Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036880.01.T01 | XP_003621757.1 | 99.557 | 451 | 2 | 0 | 1 | 451 | 1 | 451 | 0 | 924 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036880.01.T01 | Q8LJW3 | 57.174 | 453 | 181 | 6 | 7 | 451 | 4 | 451 | 0 | 516 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036880.01.T01 | G7KUS8 | 99.557 | 451 | 2 | 0 | 1 | 451 | 1 | 451 | 0.0 | 924 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048683.01 | MsG0780036880.01 | 0.804271 | 2.340638e-49 | 1.201636e-46 |
| MsG0080049147.01 | MsG0780036880.01 | 0.813402 | 2.606783e-51 | 1.700740e-48 |
| MsG0180000355.01 | MsG0780036880.01 | 0.803211 | 3.884316e-49 | 1.940591e-46 |
| MsG0180000482.01 | MsG0780036880.01 | 0.820731 | 5.874658e-53 | 4.686074e-50 |
| MsG0180000794.01 | MsG0780036880.01 | 0.801140 | 1.036413e-48 | 4.912632e-46 |
| MsG0180003821.01 | MsG0780036880.01 | 0.808180 | 3.515824e-50 | 1.996749e-47 |
| MsG0180003885.01 | MsG0780036880.01 | 0.805423 | 1.344763e-49 | 7.111641e-47 |
| MsG0180004493.01 | MsG0780036880.01 | 0.848479 | 5.972901e-60 | 1.097705e-56 |
| MsG0180004500.01 | MsG0780036880.01 | 0.802533 | 5.361890e-49 | 2.632852e-46 |
| MsG0180005220.01 | MsG0780036880.01 | 0.818561 | 1.838245e-52 | 1.380651e-49 |
| MsG0180005240.01 | MsG0780036880.01 | 0.829467 | 5.064703e-55 | 5.187889e-52 |
| MsG0180005429.01 | MsG0780036880.01 | 0.813847 | 2.080449e-51 | 1.373742e-48 |
| MsG0180005913.01 | MsG0780036880.01 | 0.814456 | 1.526918e-51 | 1.025039e-48 |
| MsG0180006025.01 | MsG0780036880.01 | 0.815043 | 1.131679e-51 | 7.718471e-49 |
| MsG0180006096.01 | MsG0780036880.01 | 0.833782 | 4.375655e-56 | 5.091583e-53 |
| MsG0180006104.01 | MsG0780036880.01 | 0.811516 | 6.733125e-51 | 4.176545e-48 |
| MsG0280010598.01 | MsG0780036880.01 | 0.817514 | 3.169475e-52 | 2.313068e-49 |
| MsG0280010599.01 | MsG0780036880.01 | 0.812333 | 4.469728e-51 | 2.834094e-48 |
| MsG0280010900.01 | MsG0780036880.01 | 0.809575 | 1.768121e-50 | 1.041950e-47 |
| MsG0280010916.01 | MsG0780036880.01 | 0.802467 | 5.534021e-49 | 2.712832e-46 |
| MsG0280011333.01 | MsG0780036880.01 | 0.800550 | 1.367663e-48 | 6.386163e-46 |
| MsG0280011371.01 | MsG0780036880.01 | 0.823116 | 1.647338e-53 | 1.405628e-50 |
| MsG0280011376.01 | MsG0780036880.01 | 0.832113 | 1.137425e-55 | 1.259080e-52 |
| MsG0380012005.01 | MsG0780036880.01 | 0.820294 | 7.399387e-53 | 5.831408e-50 |
| MsG0380013853.01 | MsG0780036880.01 | 0.829293 | 5.582437e-55 | 5.690394e-52 |
| MsG0380014706.01 | MsG0780036880.01 | 0.825743 | 3.969678e-54 | 3.649960e-51 |
| MsG0680030992.01 | MsG0780036880.01 | 0.822159 | 2.750094e-53 | 2.283479e-50 |
| MsG0680031597.01 | MsG0780036880.01 | -0.814458 | 1.524960e-51 | 1.023795e-48 |
| MsG0680031815.01 | MsG0780036880.01 | 0.812347 | 4.438484e-51 | 2.815281e-48 |
| MsG0680033465.01 | MsG0780036880.01 | 0.807239 | 5.569252e-50 | 3.086038e-47 |
| MsG0480018911.01 | MsG0780036880.01 | 0.839367 | 1.653742e-57 | 2.278781e-54 |
| MsG0480020024.01 | MsG0780036880.01 | 0.818485 | 1.912983e-52 | 1.433822e-49 |
| MsG0480020788.01 | MsG0780036880.01 | 0.823288 | 1.501219e-53 | 1.287118e-50 |
| MsG0480020887.01 | MsG0780036880.01 | 0.827861 | 1.238021e-54 | 1.210063e-51 |
| MsG0480021492.01 | MsG0780036880.01 | 0.804875 | 1.750968e-49 | 9.131413e-47 |
| MsG0480023251.01 | MsG0780036880.01 | 0.807709 | 4.428300e-50 | 2.483864e-47 |
| MsG0480023384.01 | MsG0780036880.01 | 0.802401 | 5.708673e-49 | 2.793869e-46 |
| MsG0580024161.01 | MsG0780036880.01 | 0.824239 | 8.987579e-54 | 7.915538e-51 |
| MsG0580026032.01 | MsG0780036880.01 | 0.804343 | 2.260513e-49 | 1.162697e-46 |
| MsG0380015166.01 | MsG0780036880.01 | 0.802957 | 4.384378e-49 | 2.176244e-46 |
| MsG0380015220.01 | MsG0780036880.01 | 0.821403 | 4.114253e-53 | 3.343837e-50 |
| MsG0380015533.01 | MsG0780036880.01 | 0.810168 | 1.317858e-50 | 7.887719e-48 |
| MsG0380016740.01 | MsG0780036880.01 | 0.834975 | 2.196546e-56 | 2.649078e-53 |
| MsG0380017085.01 | MsG0780036880.01 | 0.800928 | 1.145054e-48 | 5.398507e-46 |
| MsG0380018022.01 | MsG0780036880.01 | 0.808683 | 2.745005e-50 | 1.579547e-47 |
| MsG0580028551.01 | MsG0780036880.01 | 0.809166 | 2.164263e-50 | 1.261537e-47 |
| MsG0580029376.01 | MsG0780036880.01 | 0.803865 | 2.842971e-49 | 1.444477e-46 |
| MsG0580029879.01 | MsG0780036880.01 | 0.839970 | 1.152319e-57 | 1.617862e-54 |
| MsG0580029919.01 | MsG0780036880.01 | 0.845407 | 4.141182e-59 | 6.894221e-56 |
| MsG0680030515.01 | MsG0780036880.01 | 0.822477 | 2.320453e-53 | 1.944384e-50 |
| MsG0680030555.01 | MsG0780036880.01 | 0.848406 | 6.256409e-60 | 1.146996e-56 |
| MsG0280007165.01 | MsG0780036880.01 | -0.809771 | 1.604595e-50 | 9.505291e-48 |
| MsG0280007480.01 | MsG0780036880.01 | 0.809120 | 2.213309e-50 | 1.288575e-47 |
| MsG0280007756.01 | MsG0780036880.01 | 0.805095 | 1.574769e-49 | 8.258295e-47 |
| MsG0280008113.01 | MsG0780036880.01 | 0.801821 | 7.515313e-49 | 3.623965e-46 |
| MsG0280008929.01 | MsG0780036880.01 | 0.818667 | 1.739079e-52 | 1.309973e-49 |
| MsG0280009256.01 | MsG0780036880.01 | 0.800029 | 1.745535e-48 | 8.043679e-46 |
| MsG0280010349.01 | MsG0780036880.01 | 0.805520 | 1.283331e-49 | 6.803483e-47 |
| MsG0280010517.01 | MsG0780036880.01 | 0.818307 | 2.098615e-52 | 1.565230e-49 |
| MsG0780035937.01 | MsG0780036880.01 | 0.822167 | 2.737705e-53 | 2.273698e-50 |
| MsG0780036117.01 | MsG0780036880.01 | 0.821106 | 4.816982e-53 | 3.883042e-50 |
| MsG0780036880.01 | MsG0780036978.01 | 0.823585 | 1.279574e-53 | 1.106362e-50 |
| MsG0780036880.01 | MsG0780037330.01 | 0.826080 | 3.299930e-54 | 3.063317e-51 |
| MsG0780036880.01 | MsG0780038907.01 | 0.832643 | 8.406848e-56 | 9.454295e-53 |
| MsG0780036880.01 | MsG0780039438.01 | 0.803014 | 4.267273e-49 | 2.121050e-46 |
| MsG0780036880.01 | MsG0780040591.01 | 0.803511 | 3.366078e-49 | 1.694796e-46 |
| MsG0780036880.01 | MsG0780040734.01 | 0.811431 | 7.026933e-51 | 4.348972e-48 |
| MsG0780036880.01 | MsG0780041387.01 | 0.809052 | 2.288803e-50 | 1.330041e-47 |
| MsG0780036880.01 | MsG0780041729.01 | -0.826208 | 3.078147e-54 | 2.867880e-51 |
| MsG0780036880.01 | MsG0780041734.01 | -0.811279 | 7.579313e-51 | 4.671782e-48 |
| MsG0780036880.01 | MsG0780041747.01 | 0.816463 | 5.460342e-52 | 3.871488e-49 |
| MsG0780036880.01 | MsG0880042700.01 | 0.815671 | 8.202039e-52 | 5.691376e-49 |
| MsG0780036880.01 | MsG0880044005.01 | 0.801901 | 7.235074e-49 | 3.496020e-46 |
| MsG0780036880.01 | MsG0880045765.01 | 0.803667 | 3.124368e-49 | 1.579300e-46 |
| MsG0780036880.01 | MsG0880047055.01 | -0.819155 | 1.347557e-52 | 1.028799e-49 |
| MsG0780036880.01 | MsG0880047696.01 | 0.817771 | 2.774547e-52 | 2.039171e-49 |
| MsG0780036880.01 | MsG0880047703.01 | 0.804975 | 1.668514e-49 | 8.723239e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036880.01.T01 | MTR_7g022470 | 99.557 | 451 | 2 | 0 | 1 | 451 | 1 | 451 | 0.0 | 924 |
| MsG0780036880.01.T01 | MTR_5g047260 | 58.537 | 451 | 174 | 5 | 4 | 451 | 11 | 451 | 0.0 | 514 |
| MsG0780036880.01.T01 | MTR_7g028050 | 56.027 | 448 | 185 | 5 | 10 | 451 | 1 | 442 | 6.39e-175 | 497 |
| MsG0780036880.01.T01 | MTR_3g088885 | 55.257 | 409 | 171 | 5 | 10 | 409 | 9 | 414 | 3.30e-158 | 455 |
| MsG0780036880.01.T01 | MTR_5g011580 | 51.570 | 446 | 198 | 5 | 12 | 451 | 8 | 441 | 3.85e-152 | 439 |
| MsG0780036880.01.T01 | MTR_4g101950 | 50.776 | 451 | 194 | 5 | 12 | 451 | 8 | 441 | 8.26e-152 | 439 |
| MsG0780036880.01.T01 | MTR_1g029520 | 51.852 | 432 | 189 | 8 | 26 | 441 | 254 | 682 | 1.74e-144 | 428 |
| MsG0780036880.01.T01 | MTR_5g047260 | 57.746 | 355 | 145 | 3 | 4 | 358 | 11 | 360 | 5.27e-142 | 410 |
| MsG0780036880.01.T01 | MTR_7g028050 | 55.942 | 345 | 140 | 5 | 113 | 451 | 1 | 339 | 1.29e-129 | 378 |
| MsG0780036880.01.T01 | MTR_5g015170 | 43.662 | 426 | 217 | 6 | 10 | 413 | 9 | 433 | 3.00e-120 | 360 |
| MsG0780036880.01.T01 | MTR_5g047260 | 57.756 | 303 | 124 | 2 | 4 | 306 | 11 | 309 | 5.06e-120 | 353 |
| MsG0780036880.01.T01 | MTR_4g097380 | 38.877 | 463 | 260 | 5 | 10 | 449 | 28 | 490 | 1.01e-104 | 320 |
| MsG0780036880.01.T01 | MTR_1g012740 | 30.769 | 169 | 99 | 4 | 226 | 393 | 17 | 168 | 2.12e-20 | 88.6 |
| MsG0780036880.01.T01 | MTR_7g102330 | 23.398 | 359 | 237 | 12 | 36 | 371 | 20 | 363 | 5.51e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780036880.01.T01 | AT1G69040 | 57.174 | 453 | 181 | 6 | 7 | 451 | 8 | 455 | 0.0 | 516 |
| MsG0780036880.01.T01 | AT1G69040 | 57.174 | 453 | 181 | 6 | 7 | 451 | 4 | 451 | 0.0 | 516 |
| MsG0780036880.01.T01 | AT3G01990 | 57.393 | 399 | 162 | 3 | 11 | 407 | 3 | 395 | 5.50e-163 | 467 |
| MsG0780036880.01.T01 | AT3G01990 | 57.393 | 399 | 162 | 3 | 11 | 407 | 3 | 395 | 5.50e-163 | 467 |
| MsG0780036880.01.T01 | AT3G01990 | 57.393 | 399 | 162 | 3 | 11 | 407 | 17 | 409 | 5.51e-163 | 467 |
| MsG0780036880.01.T01 | AT3G01990 | 57.393 | 399 | 162 | 3 | 11 | 407 | 17 | 409 | 5.51e-163 | 467 |
| MsG0780036880.01.T01 | AT3G01990 | 57.393 | 399 | 162 | 3 | 11 | 407 | 17 | 409 | 8.80e-163 | 467 |
| MsG0780036880.01.T01 | AT3G01990 | 57.393 | 399 | 162 | 3 | 11 | 407 | 3 | 395 | 9.38e-163 | 466 |
| MsG0780036880.01.T01 | AT2G03730 | 53.407 | 455 | 194 | 6 | 7 | 449 | 8 | 456 | 6.02e-162 | 465 |
| MsG0780036880.01.T01 | AT2G03730 | 53.407 | 455 | 194 | 6 | 7 | 449 | 8 | 456 | 6.02e-162 | 465 |
| MsG0780036880.01.T01 | AT1G76990 | 55.501 | 409 | 169 | 4 | 10 | 409 | 9 | 413 | 5.90e-160 | 460 |
| MsG0780036880.01.T01 | AT1G76990 | 55.501 | 409 | 169 | 4 | 10 | 409 | 9 | 413 | 5.90e-160 | 460 |
| MsG0780036880.01.T01 | AT1G76990 | 55.501 | 409 | 169 | 4 | 10 | 409 | 9 | 413 | 5.90e-160 | 460 |
| MsG0780036880.01.T01 | AT1G76990 | 55.501 | 409 | 169 | 4 | 10 | 409 | 9 | 413 | 5.90e-160 | 460 |
| MsG0780036880.01.T01 | AT1G76990 | 55.501 | 409 | 169 | 4 | 10 | 409 | 9 | 413 | 5.90e-160 | 460 |
| MsG0780036880.01.T01 | AT1G12420 | 50.222 | 450 | 198 | 8 | 12 | 451 | 8 | 441 | 8.69e-141 | 410 |
| MsG0780036880.01.T01 | AT5G25320 | 43.763 | 489 | 220 | 11 | 10 | 444 | 9 | 496 | 1.26e-138 | 407 |
| MsG0780036880.01.T01 | AT4G22780 | 46.957 | 460 | 202 | 10 | 12 | 449 | 8 | 447 | 2.38e-134 | 394 |
| MsG0780036880.01.T01 | AT4G22780 | 30.409 | 171 | 104 | 2 | 10 | 178 | 218 | 375 | 2.98e-11 | 65.5 |
| MsG0780036880.01.T01 | AT4G22780 | 46.957 | 460 | 202 | 10 | 12 | 449 | 8 | 447 | 2.38e-134 | 394 |
| MsG0780036880.01.T01 | AT4G22780 | 30.409 | 171 | 104 | 2 | 10 | 178 | 218 | 375 | 2.98e-11 | 65.5 |
| MsG0780036880.01.T01 | AT5G25320 | 44.105 | 458 | 203 | 9 | 39 | 444 | 1 | 457 | 2.87e-134 | 395 |
| MsG0780036880.01.T01 | AT3G01990 | 56.287 | 334 | 138 | 3 | 11 | 342 | 17 | 344 | 8.46e-128 | 374 |
| MsG0780036880.01.T01 | AT3G01990 | 56.287 | 334 | 138 | 3 | 11 | 342 | 3 | 330 | 1.16e-127 | 373 |
| MsG0780036880.01.T01 | AT3G01990 | 56.839 | 329 | 134 | 3 | 11 | 337 | 17 | 339 | 1.83e-127 | 373 |
| MsG0780036880.01.T01 | AT5G65890 | 45.863 | 423 | 204 | 9 | 10 | 409 | 10 | 430 | 1.27e-120 | 360 |
| MsG0780036880.01.T01 | AT5G65890 | 45.863 | 423 | 204 | 9 | 10 | 409 | 10 | 430 | 1.27e-120 | 360 |
| MsG0780036880.01.T01 | AT1G12420 | 48.571 | 385 | 172 | 8 | 77 | 451 | 1 | 369 | 4.18e-109 | 327 |
| MsG0780036880.01.T01 | AT3G01990 | 54.762 | 294 | 125 | 3 | 11 | 302 | 17 | 304 | 2.24e-105 | 316 |
| MsG0780036880.01.T01 | AT3G01990 | 54.762 | 294 | 125 | 3 | 11 | 302 | 3 | 290 | 3.35e-105 | 315 |
| MsG0780036880.01.T01 | AT5G25320 | 43.169 | 366 | 169 | 8 | 10 | 337 | 9 | 373 | 2.70e-102 | 310 |
| MsG0780036880.01.T01 | AT5G65890 | 43.684 | 380 | 189 | 9 | 53 | 409 | 1 | 378 | 1.29e-101 | 310 |
| MsG0780036880.01.T01 | AT5G65890 | 43.684 | 380 | 189 | 9 | 53 | 409 | 1 | 378 | 1.29e-101 | 310 |
| MsG0780036880.01.T01 | AT5G65890 | 43.791 | 306 | 154 | 6 | 120 | 409 | 13 | 316 | 1.46e-82 | 259 |
| MsG0780036880.01.T01 | AT2G39570 | 22.599 | 354 | 247 | 10 | 37 | 371 | 21 | 366 | 2.69e-11 | 65.5 |
Find 104 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTGTACCTTTGAAAAT+TGG | 0.118377 | 7:-15600668 | None:intergenic |
| TTCTGTTCTGTTTCAAACTA+TGG | 0.197312 | 7:+15600784 | MsG0780036880.01.T01:exon |
| ATCTGATGGTGGATGGTTTA+TGG | 0.205537 | 7:+15601210 | MsG0780036880.01.T01:CDS |
| TTTCATGTTACTGATCAAAA+TGG | 0.211096 | 7:+15601380 | MsG0780036880.01.T01:CDS |
| TTCACTCTTAACTGGATTTC+CGG | 0.229487 | 7:-15603734 | None:intergenic |
| ATGCTAGATCTTTCTAGATT+TGG | 0.259892 | 7:+15604015 | MsG0780036880.01.T01:three_prime_UTR |
| GGTGTAAAGCTAGAACTTTC+TGG | 0.279122 | 7:+15603583 | MsG0780036880.01.T01:CDS |
| TCGATTGTTTCACTCTTAAC+TGG | 0.286946 | 7:-15603742 | None:intergenic |
| CAGAACAACAACTTTGATAA+AGG | 0.291767 | 7:+15601000 | MsG0780036880.01.T01:CDS |
| GGGTAGGGTGGCTCCTAAGC+AGG | 0.308746 | 7:-15600582 | None:intergenic |
| TTTATCTAGGCATGTTTCAT+TGG | 0.353143 | 7:+15604077 | MsG0780036880.01.T01:three_prime_UTR |
| CCGCTACCACATTGCATTTG+AGG | 0.353645 | 7:-15602163 | None:intergenic |
| TCTTTGTACCTTTGAAAATT+GGG | 0.357409 | 7:-15600667 | None:intergenic |
| TAACAAACCTGATATGCTTC+TGG | 0.364001 | 7:-15602611 | None:intergenic |
| GAGAGGTTTCTTTACAATCT+AGG | 0.372115 | 7:+15603883 | MsG0780036880.01.T01:CDS |
| TGAAGGACCAGAAGCATATC+AGG | 0.375822 | 7:+15602604 | MsG0780036880.01.T01:CDS |
| AATAGTAACTTCGGTCGATC+TGG | 0.375903 | 7:-15602521 | None:intergenic |
| CATACAACAATCGAGTTAAC+AGG | 0.381023 | 7:+15602092 | MsG0780036880.01.T01:CDS |
| TCTCTTTACGCGATCTCGTT+AGG | 0.382598 | 7:+15603851 | MsG0780036880.01.T01:CDS |
| GATCGGAAGCTACGAACTCT+TGG | 0.409696 | 7:-15602032 | None:intergenic |
| AAGACTTCTGAAAGCAATCC+TGG | 0.415942 | 7:-15602125 | None:intergenic |
| AGGAGCTCTTGGCCCTGCTT+AGG | 0.418501 | 7:+15600569 | None:intergenic |
| CTTTCTGCTTCAGAACTGAT+TGG | 0.421013 | 7:-15603193 | None:intergenic |
| TTATCTAGGCATGTTTCATT+GGG | 0.431278 | 7:+15604078 | MsG0780036880.01.T01:three_prime_UTR |
| CATAGAAAACATTCATGGCT+TGG | 0.432509 | 7:-15603699 | None:intergenic |
| TTCATGTTACTGATCAAAAT+GGG | 0.434204 | 7:+15601381 | MsG0780036880.01.T01:CDS |
| TGTTGATGATTGCATCGATA+AGG | 0.441678 | 7:+15602472 | MsG0780036880.01.T01:CDS |
| CGCGATTATGACATATATGA+TGG | 0.445224 | 7:+15602404 | MsG0780036880.01.T01:CDS |
| ATTTGGTTGGGAGATAGAAT+TGG | 0.446485 | 7:-15600615 | None:intergenic |
| TTAATCTTGGCAAGGCGGTC+AGG | 0.450576 | 7:-15602266 | None:intergenic |
| TGTCACATAGAAAACATTCA+TGG | 0.454766 | 7:-15603704 | None:intergenic |
| TGTAGCTGATAGAATTCAAC+AGG | 0.458713 | 7:+15601424 | MsG0780036880.01.T01:CDS |
| GTTGATGATTGCATCGATAA+GGG | 0.464974 | 7:+15602473 | MsG0780036880.01.T01:CDS |
| AGATAGAATTGGTGAGATGA+TGG | 0.465467 | 7:-15600604 | None:intergenic |
| TCGAGTTAACAGGACGAGAT+AGG | 0.466550 | 7:+15602102 | MsG0780036880.01.T01:CDS |
| AAGCAGAAGATGCTTAATCT+TGG | 0.477322 | 7:-15602279 | None:intergenic |
| GCAAAGAGTGATTCACTGCT+TGG | 0.478238 | 7:+15603216 | MsG0780036880.01.T01:CDS |
| ATATTTCATCTGATGGTGGA+TGG | 0.481369 | 7:+15601203 | MsG0780036880.01.T01:CDS |
| TATTACATAAGGCATGTAGA+TGG | 0.487737 | 7:+15603166 | MsG0780036880.01.T01:CDS |
| TACATCACCGACGACACAAC+AGG | 0.487849 | 7:+15602227 | MsG0780036880.01.T01:CDS |
| TAATAAACGTGGTAGTTTGT+TGG | 0.488332 | 7:+15601132 | MsG0780036880.01.T01:CDS |
| ATAGAAAACATTCATGGCTT+GGG | 0.492504 | 7:-15603698 | None:intergenic |
| GATAGAATTGGTGAGATGAT+GGG | 0.501454 | 7:-15600603 | None:intergenic |
| CTTCAGCTTTGACAGTTCCA+TGG | 0.502072 | 7:-15602586 | None:intergenic |
| GCTTGGAGGCGGCTGTCCGA+AGG | 0.504243 | 7:+15603233 | MsG0780036880.01.T01:CDS |
| ACATGTTATTGTTACCTTGG+TGG | 0.506079 | 7:-15600869 | None:intergenic |
| GTACCTCAGAAGTTCGCCTT+CGG | 0.506198 | 7:-15603249 | None:intergenic |
| ACTCGCATCTTTAGAGAAAA+CGG | 0.512341 | 7:+15603637 | MsG0780036880.01.T01:CDS |
| AGAGCTTATATTTCATCTGA+TGG | 0.514352 | 7:+15601196 | MsG0780036880.01.T01:CDS |
| CATGCTTAAAATCTCCTACT+CGG | 0.515376 | 7:+15603815 | MsG0780036880.01.T01:CDS |
| TTTGTTCGACTCACAAGGAT+AGG | 0.516487 | 7:+15602354 | MsG0780036880.01.T01:CDS |
| ATTGGTGAGATGATGGGGTA+GGG | 0.517260 | 7:-15600597 | None:intergenic |
| GATATACTGTCGTGAATTTG+AGG | 0.518923 | 7:+15602495 | MsG0780036880.01.T01:CDS |
| ATGCTTAAAATCTCCTACTC+GGG | 0.524227 | 7:+15603816 | MsG0780036880.01.T01:CDS |
| CGGCAATCCTGTTGTGTCGT+CGG | 0.534641 | 7:-15602234 | None:intergenic |
| TGCGAGTTACATCAGACAAA+AGG | 0.535705 | 7:-15603621 | None:intergenic |
| GTAGCTTCCGATCCGTGAGA+AGG | 0.538013 | 7:+15602042 | MsG0780036880.01.T01:CDS |
| GAGGCTGTCCGAAAAGAGAT+CGG | 0.548441 | 7:+15603763 | MsG0780036880.01.T01:CDS |
| GGTAGGGTGGCTCCTAAGCA+GGG | 0.549461 | 7:-15600581 | None:intergenic |
| ATAGAATTGGTGAGATGATG+GGG | 0.550082 | 7:-15600602 | None:intergenic |
| CGCGCTGAGGTCACGACAAG+AGG | 0.553071 | 7:+15603673 | MsG0780036880.01.T01:CDS |
| CCTCAAATGCAATGTGGTAG+CGG | 0.554458 | 7:+15602163 | MsG0780036880.01.T01:CDS |
| AGGCTGTCCGAAAAGAGATC+GGG | 0.555702 | 7:+15603764 | MsG0780036880.01.T01:CDS |
| CAATCAGTTCTGAAGCAGAA+AGG | 0.556036 | 7:+15603194 | MsG0780036880.01.T01:CDS |
| TTCTATGTGACAGATGTGTC+CGG | 0.558668 | 7:+15603715 | MsG0780036880.01.T01:CDS |
| AGTGATTCACTGCTTGGAGG+CGG | 0.562796 | 7:+15603222 | MsG0780036880.01.T01:CDS |
| TTTCAAATTCATCATCAAGA+GGG | 0.563709 | 7:-15600826 | None:intergenic |
| AAGAGTGATTCACTGCTTGG+AGG | 0.565511 | 7:+15603219 | MsG0780036880.01.T01:CDS |
| AATTGGTGAGATGATGGGGT+AGG | 0.566950 | 7:-15600598 | None:intergenic |
| CTTTCTGGTGAAGATAGAGT+TGG | 0.570419 | 7:+15603598 | MsG0780036880.01.T01:CDS |
| TGTCCGAAGGCGAACTTCTG+AGG | 0.571161 | 7:+15603246 | MsG0780036880.01.T01:CDS |
| GTGGACACACAATTCAAGAA+TGG | 0.573678 | 7:+15602193 | MsG0780036880.01.T01:CDS |
| CCTCAGCGCGGCAGACTGAA+AGG | 0.576827 | 7:-15603660 | None:intergenic |
| GTTCGACTCACAAGGATAGG+AGG | 0.577855 | 7:+15602357 | MsG0780036880.01.T01:CDS |
| AAATCTCCTACTCGGGAGAG+TGG | 0.589711 | 7:+15603823 | MsG0780036880.01.T01:CDS |
| AATCTCCTACTCGGGAGAGT+GGG | 0.599463 | 7:+15603824 | MsG0780036880.01.T01:CDS |
| TAGATTGTAAAGAAACCTCT+CGG | 0.604791 | 7:-15603881 | None:intergenic |
| GGTGAGATGATGGGGTAGGG+TGG | 0.605342 | 7:-15600594 | None:intergenic |
| CCTTTCAGTCTGCCGCGCTG+AGG | 0.608957 | 7:+15603660 | MsG0780036880.01.T01:CDS |
| TTAACAGGACGAGATAGGCC+AGG | 0.610170 | 7:+15602107 | MsG0780036880.01.T01:CDS |
| AATTTCCCACTCTCCCGAGT+AGG | 0.617638 | 7:-15603829 | None:intergenic |
| TGTCGGTGTTCAAGCTGCAG+CGG | 0.618267 | 7:+15602067 | MsG0780036880.01.T01:CDS |
| CGACAGACCTTCTCACGGAT+CGG | 0.618439 | 7:-15602049 | None:intergenic |
| GCTTATATTTCATCTGATGG+TGG | 0.619057 | 7:+15601199 | MsG0780036880.01.T01:CDS |
| CATGGAACTGTCAAAGCTGA+AGG | 0.619554 | 7:+15602587 | MsG0780036880.01.T01:CDS |
| AGGCGGTCAGGATTGTCGAT+CGG | 0.626180 | 7:-15602254 | None:intergenic |
| ATGTGGTAGCGGCTGAAGTG+TGG | 0.627090 | 7:+15602174 | MsG0780036880.01.T01:CDS |
| GATGGTGGATGGTTTATGGA+TGG | 0.634152 | 7:+15601214 | MsG0780036880.01.T01:CDS |
| CGATCCGTGAGAAGGTCTGT+CGG | 0.637568 | 7:+15602050 | MsG0780036880.01.T01:CDS |
| GAAGATGCTTAATCTTGGCA+AGG | 0.637572 | 7:-15602274 | None:intergenic |
| AGTGTTGTGTTGTGTCTCTG+TGG | 0.638496 | 7:-15600705 | None:intergenic |
| AACACCGACAGACCTTCTCA+CGG | 0.640709 | 7:-15602054 | None:intergenic |
| ACAGTATCGAATAGTAACTT+CGG | 0.644224 | 7:-15602530 | None:intergenic |
| GCATAAAACACTACAATGTG+AGG | 0.647500 | 7:-15603996 | None:intergenic |
| CTTCTGCTTTATGTGCTGAG+AGG | 0.660385 | 7:+15602293 | MsG0780036880.01.T01:CDS |
| ATGCAGTATGTTGTGTACCA+TGG | 0.674170 | 7:+15602569 | MsG0780036880.01.T01:CDS |
| AGACAACAAGTATATGACAC+AGG | 0.684297 | 7:-15604119 | None:intergenic |
| GATGCTTAATCTTGGCAAGG+CGG | 0.685591 | 7:-15602271 | None:intergenic |
| AGTTAAGAGTGAAACAATCG+AGG | 0.702931 | 7:+15603744 | MsG0780036880.01.T01:CDS |
| GTTGATAGTGCTAATAAACG+TGG | 0.727553 | 7:+15601121 | MsG0780036880.01.T01:CDS |
| TGCTGACCTCAAATGCAATG+TGG | 0.737650 | 7:+15602157 | MsG0780036880.01.T01:CDS |
| TCGTTAGGTCGAGATCCGAG+AGG | 0.772248 | 7:+15603866 | MsG0780036880.01.T01:CDS |
| CTCTTGTCGTGACCTCAGCG+CGG | 0.773509 | 7:-15603672 | None:intergenic |
| TAATTCGTATGAATCCACCA+AGG | 0.787268 | 7:+15600855 | MsG0780036880.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATAATAAAATTAGCAA+AGG | - | Chr7:15602860-15602879 | None:intergenic | 10.0% |
| !!! | TTGATATTTTCTTATTTTAT+CGG | + | Chr7:15601543-15601562 | MsG0780036880.01.T01:intron | 10.0% |
| !! | AAATGAAGAATTATTGTAAA+TGG | - | Chr7:15601253-15601272 | None:intergenic | 15.0% |
| !!! | ATTTGTTATGATTGTAATTT+AGG | + | Chr7:15601493-15601512 | MsG0780036880.01.T01:intron | 15.0% |
| !!! | CATCTTTTTTTTTTGATATA+GGG | + | Chr7:15603562-15603581 | MsG0780036880.01.T01:intron | 15.0% |
| !!! | GATCTTTTTAAAATATTGTT+TGG | - | Chr7:15602739-15602758 | None:intergenic | 15.0% |
| !!! | TCATCTTTTTTTTTTGATAT+AGG | + | Chr7:15603561-15603580 | MsG0780036880.01.T01:intron | 15.0% |
| !!! | TTTGAAATTTAAACCTTATA+AGG | + | Chr7:15601023-15601042 | MsG0780036880.01.T01:intron | 15.0% |
| !! | AAGAGTAATATAAACTATCA+TGG | - | Chr7:15601734-15601753 | None:intergenic | 20.0% |
| !! | AATCTTTGATGAATTTCAAA+AGG | + | Chr7:15601050-15601069 | MsG0780036880.01.T01:intron | 20.0% |
| !! | AATGAAGAAGAAAAATTAAC+TGG | + | Chr7:15604191-15604210 | MsG0780036880.01.T01:three_prime_UTR | 20.0% |
| !! | ATCTTTGATGAATTTCAAAA+GGG | + | Chr7:15601051-15601070 | MsG0780036880.01.T01:intron | 20.0% |
| !! | ATGAAGAAGAAAAATTAACT+GGG | + | Chr7:15604192-15604211 | MsG0780036880.01.T01:three_prime_UTR | 20.0% |
| !! | TCAAAGATTATAACCTTATA+AGG | - | Chr7:15601039-15601058 | None:intergenic | 20.0% |
| !! | TGCTAAAACAAGTATTAATT+TGG | - | Chr7:15603285-15603304 | None:intergenic | 20.0% |
| !!! | AAAAAAAAAAGTACTAGTTC+TGG | - | Chr7:15601940-15601959 | None:intergenic | 20.0% |
| !!! | AAACAAGTATTAATTTGGAA+CGG | - | Chr7:15603280-15603299 | None:intergenic | 20.0% |
| !!! | AACTAGTACTTTTTTTTTTG+AGG | + | Chr7:15601941-15601960 | MsG0780036880.01.T01:intron | 20.0% |
| !!! | AGAAGCTTATTTCAAATTTT+TGG | - | Chr7:15604170-15604189 | None:intergenic | 20.0% |
| !!! | CTTTTATATTGAGGTAAAAT+CGG | - | Chr7:15601694-15601713 | None:intergenic | 20.0% |
| !!! | GTTATTAGTAAACAAAGTTT+TGG | - | Chr7:15601980-15601999 | None:intergenic | 20.0% |
| !!! | TAAAAAAGAGCTTATCTTTT+AGG | + | Chr7:15602764-15602783 | MsG0780036880.01.T01:intron | 20.0% |
| !!! | TGTTTACTAATAACACTTTT+TGG | + | Chr7:15601986-15602005 | MsG0780036880.01.T01:intron | 20.0% |
| !!! | TTGTATGTTTTTGTATTTTG+TGG | + | Chr7:15600950-15600969 | MsG0780036880.01.T01:intron | 20.0% |
| !!! | TTTTACAGGAATATTACATA+AGG | + | Chr7:15603155-15603174 | MsG0780036880.01.T01:intron | 20.0% |
| ! | CATGCATTTATCAATAAAGA+GGG | + | Chr7:15603440-15603459 | MsG0780036880.01.T01:intron | 25.0% |
| ! | GAAGAATTATTGTAAATGGT+AGG | - | Chr7:15601249-15601268 | None:intergenic | 25.0% |
| ! | GATGTGTTATAATGATAAAG+CGG | - | Chr7:15603334-15603353 | None:intergenic | 25.0% |
| ! | GTATAAACTTACTAGATACA+AGG | + | Chr7:15602786-15602805 | MsG0780036880.01.T01:intron | 25.0% |
| ! | GTTATTCATGTTCTTGTAAT+TGG | + | Chr7:15602630-15602649 | MsG0780036880.01.T01:intron | 25.0% |
| ! | TAGATCTGTGTAATATTCAT+CGG | + | Chr7:15601450-15601469 | MsG0780036880.01.T01:intron | 25.0% |
| ! | TTCATGTTACTGATCAAAAT+GGG | + | Chr7:15601381-15601400 | MsG0780036880.01.T01:CDS | 25.0% |
| ! | TTCCTTAAAAAAAGACGTTA+CGG | + | Chr7:15602708-15602727 | MsG0780036880.01.T01:intron | 25.0% |
| ! | TTTAATGATAACTTGAGTGA+TGG | - | Chr7:15603112-15603131 | None:intergenic | 25.0% |
| ! | TTTCAAATTCATCATCAAGA+GGG | - | Chr7:15600829-15600848 | None:intergenic | 25.0% |
| ! | TTTCATGTTACTGATCAAAA+TGG | + | Chr7:15601380-15601399 | MsG0780036880.01.T01:CDS | 25.0% |
| !! | GCATTTCATTTCAATTTGTT+TGG | + | Chr7:15603042-15603061 | MsG0780036880.01.T01:intron | 25.0% |
| !! | TCAATTTTCGTCATACTATT+CGG | + | Chr7:15601781-15601800 | MsG0780036880.01.T01:intron | 25.0% |
| !! | TCTTTGTACCTTTGAAAATT+GGG | - | Chr7:15600670-15600689 | None:intergenic | 25.0% |
| !! | TGTGATCAACTTTTATATTG+AGG | - | Chr7:15601703-15601722 | None:intergenic | 25.0% |
| !! | TGTTTCAAACTATGGATTTT+TGG | + | Chr7:15600792-15600811 | MsG0780036880.01.T01:exon | 25.0% |
| !! | TTCTTTGTACCTTTGAAAAT+TGG | - | Chr7:15600671-15600690 | None:intergenic | 25.0% |
| !! | TTTTCAAATTCATCATCAAG+AGG | - | Chr7:15600830-15600849 | None:intergenic | 25.0% |
| !! | TTTTCATGTGAATTTTGTGT+AGG | + | Chr7:15601099-15601118 | MsG0780036880.01.T01:intron | 25.0% |
| !!! | GATTTGTGTTTTTTTTTTGG+GGG | - | Chr7:15600648-15600667 | None:intergenic | 25.0% |
| !!! | GGATTTGTGTTTTTTTTTTG+GGG | - | Chr7:15600649-15600668 | None:intergenic | 25.0% |
| !!! | GGGATTTGTGTTTTTTTTTT+GGG | - | Chr7:15600650-15600669 | None:intergenic | 25.0% |
| !!! | TAATTTTGAAGTAGCTTTTG+TGG | + | Chr7:15602975-15602994 | MsG0780036880.01.T01:intron | 25.0% |
| !!! | TAGATTGTAGAGTTTTATCT+AGG | + | Chr7:15604064-15604083 | MsG0780036880.01.T01:three_prime_UTR | 25.0% |
| !!! | TGGGATTTGTGTTTTTTTTT+TGG | - | Chr7:15600651-15600670 | None:intergenic | 25.0% |
| ACCTTAAACGACTGTTAATT+TGG | + | Chr7:15603493-15603512 | MsG0780036880.01.T01:intron | 30.0% | |
| AGAACATGTTATTGTTACCT+TGG | - | Chr7:15600875-15600894 | None:intergenic | 30.0% | |
| AGAGCTTATATTTCATCTGA+TGG | + | Chr7:15601196-15601215 | MsG0780036880.01.T01:CDS | 30.0% | |
| ATAGAAAACATTCATGGCTT+GGG | - | Chr7:15603701-15603720 | None:intergenic | 30.0% | |
| ATCATCCTATTCCAATCAAA+AGG | - | Chr7:15601820-15601839 | None:intergenic | 30.0% | |
| ATGCTAGATCTTTCTAGATT+TGG | + | Chr7:15604015-15604034 | MsG0780036880.01.T01:three_prime_UTR | 30.0% | |
| CAAATTCGATCATTCTATCA+GGG | + | Chr7:15602888-15602907 | MsG0780036880.01.T01:intron | 30.0% | |
| CAGAACAACAACTTTGATAA+AGG | + | Chr7:15601000-15601019 | MsG0780036880.01.T01:CDS | 30.0% | |
| GCATGCATTTATCAATAAAG+AGG | + | Chr7:15603439-15603458 | MsG0780036880.01.T01:intron | 30.0% | |
| TACGCAAATATTAAGAGAAG+AGG | - | Chr7:15603470-15603489 | None:intergenic | 30.0% | |
| TAGAAAGGATTTGTCAGAAT+AGG | - | Chr7:15603076-15603095 | None:intergenic | 30.0% | |
| TAGATTGTAAAGAAACCTCT+CGG | - | Chr7:15603884-15603903 | None:intergenic | 30.0% | |
| TATTACATAAGGCATGTAGA+TGG | + | Chr7:15603166-15603185 | MsG0780036880.01.T01:CDS | 30.0% | |
| TCAAATTCGATCATTCTATC+AGG | + | Chr7:15602887-15602906 | MsG0780036880.01.T01:intron | 30.0% | |
| TCCAAATTAACAGTCGTTTA+AGG | - | Chr7:15603497-15603516 | None:intergenic | 30.0% | |
| TGTCACATAGAAAACATTCA+TGG | - | Chr7:15603707-15603726 | None:intergenic | 30.0% | |
| TTATCTAGGCATGTTTCATT+GGG | + | Chr7:15604078-15604097 | MsG0780036880.01.T01:three_prime_UTR | 30.0% | |
| TTCTGTTCTGTTTCAAACTA+TGG | + | Chr7:15600784-15600803 | MsG0780036880.01.T01:exon | 30.0% | |
| TTTATCTAGGCATGTTTCAT+TGG | + | Chr7:15604077-15604096 | MsG0780036880.01.T01:three_prime_UTR | 30.0% | |
| ! | AAGTATTAATTTGGAACGGA+GGG | - | Chr7:15603276-15603295 | None:intergenic | 30.0% |
| ! | ACACAAATCCCAATTTTCAA+AGG | + | Chr7:15600659-15600678 | MsG0780036880.01.T01:five_prime_UTR | 30.0% |
| ! | ACAGTATCGAATAGTAACTT+CGG | - | Chr7:15602533-15602552 | None:intergenic | 30.0% |
| ! | TAATAAACGTGGTAGTTTGT+TGG | + | Chr7:15601132-15601151 | MsG0780036880.01.T01:CDS | 30.0% |
| !!! | AACCGTAACGTCTTTTTTTA+AGG | - | Chr7:15602713-15602732 | None:intergenic | 30.0% |
| !!! | TGTGTTTTGCTTTGTTTTAC+AGG | + | Chr7:15603141-15603160 | MsG0780036880.01.T01:intron | 30.0% |
| AAGCAGAAGATGCTTAATCT+TGG | - | Chr7:15602282-15602301 | None:intergenic | 35.0% | |
| AAGCATATTTCCATGATTCC+CGG | + | Chr7:15601597-15601616 | MsG0780036880.01.T01:intron | 35.0% | |
| ACATGTTATTGTTACCTTGG+TGG | - | Chr7:15600872-15600891 | None:intergenic | 35.0% | |
| AGACAACAAGTATATGACAC+AGG | - | Chr7:15604122-15604141 | None:intergenic | 35.0% | |
| AGAGAAGCTCAAAATAAGTC+AGG | - | Chr7:15602687-15602706 | None:intergenic | 35.0% | |
| AGATAGAATTGGTGAGATGA+TGG | - | Chr7:15600607-15600626 | None:intergenic | 35.0% | |
| AGTTAAGAGTGAAACAATCG+AGG | + | Chr7:15603744-15603763 | MsG0780036880.01.T01:CDS | 35.0% | |
| ATAGAATTGGTGAGATGATG+GGG | - | Chr7:15600605-15600624 | None:intergenic | 35.0% | |
| ATGCTTAAAATCTCCTACTC+GGG | + | Chr7:15603816-15603835 | MsG0780036880.01.T01:CDS | 35.0% | |
| ATTTGGTTGGGAGATAGAAT+TGG | - | Chr7:15600618-15600637 | None:intergenic | 35.0% | |
| CATACAACAATCGAGTTAAC+AGG | + | Chr7:15602092-15602111 | MsG0780036880.01.T01:CDS | 35.0% | |
| CATAGAAAACATTCATGGCT+TGG | - | Chr7:15603702-15603721 | None:intergenic | 35.0% | |
| CATGCTTAAAATCTCCTACT+CGG | + | Chr7:15603815-15603834 | MsG0780036880.01.T01:CDS | 35.0% | |
| CGCGATTATGACATATATGA+TGG | + | Chr7:15602404-15602423 | MsG0780036880.01.T01:CDS | 35.0% | |
| CTATTCCAATCAAAAGGCAA+TGG | - | Chr7:15601814-15601833 | None:intergenic | 35.0% | |
| GAGAGGTTTCTTTACAATCT+AGG | + | Chr7:15603883-15603902 | MsG0780036880.01.T01:CDS | 35.0% | |
| GATAGAATTGGTGAGATGAT+GGG | - | Chr7:15600606-15600625 | None:intergenic | 35.0% | |
| GATATACTGTCGTGAATTTG+AGG | + | Chr7:15602495-15602514 | MsG0780036880.01.T01:CDS | 35.0% | |
| GCATAAAACACTACAATGTG+AGG | - | Chr7:15603999-15604018 | None:intergenic | 35.0% | |
| GCTTATATTTCATCTGATGG+TGG | + | Chr7:15601199-15601218 | MsG0780036880.01.T01:CDS | 35.0% | |
| TAACAAACCTGATATGCTTC+TGG | - | Chr7:15602614-15602633 | None:intergenic | 35.0% | |
| TAATTCGTATGAATCCACCA+AGG | + | Chr7:15600855-15600874 | MsG0780036880.01.T01:CDS | 35.0% | |
| TCGATTGTTTCACTCTTAAC+TGG | - | Chr7:15603745-15603764 | None:intergenic | 35.0% | |
| TGTAGCTGATAGAATTCAAC+AGG | + | Chr7:15601424-15601443 | MsG0780036880.01.T01:CDS | 35.0% | |
| TTCACTCTTAACTGGATTTC+CGG | - | Chr7:15603737-15603756 | None:intergenic | 35.0% | |
| TTTGTGGCCAAAATAAGGTA+GGG | + | Chr7:15602991-15603010 | MsG0780036880.01.T01:intron | 35.0% | |
| ! | ACTCGCATCTTTAGAGAAAA+CGG | + | Chr7:15603637-15603656 | MsG0780036880.01.T01:CDS | 35.0% |
| ! | CAAGTATTAATTTGGAACGG+AGG | - | Chr7:15603277-15603296 | None:intergenic | 35.0% |
| ! | TAGCTTTTGTGGCCAAAATA+AGG | + | Chr7:15602986-15603005 | MsG0780036880.01.T01:intron | 35.0% |
| ! | TTTAGCCATTGCCTTTTGAT+TGG | + | Chr7:15601806-15601825 | MsG0780036880.01.T01:intron | 35.0% |
| ! | TTTTGTGGCCAAAATAAGGT+AGG | + | Chr7:15602990-15603009 | MsG0780036880.01.T01:intron | 35.0% |
| !! | ATATTTCATCTGATGGTGGA+TGG | + | Chr7:15601203-15601222 | MsG0780036880.01.T01:CDS | 35.0% |
| !! | CATTGCCTTTTGATTGGAAT+AGG | + | Chr7:15601812-15601831 | MsG0780036880.01.T01:intron | 35.0% |
| !! | GTTGATAGTGCTAATAAACG+TGG | + | Chr7:15601121-15601140 | MsG0780036880.01.T01:CDS | 35.0% |
| !! | GTTGATGATTGCATCGATAA+GGG | + | Chr7:15602473-15602492 | MsG0780036880.01.T01:CDS | 35.0% |
| !! | TGTTGATGATTGCATCGATA+AGG | + | Chr7:15602472-15602491 | MsG0780036880.01.T01:CDS | 35.0% |
| !!! | TGTTTTTTTTTTGGGGGCTT+TGG | - | Chr7:15600642-15600661 | None:intergenic | 35.0% |
| AATAGTAACTTCGGTCGATC+TGG | - | Chr7:15602524-15602543 | None:intergenic | 40.0% | |
| AGTACTACACATGACATGGA+TGG | + | Chr7:15603522-15603541 | MsG0780036880.01.T01:intron | 40.0% | |
| ATGCAGTATGTTGTGTACCA+TGG | + | Chr7:15602569-15602588 | MsG0780036880.01.T01:CDS | 40.0% | |
| CTTTCTGCTTCAGAACTGAT+TGG | - | Chr7:15603196-15603215 | None:intergenic | 40.0% | |
| GAAGATGCTTAATCTTGGCA+AGG | - | Chr7:15602277-15602296 | None:intergenic | 40.0% | |
| GGTGTAAAGCTAGAACTTTC+TGG | + | Chr7:15603583-15603602 | MsG0780036880.01.T01:CDS | 40.0% | |
| GTGGACACACAATTCAAGAA+TGG | + | Chr7:15602193-15602212 | MsG0780036880.01.T01:CDS | 40.0% | |
| TGAGGTAAAATCGGCAAATG+TGG | - | Chr7:15601685-15601704 | None:intergenic | 40.0% | |
| TGCGAGTTACATCAGACAAA+AGG | - | Chr7:15603624-15603643 | None:intergenic | 40.0% | |
| TGTGAGTACTACACATGACA+TGG | + | Chr7:15603518-15603537 | MsG0780036880.01.T01:intron | 40.0% | |
| TTCTATGTGACAGATGTGTC+CGG | + | Chr7:15603715-15603734 | MsG0780036880.01.T01:CDS | 40.0% | |
| TTTGTTCGACTCACAAGGAT+AGG | + | Chr7:15602354-15602373 | MsG0780036880.01.T01:CDS | 40.0% | |
| ! | AAGACTTCTGAAAGCAATCC+TGG | - | Chr7:15602128-15602147 | None:intergenic | 40.0% |
| ! | ATTTTGTGGCAGAGTAACTG+TGG | + | Chr7:15600964-15600983 | MsG0780036880.01.T01:intron | 40.0% |
| ! | CGAGTAGGAGATTTTAAGCA+TGG | - | Chr7:15603817-15603836 | None:intergenic | 40.0% |
| ! | CTTTCTGGTGAAGATAGAGT+TGG | + | Chr7:15603598-15603617 | MsG0780036880.01.T01:CDS | 40.0% |
| ! | GTTTTCTTGTTCCAGTCACT+CGG | + | Chr7:15602008-15602027 | MsG0780036880.01.T01:intron | 40.0% |
| ! | TAGTCAACCCGATCTCTTTT+CGG | - | Chr7:15603774-15603793 | None:intergenic | 40.0% |
| !! | ATCTGATGGTGGATGGTTTA+TGG | + | Chr7:15601210-15601229 | MsG0780036880.01.T01:CDS | 40.0% |
| !! | CAATCAGTTCTGAAGCAGAA+AGG | + | Chr7:15603194-15603213 | MsG0780036880.01.T01:CDS | 40.0% |
| !! | CAGTTTGCCCTACCTTATTT+TGG | - | Chr7:15603001-15603020 | None:intergenic | 40.0% |
| !! | TTCGTTTTGTTCGACTCACA+AGG | + | Chr7:15602349-15602368 | MsG0780036880.01.T01:CDS | 40.0% |
| !!! | GTGCGTGTGTGTGTTTTTTT+GGG | - | Chr7:15600746-15600765 | None:intergenic | 40.0% |
| !!! | TGCGTGTGTGTGTTTTTTTG+GGG | - | Chr7:15600745-15600764 | None:intergenic | 40.0% |
| !!! | TGTGCGTGTGTGTGTTTTTT+TGG | - | Chr7:15600747-15600766 | None:intergenic | 40.0% |
| !!! | TTTTTGGGGGCTTTGGAATT+TGG | - | Chr7:15600635-15600654 | None:intergenic | 40.0% |
| AAGAGTGATTCACTGCTTGG+AGG | + | Chr7:15603219-15603238 | MsG0780036880.01.T01:CDS | 45.0% | |
| AGTGTTGTGTTGTGTCTCTG+TGG | - | Chr7:15600708-15600727 | None:intergenic | 45.0% | |
| CATGGAACTGTCAAAGCTGA+AGG | + | Chr7:15602587-15602606 | MsG0780036880.01.T01:CDS | 45.0% | |
| CCTCAAATGCAATGTGGTAG+CGG | + | Chr7:15602163-15602182 | MsG0780036880.01.T01:CDS | 45.0% | |
| CTTCTGCTTTATGTGCTGAG+AGG | + | Chr7:15602293-15602312 | MsG0780036880.01.T01:CDS | 45.0% | |
| GATGCTTAATCTTGGCAAGG+CGG | - | Chr7:15602274-15602293 | None:intergenic | 45.0% | |
| GCAAAGAGTGATTCACTGCT+TGG | + | Chr7:15603216-15603235 | MsG0780036880.01.T01:CDS | 45.0% | |
| GGACTCATAAGCTGGTAGAA+AGG | - | Chr7:15603091-15603110 | None:intergenic | 45.0% | |
| TCGAGTTAACAGGACGAGAT+AGG | + | Chr7:15602102-15602121 | MsG0780036880.01.T01:CDS | 45.0% | |
| TCTCTTTACGCGATCTCGTT+AGG | + | Chr7:15603851-15603870 | MsG0780036880.01.T01:CDS | 45.0% | |
| TGCTGACCTCAAATGCAATG+TGG | + | Chr7:15602157-15602176 | MsG0780036880.01.T01:CDS | 45.0% | |
| ! | CTTCAGCTTTGACAGTTCCA+TGG | - | Chr7:15602589-15602608 | None:intergenic | 45.0% |
| ! | TGAAGGACCAGAAGCATATC+AGG | + | Chr7:15602604-15602623 | MsG0780036880.01.T01:CDS | 45.0% |
| !! | AATTGGTGAGATGATGGGGT+AGG | - | Chr7:15600601-15600620 | None:intergenic | 45.0% |
| !! | ATTGGTGAGATGATGGGGTA+GGG | - | Chr7:15600600-15600619 | None:intergenic | 45.0% |
| !! | GATGGTGGATGGTTTATGGA+TGG | + | Chr7:15601214-15601233 | MsG0780036880.01.T01:CDS | 45.0% |
| !! | TGAGTGATGGACTCATAAGC+TGG | - | Chr7:15603099-15603118 | None:intergenic | 45.0% |
| !! | AAAAAATATTAAAAAAACAA+TGG | - | Chr7:15601296-15601315 | None:intergenic | 5.0% |
| AAATCTCCTACTCGGGAGAG+TGG | + | Chr7:15603823-15603842 | MsG0780036880.01.T01:CDS | 50.0% | |
| AACACCGACAGACCTTCTCA+CGG | - | Chr7:15602057-15602076 | None:intergenic | 50.0% | |
| AATCTCCTACTCGGGAGAGT+GGG | + | Chr7:15603824-15603843 | MsG0780036880.01.T01:CDS | 50.0% | |
| AATTTCCCACTCTCCCGAGT+AGG | - | Chr7:15603832-15603851 | None:intergenic | 50.0% | |
| AGGCTGTCCGAAAAGAGATC+GGG | + | Chr7:15603764-15603783 | MsG0780036880.01.T01:CDS | 50.0% | |
| AGTGATTCACTGCTTGGAGG+CGG | + | Chr7:15603222-15603241 | MsG0780036880.01.T01:CDS | 50.0% | |
| CCGCTACCACATTGCATTTG+AGG | - | Chr7:15602166-15602185 | None:intergenic | 50.0% | |
| CGACATCGCAACCACAATTG+CGG | + | Chr7:15601659-15601678 | MsG0780036880.01.T01:intron | 50.0% | |
| GAGGCTGTCCGAAAAGAGAT+CGG | + | Chr7:15603763-15603782 | MsG0780036880.01.T01:CDS | 50.0% | |
| GATCGGAAGCTACGAACTCT+TGG | - | Chr7:15602035-15602054 | None:intergenic | 50.0% | |
| GTACCTCAGAAGTTCGCCTT+CGG | - | Chr7:15603252-15603271 | None:intergenic | 50.0% | |
| GTTCGACTCACAAGGATAGG+AGG | + | Chr7:15602357-15602376 | MsG0780036880.01.T01:CDS | 50.0% | |
| TACATCACCGACGACACAAC+AGG | + | Chr7:15602227-15602246 | MsG0780036880.01.T01:CDS | 50.0% | |
| TTAACAGGACGAGATAGGCC+AGG | + | Chr7:15602107-15602126 | MsG0780036880.01.T01:CDS | 50.0% | |
| TTAATCTTGGCAAGGCGGTC+AGG | - | Chr7:15602269-15602288 | None:intergenic | 50.0% | |
| ! | AGACCGATTTATTGCTGCCG+CGG | - | Chr7:15601624-15601643 | None:intergenic | 50.0% |
| !! | GGGGGCTTTGGAATTTGGTT+GGG | - | Chr7:15600630-15600649 | None:intergenic | 50.0% |
| !! | TGGGGGCTTTGGAATTTGGT+TGG | - | Chr7:15600631-15600650 | None:intergenic | 50.0% |
| AGGCGGTCAGGATTGTCGAT+CGG | - | Chr7:15602257-15602276 | None:intergenic | 55.0% | |
| ATTTATTGCTGCCGCGGACC+GGG | - | Chr7:15601618-15601637 | None:intergenic | 55.0% | |
| CGACAGACCTTCTCACGGAT+CGG | - | Chr7:15602052-15602071 | None:intergenic | 55.0% | |
| CGATCCGTGAGAAGGTCTGT+CGG | + | Chr7:15602050-15602069 | MsG0780036880.01.T01:CDS | 55.0% | |
| CGGCAATCCTGTTGTGTCGT+CGG | - | Chr7:15602237-15602256 | None:intergenic | 55.0% | |
| GAACTCTTGGACCGAGTGAC+TGG | - | Chr7:15602022-15602041 | None:intergenic | 55.0% | |
| GATTTATTGCTGCCGCGGAC+CGG | - | Chr7:15601619-15601638 | None:intergenic | 55.0% | |
| GGCAAATGTGGCCGCAATTG+TGG | - | Chr7:15601673-15601692 | None:intergenic | 55.0% | |
| GGTCCGCGGCAGCAATAAAT+CGG | + | Chr7:15601618-15601637 | MsG0780036880.01.T01:intron | 55.0% | |
| GTAGCTTCCGATCCGTGAGA+AGG | + | Chr7:15602042-15602061 | MsG0780036880.01.T01:CDS | 55.0% | |
| TCGTTAGGTCGAGATCCGAG+AGG | + | Chr7:15603866-15603885 | MsG0780036880.01.T01:CDS | 55.0% | |
| TGTCCGAAGGCGAACTTCTG+AGG | + | Chr7:15603246-15603265 | MsG0780036880.01.T01:CDS | 55.0% | |
| TTTCCATGATTCCCGGTCCG+CGG | + | Chr7:15601604-15601623 | MsG0780036880.01.T01:intron | 55.0% | |
| ! | TGTCGGTGTTCAAGCTGCAG+CGG | + | Chr7:15602067-15602086 | MsG0780036880.01.T01:CDS | 55.0% |
| !! | ATGTGGTAGCGGCTGAAGTG+TGG | + | Chr7:15602174-15602193 | MsG0780036880.01.T01:CDS | 55.0% |
| CTCTTGTCGTGACCTCAGCG+CGG | - | Chr7:15603675-15603694 | None:intergenic | 60.0% | |
| GGTAGGGTGGCTCCTAAGCA+GGG | - | Chr7:15600584-15600603 | None:intergenic | 60.0% | |
| !! | GGTGAGATGATGGGGTAGGG+TGG | - | Chr7:15600597-15600616 | None:intergenic | 60.0% |
| CCTCAGCGCGGCAGACTGAA+AGG | - | Chr7:15603663-15603682 | None:intergenic | 65.0% | |
| CCTTTCAGTCTGCCGCGCTG+AGG | + | Chr7:15603660-15603679 | MsG0780036880.01.T01:CDS | 65.0% | |
| CGCGCTGAGGTCACGACAAG+AGG | + | Chr7:15603673-15603692 | MsG0780036880.01.T01:CDS | 65.0% | |
| GGGTAGGGTGGCTCCTAAGC+AGG | - | Chr7:15600585-15600604 | None:intergenic | 65.0% | |
| CTGCCGCGGACCGGGAATCA+TGG | - | Chr7:15601610-15601629 | None:intergenic | 70.0% | |
| GCTTGGAGGCGGCTGTCCGA+AGG | + | Chr7:15603233-15603252 | MsG0780036880.01.T01:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 15600579 | 15604212 | 15600579 | ID=MsG0780036880.01;Name=MsG0780036880.01 |
| Chr7 | mRNA | 15600579 | 15604212 | 15600579 | ID=MsG0780036880.01.T01;Parent=MsG0780036880.01;Name=MsG0780036880.01.T01;_AED=0.26;_eAED=0.26;_QI=224|1|1|1|1|1|7|285|451 |
| Chr7 | exon | 15600579 | 15600876 | 15600579 | ID=MsG0780036880.01.T01:exon:3104;Parent=MsG0780036880.01.T01 |
| Chr7 | exon | 15600976 | 15601021 | 15600976 | ID=MsG0780036880.01.T01:exon:3105;Parent=MsG0780036880.01.T01 |
| Chr7 | exon | 15601121 | 15601235 | 15601121 | ID=MsG0780036880.01.T01:exon:3106;Parent=MsG0780036880.01.T01 |
| Chr7 | exon | 15601378 | 15601445 | 15601378 | ID=MsG0780036880.01.T01:exon:3107;Parent=MsG0780036880.01.T01 |
| Chr7 | exon | 15602023 | 15602625 | 15602023 | ID=MsG0780036880.01.T01:exon:3108;Parent=MsG0780036880.01.T01 |
| Chr7 | exon | 15603163 | 15603267 | 15603163 | ID=MsG0780036880.01.T01:exon:3109;Parent=MsG0780036880.01.T01 |
| Chr7 | exon | 15603583 | 15604212 | 15603583 | ID=MsG0780036880.01.T01:exon:3110;Parent=MsG0780036880.01.T01 |
| Chr7 | five_prime_UTR | 15600579 | 15600802 | 15600579 | ID=MsG0780036880.01.T01:five_prime_utr;Parent=MsG0780036880.01.T01 |
| Chr7 | CDS | 15600803 | 15600876 | 15600803 | ID=MsG0780036880.01.T01:cds;Parent=MsG0780036880.01.T01 |
| Chr7 | CDS | 15600976 | 15601021 | 15600976 | ID=MsG0780036880.01.T01:cds;Parent=MsG0780036880.01.T01 |
| Chr7 | CDS | 15601121 | 15601235 | 15601121 | ID=MsG0780036880.01.T01:cds;Parent=MsG0780036880.01.T01 |
| Chr7 | CDS | 15601378 | 15601445 | 15601378 | ID=MsG0780036880.01.T01:cds;Parent=MsG0780036880.01.T01 |
| Chr7 | CDS | 15602023 | 15602625 | 15602023 | ID=MsG0780036880.01.T01:cds;Parent=MsG0780036880.01.T01 |
| Chr7 | CDS | 15603163 | 15603267 | 15603163 | ID=MsG0780036880.01.T01:cds;Parent=MsG0780036880.01.T01 |
| Chr7 | CDS | 15603583 | 15603927 | 15603583 | ID=MsG0780036880.01.T01:cds;Parent=MsG0780036880.01.T01 |
| Chr7 | three_prime_UTR | 15603928 | 15604212 | 15603928 | ID=MsG0780036880.01.T01:three_prime_utr;Parent=MsG0780036880.01.T01 |
| Gene Sequence |
| Protein sequence |
