 4.961159e-50 |
| MsG0280006456.01 | MsG0680033792.01 | 0.839286 | 1.734841e-57 | 2.384553e-54 |
| MsG0280007311.01 | MsG0680033792.01 | 0.822206 | 2.681537e-53 | 2.229613e-50 |
| MsG0280007711.01 | MsG0680033792.01 | 0.801764 | 7.718968e-49 | 3.716686e-46 |
| MsG0280008182.01 | MsG0680033792.01 | 0.800382 | 1.479228e-48 | 6.878241e-46 |
| MsG0280008615.01 | MsG0680033792.01 | 0.851113 | 1.096713e-60 | 2.196385e-57 |
| MsG0280008733.01 | MsG0680033792.01 | 0.801087 | 1.062367e-48 | 5.029081e-46 |
| MsG0280008885.01 | MsG0680033792.01 | 0.829437 | 5.150967e-55 | 5.271629e-52 |
| MsG0280009637.01 | MsG0680033792.01 | -0.804155 | 2.473734e-49 | 1.266248e-46 |
| MsG0280009739.01 | MsG0680033792.01 | 0.820919 | 5.317059e-53 | 4.263930e-50 |
| MsG0280009813.01 | MsG0680033792.01 | 0.825541 | 4.430459e-54 | 4.050070e-51 |
| MsG0280010389.01 | MsG0680033792.01 | 0.819139 | 1.358904e-52 | 1.036992e-49 |
| MsG0280010443.01 | MsG0680033792.01 | 0.811645 | 6.311929e-51 | 3.928253e-48 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033792.01.T01 | MTR_6g053280 | 50.000 | 140 | 20 | 3 | 26 | 116 | 131 | 269 | 3.58e-28 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0680033792.01.T01 | AT5G52840 | 60.811 | 74 | 28 | 1 | 14 | 87 | 33 | 105 | 7.25e-20 | 78.6 |
| MsG0680033792.01.T01 | AT5G52840 | 61.111 | 72 | 27 | 1 | 14 | 85 | 33 | 103 | 1.05e-18 | 77.0 |
Find 21 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCGTTGATTGCAGATTTC+CGG | 0.257432 | 6:-73609684 | None:intergenic |
| TTACGATACCCTTTGTCTTC+TGG | 0.257585 | 6:-73610123 | None:intergenic |
| CTTTACGCGTCTTGGACTTA+AGG | 0.317074 | 6:+73610161 | MsG0680033792.01.T01:CDS |
| TTTGTCAAGAAGAAGAATAT+TGG | 0.391623 | 6:+73610184 | MsG0680033792.01.T01:CDS |
| TCTGGTGACTGTTCAATTGC+CGG | 0.392277 | 6:+73609665 | MsG0680033792.01.T01:CDS |
| TATTGAGAATCGTCTTGGTT+GGG | 0.401668 | 6:+73610212 | MsG0680033792.01.T01:CDS |
| GTTGAAAGCTTTACGCGTCT+TGG | 0.426516 | 6:+73610153 | MsG0680033792.01.T01:CDS |
| AAACTTATTTGCCTTATGAA+TGG | 0.436503 | 6:+73610276 | MsG0680033792.01.T01:CDS |
| GAATCGTCTTGGTTGGGGTC+AGG | 0.444696 | 6:+73610218 | MsG0680033792.01.T01:CDS |
| AAATATGCAATCAACGATTC+TGG | 0.448683 | 6:+73609647 | MsG0680033792.01.T01:CDS |
| AAATCTGCAATCAACGATTC+CGG | 0.461835 | 6:+73609688 | MsG0680033792.01.T01:CDS |
| ACAAGAAAAGATGGTGCTGC+TGG | 0.493227 | 6:+73611947 | MsG0680033792.01.T01:CDS |
| ATTGAGAATCGTCTTGGTTG+GGG | 0.506457 | 6:+73610213 | MsG0680033792.01.T01:CDS |
| AGACACTAGACGAGATCAAA+AGG | 0.507698 | 6:+73610098 | MsG0680033792.01.T01:intron |
| ATGAATATTGAGAATCGTCT+TGG | 0.525507 | 6:+73610207 | MsG0680033792.01.T01:CDS |
| ATATTGAGAATCGTCTTGGT+TGG | 0.528056 | 6:+73610211 | MsG0680033792.01.T01:CDS |
| AAAAGGTTCCAGAAGACAAA+GGG | 0.544243 | 6:+73610115 | MsG0680033792.01.T01:CDS |
| TGTAAATACAGGTTTGTCGA+TGG | 0.574804 | 6:+73611898 | MsG0680033792.01.T01:intron |
| CAAAAGGTTCCAGAAGACAA+AGG | 0.593199 | 6:+73610114 | MsG0680033792.01.T01:CDS |
| GTGGCTGAAACAAGAAAAGA+TGG | 0.607028 | 6:+73611938 | MsG0680033792.01.T01:CDS |
| GGCAAAGATAGAAGAACTTG+TGG | 0.623499 | 6:+73611919 | MsG0680033792.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTAATTTATATAAA+AGG | + | Chr6:73609861-73609880 | MsG0680033792.01.T01:intron | 0.0% |
| !!! | ATTTTTTAATTTATATAAAA+GGG | + | Chr6:73609862-73609881 | MsG0680033792.01.T01:intron | 0.0% |
| !!! | TTTTCGATTATATTTTTTAT+CGG | - | Chr6:73609751-73609770 | None:intergenic | 10.0% |
| !! | AATTTATATAAAAGGGTAAA+TGG | + | Chr6:73609869-73609888 | MsG0680033792.01.T01:intron | 15.0% |
| !! | ATTTATATAAAAGGGTAAAT+GGG | + | Chr6:73609870-73609889 | MsG0680033792.01.T01:intron | 15.0% |
| !! | TTTAAGTAGATTATTAGTAA+GGG | + | Chr6:73610457-73610476 | MsG0680033792.01.T01:intron | 15.0% |
| !!! | ATTATATTTTTTATCGGAAT+TGG | - | Chr6:73609745-73609764 | None:intergenic | 15.0% |
| !!! | TTGTTATTTAATCATATGAT+AGG | - | Chr6:73610483-73610502 | None:intergenic | 15.0% |
| !!! | TTTTTTTCTCATTGAAAAAA+AGG | - | Chr6:73611463-73611482 | None:intergenic | 15.0% |
| !! | ACAAAAAAATACCATTCATA+AGG | - | Chr6:73610290-73610309 | None:intergenic | 20.0% |
| !! | ATTCTAGTATTTAACTCTAA+TGG | - | Chr6:73610512-73610531 | None:intergenic | 20.0% |
| !! | CAAACAAAAAAATAAACAGA+TGG | - | Chr6:73610722-73610741 | None:intergenic | 20.0% |
| !! | GATGGTAATTAAATAAAACA+TGG | - | Chr6:73610704-73610723 | None:intergenic | 20.0% |
| !! | GTTTAAGTAGATTATTAGTA+AGG | + | Chr6:73610456-73610475 | MsG0680033792.01.T01:intron | 20.0% |
| !! | TCATATGATTAAATAACAAG+AGG | + | Chr6:73610484-73610503 | MsG0680033792.01.T01:intron | 20.0% |
| !! | TTCTAGTATTTAACTCTAAT+GGG | - | Chr6:73610511-73610530 | None:intergenic | 20.0% |
| !!! | CATCTGTTTATTTTTTTGTT+TGG | + | Chr6:73610720-73610739 | MsG0680033792.01.T01:intron | 20.0% |
| !!! | TAGAATGTTTCTATATAAAG+CGG | + | Chr6:73610526-73610545 | MsG0680033792.01.T01:intron | 20.0% |
| !!! | TTGTTTTTCTTTTGTATCAT+CGG | + | Chr6:73610849-73610868 | MsG0680033792.01.T01:intron | 20.0% |
| !!! | TTTCTATGTTGATTAATATG+TGG | - | Chr6:73611505-73611524 | None:intergenic | 20.0% |
| ! | AAAAAAGGTAGTGATTATGA+AGG | - | Chr6:73611448-73611467 | None:intergenic | 25.0% |
| ! | AAACTTATTTGCCTTATGAA+TGG | + | Chr6:73610276-73610295 | MsG0680033792.01.T01:CDS | 25.0% |
| ! | ATTTCCATTCGTATGAATAA+AGG | + | Chr6:73610676-73610695 | MsG0680033792.01.T01:intron | 25.0% |
| ! | GGTAGTTTGAATCAAATATT+AGG | + | Chr6:73609891-73609910 | MsG0680033792.01.T01:intron | 25.0% |
| ! | TAATTAGTAGGTCGTTAATT+AGG | + | Chr6:73610434-73610453 | MsG0680033792.01.T01:intron | 25.0% |
| ! | TCTAGTATTTAACTCTAATG+GGG | - | Chr6:73610510-73610529 | None:intergenic | 25.0% |
| ! | TTGTGGTTACATTCAATTAT+TGG | + | Chr6:73611307-73611326 | MsG0680033792.01.T01:intron | 25.0% |
| ! | TTTGTCAAGAAGAAGAATAT+TGG | + | Chr6:73610184-73610203 | MsG0680033792.01.T01:CDS | 25.0% |
| !! | GTAACTTATCATATTTTACC+TGG | + | Chr6:73610926-73610945 | MsG0680033792.01.T01:intron | 25.0% |
| !! | TGTTTTTCTTTTGTATCATC+GGG | + | Chr6:73610850-73610869 | MsG0680033792.01.T01:intron | 25.0% |
| !! | TTCTACTATTTGTTGCAAAT+TGG | + | Chr6:73610380-73610399 | MsG0680033792.01.T01:intron | 25.0% |
| !!! | TAAGAAAATAGGTTTTTCGA+AGG | - | Chr6:73611571-73611590 | None:intergenic | 25.0% |
| !!! | TTAAGAGACTGTATTTTAGA+AGG | - | Chr6:73611782-73611801 | None:intergenic | 25.0% |
| !!! | TTTGTTTTTTGTGAGCTTAT+TGG | + | Chr6:73610316-73610335 | MsG0680033792.01.T01:intron | 25.0% |
| AAATATGCAATCAACGATTC+TGG | + | Chr6:73609647-73609666 | MsG0680033792.01.T01:CDS | 30.0% | |
| AATTGTGTGAATGAATACTG+AGG | + | Chr6:73611034-73611053 | MsG0680033792.01.T01:intron | 30.0% | |
| ACAATAGATACGGTATAACA+AGG | - | Chr6:73611087-73611106 | None:intergenic | 30.0% | |
| AGGAAAAATGAAGTTGAACT+TGG | - | Chr6:73611551-73611570 | None:intergenic | 30.0% | |
| AGTTACTAGAGAAAACAGAT+TGG | - | Chr6:73611628-73611647 | None:intergenic | 30.0% | |
| AGTTAGGATCTAATATGAGA+GGG | + | Chr6:73610404-73610423 | MsG0680033792.01.T01:intron | 30.0% | |
| ATGAATATTGAGAATCGTCT+TGG | + | Chr6:73610207-73610226 | MsG0680033792.01.T01:CDS | 30.0% | |
| ATTGTGTGAATGAATACTGA+GGG | + | Chr6:73611035-73611054 | MsG0680033792.01.T01:intron | 30.0% | |
| CCATTCTGTGTAACAAAAAA+TGG | + | Chr6:73611109-73611128 | MsG0680033792.01.T01:intron | 30.0% | |
| CTATATAAAGCGGAATTCTT+AGG | + | Chr6:73610536-73610555 | MsG0680033792.01.T01:intron | 30.0% | |
| GTCGAAATTACATCAAAAGT+GGG | - | Chr6:73611421-73611440 | None:intergenic | 30.0% | |
| GTTACTGTTAATTCGATTCT+AGG | + | Chr6:73610752-73610771 | MsG0680033792.01.T01:intron | 30.0% | |
| TAGTTAGGATCTAATATGAG+AGG | + | Chr6:73610403-73610422 | MsG0680033792.01.T01:intron | 30.0% | |
| TGAGCTTATTGGCAATTATT+TGG | + | Chr6:73610327-73610346 | MsG0680033792.01.T01:intron | 30.0% | |
| TGTCGAAATTACATCAAAAG+TGG | - | Chr6:73611422-73611441 | None:intergenic | 30.0% | |
| ! | AAACAGATTGGTGTTCTATT+TGG | - | Chr6:73611616-73611635 | None:intergenic | 30.0% |
| ! | ACGGAATAACTTTTCTGTTT+AGG | + | Chr6:73610573-73610592 | MsG0680033792.01.T01:intron | 30.0% |
| ! | AGGTTGAAAGTATAAGTGTA+TGG | + | Chr6:73609911-73609930 | MsG0680033792.01.T01:intron | 30.0% |
| ! | AGTCTCTTAATTTTGTTCAG+TGG | + | Chr6:73611792-73611811 | MsG0680033792.01.T01:intron | 30.0% |
| ! | CGGAATAACTTTTCTGTTTA+GGG | + | Chr6:73610574-73610593 | MsG0680033792.01.T01:intron | 30.0% |
| ! | GGTTGAAAGTATAAGTGTAT+GGG | + | Chr6:73609912-73609931 | MsG0680033792.01.T01:intron | 30.0% |
| ! | TCATTCACACAATTCTAGAA+AGG | - | Chr6:73611028-73611047 | None:intergenic | 30.0% |
| ! | TTTGTTGCAAATTGGTAGTT+AGG | + | Chr6:73610388-73610407 | MsG0680033792.01.T01:intron | 30.0% |
| !! | CTCATTTGTTGTGTAAATAC+AGG | + | Chr6:73611887-73611906 | MsG0680033792.01.T01:intron | 30.0% |
| !!! | ATGTGGTTTTATAGTCTTGA+TGG | - | Chr6:73611488-73611507 | None:intergenic | 30.0% |
| !!! | ATTCTTAGGTGTTTTAGAGT+AGG | + | Chr6:73610550-73610569 | MsG0680033792.01.T01:intron | 30.0% |
| !!! | CCATTTTTTGTTACACAGAA+TGG | - | Chr6:73611112-73611131 | None:intergenic | 30.0% |
| !!! | GAATGGTATTTTTTTGTGTC+TGG | + | Chr6:73610293-73610312 | MsG0680033792.01.T01:intron | 30.0% |
| !!! | TTCAGTGGTTCTTATTTTCT+GGG | + | Chr6:73611807-73611826 | MsG0680033792.01.T01:intron | 30.0% |
| AAAAGGTTCCAGAAGACAAA+GGG | + | Chr6:73610115-73610134 | MsG0680033792.01.T01:CDS | 35.0% | |
| AAAGTATAAGTGTATGGGTG+TGG | + | Chr6:73609917-73609936 | MsG0680033792.01.T01:intron | 35.0% | |
| AAATCTGCAATCAACGATTC+CGG | + | Chr6:73609688-73609707 | MsG0680033792.01.T01:CDS | 35.0% | |
| AAGTATAAGTGTATGGGTGT+GGG | + | Chr6:73609918-73609937 | MsG0680033792.01.T01:intron | 35.0% | |
| AATTAACACTTCTCTTGCGT+TGG | - | Chr6:73610065-73610084 | None:intergenic | 35.0% | |
| AGTTGAACTTGGCGATTAAT+TGG | - | Chr6:73611540-73611559 | None:intergenic | 35.0% | |
| ATATTGAGAATCGTCTTGGT+TGG | + | Chr6:73610211-73610230 | MsG0680033792.01.T01:CDS | 35.0% | |
| ATTAACACTTCTCTTGCGTT+GGG | - | Chr6:73610064-73610083 | None:intergenic | 35.0% | |
| CAGAATGGACACAATAGATA+CGG | - | Chr6:73611097-73611116 | None:intergenic | 35.0% | |
| CAGATAACGACAGACAAATA+GGG | - | Chr6:73611746-73611765 | None:intergenic | 35.0% | |
| CTCTATGTTGTTCATTCATG+TGG | + | Chr6:73610958-73610977 | MsG0680033792.01.T01:intron | 35.0% | |
| GAACAGAAATGTTGACAAAG+AGG | - | Chr6:73611698-73611717 | None:intergenic | 35.0% | |
| GATTTGTCACACCAATTACA+GGG | + | Chr6:73611152-73611171 | MsG0680033792.01.T01:intron | 35.0% | |
| GCTTATTGGCAATTATTTGG+AGG | + | Chr6:73610330-73610349 | MsG0680033792.01.T01:intron | 35.0% | |
| GTCGTTATCTGATATTATCG+AGG | + | Chr6:73611755-73611774 | MsG0680033792.01.T01:intron | 35.0% | |
| GTTCTATTTGGATACAGTTG+TGG | - | Chr6:73611604-73611623 | None:intergenic | 35.0% | |
| TATCTGACATCAACATCTTG+TGG | + | Chr6:73611290-73611309 | MsG0680033792.01.T01:intron | 35.0% | |
| TATTGAGAATCGTCTTGGTT+GGG | + | Chr6:73610212-73610231 | MsG0680033792.01.T01:CDS | 35.0% | |
| TCAGATAACGACAGACAAAT+AGG | - | Chr6:73611747-73611766 | None:intergenic | 35.0% | |
| TCATGTGGTGTGATGAATTT+GGG | + | Chr6:73610973-73610992 | MsG0680033792.01.T01:intron | 35.0% | |
| TCTGTAATCTTCCCTGTAAT+TGG | - | Chr6:73611166-73611185 | None:intergenic | 35.0% | |
| TGTAAATACAGGTTTGTCGA+TGG | + | Chr6:73611898-73611917 | MsG0680033792.01.T01:intron | 35.0% | |
| TTCATGTGGTGTGATGAATT+TGG | + | Chr6:73610972-73610991 | MsG0680033792.01.T01:intron | 35.0% | |
| ! | AACATAGAGCATTATGTACC+AGG | - | Chr6:73610947-73610966 | None:intergenic | 35.0% |
| ! | AATCGTTGATTGCAGATTTC+CGG | - | Chr6:73609687-73609706 | None:intergenic | 35.0% |
| ! | ATTTGGGATGCTGAAAAACT+GGG | + | Chr6:73610792-73610811 | MsG0680033792.01.T01:intron | 35.0% |
| ! | GTTCTAGGCTGTAAGAAAAT+AGG | - | Chr6:73611582-73611601 | None:intergenic | 35.0% |
| ! | TGATTTGTCACACCAATTAC+AGG | + | Chr6:73611151-73611170 | MsG0680033792.01.T01:intron | 35.0% |
| ! | TGTCTTATTCTTGCCATCAA+AGG | - | Chr6:73610012-73610031 | None:intergenic | 35.0% |
| ! | TTTCTTTTGTATCATCGGGT+TGG | + | Chr6:73610854-73610873 | MsG0680033792.01.T01:intron | 35.0% |
| ! | TTTTCAGCATCCCAAATGAT+AGG | - | Chr6:73610789-73610808 | None:intergenic | 35.0% |
| !! | AATTCGATTCTAGGATCCAT+GGG | + | Chr6:73610761-73610780 | MsG0680033792.01.T01:intron | 35.0% |
| !! | GAGGGTGTTAAGTAATTAGT+AGG | + | Chr6:73610422-73610441 | MsG0680033792.01.T01:intron | 35.0% |
| !! | TAATTCGATTCTAGGATCCA+TGG | + | Chr6:73610760-73610779 | MsG0680033792.01.T01:intron | 35.0% |
| !!! | GCTTTTTGGGTTCTTCATTA+GGG | - | Chr6:73611976-73611995 | None:intergenic | 35.0% |
| !!! | GTTCAGTGGTTCTTATTTTC+TGG | + | Chr6:73611806-73611825 | MsG0680033792.01.T01:intron | 35.0% |
| !!! | TTAGGTGTTTTAGAGTAGGA+CGG | + | Chr6:73610554-73610573 | MsG0680033792.01.T01:intron | 35.0% |
| AAGACAACAACAGGAATCGT+AGG | + | Chr6:73610026-73610045 | MsG0680033792.01.T01:intron | 40.0% | |
| AGACACTAGACGAGATCAAA+AGG | + | Chr6:73610098-73610117 | MsG0680033792.01.T01:intron | 40.0% | |
| AGTATAAGTGTATGGGTGTG+GGG | + | Chr6:73609919-73609938 | MsG0680033792.01.T01:intron | 40.0% | |
| ATCCATGGGTTCCTATCATT+TGG | + | Chr6:73610775-73610794 | MsG0680033792.01.T01:intron | 40.0% | |
| ATTGAGAATCGTCTTGGTTG+GGG | + | Chr6:73610213-73610232 | MsG0680033792.01.T01:CDS | 40.0% | |
| CAAAAGGTTCCAGAAGACAA+AGG | + | Chr6:73610114-73610133 | MsG0680033792.01.T01:CDS | 40.0% | |
| CGTCTAGTGTCTTACTATAG+AGG | - | Chr6:73610090-73610109 | None:intergenic | 40.0% | |
| GAATGAATACTGAGGGAAAC+TGG | + | Chr6:73611042-73611061 | MsG0680033792.01.T01:intron | 40.0% | |
| GGCAAAGATAGAAGAACTTG+TGG | + | Chr6:73611919-73611938 | MsG0680033792.01.T01:CDS | 40.0% | |
| GGCAAGAATAAGACAACAAC+AGG | + | Chr6:73610017-73610036 | MsG0680033792.01.T01:intron | 40.0% | |
| GGTGCCTTTATTCATACGAA+TGG | - | Chr6:73610683-73610702 | None:intergenic | 40.0% | |
| GTGGCTGAAACAAGAAAAGA+TGG | + | Chr6:73611938-73611957 | MsG0680033792.01.T01:CDS | 40.0% | |
| TCACTAGTCGTCATAACACA+AGG | - | Chr6:73611847-73611866 | None:intergenic | 40.0% | |
| TCCATGGGTTCCTATCATTT+GGG | + | Chr6:73610776-73610795 | MsG0680033792.01.T01:intron | 40.0% | |
| TGAGTTCTTCGTGATTCTCT+CGG | - | Chr6:73609953-73609972 | None:intergenic | 40.0% | |
| TGTCAGATACCAACACATGT+CGG | - | Chr6:73611279-73611298 | None:intergenic | 40.0% | |
| TTACGATACCCTTTGTCTTC+TGG | - | Chr6:73610126-73610145 | None:intergenic | 40.0% | |
| TTATCGGAATTGGCATTTGC+TGG | - | Chr6:73609735-73609754 | None:intergenic | 40.0% | |
| TTCGATAGTGTTACGGTTAC+CGG | - | Chr6:73609710-73609729 | None:intergenic | 40.0% | |
| TTGGATACAGTTGTGGTTCT+AGG | - | Chr6:73611597-73611616 | None:intergenic | 40.0% | |
| ! | CATTTGGGATGCTGAAAAAC+TGG | + | Chr6:73610791-73610810 | MsG0680033792.01.T01:intron | 40.0% |
| ! | TTTCTGTTTAGGGTCAGAGT+AGG | + | Chr6:73610584-73610603 | MsG0680033792.01.T01:intron | 40.0% |
| ! | TTTGGGATGCTGAAAAACTG+GGG | + | Chr6:73610793-73610812 | MsG0680033792.01.T01:intron | 40.0% |
| !! | GATTCCTCTTTGAGTTGTGT+CGG | + | Chr6:73610606-73610625 | MsG0680033792.01.T01:intron | 40.0% |
| !!! | AGTGGTTCTTATTTTCTGGG+TGG | + | Chr6:73611810-73611829 | MsG0680033792.01.T01:intron | 40.0% |
| !!! | GCTGGTTTTCGATAGTGTTA+CGG | - | Chr6:73609717-73609736 | None:intergenic | 40.0% |
| !!! | GGCTTTTTGGGTTCTTCATT+AGG | - | Chr6:73611977-73611996 | None:intergenic | 40.0% |
| AAAGTGGGCACAACTTGTGT+CGG | - | Chr6:73611406-73611425 | None:intergenic | 45.0% | |
| CTTTACGCGTCTTGGACTTA+AGG | + | Chr6:73610161-73610180 | MsG0680033792.01.T01:CDS | 45.0% | |
| GACAGACAAATAGGGAGACT+TGG | - | Chr6:73611738-73611757 | None:intergenic | 45.0% | |
| GTTGAAAGCTTTACGCGTCT+TGG | + | Chr6:73610153-73610172 | MsG0680033792.01.T01:CDS | 45.0% | |
| TAGGGAGACTTGGAACAAAG+AGG | - | Chr6:73611728-73611747 | None:intergenic | 45.0% | |
| TCCCAAATGATAGGAACCCA+TGG | - | Chr6:73610780-73610799 | None:intergenic | 45.0% | |
| TCTAAGTGTCCGACATGTGT+TGG | + | Chr6:73611267-73611286 | MsG0680033792.01.T01:intron | 45.0% | |
| TCTGGTGACTGTTCAATTGC+CGG | + | Chr6:73609665-73609684 | MsG0680033792.01.T01:CDS | 45.0% | |
| ! | TTTTTCACCCCACACCTTTC+CGG | - | Chr6:73609830-73609849 | None:intergenic | 45.0% |
| !! | ACAAGAAAAGATGGTGCTGC+TGG | + | Chr6:73611947-73611966 | MsG0680033792.01.T01:CDS | 45.0% |
| AAGTGGGCACAACTTGTGTC+GGG | - | Chr6:73611405-73611424 | None:intergenic | 50.0% | |
| AGCTCCGACACAACTCAAAG+AGG | - | Chr6:73610613-73610632 | None:intergenic | 50.0% | |
| GAAGATGTTTCTCCGAGCGA+CGG | + | Chr6:73609981-73610000 | MsG0680033792.01.T01:intron | 50.0% | |
| TCTTTATCTCCCAGCGCTTC+CGG | + | Chr6:73609808-73609827 | MsG0680033792.01.T01:intron | 50.0% | |
| TTGTGTCGGAGCTTTGCTCT+GGG | + | Chr6:73610620-73610639 | MsG0680033792.01.T01:intron | 50.0% | |
| AACTTGTGTCGGGGACTCGA+GGG | - | Chr6:73611395-73611414 | None:intergenic | 55.0% | |
| AGTGGGCACAACTTGTGTCG+GGG | - | Chr6:73611404-73611423 | None:intergenic | 55.0% | |
| GAATCGTCTTGGTTGGGGTC+AGG | + | Chr6:73610218-73610237 | MsG0680033792.01.T01:CDS | 55.0% | |
| GTTGTGTCGGAGCTTTGCTC+TGG | + | Chr6:73610619-73610638 | MsG0680033792.01.T01:intron | 55.0% | |
| ATCTCCCAGCGCTTCCGGAA+AGG | + | Chr6:73609813-73609832 | MsG0680033792.01.T01:intron | 60.0% | |
| CAACTTGTGTCGGGGACTCG+AGG | - | Chr6:73611396-73611415 | None:intergenic | 60.0% | |
| ! | AGCGCTTCCGGAAAGGTGTG+GGG | + | Chr6:73609820-73609839 | MsG0680033792.01.T01:intron | 60.0% |
| ! | CAGCGCTTCCGGAAAGGTGT+GGG | + | Chr6:73609819-73609838 | MsG0680033792.01.T01:intron | 60.0% |
| !! | CACACCTTTCCGGAAGCGCT+GGG | - | Chr6:73609820-73609839 | None:intergenic | 60.0% |
| !! | CGGGGACTCGAGGGTATCTA+GGG | - | Chr6:73611386-73611405 | None:intergenic | 60.0% |
| !! | TCGGGGACTCGAGGGTATCT+AGG | - | Chr6:73611387-73611406 | None:intergenic | 60.0% |
| CCAGCGCTTCCGGAAAGGTG+TGG | + | Chr6:73609818-73609837 | MsG0680033792.01.T01:intron | 65.0% | |
| TGTTTCTCCGAGCGACGGCG+CGG | + | Chr6:73609986-73610005 | MsG0680033792.01.T01:intron | 65.0% | |
| ! | CCACACCTTTCCGGAAGCGC+TGG | - | Chr6:73609821-73609840 | None:intergenic | 65.0% |
| AGCGACGGCGCGGCCTTTGA+TGG | + | Chr6:73609996-73610015 | MsG0680033792.01.T01:intron | 70.0% | |
| TCAAAGGCCGCGCCGTCGCT+CGG | - | Chr6:73609996-73610015 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr6 | gene | 73609642 | 73612000 | 73609642 | ID=MsG0680033792.01;Name=MsG0680033792.01 |
| Chr6 | mRNA | 73609642 | 73612000 | 73609642 | ID=MsG0680033792.01.T01;Parent=MsG0680033792.01;Name=MsG0680033792.01.T01;_AED=0.43;_eAED=0.43;_QI=0|0|0|0.33|1|1|3|0|116 |
| Chr6 | exon | 73609642 | 73609709 | 73609642 | ID=MsG0680033792.01.T01:exon:3700;Parent=MsG0680033792.01.T01 |
| Chr6 | exon | 73610107 | 73610297 | 73610107 | ID=MsG0680033792.01.T01:exon:3699;Parent=MsG0680033792.01.T01 |
| Chr6 | exon | 73611909 | 73612000 | 73611909 | ID=MsG0680033792.01.T01:exon:3698;Parent=MsG0680033792.01.T01 |
| Chr6 | CDS | 73609642 | 73609709 | 73609642 | ID=MsG0680033792.01.T01:cds;Parent=MsG0680033792.01.T01 |
| Chr6 | CDS | 73610107 | 73610297 | 73610107 | ID=MsG0680033792.01.T01:cds;Parent=MsG0680033792.01.T01 |
| Chr6 | CDS | 73611909 | 73612000 | 73611909 | ID=MsG0680033792.01.T01:cds;Parent=MsG0680033792.01.T01 |
| Gene Sequence |
| Protein sequence |
