Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027344.01.T02 | XP_003614537.1 | 92.424 | 66 | 2 | 1 | 1 | 63 | 1 | 66 | 2.32E-33 | 121 |
| MsG0580027344.01.T01 | XP_003614537.1 | 92.5 | 120 | 6 | 1 | 1 | 117 | 1 | 120 | 3.29E-70 | 216 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027344.01.T01 | G7JZF0 | 92.500 | 120 | 6 | 1 | 1 | 117 | 1 | 120 | 1.57e-70 | 216 |
| MsG0580027344.01.T02 | G7JZF0 | 92.424 | 66 | 2 | 1 | 1 | 63 | 1 | 66 | 1.11e-33 | 121 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080047869.01 | MsG0580027344.01 | 0.810058 | 1.391875e-50 | 8.307100e-48 |
| MsG0180000152.01 | MsG0580027344.01 | 0.841117 | 5.770262e-58 | 8.393493e-55 |
| MsG0180000550.01 | MsG0580027344.01 | 0.810089 | 1.371092e-50 | 8.189118e-48 |
| MsG0180000607.01 | MsG0580027344.01 | 0.805368 | 1.380731e-49 | 7.291670e-47 |
| MsG0180000732.01 | MsG0580027344.01 | 0.813249 | 2.815867e-51 | 1.829354e-48 |
| MsG0180001141.01 | MsG0580027344.01 | 0.804794 | 1.820694e-49 | 9.474503e-47 |
| MsG0180001663.01 | MsG0580027344.01 | 0.816148 | 6.420039e-52 | 4.513277e-49 |
| MsG0180002482.01 | MsG0580027344.01 | 0.801409 | 9.126930e-49 | 4.355461e-46 |
| MsG0180003124.01 | MsG0580027344.01 | 0.803685 | 3.098393e-49 | 1.566901e-46 |
| MsG0180003669.01 | MsG0580027344.01 | 0.812064 | 5.116614e-51 | 3.220331e-48 |
| MsG0180003671.01 | MsG0580027344.01 | 0.804257 | 2.356405e-49 | 1.209268e-46 |
| MsG0180003854.01 | MsG0580027344.01 | 0.801600 | 8.342828e-49 | 4.000288e-46 |
| MsG0180004157.01 | MsG0580027344.01 | 0.801292 | 9.647517e-49 | 4.590377e-46 |
| MsG0180004996.01 | MsG0580027344.01 | 0.807242 | 5.561897e-50 | 3.082216e-47 |
| MsG0180005125.01 | MsG0580027344.01 | 0.802259 | 6.108495e-49 | 2.978596e-46 |
| MsG0180005371.01 | MsG0580027344.01 | 0.834387 | 3.086580e-56 | 3.657375e-53 |
| MsG0180005842.01 | MsG0580027344.01 | 0.800804 | 1.213442e-48 | 5.702801e-46 |
| MsG0180006016.01 | MsG0580027344.01 | 0.817284 | 3.572254e-52 | 2.590437e-49 |
| MsG0180006138.01 | MsG0580027344.01 | 0.803515 | 3.360538e-49 | 1.692142e-46 |
| MsG0280006356.01 | MsG0580027344.01 | 0.821767 | 3.388508e-53 | 2.782469e-50 |
| MsG0280006411.01 | MsG0580027344.01 | 0.831857 | 1.316060e-55 | 1.446201e-52 |
| MsG0280010702.01 | MsG0580027344.01 | 0.803474 | 3.426425e-49 | 1.723444e-46 |
| MsG0280010943.01 | MsG0580027344.01 | 0.816081 | 6.646547e-52 | 4.664076e-49 |
| MsG0280011032.01 | MsG0580027344.01 | 0.831603 | 1.520335e-55 | 1.658040e-52 |
| MsG0280011070.01 | MsG0580027344.01 | 0.826908 | 2.095681e-54 | 1.992169e-51 |
| MsG0280011086.01 | MsG0580027344.01 | 0.808186 | 3.504465e-50 | 1.990630e-47 |
| MsG0280011156.01 | MsG0580027344.01 | 0.810552 | 1.089227e-50 | 6.585549e-48 |
| MsG0280011446.01 | MsG0580027344.01 | 0.805870 | 1.083352e-49 | 5.795699e-47 |
| MsG0380012661.01 | MsG0580027344.01 | -0.822587 | 2.187759e-53 | 1.839100e-50 |
| MsG0380014561.01 | MsG0580027344.01 | 0.813753 | 2.182037e-51 | 1.437162e-48 |
| MsG0380014573.01 | MsG0580027344.01 | 0.833813 | 4.297457e-56 | 5.005362e-53 |
| MsG0380014647.01 | MsG0580027344.01 | 0.823917 | 1.069701e-53 | 9.336398e-51 |
| MsG0480018906.01 | MsG0580027344.01 | 0.830725 | 2.497929e-55 | 2.654119e-52 |
| MsG0480019434.01 | MsG0580027344.01 | 0.803720 | 3.046371e-49 | 1.541988e-46 |
| MsG0480020085.01 | MsG0580027344.01 | 0.806213 | 9.173058e-50 | 4.950682e-47 |
| MsG0480020090.01 | MsG0580027344.01 | 0.833059 | 6.629564e-56 | 7.548967e-53 |
| MsG0480020445.01 | MsG0580027344.01 | 0.855152 | 7.643621e-62 | 1.747804e-58 |
| MsG0480020839.01 | MsG0580027344.01 | 0.847101 | 1.431119e-59 | 2.516663e-56 |
| MsG0480021164.01 | MsG0580027344.01 | 0.813566 | 2.398731e-51 | 1.571937e-48 |
| MsG0480021274.01 | MsG0580027344.01 | 0.802569 | 5.271164e-49 | 2.590652e-46 |
| MsG0480021448.01 | MsG0580027344.01 | 0.810403 | 1.172962e-50 | 7.063549e-48 |
| MsG0480021451.01 | MsG0580027344.01 | 0.804153 | 2.476987e-49 | 1.267824e-46 |
| MsG0480021464.01 | MsG0580027344.01 | 0.823861 | 1.102414e-53 | 9.607048e-51 |
| MsG0480021536.01 | MsG0580027344.01 | 0.812503 | 4.103877e-51 | 2.613817e-48 |
| MsG0480021853.01 | MsG0580027344.01 | 0.810952 | 8.924102e-51 | 5.454250e-48 |
| MsG0480022052.01 | MsG0580027344.01 | -0.808326 | 3.271587e-50 | 1.865256e-47 |
| MsG0480022222.01 | MsG0580027344.01 | 0.850891 | 1.265949e-60 | 2.516828e-57 |
| MsG0480022707.01 | MsG0580027344.01 | 0.821873 | 3.202978e-53 | 2.638075e-50 |
| MsG0480022768.01 | MsG0580027344.01 | 0.829517 | 4.926152e-55 | 5.053232e-52 |
| MsG0480023088.01 | MsG0580027344.01 | 0.853427 | 2.406981e-61 | 5.199459e-58 |
| MsG0480023270.01 | MsG0580027344.01 | 0.813616 | 2.339118e-51 | 1.534977e-48 |
| MsG0480023427.01 | MsG0580027344.01 | 0.802524 | 5.385146e-49 | 2.643613e-46 |
| MsG0480023654.01 | MsG0580027344.01 | 0.804919 | 1.714375e-49 | 8.950518e-47 |
| MsG0480023707.01 | MsG0580027344.01 | 0.806877 | 6.644023e-50 | 3.647084e-47 |
| MsG0580024114.01 | MsG0580027344.01 | 0.803119 | 4.057800e-49 | 2.022450e-46 |
| MsG0580024472.01 | MsG0580027344.01 | 0.803167 | 3.966128e-49 | 1.979297e-46 |
| MsG0580025448.01 | MsG0580027344.01 | 0.817633 | 2.980065e-52 | 2.181826e-49 |
| MsG0580025758.01 | MsG0580027344.01 | 0.833490 | 5.175184e-56 | 5.969156e-53 |
| MsG0580025936.01 | MsG0580027344.01 | 0.824182 | 9.273397e-54 | 8.154101e-51 |
| MsG0580026047.01 | MsG0580027344.01 | 0.842831 | 2.033129e-58 | 3.120602e-55 |
| MsG0380015164.01 | MsG0580027344.01 | 0.807303 | 5.399872e-50 | 2.997165e-47 |
| MsG0380015181.01 | MsG0580027344.01 | 0.800432 | 1.445289e-48 | 6.728762e-46 |
| MsG0380015400.01 | MsG0580027344.01 | 0.839173 | 1.856052e-57 | 2.542220e-54 |
| MsG0380015566.01 | MsG0580027344.01 | 0.802521 | 5.393225e-49 | 2.647346e-46 |
| MsG0380015720.01 | MsG0580027344.01 | 0.806725 | 7.156623e-50 | 3.913030e-47 |
| MsG0380015770.01 | MsG0580027344.01 | 0.834876 | 2.325456e-56 | 2.796035e-53 |
| MsG0380015771.01 | MsG0580027344.01 | 0.817717 | 2.852594e-52 | 2.093383e-49 |
| MsG0380015779.01 | MsG0580027344.01 | 0.811459 | 6.926373e-51 | 4.289996e-48 |
| MsG0380015822.01 | MsG0580027344.01 | 0.819888 | 9.164924e-53 | 7.141952e-50 |
| MsG0380016004.01 | MsG0580027344.01 | 0.810050 | 1.397789e-50 | 8.340488e-48 |
| MsG0380016475.01 | MsG0580027344.01 | 0.820970 | 5.176695e-53 | 4.157463e-50 |
| MsG0380016581.01 | MsG0580027344.01 | 0.833081 | 6.545445e-56 | 7.458504e-53 |
| MsG0380016624.01 | MsG0580027344.01 | 0.825622 | 4.239839e-54 | 3.884901e-51 |
| MsG0380016886.01 | MsG0580027344.01 | 0.830155 | 3.443652e-55 | 3.598725e-52 |
| MsG0380016910.01 | MsG0580027344.01 | 0.815288 | 9.982818e-52 | 6.854516e-49 |
| MsG0380017286.01 | MsG0580027344.01 | 0.822912 | 1.837574e-53 | 1.558973e-50 |
| MsG0380017326.01 | MsG0580027344.01 | 0.809175 | 2.154521e-50 | 1.256161e-47 |
| MsG0380017680.01 | MsG0580027344.01 | 0.826377 | 2.804713e-54 | 2.625925e-51 |
| MsG0380018009.01 | MsG0580027344.01 | 0.837316 | 5.584542e-57 | 7.226686e-54 |
| MsG0480018206.01 | MsG0580027344.01 | 0.814162 | 1.772821e-51 | 1.180650e-48 |
| MsG0580026777.01 | MsG0580027344.01 | 0.825983 | 3.480213e-54 | 3.221909e-51 |
| MsG0580027228.01 | MsG0580027344.01 | 0.816181 | 6.311497e-52 | 4.441004e-49 |
| MsG0580027344.01 | MsG0580027345.01 | 0.833076 | 6.562782e-56 | 7.477270e-53 |
| MsG0580027344.01 | MsG0580027605.01 | 0.804622 | 1.977037e-49 | 1.024193e-46 |
| MsG0580027344.01 | MsG0580028527.01 | 0.828910 | 6.911921e-55 | 6.964625e-52 |
| MsG0580027344.01 | MsG0580028901.01 | 0.808749 | 2.657638e-50 | 1.531934e-47 |
| MsG0580027344.01 | MsG0580028991.01 | 0.815645 | 8.311978e-52 | 5.763715e-49 |
| MsG0580027344.01 | MsG0680030316.01 | 0.818896 | 1.543282e-52 | 1.169985e-49 |
| MsG0580027344.01 | MsG0680030366.01 | 0.802626 | 5.131490e-49 | 2.525717e-46 |
| MsG0580027344.01 | MsG0680030415.01 | 0.811102 | 8.279796e-51 | 5.080082e-48 |
| MsG0580027344.01 | MsG0680030839.01 | 0.837817 | 4.154446e-57 | 5.460309e-54 |
| MsG0580027344.01 | MsG0680031379.01 | 0.800727 | 1.258586e-48 | 5.903334e-46 |
| MsG0580027344.01 | MsG0680031646.01 | 0.805311 | 1.419326e-49 | 7.484568e-47 |
| MsG0580027344.01 | MsG0680032203.01 | 0.806440 | 8.218578e-50 | 4.461036e-47 |
| MsG0580027344.01 | MsG0680032430.01 | 0.812598 | 3.911480e-51 | 2.497484e-48 |
| MsG0580027344.01 | MsG0680033228.01 | 0.803068 | 4.158204e-49 | 2.069707e-46 |
| MsG0580027344.01 | MsG0680033391.01 | 0.820334 | 7.246603e-53 | 5.717183e-50 |
| MsG0580027344.01 | MsG0680033792.01 | 0.845834 | 3.171132e-59 | 5.353394e-56 |
| MsG0580027344.01 | MsG0680034219.01 | 0.816274 | 6.018090e-52 | 4.245414e-49 |
| MsG0580027344.01 | MsG0680035346.01 | 0.810754 | 9.849228e-51 | 5.987524e-48 |
| MsG0580027344.01 | MsG0780035948.01 | 0.805584 | 1.244036e-49 | 6.606373e-47 |
| MsG0580027344.01 | MsG0780037503.01 | 0.802674 | 5.015887e-49 | 2.471790e-46 |
| MsG0580027344.01 | MsG0780037918.01 | 0.806034 | 1.000606e-49 | 5.375441e-47 |
| MsG0580027344.01 | MsG0780037942.01 | 0.801427 | 9.052244e-49 | 4.321759e-46 |
| MsG0580027344.01 | MsG0780038231.01 | 0.825496 | 4.541164e-54 | 4.145995e-51 |
| MsG0580027344.01 | MsG0780038444.01 | 0.809189 | 2.140237e-50 | 1.248307e-47 |
| MsG0580027344.01 | MsG0780038495.01 | 0.810315 | 1.225609e-50 | 7.363683e-48 |
| MsG0580027344.01 | MsG0780038827.01 | 0.811555 | 6.604403e-51 | 4.100777e-48 |
| MsG0580027344.01 | MsG0780038911.01 | 0.837594 | 4.740551e-57 | 6.187816e-54 |
| MsG0580027344.01 | MsG0780039452.01 | 0.803841 | 2.876012e-49 | 1.460341e-46 |
| MsG0580027344.01 | MsG0780040442.01 | 0.835328 | 1.788695e-56 | 2.180386e-53 |
| MsG0580027344.01 | MsG0780040445.01 | 0.807964 | 3.907634e-50 | 2.206519e-47 |
| MsG0580027344.01 | MsG0780040596.01 | 0.804577 | 2.020628e-49 | 1.045575e-46 |
| MsG0580027344.01 | MsG0780040858.01 | 0.817440 | 3.293873e-52 | 2.398975e-49 |
| MsG0580027344.01 | MsG0780040861.01 | 0.804594 | 2.004490e-49 | 1.037671e-46 |
| MsG0580027344.01 | MsG0780041294.01 | 0.811800 | 5.839061e-51 | 3.649114e-48 |
| MsG0580027344.01 | MsG0780041402.01 | 0.800673 | 1.290938e-48 | 6.046950e-46 |
| MsG0580027344.01 | MsG0780041559.01 | 0.806119 | 9.604309e-50 | 5.170760e-47 |
| MsG0580027344.01 | MsG0880042055.01 | 0.806058 | 9.889922e-50 | 5.316381e-47 |
| MsG0580027344.01 | MsG0880042065.01 | 0.811367 | 7.252978e-51 | 4.481129e-48 |
| MsG0580027344.01 | MsG0880042232.01 | 0.803109 | 4.077364e-49 | 2.031677e-46 |
| MsG0580027344.01 | MsG0880042294.01 | 0.822259 | 2.606054e-53 | 2.170238e-50 |
| MsG0580027344.01 | MsG0880042314.01 | 0.810593 | 1.067378e-50 | 6.460566e-48 |
| MsG0580027344.01 | MsG0880042404.01 | 0.805698 | 1.177169e-49 | 6.270016e-47 |
| MsG0580027344.01 | MsG0880042966.01 | 0.804030 | 2.627401e-49 | 1.340566e-46 |
| MsG0580027344.01 | MsG0880043002.01 | 0.824925 | 6.198401e-54 | 5.568204e-51 |
| MsG0580027344.01 | MsG0880043144.01 | 0.828557 | 8.412192e-55 | 8.390599e-52 |
| MsG0580027344.01 | MsG0880043303.01 | 0.845530 | 3.834888e-59 | 6.409656e-56 |
| MsG0580027344.01 | MsG0880043465.01 | 0.824329 | 8.563835e-54 | 7.561401e-51 |
| MsG0580027344.01 | MsG0880044079.01 | 0.800635 | 1.313856e-48 | 6.148340e-46 |
| MsG0580027344.01 | MsG0880044415.01 | 0.842328 | 2.766010e-58 | 4.179478e-55 |
| MsG0580027344.01 | MsG0880044542.01 | 0.815986 | 6.978096e-52 | 4.883914e-49 |
| MsG0580027344.01 | MsG0880045653.01 | 0.821222 | 4.528418e-53 | 3.662273e-50 |
| MsG0580027344.01 | MsG0880046058.01 | 0.812384 | 4.356987e-51 | 2.766249e-48 |
| MsG0580027344.01 | MsG0880046088.01 | 0.804569 | 2.028947e-49 | 1.049644e-46 |
| MsG0580027344.01 | MsG0880046285.01 | 0.826885 | 2.122531e-54 | 2.016201e-51 |
| MsG0580027344.01 | MsG0880046973.01 | 0.809121 | 2.212960e-50 | 1.288386e-47 |
| MsG0580027344.01 | MsG0880047019.01 | 0.810249 | 1.266224e-50 | 7.594721e-48 |
| MsG0580027344.01 | MsG0880047038.01 | 0.805165 | 1.523070e-49 | 8.001490e-47 |
| MsG0580027344.01 | MsG0880047191.01 | 0.844087 | 9.393766e-59 | 1.499964e-55 |
| MsG0580027344.01 | MsG0880047448.01 | 0.806626 | 7.507463e-50 | 4.094248e-47 |
| MsG0580027344.01 | MsG0880047608.01 | 0.806264 | 8.950974e-50 | 4.837017e-47 |
| MsG0280006456.01 | MsG0580027344.01 | 0.807716 | 4.412362e-50 | 2.475439e-47 |
| MsG0280006596.01 | MsG0580027344.01 | 0.803326 | 3.676999e-49 | 1.842407e-46 |
| MsG0280007222.01 | MsG0580027344.01 | 0.818906 | 1.534703e-52 | 1.163831e-49 |
| MsG0280007815.01 | MsG0580027344.01 | 0.812267 | 4.619540e-51 | 2.923823e-48 |
| MsG0280008417.01 | MsG0580027344.01 | 0.820567 | 6.407388e-53 | 5.087834e-50 |
| MsG0280008615.01 | MsG0580027344.01 | 0.824702 | 6.993384e-54 | 6.242484e-51 |
| MsG0280008885.01 | MsG0580027344.01 | 0.801813 | 7.542891e-49 | 3.636556e-46 |
| MsG0280008907.01 | MsG0580027344.01 | 0.803128 | 4.040757e-49 | 2.014430e-46 |
| MsG0280008971.01 | MsG0580027344.01 | 0.828796 | 7.367109e-55 | 7.398807e-52 |
| MsG0280009024.01 | MsG0580027344.01 | 0.825433 | 4.700167e-54 | 4.283265e-51 |
| MsG0280009739.01 | MsG0580027344.01 | 0.810513 | 1.110634e-50 | 6.707934e-48 |
| MsG0280009813.01 | MsG0580027344.01 | 0.807035 | 6.152475e-50 | 3.391140e-47 |
| MsG0280010389.01 | MsG0580027344.01 | 0.810789 | 9.678575e-51 | 5.889173e-48 |
| MsG0280010416.01 | MsG0580027344.01 | 0.806298 | 8.804771e-50 | 4.761933e-47 |
| MsG0280010443.01 | MsG0580027344.01 | 0.807011 | 6.224517e-50 | 3.428677e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027344.01.T02 | MTR_5g055200 | 92.424 | 66 | 2 | 1 | 1 | 63 | 1 | 66 | 2.80e-37 | 121 |
| MsG0580027344.01.T02 | MTR_5g055200 | 92.424 | 66 | 2 | 1 | 1 | 63 | 1 | 66 | 4.59e-37 | 120 |
| MsG0580027344.01.T02 | MTR_1g111150 | 60.526 | 76 | 27 | 1 | 1 | 73 | 1 | 76 | 6.94e-16 | 67.0 |
| MsG0580027344.01.T01 | MTR_5g055200 | 92.500 | 120 | 6 | 1 | 1 | 117 | 1 | 120 | 3.99e-74 | 216 |
| MsG0580027344.01.T01 | MTR_5g055200 | 81.013 | 79 | 10 | 2 | 1 | 74 | 1 | 79 | 8.31e-37 | 120 |
| MsG0580027344.01.T01 | MTR_1g111150 | 62.810 | 121 | 39 | 2 | 1 | 115 | 1 | 121 | 1.52e-36 | 121 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0580027344.01.T01 | AT1G68585 | 62.069 | 58 | 21 | 1 | 24 | 81 | 26 | 82 | 7.13e-17 | 70.9 |
Find 22 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGCCAATTTAGAGCTATA+AGG | 0.250970 | 5:-58774655 | MsG0580027344.01.T01:intron |
| TATCCCTTATAGCTCTAAAT+TGG | 0.256758 | 5:+58774651 | None:intergenic |
| TAATGTCAATAACCCTCTTT+TGG | 0.320029 | 5:+58774728 | None:intergenic |
| TTGCCAATTTAGAGCTATAA+GGG | 0.355432 | 5:-58774654 | MsG0580027344.01.T01:intron |
| GGCAAATTATTCCCATCAAC+AGG | 0.420406 | 5:-58772365 | MsG0580027344.01.T01:CDS |
| AGGCAGAGGATTCCTGTTGA+TGG | 0.425176 | 5:+58772353 | None:intergenic |
| CGTTTGGTAATTGCAACTTT+AGG | 0.425973 | 5:+58772333 | None:intergenic |
| TTCCAACACATTCACTTCCA+TGG | 0.444080 | 5:+58772440 | None:intergenic |
| GAAAGATTGAAATAAACGTT+TGG | 0.454568 | 5:+58772317 | None:intergenic |
| GGCAGAGGATTCCTGTTGAT+GGG | 0.484186 | 5:+58772354 | None:intergenic |
| TGCAGTAGAGACAGAGTCCA+TGG | 0.490511 | 5:-58772457 | MsG0580027344.01.T01:intron |
| AAGGATCTGTATGTTTAGAA+AGG | 0.501363 | 5:-58772273 | MsG0580027344.01.T01:three_prime_UTR |
| TTGTAAGTCGTAGCTAATCA+AGG | 0.519971 | 5:+58772295 | None:intergenic |
| GTAATTGCAACTTTAGGCAG+AGG | 0.520078 | 5:+58772339 | None:intergenic |
| GTGATTCCTTTAGCCACAGT+TGG | 0.523574 | 5:+58772390 | None:intergenic |
| ATATTACCAACTGTGGCTAA+AGG | 0.527091 | 5:-58772396 | MsG0580027344.01.T01:CDS |
| TACATTCATATTACCAACTG+TGG | 0.568778 | 5:-58772403 | MsG0580027344.01.T01:CDS |
| CTGTGGCTAAAGGAATCACT+AGG | 0.600468 | 5:-58772386 | MsG0580027344.01.T01:CDS |
| GTGTGAGAAGTGCCAAAAGA+GGG | 0.612120 | 5:-58774740 | MsG0580027344.01.T01:CDS |
| AGTGTGAGAAGTGCCAAAAG+AGG | 0.617748 | 5:-58774741 | MsG0580027344.01.T01:CDS |
| TGATTAGCTACGACTTACAA+AGG | 0.621450 | 5:-58772292 | MsG0580027344.01.T01:exon |
| GTCCATGGAAGTGAATGTGT+TGG | 0.627475 | 5:-58772442 | MsG0580027344.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATGATTTAAATTAAATAT+AGG | + | Chr5:58773902-58773921 | None:intergenic | 10.0% |
| !!! | ACTACATAAATAATTTTTTT+AGG | - | Chr5:58775352-58775371 | MsG0580027344.01.T01:five_prime_UTR | 10.0% |
| !! | AAAAATTATTCAAAGTAAAG+AGG | + | Chr5:58773958-58773977 | None:intergenic | 15.0% |
| !! | AATTGAAAATTGCAAAAAAA+AGG | - | Chr5:58774750-58774769 | MsG0580027344.01.T01:CDS | 15.0% |
| !! | ACAATAGTATTACAAATTTA+GGG | - | Chr5:58773150-58773169 | MsG0580027344.01.T01:intron | 15.0% |
| !! | ATAAATTATGTGTAGATAAA+TGG | - | Chr5:58774859-58774878 | MsG0580027344.01.T01:intron | 15.0% |
| !! | ATTGAAAATTGCAAAAAAAA+GGG | - | Chr5:58774751-58774770 | MsG0580027344.01.T01:CDS | 15.0% |
| !!! | AAATGTGATTTTTTTAATAG+GGG | + | Chr5:58774549-58774568 | None:intergenic | 15.0% |
| !!! | ATATGTTATGTTTGATTTTT+GGG | - | Chr5:58773839-58773858 | MsG0580027344.01.T01:intron | 15.0% |
| !!! | ATTTTCACTTACTTTATTTT+GGG | - | Chr5:58772625-58772644 | MsG0580027344.01.T01:intron | 15.0% |
| !!! | GAAATGTGATTTTTTTAATA+GGG | + | Chr5:58774550-58774569 | None:intergenic | 15.0% |
| !!! | TATTTTCACTTACTTTATTT+TGG | - | Chr5:58772624-58772643 | MsG0580027344.01.T01:intron | 15.0% |
| !!! | TGAAATGTGATTTTTTTAAT+AGG | + | Chr5:58774551-58774570 | None:intergenic | 15.0% |
| !! | AATTGCTATAAAAAGTTCAA+AGG | - | Chr5:58772540-58772559 | MsG0580027344.01.T01:intron | 20.0% |
| !! | ATAAAACATCAAATCTCTAT+TGG | - | Chr5:58773486-58773505 | MsG0580027344.01.T01:intron | 20.0% |
| !! | ATAACATATGTTTAGTATGA+CGG | + | Chr5:58773828-58773847 | None:intergenic | 20.0% |
| !! | ATAATTTATGTGAATTTCAG+TGG | + | Chr5:58774848-58774867 | None:intergenic | 20.0% |
| !! | GACAATAGTATTACAAATTT+AGG | - | Chr5:58773149-58773168 | MsG0580027344.01.T01:intron | 20.0% |
| !! | GACATTATTACAAAAATGAA+TGG | - | Chr5:58772863-58772882 | MsG0580027344.01.T01:intron | 20.0% |
| !! | TAAACCAATTGATCTTAAAT+AGG | + | Chr5:58773568-58773587 | None:intergenic | 20.0% |
| !! | TATAAATTCAATAGGTTAGA+AGG | + | Chr5:58772441-58772460 | None:intergenic | 20.0% |
| !! | TTATCGTATAAATCTATGTT+AGG | - | Chr5:58773698-58773717 | MsG0580027344.01.T01:intron | 20.0% |
| !! | TTATTTGTCACAATAATAGT+AGG | - | Chr5:58774984-58775003 | MsG0580027344.01.T01:CDS | 20.0% |
| !!! | AGAGATTTGATGTTTTATAT+AGG | + | Chr5:58773484-58773503 | None:intergenic | 20.0% |
| !!! | ATACGATAAACAACTTTTAT+AGG | + | Chr5:58773687-58773706 | None:intergenic | 20.0% |
| !!! | CATATGTTATGTTTGATTTT+TGG | - | Chr5:58773838-58773857 | MsG0580027344.01.T01:intron | 20.0% |
| !!! | CTTTGTTTTGAACATAAATA+AGG | - | Chr5:58773603-58773622 | MsG0580027344.01.T01:intron | 20.0% |
| !!! | TAATTTTTTCAAAAAGTGAG+AGG | - | Chr5:58773970-58773989 | MsG0580027344.01.T01:intron | 20.0% |
| !!! | TTTTTTAGTAAGTCAACATT+TGG | - | Chr5:58774050-58774069 | MsG0580027344.01.T01:intron | 20.0% |
| ! | AACAACTAGTACAAAGAATA+TGG | + | Chr5:58774657-58774676 | None:intergenic | 25.0% |
| ! | AACCTCTTGTATAAAAAACA+GGG | - | Chr5:58773021-58773040 | MsG0580027344.01.T01:intron | 25.0% |
| ! | AATAAAAGCAAACTACGTAA+TGG | + | Chr5:58774431-58774450 | None:intergenic | 25.0% |
| ! | AATTGTATGCATGCAAATTA+AGG | + | Chr5:58773648-58773667 | None:intergenic | 25.0% |
| ! | ATCTATGTTAGGTATTATTG+TGG | - | Chr5:58773709-58773728 | MsG0580027344.01.T01:intron | 25.0% |
| ! | CAACTACTAAACAATATACA+TGG | - | Chr5:58772338-58772357 | MsG0580027344.01.T01:CDS | 25.0% |
| ! | CAAGATTAAAAGTTGCAAAA+GGG | + | Chr5:58774589-58774608 | None:intergenic | 25.0% |
| ! | CATACAATACATCAAATAGT+GGG | - | Chr5:58773052-58773071 | MsG0580027344.01.T01:intron | 25.0% |
| ! | CATATGACCAAATTTATGTT+TGG | + | Chr5:58772731-58772750 | None:intergenic | 25.0% |
| ! | CATGTATATTGTTTAGTAGT+TGG | + | Chr5:58772340-58772359 | None:intergenic | 25.0% |
| ! | CCTCTCAAAAAATCTTAAAA+AGG | + | Chr5:58773125-58773144 | None:intergenic | 25.0% |
| ! | CGATATTTAGTTACTATAAG+TGG | + | Chr5:58773526-58773545 | None:intergenic | 25.0% |
| ! | CTCAAAGAAAAATCTTACAA+AGG | + | Chr5:58773181-58773200 | None:intergenic | 25.0% |
| ! | GAAAGATTGAAATAAACGTT+TGG | + | Chr5:58775261-58775280 | None:intergenic | 25.0% |
| ! | GTTCAAATCATGTAACAATT+TGG | + | Chr5:58773244-58773263 | None:intergenic | 25.0% |
| ! | GTTTATGTTGCTATAAAAAC+AGG | - | Chr5:58772781-58772800 | MsG0580027344.01.T01:intron | 25.0% |
| ! | TAAAAGCCATAACTATGATT+AGG | + | Chr5:58772501-58772520 | None:intergenic | 25.0% |
| ! | TAAGTGAAAATACAAACCTT+TGG | + | Chr5:58772616-58772635 | None:intergenic | 25.0% |
| ! | TATATTGTTTAGTAGTTGGT+GGG | + | Chr5:58772336-58772355 | None:intergenic | 25.0% |
| ! | TCAAGATTAAAAGTTGCAAA+AGG | + | Chr5:58774590-58774609 | None:intergenic | 25.0% |
| ! | TTGATTTATGTTTGGATAGA+TGG | - | Chr5:58772650-58772669 | MsG0580027344.01.T01:intron | 25.0% |
| !! | AAAATGCTTAAACACACTTT+TGG | + | Chr5:58774809-58774828 | None:intergenic | 25.0% |
| !! | GTTTTATATAGGAATGAGAT+TGG | + | Chr5:58773473-58773492 | None:intergenic | 25.0% |
| !!! | AAAAAGGTATAGCTCTAAAT+TGG | + | Chr5:58773109-58773128 | None:intergenic | 25.0% |
| !!! | CCTTTTTAAGATTTTTTGAG+AGG | - | Chr5:58773122-58773141 | MsG0580027344.01.T01:intron | 25.0% |
| !!! | CTTTGAGATGAAATATCATT+AGG | - | Chr5:58773194-58773213 | MsG0580027344.01.T01:intron | 25.0% |
| !!! | CTTTTCTAGGAATTTTAACT+TGG | + | Chr5:58773301-58773320 | None:intergenic | 25.0% |
| !!! | TATTGTTTTATCAGTGTTGA+AGG | - | Chr5:58772361-58772380 | MsG0580027344.01.T01:CDS | 25.0% |
| !!! | TTTGGGTTTTGATTTATGTT+TGG | - | Chr5:58772642-58772661 | MsG0580027344.01.T01:intron | 25.0% |
| AAAAAAAAGGGAAACTTAGG+GGG | - | Chr5:58774763-58774782 | MsG0580027344.01.T01:CDS | 30.0% | |
| AAGGATCTGTATGTTTAGAA+AGG | - | Chr5:58775302-58775321 | MsG0580027344.01.T01:five_prime_UTR | 30.0% | |
| AGAACAATATCTGTCAACTT+AGG | - | Chr5:58772258-58772277 | MsG0580027344.01.T01:three_prime_UTR | 30.0% | |
| ATATATGAACGTTAGTTGAG+TGG | - | Chr5:58772230-58772249 | MsG0580027344.01.T01:three_prime_UTR | 30.0% | |
| CAAAAAAAAGGGAAACTTAG+GGG | - | Chr5:58774762-58774781 | MsG0580027344.01.T01:CDS | 30.0% | |
| CAACCTCTTGTATAAAAAAC+AGG | - | Chr5:58773020-58773039 | MsG0580027344.01.T01:intron | 30.0% | |
| CTACTGCATAATCATTATTG+AGG | + | Chr5:58775106-58775125 | None:intergenic | 30.0% | |
| GCAAAAAAAAGGGAAACTTA+GGG | - | Chr5:58774761-58774780 | MsG0580027344.01.T01:CDS | 30.0% | |
| GCATACAATACATCAAATAG+TGG | - | Chr5:58773051-58773070 | MsG0580027344.01.T01:intron | 30.0% | |
| GTAACTAACAATAGCAGTTT+CGG | + | Chr5:58774131-58774150 | None:intergenic | 30.0% | |
| GTATATTGTTTAGTAGTTGG+TGG | + | Chr5:58772337-58772356 | None:intergenic | 30.0% | |
| TACATTCATATTACCAACTG+TGG | - | Chr5:58775172-58775191 | MsG0580027344.01.T01:five_prime_UTR | 30.0% | |
| TAGCTTCTACAAAATTACAG+CGG | - | Chr5:58773778-58773797 | MsG0580027344.01.T01:intron | 30.0% | |
| TATATGAACGTTAGTTGAGT+GGG | - | Chr5:58772231-58772250 | MsG0580027344.01.T01:three_prime_UTR | 30.0% | |
| TCAAAATCGCAACTAGTAAA+TGG | + | Chr5:58774526-58774545 | None:intergenic | 30.0% | |
| TCAACATGTTGAAGTGAAAA+AGG | + | Chr5:58772291-58772310 | None:intergenic | 30.0% | |
| TCAAGACAATAAAAGCAAGT+GGG | + | Chr5:58774708-58774727 | None:intergenic | 30.0% | |
| TGCAAAAAAAAGGGAAACTT+AGG | - | Chr5:58774760-58774779 | MsG0580027344.01.T01:CDS | 30.0% | |
| TGCAAAAGGGAAAAAACATA+GGG | + | Chr5:58774576-58774595 | None:intergenic | 30.0% | |
| TGCATGCATACAATTTGAAA+AGG | - | Chr5:58773653-58773672 | MsG0580027344.01.T01:intron | 30.0% | |
| TGTCGATCCAAACATAAATT+TGG | - | Chr5:58772721-58772740 | MsG0580027344.01.T01:intron | 30.0% | |
| TTCAAGACAATAAAAGCAAG+TGG | + | Chr5:58774709-58774728 | None:intergenic | 30.0% | |
| TTGCAAAAGGGAAAAAACAT+AGG | + | Chr5:58774577-58774596 | None:intergenic | 30.0% | |
| ! | AACTTTGCTAACTTTTGCAA+TGG | - | Chr5:58775055-58775074 | MsG0580027344.01.T01:CDS | 30.0% |
| ! | AATTGGTTTATCCTCAATTG+AGG | - | Chr5:58773578-58773597 | MsG0580027344.01.T01:intron | 30.0% |
| ! | AGAGCCTATTTAAGATCAAT+TGG | - | Chr5:58773561-58773580 | MsG0580027344.01.T01:intron | 30.0% |
| ! | ATTGCCAATTTAGAGCTATA+AGG | - | Chr5:58772920-58772939 | MsG0580027344.01.T01:intron | 30.0% |
| ! | ATTGGTTTATCCTCAATTGA+GGG | - | Chr5:58773579-58773598 | MsG0580027344.01.T01:intron | 30.0% |
| ! | TAATGTCAATAACCCTCTTT+TGG | + | Chr5:58772850-58772869 | None:intergenic | 30.0% |
| ! | TCAAAGGATTTTCCTCTATT+TGG | - | Chr5:58772556-58772575 | MsG0580027344.01.T01:intron | 30.0% |
| ! | TTGCCAATTTAGAGCTATAA+GGG | - | Chr5:58772921-58772940 | MsG0580027344.01.T01:intron | 30.0% |
| !! | ATTCCTAGAAAAGTATTCCA+TGG | - | Chr5:58773308-58773327 | MsG0580027344.01.T01:intron | 30.0% |
| !! | TATCCCTTATAGCTCTAAAT+TGG | + | Chr5:58772927-58772946 | None:intergenic | 30.0% |
| !! | TTCCTAGAAAAGTATTCCAT+GGG | - | Chr5:58773309-58773328 | MsG0580027344.01.T01:intron | 30.0% |
| !!! | TACCCTGTTTTTTATACAAG+AGG | + | Chr5:58773026-58773045 | None:intergenic | 30.0% |
| !!! | TATGCGATTTTTTGATACGT+AGG | + | Chr5:58774902-58774921 | None:intergenic | 30.0% |
| !!! | TTTTAGAGTATTGAGTCTGA+TGG | - | Chr5:58772754-58772773 | MsG0580027344.01.T01:intron | 30.0% |
| AAAAAAAGGGAAACTTAGGG+GGG | - | Chr5:58774764-58774783 | MsG0580027344.01.T01:CDS | 35.0% | |
| AAAACAAAGTCCCTCAATTG+AGG | + | Chr5:58773592-58773611 | None:intergenic | 35.0% | |
| AAGACAATAAAAGCAAGTGG+GGG | + | Chr5:58774706-58774725 | None:intergenic | 35.0% | |
| ACATATGTTTAGTATGACGG+TGG | + | Chr5:58773825-58773844 | None:intergenic | 35.0% | |
| AGAGCTATAAGGGATAACTT+TGG | - | Chr5:58772931-58772950 | MsG0580027344.01.T01:intron | 35.0% | |
| AGCTTCTACAAAATTACAGC+GGG | - | Chr5:58773779-58773798 | MsG0580027344.01.T01:intron | 35.0% | |
| ATATTACCAACTGTGGCTAA+AGG | - | Chr5:58775179-58775198 | MsG0580027344.01.T01:five_prime_UTR | 35.0% | |
| ATTGTTGTCATGTGACTAGA+AGG | - | Chr5:58772967-58772986 | MsG0580027344.01.T01:intron | 35.0% | |
| CAAGACAATAAAAGCAAGTG+GGG | + | Chr5:58774707-58774726 | None:intergenic | 35.0% | |
| CATATGTTTAGTATGACGGT+GGG | + | Chr5:58773824-58773843 | None:intergenic | 35.0% | |
| GAAAATACAAACCTTTGGCA+TGG | + | Chr5:58772611-58772630 | None:intergenic | 35.0% | |
| GCAAAAGGGAAAAAACATAG+GGG | + | Chr5:58774575-58774594 | None:intergenic | 35.0% | |
| GCTATAAAAACAGGTTCATG+AGG | - | Chr5:58772790-58772809 | MsG0580027344.01.T01:intron | 35.0% | |
| TGCACACCTAATCATAGTTA+TGG | - | Chr5:58772492-58772511 | MsG0580027344.01.T01:intron | 35.0% | |
| TGGCGAATTCAGCAAAATTA+CGG | - | Chr5:58772670-58772689 | MsG0580027344.01.T01:intron | 35.0% | |
| TTGTAAGTCGTAGCTAATCA+AGG | + | Chr5:58775283-58775302 | None:intergenic | 35.0% | |
| ! | CAAAGAATATGGTTTGAGAC+TGG | + | Chr5:58774646-58774665 | None:intergenic | 35.0% |
| ! | CGTTTGGTAATTGCAACTTT+AGG | + | Chr5:58775245-58775264 | None:intergenic | 35.0% |
| ! | GTTCTTTTCTGTGTCTTACA+TGG | + | Chr5:58774301-58774320 | None:intergenic | 35.0% |
| ! | TGATTAGCTACGACTTACAA+AGG | - | Chr5:58775283-58775302 | MsG0580027344.01.T01:five_prime_UTR | 35.0% |
| !! | ATAGCTCTAAATTGGCAATC+AGG | + | Chr5:58773101-58773120 | None:intergenic | 35.0% |
| !! | TAGTTGGTGGGTTAGAAAAA+TGG | + | Chr5:58772324-58772343 | None:intergenic | 35.0% |
| AATCAGGACAATCAGGGTTT+GGG | + | Chr5:58773085-58773104 | None:intergenic | 40.0% | |
| AATTGGCAATCAGGACAATC+AGG | + | Chr5:58773092-58773111 | None:intergenic | 40.0% | |
| AGAATCTTTGTCCATGCCAA+AGG | - | Chr5:58772597-58772616 | MsG0580027344.01.T01:intron | 40.0% | |
| AGACAATAAAAGCAAGTGGG+GGG | + | Chr5:58774705-58774724 | None:intergenic | 40.0% | |
| ATTGGCAATCAGGACAATCA+GGG | + | Chr5:58773091-58773110 | None:intergenic | 40.0% | |
| CAAGCATCAAGAGTTAGCAA+AGG | + | Chr5:58775083-58775102 | None:intergenic | 40.0% | |
| CAGTGAAATTTGCAAAACCG+CGG | + | Chr5:58772703-58772722 | None:intergenic | 40.0% | |
| CCAGTCAAAAATAGTAACGC+TGG | + | Chr5:58774107-58774126 | None:intergenic | 40.0% | |
| CGAATTCAGCAAAATTACGG+TGG | - | Chr5:58772673-58772692 | MsG0580027344.01.T01:intron | 40.0% | |
| GAAATAGCCTGGCATTTGTT+TGG | - | Chr5:58773388-58773407 | MsG0580027344.01.T01:intron | 40.0% | |
| GCTAAACTAGTGCCAAATAG+AGG | + | Chr5:58772571-58772590 | None:intergenic | 40.0% | |
| GGCAAATTATTCCCATCAAC+AGG | - | Chr5:58775210-58775229 | MsG0580027344.01.T01:five_prime_UTR | 40.0% | |
| GTAATTGCAACTTTAGGCAG+AGG | + | Chr5:58775239-58775258 | None:intergenic | 40.0% | |
| TATTCCATGGGAGACAAAGA+GGG | - | Chr5:58773321-58773340 | MsG0580027344.01.T01:intron | 40.0% | |
| TTCCAACACATTCACTTCCA+TGG | + | Chr5:58775138-58775157 | None:intergenic | 40.0% | |
| TTGTGGATACGTCACAATCA+CGG | - | Chr5:58773726-58773745 | MsG0580027344.01.T01:intron | 40.0% | |
| TTTCTAGGTGGAAACCAACA+AGG | + | Chr5:58773372-58773391 | None:intergenic | 40.0% | |
| TTTGCTACCAAACAAATGCC+AGG | + | Chr5:58773398-58773417 | None:intergenic | 40.0% | |
| ! | CTCCCATGGAATACTTTTCT+AGG | + | Chr5:58773314-58773333 | None:intergenic | 40.0% |
| ! | CTTTTCTGTGTCTTACATGG+TGG | + | Chr5:58774298-58774317 | None:intergenic | 40.0% |
| !! | ACAAATGCCAGGCTATTTCT+AGG | + | Chr5:58773387-58773406 | None:intergenic | 40.0% |
| !! | GAGTATTGAGTCTGATGGTT+TGG | - | Chr5:58772759-58772778 | MsG0580027344.01.T01:intron | 40.0% |
| !! | TGGTGGGTTAGAAAAATGGA+TGG | + | Chr5:58772320-58772339 | None:intergenic | 40.0% |
| !!! | CCAGCGTTACTATTTTTGAC+TGG | - | Chr5:58774104-58774123 | MsG0580027344.01.T01:intron | 40.0% |
| CAATCAGGACAATCAGGGTT+TGG | + | Chr5:58773086-58773105 | None:intergenic | 45.0% | |
| CTGTGGCTAAAGGAATCACT+AGG | - | Chr5:58775189-58775208 | MsG0580027344.01.T01:five_prime_UTR | 45.0% | |
| GGTTAGAAGGTTCAATCGCA+TGG | + | Chr5:58772428-58772447 | None:intergenic | 45.0% | |
| GTATTCCATGGGAGACAAAG+AGG | - | Chr5:58773320-58773339 | MsG0580027344.01.T01:intron | 45.0% | |
| GTCCATGGAAGTGAATGTGT+TGG | - | Chr5:58775133-58775152 | MsG0580027344.01.T01:five_prime_UTR | 45.0% | |
| GTGATTCCTTTAGCCACAGT+TGG | + | Chr5:58775188-58775207 | None:intergenic | 45.0% | |
| GTTTCCACCTAGAAATAGCC+TGG | - | Chr5:58773377-58773396 | MsG0580027344.01.T01:intron | 45.0% | |
| ! | AGGGATAACTTTGGTGCAAC+TGG | - | Chr5:58772940-58772959 | MsG0580027344.01.T01:intron | 45.0% |
| !! | AATGCCAGGCTATTTCTAGG+TGG | + | Chr5:58773384-58773403 | None:intergenic | 45.0% |
| !! | AGTGTGAGAAGTGCCAAAAG+AGG | - | Chr5:58772834-58772853 | MsG0580027344.01.T01:intron | 45.0% |
| !! | GTGTGAGAAGTGCCAAAAGA+GGG | - | Chr5:58772835-58772854 | MsG0580027344.01.T01:intron | 45.0% |
| !! | TTATATTATATAAATTCAAT+AGG | + | Chr5:58772449-58772468 | None:intergenic | 5.0% |
| !!! | TAATTTAATTGATTTTTTTT+TGG | + | Chr5:58775024-58775043 | None:intergenic | 5.0% |
| AAAATTACGGTGGCACACCG+CGG | - | Chr5:58772683-58772702 | MsG0580027344.01.T01:intron | 50.0% | |
| AGGACAATCAGGGTTTGGGA+AGG | + | Chr5:58773081-58773100 | None:intergenic | 50.0% | |
| AGGCAGAGGATTCCTGTTGA+TGG | + | Chr5:58775225-58775244 | None:intergenic | 50.0% | |
| AGGGGGGCTAATGCAAAGTT+AGG | - | Chr5:58774780-58774799 | MsG0580027344.01.T01:intron | 50.0% | |
| GACAATCAGGGTTTGGGAAG+GGG | + | Chr5:58773079-58773098 | None:intergenic | 50.0% | |
| GGACAATCAGGGTTTGGGAA+GGG | + | Chr5:58773080-58773099 | None:intergenic | 50.0% | |
| GGCAGAGGATTCCTGTTGAT+GGG | + | Chr5:58775224-58775243 | None:intergenic | 50.0% | |
| GGGGGCTAATGCAAAGTTAG+GGG | - | Chr5:58774782-58774801 | MsG0580027344.01.T01:intron | 50.0% | |
| GGGGGGCTAATGCAAAGTTA+GGG | - | Chr5:58774781-58774800 | MsG0580027344.01.T01:intron | 50.0% | |
| TGCAGTAGAGACAGAGTCCA+TGG | - | Chr5:58775118-58775137 | MsG0580027344.01.T01:five_prime_UTR | 50.0% | |
| TTGGAAGAGGTGGTCCTTGT+TGG | - | Chr5:58773355-58773374 | MsG0580027344.01.T01:intron | 50.0% | |
| CATGGGAGACAAAGAGGGTG+GGG | - | Chr5:58773326-58773345 | MsG0580027344.01.T01:intron | 55.0% | |
| CCATGGGAGACAAAGAGGGT+GGG | - | Chr5:58773325-58773344 | MsG0580027344.01.T01:intron | 55.0% | |
| TCCATGGGAGACAAAGAGGG+TGG | - | Chr5:58773324-58773343 | MsG0580027344.01.T01:intron | 55.0% | |
| AAAGAGGGTGGGGCACACGT+TGG | - | Chr5:58773336-58773355 | MsG0580027344.01.T01:intron | 60.0% | |
| CCCACCCTCTTTGTCTCCCA+TGG | + | Chr5:58773328-58773347 | None:intergenic | 60.0% | |
| GGGGCACACGTTGGAAGAGG+TGG | - | Chr5:58773345-58773364 | MsG0580027344.01.T01:intron | 65.0% | |
| GGTGGGGCACACGTTGGAAG+AGG | - | Chr5:58773342-58773361 | MsG0580027344.01.T01:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr5 | gene | 58772222 | 58775375 | 58772222 | ID=MsG0580027344.01;Name=MsG0580027344.01 |
| Chr5 | mRNA | 58772222 | 58775375 | 58772222 | ID=MsG0580027344.01.T01;Parent=MsG0580027344.01;Name=MsG0580027344.01.T01;_AED=0.49;_eAED=0.49;_QI=289|1|1|1|0|0|3|86|118 |
| Chr5 | exon | 58772222 | 58772474 | 58772222 | ID=MsG0580027344.01.T01:exon:21984;Parent=MsG0580027344.01.T01 |
| Chr5 | exon | 58774713 | 58774794 | 58774713 | ID=MsG0580027344.01.T01:exon:21983;Parent=MsG0580027344.01.T01 |
| Chr5 | five_prime_UTR | 58775087 | 58775375 | 58775087 | ID=MsG0580027344.01.T01:five_prime_utr;Parent=MsG0580027344.01.T01 |
| Chr5 | CDS | 58774979 | 58775086 | 58774979 | ID=MsG0580027344.01.T01:cds;Parent=MsG0580027344.01.T01 |
| Chr5 | CDS | 58774713 | 58774794 | 58774713 | ID=MsG0580027344.01.T01:cds;Parent=MsG0580027344.01.T01 |
| Chr5 | CDS | 58772308 | 58772474 | 58772308 | ID=MsG0580027344.01.T01:cds;Parent=MsG0580027344.01.T01 |
| Chr5 | three_prime_UTR | 58772222 | 58772307 | 58772222 | ID=MsG0580027344.01.T01:three_prime_utr;Parent=MsG0580027344.01.T01 |
| Chr5 | mRNA | 58774657 | 58775375 | 58774657 | ID=MsG0580027344.01.T02;Parent=MsG0580027344.01;Name=MsG0580027344.01.T02;_AED=0.49;_eAED=0.52;_QI=289|1|0.5|1|0|0|2|0|81 |
| Chr5 | exon | 58774657 | 58774794 | 58774657 | ID=MsG0580027344.01.T02:exon:21985;Parent=MsG0580027344.01.T02 |
| Chr5 | five_prime_UTR | 58775087 | 58775375 | 58775087 | ID=MsG0580027344.01.T02:five_prime_utr;Parent=MsG0580027344.01.T02 |
| Chr5 | CDS | 58774979 | 58775086 | 58774979 | ID=MsG0580027344.01.T02:cds;Parent=MsG0580027344.01.T02 |
| Chr5 | CDS | 58774657 | 58774794 | 58774657 | ID=MsG0580027344.01.T02:cds;Parent=MsG0580027344.01.T02 |
| Gene Sequence |
| Protein sequence |
