AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0480021077.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021077.01.T01 MTR_2g098160 74.332 187 33 3 191 377 1 172 6.29e-95 281
MsG0480021077.01.T01 MTR_4g065570 83.439 157 6 1 221 377 1 137 2.45e-88 263
MsG0480021077.01.T01 MTR_7g092400 56.757 185 64 3 193 377 92 260 2.60e-68 216
MsG0480021077.01.T01 MTR_0249s0070 55.676 185 63 3 193 377 4 169 3.63e-65 205
MsG0480021077.01.T01 MTR_0249s0070 55.676 185 63 3 193 377 12 177 4.92e-65 205
MsG0480021077.01.T01 MTR_7g104320 40.909 176 87 4 202 377 10 168 6.77e-37 132
MsG0480021077.01.T01 MTR_4g053440 39.130 184 96 4 194 377 3 170 1.12e-36 131
MsG0480021077.01.T01 MTR_2g086190 39.884 173 72 4 205 377 10 150 4.80e-36 129
MsG0480021077.01.T01 MTR_1g060380 42.703 185 74 6 194 377 3 156 1.10e-32 120
MsG0480021077.01.T01 MTR_8g036980 65.574 61 21 0 317 377 91 151 7.67e-25 99.4
MsG0480021077.01.T01 MTR_3g028010 59.016 61 25 0 317 377 103 163 1.06e-21 91.3
MsG0480021077.01.T01 MTR_1g100773 31.579 171 82 5 205 375 3 138 2.39e-21 89.4
MsG0480021077.01.T01 MTR_7g114920 31.176 170 75 4 205 374 3 130 5.57e-21 88.2
MsG0480021077.01.T01 MTR_3g025570 68.085 47 15 0 309 355 1 47 4.56e-20 85.1
MsG0480021077.01.T01 MTR_2g054650 30.409 171 70 4 205 375 4 125 6.10e-16 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0480021077.01.T01 AT1G51200 59.358 187 62 5 191 377 1 173 5.68e-60 192
MsG0480021077.01.T01 AT1G51200 59.358 187 62 5 191 377 1 173 5.68e-60 192
MsG0480021077.01.T01 AT1G51200 59.358 187 62 5 191 377 1 173 5.68e-60 192
MsG0480021077.01.T01 AT1G51200 59.358 187 62 5 191 377 1 173 5.68e-60 192
MsG0480021077.01.T01 AT2G36320 40.659 182 72 4 202 377 10 161 1.37e-38 136
MsG0480021077.01.T01 AT2G27580 38.728 173 87 3 205 377 10 163 8.31e-37 131
MsG0480021077.01.T01 AT2G27580 38.728 173 87 3 205 377 10 163 8.31e-37 131
MsG0480021077.01.T01 AT4G12040 37.912 182 90 5 201 377 12 175 2.57e-36 130
MsG0480021077.01.T01 AT4G12040 37.912 182 90 5 201 377 12 175 2.57e-36 130
MsG0480021077.01.T01 AT1G12440 38.068 176 89 1 202 377 13 168 6.54e-36 129
MsG0480021077.01.T01 AT1G12440 38.068 176 89 1 202 377 13 168 6.54e-36 129
MsG0480021077.01.T01 AT1G12440 38.068 176 89 1 202 377 13 168 6.54e-36 129
MsG0480021077.01.T01 AT4G22820 36.416 173 95 2 205 377 19 176 2.67e-34 125
MsG0480021077.01.T01 AT4G22820 36.416 173 95 2 205 377 19 176 2.67e-34 125
MsG0480021077.01.T01 AT3G52800 40.957 188 87 5 194 377 3 170 1.95e-32 120
MsG0480021077.01.T01 AT3G52800 40.957 188 87 5 194 377 3 170 1.95e-32 120
MsG0480021077.01.T01 AT3G12630 37.349 166 67 5 213 377 31 160 5.15e-26 102
MsG0480021077.01.T01 AT4G14225 34.104 173 62 3 205 377 5 125 2.85e-24 97.1
MsG0480021077.01.T01 AT4G25380 28.409 176 65 4 208 377 10 130 1.78e-20 86.7

Find 111 sgRNAs with CRISPR-Local

Find 721 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCCCTGGTTGAAACTATTT+TGG 0.137428 4:+53039556 MsG0480021077.01.T01:CDS
ATAGGGAAATATCTGCATTT+TGG 0.216237 4:+53049130 MsG0480021077.01.T01:three_prime_UTR
AAGTTTCATGCCCATCTTAT+TGG 0.217382 4:+53049063 MsG0480021077.01.T01:three_prime_UTR
TGTTCTCGTTGTCGGATTAT+TGG 0.250396 4:+53039093 MsG0480021077.01.T01:CDS
CACGCGCCTTGCATGGGTTA+TGG 0.298496 4:+53038738 MsG0480021077.01.T01:CDS
GGGTACTTGGTCTTGGTCAT+AGG 0.300871 4:+53049112 MsG0480021077.01.T01:three_prime_UTR
AAAGGCTTAGAGATAGTTTC+AGG 0.302295 4:-53048731 None:intergenic
GTATCTTGGCCCTAGTGTTT+AGG 0.317239 4:+53049179 MsG0480021077.01.T01:three_prime_UTR
AGCTTCTCAGCCTTGACAAC+CGG 0.320370 4:-53048962 None:intergenic
AATTGAGCATAACATATCTA+AGG 0.333417 4:-53049023 None:intergenic
GTTTCAGCATCATGTCTTTG+TGG 0.367335 4:-53048544 None:intergenic
AAGGAGAAGGAGAACCTAAA+AGG 0.370673 4:+53039222 MsG0480021077.01.T01:CDS
CTTGACAACCGGGTTTGCTT+TGG 0.380130 4:-53048951 None:intergenic
AAGGCGCGTGTCCTCCTTAG+AGG 0.397262 4:-53038725 None:intergenic
TTGCAGTTGCTGCAACGTTT+CGG 0.398329 4:-53048806 None:intergenic
CAGTGGTGAGCTCAATTGTT+TGG 0.399968 4:+53046736 MsG0480021077.01.T01:intron
ACGCGCCTTGCATGGGTTAT+GGG 0.402562 4:+53038739 MsG0480021077.01.T01:CDS
ATTGGTGAAAATATGTATCT+TGG 0.410336 4:+53049165 MsG0480021077.01.T01:three_prime_UTR
ATGCACAATATAGGACCTTC+AGG 0.411208 4:-53048467 None:intergenic
AATAAGATGGGCATGAAACT+TGG 0.411213 4:-53049061 None:intergenic
GCTTAGATTGTATTTATTGT+GGG 0.412178 4:+53049317 MsG0480021077.01.T01:three_prime_UTR
TCCCTTGGAAATATTATGAA+TGG 0.415286 4:+53048593 MsG0480021077.01.T01:CDS
AGTTTCAGGTTCCACAGAAA+TGG 0.422622 4:-53048717 None:intergenic
CAACGTTTCGGACCATCCTT+CGG 0.423721 4:-53048794 None:intergenic
CAAAGACATGATGCTGAAAC+AGG 0.424095 4:+53048547 MsG0480021077.01.T01:CDS
CTTTATCATATTATATGTGA+TGG 0.425298 4:+53049090 MsG0480021077.01.T01:three_prime_UTR
AATAAGCGAGTTGGTTTGAC+AGG 0.426782 4:+53048827 MsG0480021077.01.T01:CDS
TGCTTAGATTGTATTTATTG+TGG 0.430392 4:+53049316 MsG0480021077.01.T01:three_prime_UTR
TCATCCATGCTAGCTTTATG+AGG 0.433577 4:-53039147 None:intergenic
GCTTGATAAGATGTGAGAAT+TGG 0.435785 4:+53048982 MsG0480021077.01.T01:exon
ATTATATGTGATGGGGTACT+TGG 0.443342 4:+53049099 MsG0480021077.01.T01:three_prime_UTR
AACCGGGTTTGCTTTGGCTA+TGG 0.447808 4:-53048945 None:intergenic
GATAAAGAACACCAATAAGA+TGG 0.448594 4:-53049074 None:intergenic
CAGTTGTTGATGCACAATAT+AGG 0.453708 4:-53048476 None:intergenic
GATTATAGTTTGTAATCGAT+TGG 0.461995 4:+53049360 MsG0480021077.01.T01:three_prime_UTR
GAAGCTGTTCCGTGCAAGTC+AGG 0.462894 4:+53039473 MsG0480021077.01.T01:CDS
TTAGGTTCCACGGAAATGGC+TGG 0.467021 4:-53048671 None:intergenic
TGTACTGGTTTGGTGGAAGT+TGG 0.469222 4:+53049212 MsG0480021077.01.T01:three_prime_UTR
TCAGGTTCCACAGAAATGGC+TGG 0.480113 4:-53048713 None:intergenic
TTAAATATGTACTGGTTTGG+TGG 0.481687 4:+53049205 MsG0480021077.01.T01:three_prime_UTR
GGTACTTGGTCTTGGTCATA+GGG 0.483925 4:+53049113 MsG0480021077.01.T01:three_prime_UTR
GCACTTAGAGCACATGTTCA+TGG 0.487125 4:-53048522 None:intergenic
AGGAGGACACGCGCCTTGCA+TGG 0.487413 4:+53038731 MsG0480021077.01.T01:CDS
CTTGATCTTGCTGCTACTCA+TGG 0.489332 4:+53039284 MsG0480021077.01.T01:CDS
CCCTTGGAAATATTATGAAT+GGG 0.495769 4:+53048594 MsG0480021077.01.T01:CDS
CGGAAGTGCGGTAATCGAAC+GGG 0.496332 4:-53048913 None:intergenic
AGTTCTTGACCACCCTCGCC+AGG 0.497693 4:+53039583 MsG0480021077.01.T01:CDS
AATACAATCTAAGCATATGC+TGG 0.499516 4:-53049308 None:intergenic
TTTATCATATTATATGTGAT+GGG 0.500028 4:+53049091 MsG0480021077.01.T01:three_prime_UTR
TGTGATGGGGTACTTGGTCT+TGG 0.501140 4:+53049105 MsG0480021077.01.T01:three_prime_UTR
GCTTCTCAGCCTTGACAACC+GGG 0.508433 4:-53048961 None:intergenic
AAGGGATGATGCTGCAAGAT+GGG 0.510002 4:-53048576 None:intergenic
ACGCTGGCAGCAGTAACAAC+AGG 0.516439 4:-53048641 None:intergenic
GCTTTCGAGAAACAACTTAG+TGG 0.517123 4:+53039260 MsG0480021077.01.T01:CDS
CCCATTCATAATATTTCCAA+GGG 0.520390 4:-53048594 None:intergenic
AATGCAGCGTCGGCAAGATA+AGG 0.525457 4:+53039203 MsG0480021077.01.T01:CDS
GTGCAGGAAATTTGAAACAA+TGG 0.525517 4:+53048415 MsG0480021077.01.T01:intron
ACCCATTCATAATATTTCCA+AGG 0.526039 4:-53048595 None:intergenic
CATCATGTTTCAAGTTGTCG+TGG 0.530296 4:+53039117 MsG0480021077.01.T01:CDS
CAAGGGATGATGCTGCAAGA+TGG 0.532070 4:-53048577 None:intergenic
TAAAGCTAGCATGGATGACA+AGG 0.541549 4:+53039152 MsG0480021077.01.T01:CDS
AGCAACTGCAATAAGCGAGT+TGG 0.543723 4:+53048818 MsG0480021077.01.T01:CDS
AGCGATGTACAGCACAGAAA+AGG 0.543830 4:-53048871 None:intergenic
CAGGTTCCACAGAAATGGCT+GGG 0.544362 4:-53048712 None:intergenic
CATCTTGCAGCATCATCCCT+TGG 0.544464 4:+53048578 MsG0480021077.01.T01:CDS
CAAAGCAAACCCGGTTGTCA+AGG 0.546068 4:+53048952 MsG0480021077.01.T01:CDS
TTGCACATACCAATCTGAAA+CGG 0.546608 4:-53049257 None:intergenic
TGCCATAGCCAAAGCAAACC+CGG 0.547092 4:+53048943 MsG0480021077.01.T01:CDS
ATAAAGAACACCAATAAGAT+GGG 0.556225 4:-53049073 None:intergenic
TTTATTTGGCTCAGGTTCAG+AGG 0.556901 4:+53048754 MsG0480021077.01.T01:CDS
GGAGGACACGCGCCTTGCAT+GGG 0.557864 4:+53038732 MsG0480021077.01.T01:CDS
GCGGAAGTGCGGTAATCGAA+CGG 0.558885 4:-53048914 None:intergenic
TAAAAGGTATCGGTCGTCGA+AGG 0.559285 4:+53039238 MsG0480021077.01.T01:CDS
TAGGTTCCACGGAAATGGCT+GGG 0.559679 4:-53048670 None:intergenic
GCATCCTCATAAAGCTAGCA+TGG 0.570622 4:+53039143 MsG0480021077.01.T01:CDS
ATAAGATGGGCATGAAACTT+GGG 0.573785 4:-53049060 None:intergenic
ATGTTGAGGTTGCTTACGAG+TGG 0.579275 4:+53039058 MsG0480021077.01.T01:intron
ATTGAGCATAACATATCTAA+GGG 0.582391 4:-53049022 None:intergenic
GAATGTCAAGCTCCTCCTGA+AGG 0.582612 4:+53048452 MsG0480021077.01.T01:CDS
TTTGGCTATGGCATCTCGTG+CGG 0.585667 4:-53048933 None:intergenic
TTATCATATTATATGTGATG+GGG 0.586889 4:+53049092 MsG0480021077.01.T01:three_prime_UTR
ACATATGTCTCAACCTGGCG+AGG 0.587140 4:-53039596 None:intergenic
TGGCATCTCGTGCGGAAGTG+CGG 0.589332 4:-53048925 None:intergenic
AATGGCTGGGATATCGACAC+TGG 0.589398 4:-53048699 None:intergenic
ATGTCTCAACCTGGCGAGGG+TGG 0.593076 4:-53039592 None:intergenic
CATGATGCTGAAACAGGAGC+AGG 0.593551 4:+53048553 MsG0480021077.01.T01:CDS
ACAGGGTTTAATTGTCGATG+TGG 0.597602 4:+53048845 MsG0480021077.01.T01:CDS
CGAAGAAGACAATGCAGCGT+CGG 0.598414 4:+53039193 MsG0480021077.01.T01:CDS
AAGGAGAACCTAAAAGGTAT+CGG 0.604285 4:+53039228 MsG0480021077.01.T01:CDS
GCGTCGGCAAGATAAGGAGA+AGG 0.606627 4:+53039209 MsG0480021077.01.T01:CDS
GTTCCAAAATAGTTTCAACC+AGG 0.607197 4:-53039559 None:intergenic
ATGTCTCTTACGTAATCAAG+AGG 0.607551 4:-53039664 None:intergenic
AGGCGCGTGTCCTCCTTAGA+GGG 0.608353 4:-53038724 None:intergenic
CGATATCCCAGCCATTTCTG+TGG 0.616564 4:+53048706 MsG0480021077.01.T01:CDS
TTGCACGGAACAGCTTCAAG+AGG 0.633476 4:-53039467 None:intergenic
CATATGTCTCAACCTGGCGA+GGG 0.634298 4:-53039595 None:intergenic
GAGTGGTGATCTAAAACCGA+AGG 0.634494 4:+53048778 MsG0480021077.01.T01:CDS
GGATATCCCAGCCATTTCCG+TGG 0.638474 4:+53048664 MsG0480021077.01.T01:CDS
TTCCAAAATAGTTTCAACCA+GGG 0.645974 4:-53039558 None:intergenic
ATGTAGCAAAAGAAATTGTG+AGG 0.649064 4:+53039522 MsG0480021077.01.T01:CDS
ATAAGCGAGTTGGTTTGACA+GGG 0.651214 4:+53048828 MsG0480021077.01.T01:CDS
AATGGCTGGGATATCCACGC+TGG 0.652769 4:-53048657 None:intergenic
AAAGTATTACCTGACTTGCA+CGG 0.656453 4:-53039482 None:intergenic
CTGTACCCATAACCCATGCA+AGG 0.656953 4:-53038744 None:intergenic
GGTGATCTAAAACCGAAGGA+TGG 0.657693 4:+53048782 MsG0480021077.01.T01:CDS
GGCTCAGGTTCAGAGGAGAG+TGG 0.659270 4:+53048761 MsG0480021077.01.T01:CDS
AATGAACATATGTCTCAACC+TGG 0.667295 4:-53039601 None:intergenic
TGTTGTTACTGCTGCCAGCG+TGG 0.668169 4:+53048643 MsG0480021077.01.T01:CDS
ATATTGTGCATCAACAACTG+TGG 0.675543 4:+53048479 MsG0480021077.01.T01:CDS
AAAGCTAGCATGGATGACAA+GGG 0.705650 4:+53039153 MsG0480021077.01.T01:CDS
CACAATATAGGACCTTCAGG+AGG 0.720060 4:-53048464 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAGTATATATATAAAGTA+AGG + Chr4:53043628-53043647 MsG0480021077.01.T01:intron 10.0%
!! AATAGTATATATATAAAGTA+AGG - Chr4:53043647-53043628 None:intergenic 10.0%
!! AATAGTTTATATATAAAGTA+AGG - Chr4:53045258-53045277 None:intergenic 10.0%
!! AATTAAGTAATTAATTACTT+TGG - Chr4:53045804-53045823 None:intergenic 10.0%
!! ACTAAAAATTAAAGTAAAAT+TGG + Chr4:53045589-53045608 MsG0480021077.01.T01:intron 10.0%
!! ATTAATGATAATTTAATCTT+TGG + Chr4:53048385-53048404 MsG0480021077.01.T01:intron 10.0%
!! GATAAACTATAAAAAATTAA+AGG + Chr4:53045517-53045536 MsG0480021077.01.T01:intron 10.0%
!! GTATATATATATATAAAGTA+AGG - Chr4:53043354-53043373 None:intergenic 10.0%
!! TATAGTATATATATAAAGTA+AGG - Chr4:53043528-53043547 None:intergenic 10.0%
!! TATATATATACTATTGATAT+AGG + Chr4:53045453-53045472 MsG0480021077.01.T01:intron 10.0%
!! TTAAGTATTAACAAAAATAA+AGG + Chr4:53046063-53046082 MsG0480021077.01.T01:intron 10.0%
!! TTAATGATAATTTAATCTTT+GGG + Chr4:53048386-53048405 MsG0480021077.01.T01:intron 10.0%
!!! AAAATTAGTTTGAAAAAATT+TGG - Chr4:53046475-53046494 None:intergenic 10.0%
!!! AATTTTTTTTTTTTGCTTAA+AGG + Chr4:53046489-53046508 MsG0480021077.01.T01:intron 10.0%
!!! ACATTTAAAAATTTTGAAAA+AGG + Chr4:53046002-53046021 MsG0480021077.01.T01:intron 10.0%
!!! ATTTGATTTTTAGAATTTTT+TGG - Chr4:53042872-53042891 None:intergenic 10.0%
!!! TAAATTTGAAATCTTTTTTT+GGG + Chr4:53041132-53041151 MsG0480021077.01.T01:intron 10.0%
!!! TATTTGATTTTAGAATTTTT+TGG + Chr4:53044467-53044486 MsG0480021077.01.T01:intron 10.0%
!!! TATTTTATTTAACAAAAATC+GGG + Chr4:53044248-53044267 MsG0480021077.01.T01:intron 10.0%
!!! TATTTTATTTAACAAAAATC+GGG - Chr4:53044267-53044248 None:intergenic 10.0%
!!! TTAAATTTGAAATCTTTTTT+TGG + Chr4:53041131-53041150 MsG0480021077.01.T01:intron 10.0%
!! AACTTATTTAATATCTAACT+CGG - Chr4:53042370-53042389 None:intergenic 15.0%
!! AAGTAAAAAGAAAAAAGAAT+TGG + Chr4:53049412-53049431 MsG0480021077.01.T01:three_prime_UTR 15.0%
!! AATTCTTGAAGTAAAATAAA+AGG + Chr4:53041537-53041556 MsG0480021077.01.T01:intron 15.0%
!! ATAAATAAAATATGTAAGGT+CGG - Chr4:53045885-53045904 None:intergenic 15.0%
!! ATGCATAAATAAAATATGTA+AGG - Chr4:53045889-53045908 None:intergenic 15.0%
!! ATTATCATCATTAATTTCAA+GGG - Chr4:53039423-53039442 None:intergenic 15.0%
!! CTAAAATCAAATAAAACTAA+TGG - Chr4:53044460-53044479 None:intergenic 15.0%
!! GGAATTAAAATAGATAAAAA+GGG - Chr4:53039745-53039764 None:intergenic 15.0%
!! TATTATATTATTGATGGAAT+AGG + Chr4:53042148-53042167 MsG0480021077.01.T01:intron 15.0%
!! TGGAATTAAAATAGATAAAA+AGG - Chr4:53039746-53039765 None:intergenic 15.0%
!! TTAGTATATGTATTTACAAT+TGG + Chr4:53045769-53045788 MsG0480021077.01.T01:intron 15.0%
!! TTTATCATATTATATGTGAT+GGG + Chr4:53049091-53049110 MsG0480021077.01.T01:three_prime_UTR 15.0%
!!! AAAACTAATCGAAATTTTTT+CGG + Chr4:53042892-53042911 MsG0480021077.01.T01:intron 15.0%
!!! AAAACTAATGGAAATTTTTT+CGG - Chr4:53044448-53044467 None:intergenic 15.0%
!!! AATTCTTTTTTCTTTTTACT+TGG - Chr4:53049413-53049432 None:intergenic 15.0%
!!! AATTTGTTATTTGCAAAATA+TGG + Chr4:53045477-53045496 MsG0480021077.01.T01:intron 15.0%
!!! ACATTTTTAGAAATTTTACA+GGG + Chr4:53044691-53044710 MsG0480021077.01.T01:intron 15.0%
!!! GCATTTTTAAAAATTTTACA+GGG - Chr4:53042648-53042667 None:intergenic 15.0%
!!! GTTTTTTTGTTGTTTTTAAA+AGG - Chr4:53042793-53042812 None:intergenic 15.0%
!!! TAATTCTTTTTTTTTTTTGG+TGG + Chr4:53045842-53045861 MsG0480021077.01.T01:intron 15.0%
!!! TAGTAACAATTTTATCTATA+GGG + Chr4:53046033-53046052 MsG0480021077.01.T01:intron 15.0%
!!! TTAGTAACAATTTTATCTAT+AGG + Chr4:53046032-53046051 MsG0480021077.01.T01:intron 15.0%
!!! TTTTTATGATTTTATTTGAC+AGG + Chr4:53044504-53044523 MsG0480021077.01.T01:intron 15.0%
!!! TTTTTATGATTTTATTTGAC+AGG - Chr4:53044523-53044504 None:intergenic 15.0%
!!! TTTTTTTTTTTTAGCAAGAT+AGG + Chr4:53047391-53047410 MsG0480021077.01.T01:intron 15.0%
!! AAAAAAATTGAGAATGAATG+TGG + Chr4:53045210-53045229 MsG0480021077.01.T01:intron 20.0%
!! AAAAATATTGAGAATGAATG+TGG + Chr4:53043140-53043159 MsG0480021077.01.T01:intron 20.0%
!! AAAAATATTGAGAATGAATG+TGG - Chr4:53043159-53043140 None:intergenic 20.0%
!! AAAAATATTGAGAATGATTG+TGG + Chr4:53045044-53045063 MsG0480021077.01.T01:intron 20.0%
!! AACTTATTTAATATCTAACC+CGG + Chr4:53044969-53044988 MsG0480021077.01.T01:intron 20.0%
!! AAGCTTAATTATTGGTAAAT+AGG + Chr4:53046965-53046984 MsG0480021077.01.T01:intron 20.0%
!! AATTTCCAGTAAAAATGAAT+AGG + Chr4:53048212-53048231 MsG0480021077.01.T01:intron 20.0%
!! ACAAAAAAAAAAGAATGCAA+AGG + Chr4:53042280-53042299 MsG0480021077.01.T01:intron 20.0%
!! ACTTAATTTATTAACGAGTA+CGG + Chr4:53041701-53041720 MsG0480021077.01.T01:intron 20.0%
!! ACTTATTTAATATCTAACTC+GGG - Chr4:53042369-53042388 None:intergenic 20.0%
!! AGAAAATCAGAAAAAATTCA+AGG + Chr4:53044310-53044329 MsG0480021077.01.T01:intron 20.0%
!! AGAAAATCAGAAAAAATTCA+AGG - Chr4:53044329-53044310 None:intergenic 20.0%
!! AGAGAATATGAAATTTAACA+CGG + Chr4:53046093-53046112 MsG0480021077.01.T01:intron 20.0%
!! AGGAAAAATCAATATAAACT+AGG - Chr4:53038990-53039009 None:intergenic 20.0%
!! AGGTTCACTTAAATTAAATT+TGG + Chr4:53046842-53046861 MsG0480021077.01.T01:intron 20.0%
!! ATGAGATTATGAAATATGAA+TGG - Chr4:53041463-53041482 None:intergenic 20.0%
!! ATGTTAATTATGAGAATTTG+CGG + Chr4:53045725-53045744 MsG0480021077.01.T01:intron 20.0%
!! CAATTATGATTAATAATCGA+AGG - Chr4:53046356-53046375 None:intergenic 20.0%
!! CATTATCATCATTAATTTCA+AGG - Chr4:53039424-53039443 None:intergenic 20.0%
!! CTTTATCATATTATATGTGA+TGG + Chr4:53049090-53049109 MsG0480021077.01.T01:three_prime_UTR 20.0%
!! GATTATACATAAGAATTGTT+CGG - Chr4:53042730-53042749 None:intergenic 20.0%
!! TAAAGTAAAATTGGATAAGA+AGG + Chr4:53045598-53045617 MsG0480021077.01.T01:intron 20.0%
!! TAAATAAAATATGTAAGGTC+GGG - Chr4:53045884-53045903 None:intergenic 20.0%
!! TATCCAATTCTCTTAAATAT+TGG - Chr4:53042028-53042047 None:intergenic 20.0%
!! TCACTTAAATTAAATTTGGT+TGG + Chr4:53046846-53046865 MsG0480021077.01.T01:intron 20.0%
!! TTATCATATTATATGTGATG+GGG + Chr4:53049092-53049111 MsG0480021077.01.T01:three_prime_UTR 20.0%
!! TTATCATCATTAATTTCAAG+GGG - Chr4:53039422-53039441 None:intergenic 20.0%
!! TTATGTTTGCTTAAAATTGA+TGG + Chr4:53048144-53048163 MsG0480021077.01.T01:intron 20.0%
!! TTTAAGAGAATTGGATAATA+AGG + Chr4:53042031-53042050 MsG0480021077.01.T01:intron 20.0%
!! TTTCCAATATTTAAGAGAAT+TGG + Chr4:53042022-53042041 MsG0480021077.01.T01:intron 20.0%
!!! AAAATTTTTGAGAATGAATG+TGG - Chr4:53043857-53043876 None:intergenic 20.0%
!!! AAAGATCGCAATTTTTAATA+AGG + Chr4:53042118-53042137 MsG0480021077.01.T01:intron 20.0%
!!! AGCATTTTTTACTTAGTTTT+TGG + Chr4:53044532-53044551 MsG0480021077.01.T01:intron 20.0%
!!! AGTTACTTTTAATCATGATA+AGG + Chr4:53047072-53047091 MsG0480021077.01.T01:intron 20.0%
!!! AGTTTTTGGTTGTTTTTAAA+AGG + Chr4:53044546-53044565 MsG0480021077.01.T01:intron 20.0%
!!! ATTGGCTTTTTATATTAATG+TGG + Chr4:53049378-53049397 MsG0480021077.01.T01:three_prime_UTR 20.0%
!!! ATTTTGTATGATTTATGGTA+TGG - Chr4:53041495-53041514 None:intergenic 20.0%
!!! CTATTTCGGATTTTATAATA+CGG - Chr4:53044631-53044650 None:intergenic 20.0%
!!! GACATTTTTAGAAATTTTAC+AGG + Chr4:53044690-53044709 MsG0480021077.01.T01:intron 20.0%
!!! GGCATTTTTAAAAATTTTAC+AGG - Chr4:53042649-53042668 None:intergenic 20.0%
!!! TATCTATTTTAATTCCACAT+CGG + Chr4:53039749-53039768 MsG0480021077.01.T01:intron 20.0%
!!! TGAATCCAAATTTTAAAATC+CGG + Chr4:53044657-53044676 MsG0480021077.01.T01:intron 20.0%
!!! TGAATCCTAATTTTAAAATC+CGG - Chr4:53042682-53042701 None:intergenic 20.0%
!!! TGAATTTTTTCTGATTTTCT+GGG + Chr4:53043031-53043050 MsG0480021077.01.T01:intron 20.0%
!!! TGAATTTTTTCTGATTTTCT+GGG - Chr4:53043050-53043031 None:intergenic 20.0%
!!! TTAGGTTTTTAAATATGTAC+TGG + Chr4:53049197-53049216 MsG0480021077.01.T01:three_prime_UTR 20.0%
!!! TTGAATTTTTTCTGATTTTC+TGG + Chr4:53043030-53043049 MsG0480021077.01.T01:intron 20.0%
!!! TTGAATTTTTTCTGATTTTC+TGG - Chr4:53043049-53043030 None:intergenic 20.0%
!!! TTTCAATTGATTTTCAATTC+AGG + Chr4:53048281-53048300 MsG0480021077.01.T01:intron 20.0%
!!! TTTGCATTCTTTTTTTTTTG+TGG - Chr4:53042281-53042300 None:intergenic 20.0%
!!! TTTTACTTCAAGAATTTGTA+TGG - Chr4:53041533-53041552 None:intergenic 20.0%
!!! TTTTTAAATATGTACTGGTT+TGG + Chr4:53049202-53049221 MsG0480021077.01.T01:three_prime_UTR 20.0%
! AAAAAAAAAGAATGCAAAGG+AGG + Chr4:53042283-53042302 MsG0480021077.01.T01:intron 25.0%
! AAAAATACTGAGAATGAATG+TGG - Chr4:53043676-53043695 None:intergenic 25.0%
! AAAATAGATAAAAAGGGTTC+TGG - Chr4:53039739-53039758 None:intergenic 25.0%
! AAAATGACATGAATAAGAGA+TGG - Chr4:53048350-53048369 None:intergenic 25.0%
! AAATAAAATATGTAAGGTCG+GGG - Chr4:53045883-53045902 None:intergenic 25.0%
! AACCTTGAAATACTTGAAAA+AGG + Chr4:53039829-53039848 MsG0480021077.01.T01:intron 25.0%
! AAGCAAACATAAGAATACAA+TGG - Chr4:53048136-53048155 None:intergenic 25.0%
! AAGTAATAGTCCATGTTTAA+AGG + Chr4:53044739-53044758 MsG0480021077.01.T01:intron 25.0%
! AAGTAATAGTCCATGTTTAA+AGG - Chr4:53044758-53044739 None:intergenic 25.0%
! AATTGAGCATAACATATCTA+AGG - Chr4:53049026-53049045 None:intergenic 25.0%
! AATTTCATGAAATAATCGTC+AGG - Chr4:53039010-53039029 None:intergenic 25.0%
! ACGAGAATTGAAAATTGAAA+AGG - Chr4:53046311-53046330 None:intergenic 25.0%
! ACTTATTTAATATCTAACCC+GGG + Chr4:53044970-53044989 MsG0480021077.01.T01:intron 25.0%
! AGAATTGAAAATTGAAAAGG+GGG - Chr4:53046308-53046327 None:intergenic 25.0%
! AGTAAAAATGAATAGGAGTT+GGG + Chr4:53048219-53048238 MsG0480021077.01.T01:intron 25.0%
! ATAAAGAACACCAATAAGAT+GGG - Chr4:53049076-53049095 None:intergenic 25.0%
! ATTGAGCATAACATATCTAA+GGG - Chr4:53049025-53049044 None:intergenic 25.0%
! ATTGGTGAAAATATGTATCT+TGG + Chr4:53049165-53049184 MsG0480021077.01.T01:three_prime_UTR 25.0%
! CATAACTAATATCACCAATT+TGG + Chr4:53047479-53047498 MsG0480021077.01.T01:intron 25.0%
! CCATAAATCATACAAAATTC+AGG + Chr4:53041497-53041516 MsG0480021077.01.T01:intron 25.0%
! CGAGAATTGAAAATTGAAAA+GGG - Chr4:53046310-53046329 None:intergenic 25.0%
! GAAACATTAAAGGAATAAGA+AGG + Chr4:53045551-53045570 MsG0480021077.01.T01:intron 25.0%
! GAATCAAGAAGAAACATTAA+AGG + Chr4:53045541-53045560 MsG0480021077.01.T01:intron 25.0%
! GACTCATTTCAATAAGTAAT+TGG - Chr4:53047165-53047184 None:intergenic 25.0%
! GAGAATATGAAATTTAACAC+GGG + Chr4:53046094-53046113 MsG0480021077.01.T01:intron 25.0%
! GAGAATTGAAAATTGAAAAG+GGG - Chr4:53046309-53046328 None:intergenic 25.0%
! GCTTAGATTGTATTTATTGT+GGG + Chr4:53049317-53049336 MsG0480021077.01.T01:three_prime_UTR 25.0%
! TAATGTGCATAACAAACAAT+AGG + Chr4:53039439-53039458 MsG0480021077.01.T01:intron 25.0%
! TAGAAACAATGCATGATATA+TGG + Chr4:53042231-53042250 MsG0480021077.01.T01:intron 25.0%
! TCATGAAATTATCGTAGAAA+GGG + Chr4:53039020-53039039 MsG0480021077.01.T01:intron 25.0%
! TCATTCTGCAATATCTTATT+GGG + Chr4:53047665-53047684 MsG0480021077.01.T01:intron 25.0%
! TGCTTAGATTGTATTTATTG+TGG + Chr4:53049316-53049335 MsG0480021077.01.T01:three_prime_UTR 25.0%
! TGGATTCATGTTTACTATTT+CGG - Chr4:53044645-53044664 None:intergenic 25.0%
! TGTTAATTATGAGAATTTGC+GGG + Chr4:53045726-53045745 MsG0480021077.01.T01:intron 25.0%
! TTCATGAAATTATCGTAGAA+AGG + Chr4:53039019-53039038 MsG0480021077.01.T01:intron 25.0%
! TTGAATATAAAGAGCCAAAT+TGG - Chr4:53047496-53047515 None:intergenic 25.0%
! TTGGTTCAAAAAAAAATTCC+AGG - Chr4:53046456-53046475 None:intergenic 25.0%
!! AACTTTGTTTGAAATTGTTG+GGG + Chr4:53038897-53038916 MsG0480021077.01.T01:intron 25.0%
!! AGAACTTTGTTTGAAATTGT+TGG + Chr4:53038895-53038914 MsG0480021077.01.T01:intron 25.0%
!! ATATGATTTGTATTAAGCTG+AGG - Chr4:53046927-53046946 None:intergenic 25.0%
!! ATGAAATTTTGGATTTTGAG+GGG + Chr4:53042966-53042985 MsG0480021077.01.T01:intron 25.0%
!! ATTTATTGTGGGTTTTCTAA+TGG + Chr4:53049328-53049347 MsG0480021077.01.T01:three_prime_UTR 25.0%
!! ATTTGTATTTCTGTGATAAC+TGG + Chr4:53047760-53047779 MsG0480021077.01.T01:intron 25.0%
!! CCTGAATTTTGTATGATTTA+TGG - Chr4:53041500-53041519 None:intergenic 25.0%
!! GAACTTTGTTTGAAATTGTT+GGG + Chr4:53038896-53038915 MsG0480021077.01.T01:intron 25.0%
!! GATAACACTTTGTTTAGAAA+CGG - Chr4:53040533-53040552 None:intergenic 25.0%
!! GATGAAATTTTGGATTTTGA+GGG + Chr4:53042965-53042984 MsG0480021077.01.T01:intron 25.0%
!! GATTATAGTTTGTAATCGAT+TGG + Chr4:53049360-53049379 MsG0480021077.01.T01:three_prime_UTR 25.0%
!! GTAAAAGGTCCTTTTAAATA+CGG + Chr4:53046182-53046201 MsG0480021077.01.T01:intron 25.0%
!! GTTTTCCATTCAATTTGTAT+GGG - Chr4:53040813-53040832 None:intergenic 25.0%
!! TCAACATTTTCTTTGTAGAT+GGG + Chr4:53047351-53047370 MsG0480021077.01.T01:intron 25.0%
!! TTCAACATTTTCTTTGTAGA+TGG + Chr4:53047350-53047369 MsG0480021077.01.T01:intron 25.0%
!! TTGTGATTTTCGATTCTTAA+TGG + Chr4:53046525-53046544 MsG0480021077.01.T01:intron 25.0%
!! TTTAACAAAAATCGGGTTTT+CGG + Chr4:53044255-53044274 MsG0480021077.01.T01:intron 25.0%
!! TTTGCTTAAAATTGATGGTT+TGG + Chr4:53048149-53048168 MsG0480021077.01.T01:intron 25.0%
!! TTTGTATTTCTGTGATAACT+GGG + Chr4:53047761-53047780 MsG0480021077.01.T01:intron 25.0%
!! TTTTAATCATGATAAGGTTG+TGG + Chr4:53047078-53047097 MsG0480021077.01.T01:intron 25.0%
!!! ATCTCTAAGCCTTTTTTATT+TGG + Chr4:53048740-53048759 MsG0480021077.01.T01:CDS 25.0%
!!! ATTTGAAATCTTTTTTTGGG+TGG + Chr4:53041135-53041154 MsG0480021077.01.T01:intron 25.0%
!!! ATTTGGTTGGTAAATTATGT+CGG + Chr4:53046859-53046878 MsG0480021077.01.T01:intron 25.0%
!!! CTGTTATTTTGATACAATTC+TGG + Chr4:53047262-53047281 MsG0480021077.01.T01:intron 25.0%
!!! GAATTTTTTCTGATTTTCTG+GGG + Chr4:53043032-53043051 MsG0480021077.01.T01:intron 25.0%
!!! GAATTTTTTCTGATTTTCTG+GGG - Chr4:53043051-53043032 None:intergenic 25.0%
!!! TAATTGCTGTTGAATGTTTT+TGG + Chr4:53046776-53046795 MsG0480021077.01.T01:intron 25.0%
!!! TACACTTTTTATTCTTGCAT+TGG + Chr4:53044806-53044825 MsG0480021077.01.T01:intron 25.0%
!!! TACACTTTTTTTTCTTGCAT+TGG - Chr4:53042533-53042552 None:intergenic 25.0%
!!! TCAAATACTTTTTTACGTGT+AGG + Chr4:53047428-53047447 MsG0480021077.01.T01:intron 25.0%
!!! TTAAAATTGATGGTTTGGTT+GGG + Chr4:53048154-53048173 MsG0480021077.01.T01:intron 25.0%
!!! TTCCTTTTTCAAGTATTTCA+AGG - Chr4:53039834-53039853 None:intergenic 25.0%
!!! TTCTTTTTTTTTTTTGGTGG+TGG + Chr4:53045845-53045864 MsG0480021077.01.T01:intron 25.0%
!!! TTGTTCTGAAGCTTAATTAT+TGG + Chr4:53046957-53046976 MsG0480021077.01.T01:intron 25.0%
!!! TTTTGGGACTTTATTTTGAT+TGG + Chr4:53049147-53049166 MsG0480021077.01.T01:three_prime_UTR 25.0%
AAACTCTTAACCAAAAGAGA+AGG + Chr4:53047301-53047320 MsG0480021077.01.T01:intron 30.0%
AAAGAAAAAAGAATTGGAGC+TGG + Chr4:53049418-53049437 MsG0480021077.01.T01:three_prime_UTR 30.0%
AACTCTTAACCAAAAGAGAA+GGG + Chr4:53047302-53047321 MsG0480021077.01.T01:intron 30.0%
AAGCAACCTCAACATTAAAA+GGG - Chr4:53039053-53039072 None:intergenic 30.0%
AATACAATCTAAGCATATGC+TGG - Chr4:53049311-53049330 None:intergenic 30.0%
AATAGTTAAATGGGTATCCA+CGG - Chr4:53041806-53041825 None:intergenic 30.0%
ACATGTGCAAATATGGTTTA+TGG + Chr4:53038846-53038865 MsG0480021077.01.T01:intron 30.0%
ACATTATCAACATTAAGTCC+AGG - Chr4:53039335-53039354 None:intergenic 30.0%
ACCCATTCATAATATTTCCA+AGG - Chr4:53048598-53048617 None:intergenic 30.0%
ATAGACCCATACAAATTGAA+TGG + Chr4:53040805-53040824 MsG0480021077.01.T01:intron 30.0%
ATCAATTCAGGATTCATGAT+CGG + Chr4:53046389-53046408 MsG0480021077.01.T01:intron 30.0%
ATGAAAAATGGGTCTAAACA+TGG - Chr4:53044394-53044413 None:intergenic 30.0%
ATGTAGCAAAAGAAATTGTG+AGG + Chr4:53039522-53039541 MsG0480021077.01.T01:CDS 30.0%
ATTAGTCATAACTAAGACAC+TGG - Chr4:53048076-53048095 None:intergenic 30.0%
CAAAAAGACTATAAGTTGCA+TGG - Chr4:53047645-53047664 None:intergenic 30.0%
CAATAATGAATTAGTCCAAG+TGG + Chr4:53042560-53042579 MsG0480021077.01.T01:intron 30.0%
CAATAATGAATTAGTCCAAG+TGG - Chr4:53042579-53042560 None:intergenic 30.0%
CAGTAAAAATGAATAGGAGT+TGG + Chr4:53048218-53048237 MsG0480021077.01.T01:intron 30.0%
CCCATTCATAATATTTCCAA+GGG - Chr4:53048597-53048616 None:intergenic 30.0%
CCCTTGGAAATATTATGAAT+GGG + Chr4:53048594-53048613 MsG0480021077.01.T01:CDS 30.0%
CTATCTAACCAATATTCCTA+GGG - Chr4:53038877-53038896 None:intergenic 30.0%
GATAAAGAACACCAATAAGA+TGG - Chr4:53049077-53049096 None:intergenic 30.0%
GGAAAAAGAGCAATGTATTA+TGG - Chr4:53042007-53042026 None:intergenic 30.0%
GGTATCATATTTATCCAACA+GGG - Chr4:53041260-53041279 None:intergenic 30.0%
GTCATTCTGCAATATCTTAT+TGG + Chr4:53047664-53047683 MsG0480021077.01.T01:intron 30.0%
TAACTGTGTATTACTAGAGA+AGG + Chr4:53047108-53047127 MsG0480021077.01.T01:intron 30.0%
TAAGCAACCTCAACATTAAA+AGG - Chr4:53039054-53039073 None:intergenic 30.0%
TAATTTAATCTTTGGGTCCT+TGG + Chr4:53048393-53048412 MsG0480021077.01.T01:intron 30.0%
TATCCATGTGTATAAGAGTT+TGG - Chr4:53041669-53041688 None:intergenic 30.0%
TCCCTTGGAAATATTATGAA+TGG + Chr4:53048593-53048612 MsG0480021077.01.T01:CDS 30.0%
TCTATCTAACCAATATTCCT+AGG - Chr4:53038878-53038897 None:intergenic 30.0%
TGAATGGAACATGTTATGTA+TGG - Chr4:53041447-53041466 None:intergenic 30.0%
TGGGTGCTTAATTGAAAATA+AGG + Chr4:53047684-53047703 MsG0480021077.01.T01:intron 30.0%
TGTAAAGTCCCCTTATATAT+AGG - Chr4:53040937-53040956 None:intergenic 30.0%
TGTGTGTGTGTATACATATA+GGG + Chr4:53041599-53041618 MsG0480021077.01.T01:intron 30.0%
TTAGTCATAACTAAGACACT+GGG - Chr4:53048075-53048094 None:intergenic 30.0%
TTCCAAAATAGTTTCAACCA+GGG - Chr4:53039561-53039580 None:intergenic 30.0%
TTCTTATCAAACACACATGA+TGG - Chr4:53047535-53047554 None:intergenic 30.0%
TTTAACAAAAATCGGGTTTC+CGG - Chr4:53043086-53043105 None:intergenic 30.0%
! AAAAAGGAACTTCTAGAAAC+AGG + Chr4:53039845-53039864 MsG0480021077.01.T01:intron 30.0%
! AATTTAGAGAGCATGAATGA+GGG - Chr4:53040995-53041014 None:intergenic 30.0%
! ACATGGAATTTTGGATTTTG+AGG - Chr4:53044377-53044396 None:intergenic 30.0%
! ATAGGGAAATATCTGCATTT+TGG + Chr4:53049130-53049149 MsG0480021077.01.T01:three_prime_UTR 30.0%
! ATATCTTTTCCGTTTCAGAT+TGG + Chr4:53049248-53049267 MsG0480021077.01.T01:three_prime_UTR 30.0%
! ATCAACAACTGTGGATTTTT+CGG + Chr4:53048488-53048507 MsG0480021077.01.T01:CDS 30.0%
! ATGATTCCCTTTTAATGTTG+AGG + Chr4:53039044-53039063 MsG0480021077.01.T01:intron 30.0%
! ATGGAATTTTGGATTTTGAG+GGG - Chr4:53044375-53044394 None:intergenic 30.0%
! ATTGAACATCATGGGAATTT+TGG - Chr4:53047900-53047919 None:intergenic 30.0%
! CAACATTTTCTTTGTAGATG+GGG + Chr4:53047352-53047371 MsG0480021077.01.T01:intron 30.0%
! CATAAACTAGTTTAGATACC+CGG - Chr4:53045001-53045020 None:intergenic 30.0%
! CATGGAATTTTGGATTTTGA+GGG - Chr4:53044376-53044395 None:intergenic 30.0%
! CGATGAAATTTTGGATTTTG+AGG + Chr4:53042964-53042983 MsG0480021077.01.T01:intron 30.0%
! CGTTTTCCATTCAATTTGTA+TGG - Chr4:53040814-53040833 None:intergenic 30.0%
! TAATTTAGAGAGCATGAATG+AGG - Chr4:53040996-53041015 None:intergenic 30.0%
! TAGGGAAATATCTGCATTTT+GGG + Chr4:53049131-53049150 MsG0480021077.01.T01:three_prime_UTR 30.0%
! TGAATTTTCATTTCCCTCTA+AGG + Chr4:53038711-53038730 MsG0480021077.01.T01:CDS 30.0%
! TTAACAAAAATCGGGTTTTC+GGG + Chr4:53044256-53044275 MsG0480021077.01.T01:intron 30.0%
! TTGGTGTCTAAAAAAAAACC+TGG - Chr4:53041650-53041669 None:intergenic 30.0%
! TTTAAAAATTTTACAGGGCG+CGG - Chr4:53042643-53042662 None:intergenic 30.0%
! TTTAACTACCCGTTACTTTA+TGG - Chr4:53041767-53041786 None:intergenic 30.0%
! TTTCTGAGTGAGAGTATAAA+AGG - Chr4:53039939-53039958 None:intergenic 30.0%
! TTTTCCTTCTCTCTCTAAAT+TGG - Chr4:53040316-53040335 None:intergenic 30.0%
!! AATTGTTGCTTCGTTTTAAG+TGG - Chr4:53040007-53040026 None:intergenic 30.0%
!! AGTGAGAGTATAAAAGGTTT+TGG - Chr4:53039933-53039952 None:intergenic 30.0%
!! CAACTCCTATTCATTTTTAC+TGG - Chr4:53048220-53048239 None:intergenic 30.0%
!! CTTAAAATTGATGGTTTGGT+TGG + Chr4:53048153-53048172 MsG0480021077.01.T01:intron 30.0%
!! TAAGTTGGTATGGACAATTA+GGG - Chr4:53041890-53041909 None:intergenic 30.0%
!! TTAAATATGTACTGGTTTGG+TGG + Chr4:53049205-53049224 MsG0480021077.01.T01:three_prime_UTR 30.0%
!! TTTGGTTGGTAAATTATGTC+GGG + Chr4:53046860-53046879 MsG0480021077.01.T01:intron 30.0%
!! TTTTTAGCAAGATAGGATAG+TGG + Chr4:53047398-53047417 MsG0480021077.01.T01:intron 30.0%
!!! ATACTTTTTTACGTGTAGGT+AGG + Chr4:53047432-53047451 MsG0480021077.01.T01:intron 30.0%
!!! GCATTCCGGATTTTAAAATT+AGG + Chr4:53042674-53042693 MsG0480021077.01.T01:intron 30.0%
!!! GCATTCCGGATTTTAAAATT+TGG - Chr4:53042693-53042674 None:intergenic 30.0%
!!! GCATTCTTTTTTTTTTGTGG+TGG - Chr4:53042278-53042297 None:intergenic 30.0%
!!! GTTGTGTCTTGTTTTTTGAT+TGG + Chr4:53046572-53046591 MsG0480021077.01.T01:intron 30.0%
!!! TCTTTTTTTTTTGTGGTGGT+CGG - Chr4:53042274-53042293 None:intergenic 30.0%
AAAAATGTCCTTGTGCATTC+CGG - Chr4:53044679-53044698 None:intergenic 35.0%
AAACGTCGAGATTGAATCTA+CGG + Chr4:53040080-53040099 MsG0480021077.01.T01:intron 35.0%
AAACTGTAGCTTCTCGAAAT+CGG - Chr4:53040498-53040517 None:intergenic 35.0%
AAAGGCTTAGAGATAGTTTC+AGG - Chr4:53048734-53048753 None:intergenic 35.0%
AAGTTTCATGCCCATCTTAT+TGG + Chr4:53049063-53049082 MsG0480021077.01.T01:three_prime_UTR 35.0%
AATAAGATGGGCATGAAACT+TGG - Chr4:53049064-53049083 None:intergenic 35.0%
AATCGTTGAGCGAGAATTAT+GGG - Chr4:53040849-53040868 None:intergenic 35.0%
AATGAACATATGTCTCAACC+TGG - Chr4:53039604-53039623 None:intergenic 35.0%
ACAAGCCCAATTATGCATTT+CGG + Chr4:53040721-53040740 MsG0480021077.01.T01:intron 35.0%
ACAATTAAGCACGGAAATAC+TGG - Chr4:53047717-53047736 None:intergenic 35.0%
ACACCAAACTCTTATACACA+TGG + Chr4:53041663-53041682 MsG0480021077.01.T01:intron 35.0%
ACGATGTGGGAAGTTATTAT+TGG - Chr4:53046123-53046142 None:intergenic 35.0%
AGAAATTGTGAGGCCAAAAA+AGG + Chr4:53039532-53039551 MsG0480021077.01.T01:CDS 35.0%
AGAGGACATGCATTTAAACA+AGG - Chr4:53047582-53047601 None:intergenic 35.0%
ATAAGATGGGCATGAAACTT+GGG - Chr4:53049063-53049082 None:intergenic 35.0%
ATAGTTAAATGGGTATCCAC+GGG - Chr4:53041805-53041824 None:intergenic 35.0%
ATATTGTGCATCAACAACTG+TGG + Chr4:53048479-53048498 MsG0480021077.01.T01:CDS 35.0%
ATCATATTTATCCAACAGGG+CGG - Chr4:53041257-53041276 None:intergenic 35.0%
ATCCTGAATTGATTGAACGA+AGG - Chr4:53046382-53046401 None:intergenic 35.0%
ATGCACGTCACCTATATATA+AGG + Chr4:53040924-53040943 MsG0480021077.01.T01:intron 35.0%
ATGTCTCTTACGTAATCAAG+AGG - Chr4:53039667-53039686 None:intergenic 35.0%
ATGTGTGTTTGATAAGAAGC+AGG + Chr4:53047537-53047556 MsG0480021077.01.T01:intron 35.0%
ATTGTCCATAGAGATGTCAA+TGG + Chr4:53041197-53041216 MsG0480021077.01.T01:intron 35.0%
ATTTCATCACCTCTTATCCT+TGG - Chr4:53039788-53039807 None:intergenic 35.0%
CAAACCAATTTAGAGAGAGA+AGG + Chr4:53040309-53040328 MsG0480021077.01.T01:intron 35.0%
CAAGTATTTCAAGGTTTCAC+CGG - Chr4:53039825-53039844 None:intergenic 35.0%
CAATTAAGCACGGAAATACT+GGG - Chr4:53047716-53047735 None:intergenic 35.0%
CAATTGTAACCAAGGATAAG+AGG + Chr4:53039776-53039795 MsG0480021077.01.T01:intron 35.0%
CAATTTGTATGGGTCTATTG+AGG - Chr4:53040803-53040822 None:intergenic 35.0%
CACGGAACGAATAGTTAAAT+GGG - Chr4:53041815-53041834 None:intergenic 35.0%
CACTCACATTAAATGTTGAG+AGG + Chr4:53040238-53040257 MsG0480021077.01.T01:intron 35.0%
CAGTTGTTGATGCACAATAT+AGG - Chr4:53048479-53048498 None:intergenic 35.0%
CATTTAATGTGAGTGTCTCA+AGG - Chr4:53040233-53040252 None:intergenic 35.0%
CGATGTGGGAAGTTATTATT+GGG - Chr4:53046122-53046141 None:intergenic 35.0%
CTCTTATCCTTGGTTACAAT+TGG - Chr4:53039778-53039797 None:intergenic 35.0%
GAAATTGAAGTGAGAAACTC+CGG + Chr4:53039803-53039822 MsG0480021077.01.T01:intron 35.0%
GAACCTGAGCCAAATAAAAA+AGG - Chr4:53048752-53048771 None:intergenic 35.0%
GAATGATTTCGTACCTTTGT+GGG - Chr4:53040963-53040982 None:intergenic 35.0%
GACAATCACACAATTAAGCA+CGG - Chr4:53047726-53047745 None:intergenic 35.0%
GACAATGCATCATATATGCA+AGG - Chr4:53041183-53041202 None:intergenic 35.0%
GATTTCGTTGAAATTTGCAG+TGG + Chr4:53046719-53046738 MsG0480021077.01.T01:intron 35.0%
GCTTGATAAGATGTGAGAAT+TGG + Chr4:53048982-53049001 MsG0480021077.01.T01:exon 35.0%
GGGTATCATATTTATCCAAC+AGG - Chr4:53041261-53041280 None:intergenic 35.0%
GGTGATAGATTGAACATCAT+GGG - Chr4:53047908-53047927 None:intergenic 35.0%
GGTGATAGATTGAATATCAC+AGG - Chr4:53047845-53047864 None:intergenic 35.0%
GTATCCACGGGTATAATAAA+CGG - Chr4:53041793-53041812 None:intergenic 35.0%
GTCAGTGTTCCGTATTTAAA+AGG - Chr4:53046194-53046213 None:intergenic 35.0%
GTGTATACATATAGGGTTTG+CGG + Chr4:53041606-53041625 MsG0480021077.01.T01:intron 35.0%
GTGTGTGTGTGTATACATAT+AGG + Chr4:53041598-53041617 MsG0480021077.01.T01:intron 35.0%
GTTCCAAAATAGTTTCAACC+AGG - Chr4:53039562-53039581 None:intergenic 35.0%
TAACTAACCCTAGAGGATTT+GGG - Chr4:53046274-53046293 None:intergenic 35.0%
TAATCGTTGAGCGAGAATTA+TGG - Chr4:53040850-53040869 None:intergenic 35.0%
TAGTCATAACTAAGACACTG+GGG - Chr4:53048074-53048093 None:intergenic 35.0%
TATCCACGGGTATAATAAAC+GGG - Chr4:53041792-53041811 None:intergenic 35.0%
TGAATGATTTCGTACCTTTG+TGG - Chr4:53040964-53040983 None:intergenic 35.0%
TGACATGAATAAGAGATGGA+AGG - Chr4:53048346-53048365 None:intergenic 35.0%
TGAGACTTACACAAGAAAGA+GGG - Chr4:53047866-53047885 None:intergenic 35.0%
TGCACGTCACCTATATATAA+GGG + Chr4:53040925-53040944 MsG0480021077.01.T01:intron 35.0%
TGGGATTTACAAAAGACACA+GGG - Chr4:53047929-53047948 None:intergenic 35.0%
TGTGTGTTTGATAAGAAGCA+GGG + Chr4:53047538-53047557 MsG0480021077.01.T01:intron 35.0%
TTAAAATCCGGAATGCACAA+GGG - Chr4:53044688-53044669 None:intergenic 35.0%
TTAACAAAAATCGGGTTTCC+GGG - Chr4:53043085-53043104 None:intergenic 35.0%
TTACTGAATTGAGACGATGT+GGG - Chr4:53046136-53046155 None:intergenic 35.0%
TTCCTTCGTTCAATCAATTC+AGG + Chr4:53046377-53046396 MsG0480021077.01.T01:intron 35.0%
TTGAGACTTACACAAGAAAG+AGG - Chr4:53047867-53047886 None:intergenic 35.0%
TTGCACATACCAATCTGAAA+CGG - Chr4:53049260-53049279 None:intergenic 35.0%
TTGGGATTTACAAAAGACAC+AGG - Chr4:53047930-53047949 None:intergenic 35.0%
TTGTCCATAGAGATGTCAAT+GGG + Chr4:53041198-53041217 MsG0480021077.01.T01:intron 35.0%
TTTACTGAATTGAGACGATG+TGG - Chr4:53046137-53046156 None:intergenic 35.0%
! AAAGTATTACCTGACTTGCA+CGG - Chr4:53039485-53039504 None:intergenic 35.0%
! AAGGAGAACCTAAAAGGTAT+CGG + Chr4:53039228-53039247 MsG0480021077.01.T01:CDS 35.0%
! AGTCCAAGTGGTAATAGTTT+TGG + Chr4:53042572-53042591 MsG0480021077.01.T01:intron 35.0%
! AGTCCAAGTGGTAATAGTTT+TGG - Chr4:53042591-53042572 None:intergenic 35.0%
! ATATCGACACTGGAAGTTTT+AGG - Chr4:53048692-53048711 None:intergenic 35.0%
! ATGTGGTTCTATTGCATGTT+TGG + Chr4:53046810-53046829 MsG0480021077.01.T01:intron 35.0%
! ATTATATGTGATGGGGTACT+TGG + Chr4:53049099-53049118 MsG0480021077.01.T01:three_prime_UTR 35.0%
! CGAATTTTTGTTCTCGTTGT+CGG + Chr4:53039085-53039104 MsG0480021077.01.T01:CDS 35.0%
! CTACATTTTGTAAAGCGAGA+TGG - Chr4:53039508-53039527 None:intergenic 35.0%
! CTATCATTACCCTTCTCTTT+TGG - Chr4:53047314-53047333 None:intergenic 35.0%
! CTGTTTGTTAGAGAAACACT+CGG - Chr4:53040371-53040390 None:intergenic 35.0%
! GAAAAACTAGTTTAGAGACC+CGG + Chr4:53042338-53042357 MsG0480021077.01.T01:intron 35.0%
! GGGTCTAAACGATGAAATTT+TGG + Chr4:53042955-53042974 MsG0480021077.01.T01:intron 35.0%
! GTCCAAGTGGTAATAGTTTT+GGG + Chr4:53042573-53042592 MsG0480021077.01.T01:intron 35.0%
! GTCCAAGTGGTAATAGTTTT+GGG - Chr4:53042592-53042573 None:intergenic 35.0%
! GTGCAGGAAATTTGAAACAA+TGG + Chr4:53048415-53048434 MsG0480021077.01.T01:intron 35.0%
! TGGATTCTGTTTTCTCTTTG+TGG + Chr4:53048037-53048056 MsG0480021077.01.T01:intron 35.0%
! TGGGTCTAAACATGGAATTT+TGG - Chr4:53044386-53044405 None:intergenic 35.0%
! TGTTTGTTAGAGAAACACTC+GGG - Chr4:53040370-53040389 None:intergenic 35.0%
! TTAAAAATTTTACAGGGCGC+GGG - Chr4:53042642-53042661 None:intergenic 35.0%
! TTAATCTTTTGCTCGATCCA+GGG - Chr4:53040674-53040693 None:intergenic 35.0%
! TTGTTGGTTGTAGATTGGTA+GGG - Chr4:53041051-53041070 None:intergenic 35.0%
! TTTAAAATCCGGAATGCACA+AGG + Chr4:53044668-53044687 MsG0480021077.01.T01:intron 35.0%
! TTTAAAATCCGGAATGCACA+AGG - Chr4:53044687-53044668 None:intergenic 35.0%
! TTTGAGACATGAGTAAAACC+AGG + Chr4:53041629-53041648 MsG0480021077.01.T01:intron 35.0%
! TTTGTTGGTTGTAGATTGGT+AGG - Chr4:53041052-53041071 None:intergenic 35.0%
! TTTTCTTTGTAGATGGGGAT+AGG + Chr4:53047357-53047376 MsG0480021077.01.T01:intron 35.0%
!! AAATCCTCTAGGGTTAGTTA+GGG + Chr4:53046274-53046293 MsG0480021077.01.T01:intron 35.0%
!! AAATTTTGGATTTTGAGGGG+CGG + Chr4:53042969-53042988 MsG0480021077.01.T01:intron 35.0%
!! AAGTTGGTATGGACAATTAG+GGG - Chr4:53041889-53041908 None:intergenic 35.0%
!! ATGCATAATTGGGCTTGTTT+TGG - Chr4:53040719-53040738 None:intergenic 35.0%
!! ATTTTCATTTCCCTCTAAGG+AGG + Chr4:53038714-53038733 MsG0480021077.01.T01:CDS 35.0%
!! CTAAGTTGGTATGGACAATT+AGG - Chr4:53041891-53041910 None:intergenic 35.0%
!! CTCTCTCTAAATTGGTTTGT+CGG - Chr4:53040308-53040327 None:intergenic 35.0%
!! TGCTTCGTTTTAAGTGGAAA+GGG - Chr4:53040001-53040020 None:intergenic 35.0%
!! TTGCTTCGTTTTAAGTGGAA+AGG - Chr4:53040002-53040021 None:intergenic 35.0%
!!! AAGCCTTTTTTATTTGGCTC+AGG + Chr4:53048746-53048765 MsG0480021077.01.T01:CDS 35.0%
!!! AATTGGGCTTGTTTTGGTTT+GGG - Chr4:53040713-53040732 None:intergenic 35.0%
!!! AGTTTTGGGTCCTTTAAACA+TGG + Chr4:53042587-53042606 MsG0480021077.01.T01:intron 35.0%
!!! AGTTTTGGGTCCTTTAAACA+TGG - Chr4:53042606-53042587 None:intergenic 35.0%
!!! ATATGGAGAGCTAGTTTTGA+AGG + Chr4:53045494-53045513 MsG0480021077.01.T01:intron 35.0%
!!! GAATGTTTTTGGTGGTTTGT+TGG + Chr4:53046787-53046806 MsG0480021077.01.T01:intron 35.0%
!!! GTTTGGTGTTATTGCTTTTG+CGG + Chr4:53046753-53046772 MsG0480021077.01.T01:CDS 35.0%
!!! TAATTGGGCTTGTTTTGGTT+TGG - Chr4:53040714-53040733 None:intergenic 35.0%
!!! TATGGAGAGCTAGTTTTGAA+GGG + Chr4:53045495-53045514 MsG0480021077.01.T01:intron 35.0%
!!! TGAAATCTTTTTTTGGGTGG+TGG + Chr4:53041138-53041157 MsG0480021077.01.T01:intron 35.0%
!!! TTGCTGTTGAATGTTTTTGG+TGG + Chr4:53046779-53046798 MsG0480021077.01.T01:intron 35.0%
!!! TTTTTTTTTTGGTGGTGGCT+GGG + Chr4:53045850-53045869 MsG0480021077.01.T01:intron 35.0%
!!! TTTTTTTTTTTGGTGGTGGC+TGG + Chr4:53045849-53045868 MsG0480021077.01.T01:intron 35.0%
AAAAATGCCCTTGTGCATTC+CGG + Chr4:53042660-53042679 MsG0480021077.01.T01:intron 40.0%
AAACGCGAGCTTAACTAAGT+TGG - Chr4:53041905-53041924 None:intergenic 40.0%
AAAGCTAGCATGGATGACAA+GGG + Chr4:53039153-53039172 MsG0480021077.01.T01:CDS 40.0%
AAAGGTAGAGAGAGAGAGAT+GGG - Chr4:53046230-53046249 None:intergenic 40.0%
AACTCTGTAACAACCACTCA+AGG + Chr4:53040125-53040144 MsG0480021077.01.T01:intron 40.0%
AAGACACTGGGGAAGATAAA+GGG - Chr4:53048063-53048082 None:intergenic 40.0%
AAGAGAAAAAACGACCACAC+GGG - Chr4:53046660-53046679 None:intergenic 40.0%
AAGGAGAAGGAGAACCTAAA+AGG + Chr4:53039222-53039241 MsG0480021077.01.T01:CDS 40.0%
AAGGAGGAGAGAGAAATCAA+AGG - Chr4:53046248-53046267 None:intergenic 40.0%
AAGGATGAGACTGAGACTAA+CGG - Chr4:53040214-53040233 None:intergenic 40.0%
AATTATGAGCGGCGTACTTA+TGG - Chr4:53038923-53038942 None:intergenic 40.0%
AATTCAACAACACGAGACCA+CGG - Chr4:53046693-53046712 None:intergenic 40.0%
AATTGGCACATATTCACTCG+AGG - Chr4:53047148-53047167 None:intergenic 40.0%
ACAAAAAAATCCGTGTTCGC+GGG - Chr4:53041864-53041883 None:intergenic 40.0%
ACAGATGGAAAGCAAAGTAG+TGG - Chr4:53047998-53048017 None:intergenic 40.0%
ACAGGGTTTAATTGTCGATG+TGG + Chr4:53048845-53048864 MsG0480021077.01.T01:CDS 40.0%
ACTCTGTAACAACCACTCAA+GGG + Chr4:53040126-53040145 MsG0480021077.01.T01:intron 40.0%
ACTGGCCGAAATGCATAATT+GGG - Chr4:53040729-53040748 None:intergenic 40.0%
AGAGCAAACTGTTAGCAAAG+AGG - Chr4:53040454-53040473 None:intergenic 40.0%
AGAGCATGAATGAGGGTTTA+GGG - Chr4:53040988-53041007 None:intergenic 40.0%
AGATGTCAATGGGTATCCAT+GGG + Chr4:53041208-53041227 MsG0480021077.01.T01:intron 40.0%
ATACCCGTTTATTATACCCG+TGG + Chr4:53041786-53041805 MsG0480021077.01.T01:intron 40.0%
ATAGGAGTGATGACTTTGAG+TGG - Chr4:53040624-53040643 None:intergenic 40.0%
ATGAATGTGGAAGTGACATG+TGG + Chr4:53043153-53043172 MsG0480021077.01.T01:intron 40.0%
ATGAATGTGGAAGTGACATG+TGG - Chr4:53043172-53043153 None:intergenic 40.0%
ATGATTGTGGAAGTGACATG+TGG + Chr4:53045057-53045076 MsG0480021077.01.T01:intron 40.0%
ATGCACAATATAGGACCTTC+AGG - Chr4:53048470-53048489 None:intergenic 40.0%
ATTTCTGTGATAACTGGGTC+AGG + Chr4:53047766-53047785 MsG0480021077.01.T01:intron 40.0%
CAAAGACATGATGCTGAAAC+AGG + Chr4:53048547-53048566 MsG0480021077.01.T01:CDS 40.0%
CACAGGTATTTAGATACCCA+AGG + Chr4:53041325-53041344 MsG0480021077.01.T01:intron 40.0%
CATGTGAAGGAATTGTTTGC+AGG + Chr4:53046602-53046621 MsG0480021077.01.T01:intron 40.0%
CGACTCAGAACTATACACTT+GGG + Chr4:53038950-53038969 MsG0480021077.01.T01:intron 40.0%
CTAAACACACCATTTCTCTG+CGG + Chr4:53040753-53040772 MsG0480021077.01.T01:intron 40.0%
CTAACTAACCCTAGAGGATT+TGG - Chr4:53046275-53046294 None:intergenic 40.0%
CTGGATCGAGCAAAAGATTA+AGG + Chr4:53040673-53040692 MsG0480021077.01.T01:intron 40.0%
CTTGGGTATCTAAATACCTG+TGG - Chr4:53041327-53041346 None:intergenic 40.0%
GAAGAGAAAAAACGACCACA+CGG - Chr4:53046661-53046680 None:intergenic 40.0%
GACAAAAAAATCCGTGTTCG+CGG - Chr4:53041865-53041884 None:intergenic 40.0%
GACCCAAAACTATTACCACT+TGG + Chr4:53044761-53044780 MsG0480021077.01.T01:intron 40.0%
GACCCAAAACTATTACCACT+TGG - Chr4:53044780-53044761 None:intergenic 40.0%
GAGAAAACAGAATCCATGTC+TGG - Chr4:53048033-53048052 None:intergenic 40.0%
GATAAAATCCGTCATGAGCA+CGG - Chr4:53041833-53041852 None:intergenic 40.0%
GATACCCATTGACATCTCTA+TGG - Chr4:53041205-53041224 None:intergenic 40.0%
GCACGGAACGAATAGTTAAA+TGG - Chr4:53041816-53041835 None:intergenic 40.0%
GCACGTCACCTATATATAAG+GGG + Chr4:53040926-53040945 MsG0480021077.01.T01:intron 40.0%
GCATAAATAGCCTTTACACG+TGG + Chr4:53040164-53040183 MsG0480021077.01.T01:intron 40.0%
GCTTTCGAGAAACAACTTAG+TGG + Chr4:53039260-53039279 MsG0480021077.01.T01:CDS 40.0%
GGAATTGTTTGCAGGTATTC+AGG + Chr4:53046610-53046629 MsG0480021077.01.T01:intron 40.0%
GGGTACAGTTAACCTGAAAT+CGG + Chr4:53038759-53038778 MsG0480021077.01.T01:intron 40.0%
GGGTGATAGATTGAACATCA+TGG - Chr4:53047909-53047928 None:intergenic 40.0%
GGTACAGTTAACCTGAAATC+GGG + Chr4:53038760-53038779 MsG0480021077.01.T01:intron 40.0%
GTACAGTTAACCTGAAATCG+GGG + Chr4:53038761-53038780 MsG0480021077.01.T01:intron 40.0%
GTAGATTCAATCTCGACGTT+TGG - Chr4:53040081-53040100 None:intergenic 40.0%
GTAGCTTACGCAAAATTACG+TGG - Chr4:53046886-53046905 None:intergenic 40.0%
GTTTCAAATTTCCTGCACCA+AGG - Chr4:53048413-53048432 None:intergenic 40.0%
GTTTCAGCATCATGTCTTTG+TGG - Chr4:53048547-53048566 None:intergenic 40.0%
TAAACACACCATTTCTCTGC+GGG + Chr4:53040754-53040773 MsG0480021077.01.T01:intron 40.0%
TAAACCCTAACTAACCCTAG+AGG - Chr4:53046281-53046300 None:intergenic 40.0%
TAAAGCTAGCATGGATGACA+AGG + Chr4:53039152-53039171 MsG0480021077.01.T01:CDS 40.0%
TAACAACCACTCAAGGGTTT+AGG + Chr4:53040132-53040151 MsG0480021077.01.T01:intron 40.0%
TAAGACACTGGGGAAGATAA+AGG - Chr4:53048064-53048083 None:intergenic 40.0%
TAAGCTACACACCGTGATTT+CGG + Chr4:53046898-53046917 MsG0480021077.01.T01:intron 40.0%
TAGATACCCAAGGATATTCG+CGG + Chr4:53041335-53041354 MsG0480021077.01.T01:intron 40.0%
TATTATACTACCCGTACCCA+TGG - Chr4:53041227-53041246 None:intergenic 40.0%
TCATATTTATCCAACAGGGC+GGG - Chr4:53041256-53041275 None:intergenic 40.0%
TCGACTCAGAACTATACACT+TGG + Chr4:53038949-53038968 MsG0480021077.01.T01:intron 40.0%
TGAAATGTGAGAGAGTCTGA+TGG + Chr4:53044584-53044603 MsG0480021077.01.T01:intron 40.0%
TGAATAAGAGATGGAAGGAG+AGG - Chr4:53048341-53048360 None:intergenic 40.0%
TGAGACTAGCAACATATGCT+CGG - Chr4:53040346-53040365 None:intergenic 40.0%
TGATTCCCTCGACAGATTAT+TGG - Chr4:53040272-53040291 None:intergenic 40.0%
TGCATCATATATGCAAGGTC+TGG - Chr4:53041178-53041197 None:intergenic 40.0%
TGCATGTTTGGTATCACAGT+AGG + Chr4:53046822-53046841 MsG0480021077.01.T01:intron 40.0%
TGTCAGAGAGAAGCAGTAAA+AGG + Chr4:53046167-53046186 MsG0480021077.01.T01:intron 40.0%
TGTCCGTGTCCATAAAGTAA+CGG + Chr4:53041755-53041774 MsG0480021077.01.T01:intron 40.0%
TGTTCTCGTTGTCGGATTAT+TGG + Chr4:53039093-53039112 MsG0480021077.01.T01:CDS 40.0%
TGTTTGCAGGTATTCAGGTA+TGG + Chr4:53046615-53046634 MsG0480021077.01.T01:intron 40.0%
TTACTTTATGGACACGGACA+CGG - Chr4:53041755-53041774 None:intergenic 40.0%
TTCTTGTGTAAGTCTCAACC+TGG + Chr4:53047869-53047888 MsG0480021077.01.T01:intron 40.0%
TTGACTACCATGCTTATGAG+AGG - Chr4:53047600-53047619 None:intergenic 40.0%
TTGAGTGGTTGTTACAGAGT+TGG - Chr4:53040126-53040145 None:intergenic 40.0%
! AAAGTAGTGGAGACTTCCAA+TGG - Chr4:53047985-53048004 None:intergenic 40.0%
! AAATTTTGCCTGCTGCAGAT+TGG - Chr4:53047949-53047968 None:intergenic 40.0%
! AATCTCTGCTGCTTGGTAAT+GGG - Chr4:53047822-53047841 None:intergenic 40.0%
! AATGGTGTGTTTAGAGTCAC+TGG - Chr4:53040747-53040766 None:intergenic 40.0%
! AATTTTGCCTGCTGCAGATT+GGG - Chr4:53047948-53047967 None:intergenic 40.0%
! AGTGGAATAGTTTGTGCAAG+GGG - Chr4:53040606-53040625 None:intergenic 40.0%
! CACACACACACACAAGATTT+TGG - Chr4:53041573-53041592 None:intergenic 40.0%
! CAGTTGTTCTAGGCATTTGT+TGG - Chr4:53041067-53041086 None:intergenic 40.0%
! CTTAATCTTTTGCTCGATCC+AGG - Chr4:53040675-53040694 None:intergenic 40.0%
! GAGTGGAATAGTTTGTGCAA+GGG - Chr4:53040607-53040626 None:intergenic 40.0%
! GGCATTTGTTGGTTGTAGAT+TGG - Chr4:53041056-53041075 None:intergenic 40.0%
! TACCCGTTACTTTATGGACA+CGG - Chr4:53041761-53041780 None:intergenic 40.0%
! TGAGTGGAATAGTTTGTGCA+AGG - Chr4:53040608-53040627 None:intergenic 40.0%
! TGAGTTTAGCTCAGTTGGTT+GGG - Chr4:53045915-53045934 None:intergenic 40.0%
! TGCTTTCCATCTGTCATTTC+CGG + Chr4:53048004-53048023 MsG0480021077.01.T01:intron 40.0%
! TGTTGGTTGTAGATTGGTAG+GGG - Chr4:53041050-53041069 None:intergenic 40.0%
! TTAGAAATTTTACAGGGCGC+AGG + Chr4:53044697-53044716 MsG0480021077.01.T01:intron 40.0%
! TTCACTCGAGGTATCAAACA+AGG - Chr4:53047136-53047155 None:intergenic 40.0%
! TTCTGAAAACAGAGAGAGCA+CGG + Chr4:53047219-53047238 MsG0480021077.01.T01:intron 40.0%
! TTTATTTGGCTCAGGTTCAG+AGG + Chr4:53048754-53048773 MsG0480021077.01.T01:CDS 40.0%
!! AATAAGCGAGTTGGTTTGAC+AGG + Chr4:53048827-53048846 MsG0480021077.01.T01:CDS 40.0%
!! AGTTTCAGGTTCCACAGAAA+TGG - Chr4:53048720-53048739 None:intergenic 40.0%
!! ATAAGCGAGTTGGTTTGACA+GGG + Chr4:53048828-53048847 MsG0480021077.01.T01:CDS 40.0%
!! CAAATCCTCTAGGGTTAGTT+AGG + Chr4:53046273-53046292 MsG0480021077.01.T01:intron 40.0%
!! CATCATGTTTCAAGTTGTCG+TGG + Chr4:53039117-53039136 MsG0480021077.01.T01:CDS 40.0%
!! CGAGCTTAACTAAGTTGGTA+TGG - Chr4:53041900-53041919 None:intergenic 40.0%
!! CTGATTTTCTGGGGATGTTT+CGG + Chr4:53043041-53043060 MsG0480021077.01.T01:intron 40.0%
!! CTGATTTTCTGGGGATGTTT+CGG - Chr4:53043060-53043041 None:intergenic 40.0%
!! GAATTTTGGATTTTGAGGGG+CGG - Chr4:53044372-53044391 None:intergenic 40.0%
!! GGGTTTGTTAGTTTGAGCTT+GGG + Chr4:53048174-53048193 MsG0480021077.01.T01:intron 40.0%
!! TCATCCATGCTAGCTTTATG+AGG - Chr4:53039150-53039169 None:intergenic 40.0%
!! TGGGTTTGTTAGTTTGAGCT+TGG + Chr4:53048173-53048192 MsG0480021077.01.T01:intron 40.0%
!!! AAGAATTGGAGCTGGTTTTG+AGG + Chr4:53049426-53049445 MsG0480021077.01.T01:three_prime_UTR 40.0%
!!! ACTGGAAGTTTTAGGTTCCA+CGG - Chr4:53048684-53048703 None:intergenic 40.0%
!!! AGTTTTAGGTTCCACGGAAA+TGG - Chr4:53048678-53048697 None:intergenic 40.0%
!!! CTCATGACGGATTTTATCCA+CGG + Chr4:53041835-53041854 MsG0480021077.01.T01:intron 40.0%
!!! TCATGACGGATTTTATCCAC+GGG + Chr4:53041836-53041855 MsG0480021077.01.T01:intron 40.0%
!!! TGTTACAGAGTTGGTTTTCG+AGG - Chr4:53040117-53040136 None:intergenic 40.0%
!!! TTTTGGTGGTTTGTTGGATG+TGG + Chr4:53046793-53046812 MsG0480021077.01.T01:intron 40.0%
AAAACCCGATGCTCTTGAAG+AGG - Chr4:53040583-53040602 None:intergenic 45.0%
AAACACACCATTTCTCTGCG+GGG + Chr4:53040755-53040774 MsG0480021077.01.T01:intron 45.0%
AAACCCGATGCTCTTGAAGA+GGG - Chr4:53040582-53040601 None:intergenic 45.0%
AAGCGACCAATAATCTGTCG+AGG + Chr4:53040263-53040282 MsG0480021077.01.T01:intron 45.0%
AAGGGATGATGCTGCAAGAT+GGG - Chr4:53048579-53048598 None:intergenic 45.0%
AAGGTCTGGTGTTTGAACCT+CGG - Chr4:53041164-53041183 None:intergenic 45.0%
AGAGATACCCGCACAGATAT+GGG - Chr4:53041293-53041312 None:intergenic 45.0%
AGAGCACGGAAAAGGTCTAT+TGG + Chr4:53047233-53047252 MsG0480021077.01.T01:intron 45.0%
AGATACCCAAGGATATTCGC+GGG + Chr4:53041336-53041355 MsG0480021077.01.T01:intron 45.0%
AGCAACTGCAATAAGCGAGT+TGG + Chr4:53048818-53048837 MsG0480021077.01.T01:CDS 45.0%
AGCGACCAATAATCTGTCGA+GGG + Chr4:53040264-53040283 MsG0480021077.01.T01:intron 45.0%
AGCGATGTACAGCACAGAAA+AGG - Chr4:53048874-53048893 None:intergenic 45.0%
AGCTAAACTCACGAGGACAA+AGG + Chr4:53045924-53045943 MsG0480021077.01.T01:intron 45.0%
AGCTGAGGTTTCCGAAATCA+CGG - Chr4:53046912-53046931 None:intergenic 45.0%
AGGAAACGAAAACCTTGACG+TGG - Chr4:53046436-53046455 None:intergenic 45.0%
AGGGTTATATTGTGAAGCGC+TGG - Chr4:53039982-53040001 None:intergenic 45.0%
ATATCTAACTCGGGTAACGC+CGG - Chr4:53042360-53042379 None:intergenic 45.0%
ATGGTTTATGGAGTTGCCCT+AGG + Chr4:53038858-53038877 MsG0480021077.01.T01:intron 45.0%
ATGTTGAGGTTGCTTACGAG+TGG + Chr4:53039058-53039077 MsG0480021077.01.T01:intron 45.0%
CAAAGGTAGAGAGAGAGAGA+TGG - Chr4:53046231-53046250 None:intergenic 45.0%
CACAATATAGGACCTTCAGG+AGG - Chr4:53048467-53048486 None:intergenic 45.0%
CACACGCACATGTGCAAATA+TGG + Chr4:53038839-53038858 MsG0480021077.01.T01:intron 45.0%
CACTGGCCGAAATGCATAAT+TGG - Chr4:53040730-53040749 None:intergenic 45.0%
CAGACGTCATCAATATGACC+AGG + Chr4:53041090-53041109 MsG0480021077.01.T01:intron 45.0%
CAGTGGTGAGCTCAATTGTT+TGG + Chr4:53046736-53046755 MsG0480021077.01.T01:intron 45.0%
CATATTTATCCAACAGGGCG+GGG - Chr4:53041255-53041274 None:intergenic 45.0%
CCACAGAAGTGACTTCTTAC+GGG - Chr4:53042998-53043017 None:intergenic 45.0%
CCCACAGAAGTGACTTCTTA+CGG - Chr4:53042999-53043018 None:intergenic 45.0%
CCGTAAGAAGTCACTTCTGT+GGG + Chr4:53042996-53043015 MsG0480021077.01.T01:intron 45.0%
CCTGTAAGAAGTCCCTTCAA+CGG - Chr4:53044346-53044365 None:intergenic 45.0%
CCTTCATCCCAAATCCTCTA+GGG + Chr4:53046264-53046283 MsG0480021077.01.T01:intron 45.0%
CTGTAAGAAGTCCCTTCAAC+GGG - Chr4:53044345-53044364 None:intergenic 45.0%
CTTGATCTTGCTGCTACTCA+TGG + Chr4:53039284-53039303 MsG0480021077.01.T01:CDS 45.0%
GAATGCAAAGGAGGAGAAAG+AGG + Chr4:53042292-53042311 MsG0480021077.01.T01:intron 45.0%
GACTAACGGAACATGACCTT+TGG - Chr4:53040200-53040219 None:intergenic 45.0%
GAGACTAGCAACATATGCTC+GGG - Chr4:53040345-53040364 None:intergenic 45.0%
GAGATGTCAATGGGTATCCA+TGG + Chr4:53041207-53041226 MsG0480021077.01.T01:intron 45.0%
GATTGGTGTGTTGCATGTGA+AGG + Chr4:53046589-53046608 MsG0480021077.01.T01:intron 45.0%
GCACTTAGAGCACATGTTCA+TGG - Chr4:53048525-53048544 None:intergenic 45.0%
GCATCCTCATAAAGCTAGCA+TGG + Chr4:53039143-53039162 MsG0480021077.01.T01:CDS 45.0%
GGATGCTTCGTTTGTCTCAA+TGG + Chr4:53038782-53038801 MsG0480021077.01.T01:intron 45.0%
GTCCGTGTCCATAAAGTAAC+GGG + Chr4:53041756-53041775 MsG0480021077.01.T01:intron 45.0%
GTTACAATTGGACACCGATG+TGG - Chr4:53039766-53039785 None:intergenic 45.0%
TAACGTGCAACAGACACAAC+AGG + Chr4:53039394-53039413 MsG0480021077.01.T01:intron 45.0%
TAAGAGATGGAAGGAGAGGA+AGG - Chr4:53048337-53048356 None:intergenic 45.0%
TACTAGTGTGCATGTCGCAA+GGG + Chr4:53039688-53039707 MsG0480021077.01.T01:intron 45.0%
TAGAGATACCCGCACAGATA+TGG - Chr4:53041294-53041313 None:intergenic 45.0%
TATTCGTTCCGTGCTCATGA+CGG + Chr4:53041822-53041841 MsG0480021077.01.T01:intron 45.0%
TCAATGGGTATCCATGGGTA+CGG + Chr4:53041213-53041232 MsG0480021077.01.T01:intron 45.0%
TCCTTCATCCCAAATCCTCT+AGG + Chr4:53046263-53046282 MsG0480021077.01.T01:intron 45.0%
TCGACGTTTGGATATCAGAG+AGG - Chr4:53040069-53040088 None:intergenic 45.0%
TCGTTTGTCTCAATGGACGA+AGG + Chr4:53038789-53038808 MsG0480021077.01.T01:intron 45.0%
TCTCTATACGGGTAATCCAC+AGG + Chr4:53041308-53041327 MsG0480021077.01.T01:intron 45.0%
TCTGTGCGGGTATCTCTATA+CGG + Chr4:53041296-53041315 MsG0480021077.01.T01:intron 45.0%
TGAGTCATCATGCATGCACT+TGG + Chr4:53047179-53047198 MsG0480021077.01.T01:intron 45.0%
TGATTGCCTAAACCCTTGAG+TGG - Chr4:53040141-53040160 None:intergenic 45.0%
TGCATGTCCTCTCATAAGCA+TGG + Chr4:53047590-53047609 MsG0480021077.01.T01:intron 45.0%
TGGAGTTGCCCTAGGAATAT+TGG + Chr4:53038866-53038885 MsG0480021077.01.T01:intron 45.0%
TGGTAAGCACGACCTATAAC+AGG + Chr4:53039304-53039323 MsG0480021077.01.T01:intron 45.0%
TGTAAATCCCAATCTGCAGC+AGG + Chr4:53047938-53047957 MsG0480021077.01.T01:intron 45.0%
TGTAGATGGGGATAGGATAG+TGG + Chr4:53047364-53047383 MsG0480021077.01.T01:intron 45.0%
TTGCAGTTGCTGCAACGTTT+CGG - Chr4:53048809-53048828 None:intergenic 45.0%
TTTCTGAACGCCACGTGTAA+AGG - Chr4:53040177-53040196 None:intergenic 45.0%
TTTGGCGGTTACAGATTCGT+AGG - Chr4:53040878-53040897 None:intergenic 45.0%
TTTGTTCTCAGCTGCACCAT+TGG + Chr4:53047966-53047985 MsG0480021077.01.T01:intron 45.0%
! AAACAGAGAGAGCACGGAAA+AGG + Chr4:53047225-53047244 MsG0480021077.01.T01:intron 45.0%
! ACGTCAAGGTTTTCGTTTCC+TGG + Chr4:53046435-53046454 MsG0480021077.01.T01:intron 45.0%
! AGAGCGTTTGACGCTCATAA+AGG - Chr4:53040418-53040437 None:intergenic 45.0%
! AGAGGCTTGCTTTGGACTAT+TGG - Chr4:53040051-53040070 None:intergenic 45.0%
! CGCCCTGGTTGAAACTATTT+TGG + Chr4:53039556-53039575 MsG0480021077.01.T01:CDS 45.0%
! GAATCTCTGCTGCTTGGTAA+TGG - Chr4:53047823-53047842 None:intergenic 45.0%
! GAGAGCATGAATGAGGGTTT+AGG - Chr4:53040989-53041008 None:intergenic 45.0%
! GAGTGGTGATCTAAAACCGA+AGG + Chr4:53048778-53048797 MsG0480021077.01.T01:CDS 45.0%
! GATATCAGAGAGGCTTGCTT+TGG - Chr4:53040059-53040078 None:intergenic 45.0%
! GCTTGCTTTGGACTATTGGA+TGG - Chr4:53040047-53040066 None:intergenic 45.0%
! GGTGATCTAAAACCGAAGGA+TGG + Chr4:53048782-53048801 MsG0480021077.01.T01:CDS 45.0%
! GTGAGTTTAGCTCAGTTGGT+TGG - Chr4:53045916-53045935 None:intergenic 45.0%
! TAGAGGATTTGGGATGAAGG+AGG - Chr4:53046264-53046283 None:intergenic 45.0%
! TCGGTGTCCAATTGTAACCA+AGG + Chr4:53039768-53039787 MsG0480021077.01.T01:intron 45.0%
! TTAGCCCTCTTCAAGAGCAT+CGG + Chr4:53040575-53040594 MsG0480021077.01.T01:intron 45.0%
! TTCGACGACCGATACCTTTT+AGG - Chr4:53039239-53039258 None:intergenic 45.0%
!! ATCTCTGCTGCTTGGTAATG+GGG - Chr4:53047821-53047840 None:intergenic 45.0%
!! CTGGTCATATTGATGACGTC+TGG - Chr4:53041092-53041111 None:intergenic 45.0%
!! GGTACTTGGTCTTGGTCATA+GGG + Chr4:53049113-53049132 MsG0480021077.01.T01:three_prime_UTR 45.0%
!! TAAAAGGTATCGGTCGTCGA+AGG + Chr4:53039238-53039257 MsG0480021077.01.T01:CDS 45.0%
!! TGTACTGGTTTGGTGGAAGT+TGG + Chr4:53049212-53049231 MsG0480021077.01.T01:three_prime_UTR 45.0%
!! TTGTGAAGCGCTGGTGTTTA+TGG - Chr4:53039973-53039992 None:intergenic 45.0%
!!! GGGTTTTCGGGTTACTTGAT+CGG + Chr4:53044268-53044287 MsG0480021077.01.T01:intron 45.0%
!! AAATTAATAAAAATGAAAAA+TGG + Chr4:53042934-53042953 MsG0480021077.01.T01:intron 5.0%
!! AAATTAATAAAAATGAAAAA+TGG - Chr4:53042953-53042934 None:intergenic 5.0%
!! AATATTATATATATAAAGTA+AGG + Chr4:53043983-53044002 MsG0480021077.01.T01:intron 5.0%
!! AATTAATAAAAATGAAAAAT+GGG + Chr4:53042935-53042954 MsG0480021077.01.T01:intron 5.0%
!! AATTAATAAAAATGAAAAAT+GGG - Chr4:53042954-53042935 None:intergenic 5.0%
!! ATATATATATATATAAAGTA+AGG - Chr4:53045436-53045455 None:intergenic 5.0%
!!! ATATTTTATTTAACAAAAAT+CGG + Chr4:53044247-53044266 MsG0480021077.01.T01:intron 5.0%
!!! ATATTTTATTTAACAAAAAT+CGG - Chr4:53044266-53044247 None:intergenic 5.0%
!!! ATTTTTGTTAAATAAAATAT+TGG + Chr4:53043094-53043113 MsG0480021077.01.T01:intron 5.0%
!!! ATTTTTGTTAAATAAAATAT+TGG - Chr4:53043113-53043094 None:intergenic 5.0%
!!! TAATTTTATTATATTATTGA+TGG + Chr4:53042142-53042161 MsG0480021077.01.T01:intron 5.0%
!!! TATTAATTCTTTTTTTTTTT+TGG + Chr4:53045839-53045858 MsG0480021077.01.T01:intron 5.0%
AACAAACAGAGATGCCACGC+AGG + Chr4:53040382-53040401 MsG0480021077.01.T01:intron 50.0%
AACACACCATTTCTCTGCGG+GGG + Chr4:53040756-53040775 MsG0480021077.01.T01:intron 50.0%
AATGGCTGGGATATCGACAC+TGG - Chr4:53048702-53048721 None:intergenic 50.0%
ACAGATATGGGGACGAGCAA+GGG - Chr4:53041281-53041300 None:intergenic 50.0%
ACATATGTCTCAACCTGGCG+AGG - Chr4:53039599-53039618 None:intergenic 50.0%
ACGTCTGGTGCAGTTGTTCT+AGG - Chr4:53041077-53041096 None:intergenic 50.0%
ACGTGGCGTTCAGAAACCAA+AGG + Chr4:53040181-53040200 MsG0480021077.01.T01:intron 50.0%
AGCAATCCGATCAAGTAGCC+CGG + Chr4:53043064-53043083 MsG0480021077.01.T01:intron 50.0%
AGCGAGAATTATGGGCACGT+TGG - Chr4:53040841-53040860 None:intergenic 50.0%
AGCTTCTCAGCCTTGACAAC+CGG - Chr4:53048965-53048984 None:intergenic 50.0%
AGTCACTTCTGTGGGAGTCA+TGG + Chr4:53043004-53043023 MsG0480021077.01.T01:intron 50.0%
AGTTGTTGTGAGGCACACTG+AGG - Chr4:53040903-53040922 None:intergenic 50.0%
CAAAGCAAACCCGGTTGTCA+AGG + Chr4:53048952-53048971 MsG0480021077.01.T01:CDS 50.0%
CAACGTTTCGGACCATCCTT+CGG - Chr4:53048797-53048816 None:intergenic 50.0%
CAAGGGATGATGCTGCAAGA+TGG - Chr4:53048580-53048599 None:intergenic 50.0%
CAATGGGTATCCATGGGTAC+GGG + Chr4:53041214-53041233 MsG0480021077.01.T01:intron 50.0%
CAGCTTGTAGATCCACGTCA+AGG + Chr4:53046421-53046440 MsG0480021077.01.T01:intron 50.0%
CAGGTTCCACAGAAATGGCT+GGG - Chr4:53048715-53048734 None:intergenic 50.0%
CATATGTCTCAACCTGGCGA+GGG - Chr4:53039598-53039617 None:intergenic 50.0%
CATCTTGCAGCATCATCCCT+TGG + Chr4:53048578-53048597 MsG0480021077.01.T01:CDS 50.0%
CATGATGCTGAAACAGGAGC+AGG + Chr4:53048553-53048572 MsG0480021077.01.T01:CDS 50.0%
CCAACTGAGCTAAACTCACG+AGG + Chr4:53045917-53045936 MsG0480021077.01.T01:intron 50.0%
CCCGTAAGAAGTCACTTCTG+TGG + Chr4:53042995-53043014 MsG0480021077.01.T01:intron 50.0%
CCGTTGAAGGGACTTCTTAC+AGG + Chr4:53044343-53044362 MsG0480021077.01.T01:intron 50.0%
CGAAGAAGACAATGCAGCGT+CGG + Chr4:53039193-53039212 MsG0480021077.01.T01:CDS 50.0%
CGATATCCCAGCCATTTCTG+TGG + Chr4:53048706-53048725 MsG0480021077.01.T01:CDS 50.0%
CTACTAGTGTGCATGTCGCA+AGG + Chr4:53039687-53039706 MsG0480021077.01.T01:intron 50.0%
CTGTACCCATAACCCATGCA+AGG - Chr4:53038747-53038766 None:intergenic 50.0%
CTGTGCGGGTATCTCTATAC+GGG + Chr4:53041297-53041316 MsG0480021077.01.T01:intron 50.0%
GAATGTCAAGCTCCTCCTGA+AGG + Chr4:53048452-53048471 MsG0480021077.01.T01:CDS 50.0%
GACCTATAACAGGTGCAACC+TGG + Chr4:53039314-53039333 MsG0480021077.01.T01:intron 50.0%
GACGTGCATGAGTTGTTGTG+AGG - Chr4:53040913-53040932 None:intergenic 50.0%
GAGATACCCGCACAGATATG+GGG - Chr4:53041292-53041311 None:intergenic 50.0%
GATGCTCTTGAAGAGGGCTA+AGG - Chr4:53040576-53040595 None:intergenic 50.0%
GCATATCAACTGATCGCACC+TGG - Chr4:53041111-53041130 None:intergenic 50.0%
GCGAGAATTATGGGCACGTT+GGG - Chr4:53040840-53040859 None:intergenic 50.0%
GGACTTTACACAGCCCACAA+AGG + Chr4:53040947-53040966 MsG0480021077.01.T01:intron 50.0%
GTCCAGGTTGCACCTGTTAT+AGG - Chr4:53039319-53039338 None:intergenic 50.0%
GTCGACGCGTCAATTATGAG+CGG - Chr4:53038934-53038953 None:intergenic 50.0%
TAGGTTCCACGGAAATGGCT+GGG - Chr4:53048673-53048692 None:intergenic 50.0%
TATCTAACTCGGGTAACGCC+GGG - Chr4:53042359-53042378 None:intergenic 50.0%
TCACAGGAATCTCTGCTGCT+TGG - Chr4:53047829-53047848 None:intergenic 50.0%
TCAGGTTCCACAGAAATGGC+TGG - Chr4:53048716-53048735 None:intergenic 50.0%
TGCCATAGCCAAAGCAAACC+CGG + Chr4:53048943-53048962 MsG0480021077.01.T01:CDS 50.0%
TTAACGAGTACGGATACCCG+CGG + Chr4:53041711-53041730 MsG0480021077.01.T01:intron 50.0%
TTAGGTTCCACGGAAATGGC+TGG - Chr4:53048674-53048693 None:intergenic 50.0%
TTCTCTTCTTCTCGAAGCCG+TGG + Chr4:53046673-53046692 MsG0480021077.01.T01:intron 50.0%
TTGCACGGAACAGCTTCAAG+AGG - Chr4:53039470-53039489 None:intergenic 50.0%
TTTGGCTATGGCATCTCGTG+CGG - Chr4:53048936-53048955 None:intergenic 50.0%
! AACCGGGTTTGCTTTGGCTA+TGG - Chr4:53048948-53048967 None:intergenic 50.0%
! AACGAAGCATCCCCGATTTC+AGG - Chr4:53038774-53038793 None:intergenic 50.0%
! AATCTTTGGGTCCTTGGTGC+AGG + Chr4:53048399-53048418 MsG0480021077.01.T01:intron 50.0%
! ATTTTACAGGGCGCAGGAGA+AGG + Chr4:53044703-53044722 MsG0480021077.01.T01:intron 50.0%
! CCCTAGAGGATTTGGGATGA+AGG - Chr4:53046267-53046286 None:intergenic 50.0%
! CCTCGTGAGTTTAGCTCAGT+TGG - Chr4:53045920-53045939 None:intergenic 50.0%
! CTTGACAACCGGGTTTGCTT+TGG - Chr4:53048954-53048973 None:intergenic 50.0%
! TGTGATGGGGTACTTGGTCT+TGG + Chr4:53049105-53049124 MsG0480021077.01.T01:three_prime_UTR 50.0%
! TTTGATGATACCCGTGTCCG+CGG - Chr4:53041731-53041750 None:intergenic 50.0%
!! AATGCAGCGTCGGCAAGATA+AGG + Chr4:53039203-53039222 MsG0480021077.01.T01:CDS 50.0%
!! CTTGGTAATGGGGTTGCAAG+AGG - Chr4:53047811-53047830 None:intergenic 50.0%
!! GGGTACTTGGTCTTGGTCAT+AGG + Chr4:53049112-53049131 MsG0480021077.01.T01:three_prime_UTR 50.0%
!! TAGCCCTCTTCAAGAGCATC+GGG + Chr4:53040576-53040595 MsG0480021077.01.T01:intron 50.0%
!! TTGAGCGTCGAAGTGTCTGT+AGG + Chr4:53041018-53041037 MsG0480021077.01.T01:intron 50.0%
!!! TCAACCAGGGCGTCCTTTTT+TGG - Chr4:53039548-53039567 None:intergenic 50.0%
AATGGCTGGGATATCCACGC+TGG - Chr4:53048660-53048679 None:intergenic 55.0%
ACGCTGGCAGCAGTAACAAC+AGG - Chr4:53048644-53048663 None:intergenic 55.0%
AGGACCATGACTCCCGTTGA+AGG + Chr4:53044330-53044349 MsG0480021077.01.T01:intron 55.0%
AGGATATTCGCGGGTACGCA+TGG + Chr4:53041345-53041364 MsG0480021077.01.T01:intron 55.0%
AGTCCCTTCAACGGGAGTCA+TGG - Chr4:53044337-53044356 None:intergenic 55.0%
ATATCTAACCCGGGCAACGC+CGG + Chr4:53044979-53044998 MsG0480021077.01.T01:intron 55.0%
ATCCAAGTGCAGCGACTAGG+AGG + Chr4:53040642-53040661 MsG0480021077.01.T01:intron 55.0%
ATGGGGTTGCAAGAGGCTGA+TGG - Chr4:53047804-53047823 None:intergenic 55.0%
CACAGATATGGGGACGAGCA+AGG - Chr4:53041282-53041301 None:intergenic 55.0%
CAGAATCCATGTCTGGCAGC+CGG - Chr4:53048026-53048045 None:intergenic 55.0%
CCTAGTCGCTGCACTTGGAT+AGG - Chr4:53040642-53040661 None:intergenic 55.0%
CCTATCCAAGTGCAGCGACT+AGG + Chr4:53040639-53040658 MsG0480021077.01.T01:intron 55.0%
GAAGCTGTTCCGTGCAAGTC+AGG + Chr4:53039473-53039492 MsG0480021077.01.T01:CDS 55.0%
GAATAGAGTTGCAGCCCGTG+TGG + Chr4:53046643-53046662 MsG0480021077.01.T01:intron 55.0%
GCGTACCCGCGAATATCCTT+GGG - Chr4:53041344-53041363 None:intergenic 55.0%
GCTTCTCAGCCTTGACAACC+GGG - Chr4:53048964-53048983 None:intergenic 55.0%
GGACCATGACTCCCGTTGAA+GGG + Chr4:53044331-53044350 MsG0480021077.01.T01:intron 55.0%
GGATATCCCAGCCATTTCCG+TGG + Chr4:53048664-53048683 MsG0480021077.01.T01:CDS 55.0%
GGGTTTCCGGGCTACTTGAT+CGG - Chr4:53043073-53043092 None:intergenic 55.0%
TCATTTCCGGCTGCCAGACA+TGG + Chr4:53048017-53048036 MsG0480021077.01.T01:intron 55.0%
TGCGTACCCGCGAATATCCT+TGG - Chr4:53041345-53041364 None:intergenic 55.0%
TGCTCGTCCCCATATCTGTG+CGG + Chr4:53041282-53041301 MsG0480021077.01.T01:intron 55.0%
TGGCAGCCGGAAATGACAGA+TGG - Chr4:53048013-53048032 None:intergenic 55.0%
TGTTGTTACTGCTGCCAGCG+TGG + Chr4:53048643-53048662 MsG0480021077.01.T01:CDS 55.0%
TTTAGATACCCGGCGTTGCC+CGG - Chr4:53044991-53045010 None:intergenic 55.0%
TTTATCCAACAGGGCGGGGA+CGG - Chr4:53041251-53041270 None:intergenic 55.0%
! ACGCGCCTTGCATGGGTTAT+GGG + Chr4:53038739-53038758 MsG0480021077.01.T01:CDS 55.0%
! AGGCACACTGAGGCATTTGG+CGG - Chr4:53040893-53040912 None:intergenic 55.0%
! ATTTTACAGGGCGCGGGAGA+AGG - Chr4:53042636-53042655 None:intergenic 55.0%
! CGGAAGTGCGGTAATCGAAC+GGG - Chr4:53048916-53048935 None:intergenic 55.0%
! GCGGAAGTGCGGTAATCGAA+CGG - Chr4:53048917-53048936 None:intergenic 55.0%
! GCGTCGGCAAGATAAGGAGA+AGG + Chr4:53039209-53039228 MsG0480021077.01.T01:CDS 55.0%
! GTGAGGCACACTGAGGCATT+TGG - Chr4:53040896-53040915 None:intergenic 55.0%
! TTGATGATACCCGTGTCCGC+GGG - Chr4:53041730-53041749 None:intergenic 55.0%
!!! ATGGGAATTTTGGCTGCGCC+AGG - Chr4:53047890-53047909 None:intergenic 55.0%
!!! CTTTTTTTGGGTGGTGGCCG+AGG + Chr4:53041144-53041163 MsG0480021077.01.T01:intron 55.0%
AAGGCGCGTGTCCTCCTTAG+AGG - Chr4:53038728-53038747 None:intergenic 60.0%
AATATCCGTCCCCGCCCTGT+TGG + Chr4:53041243-53041262 MsG0480021077.01.T01:intron 60.0%
ACACCATTTCTCTGCGGGGG+AGG + Chr4:53040759-53040778 MsG0480021077.01.T01:intron 60.0%
ACCATTTCTCTGCGGGGGAG+GGG + Chr4:53040761-53040780 MsG0480021077.01.T01:intron 60.0%
AGCCTCCTAGTCGCTGCACT+TGG - Chr4:53040647-53040666 None:intergenic 60.0%
AGGCGCGTGTCCTCCTTAGA+GGG - Chr4:53038727-53038746 None:intergenic 60.0%
AGGGCGCAGGAGAAGGCAAT+AGG + Chr4:53044710-53044729 MsG0480021077.01.T01:intron 60.0%
AGTACGGATACCCGCGGACA+CGG + Chr4:53041717-53041736 MsG0480021077.01.T01:intron 60.0%
AGTTCTTGACCACCCTCGCC+AGG + Chr4:53039583-53039602 MsG0480021077.01.T01:CDS 60.0%
ATGTCTCAACCTGGCGAGGG+TGG - Chr4:53039595-53039614 None:intergenic 60.0%
CACCATTTCTCTGCGGGGGA+GGG + Chr4:53040760-53040779 MsG0480021077.01.T01:intron 60.0%
CGACTAGGAGGCTACTACCC+TGG + Chr4:53040654-53040673 MsG0480021077.01.T01:intron 60.0%
CGCAGGAGAAGGCAATAGGG+GGG + Chr4:53044714-53044733 MsG0480021077.01.T01:intron 60.0%
GAGGCCAAAAAAGGACGCCC+TGG + Chr4:53039541-53039560 MsG0480021077.01.T01:CDS 60.0%
GCAGGAGAAGGCAATAGGGG+GGG + Chr4:53044715-53044734 MsG0480021077.01.T01:intron 60.0%
GCGCAGGAGAAGGCAATAGG+GGG + Chr4:53044713-53044732 MsG0480021077.01.T01:intron 60.0%
GCGGGAGAAGGCAATAGGGT+GGG - Chr4:53042624-53042643 None:intergenic 60.0%
GCTCGTCCCCATATCTGTGC+GGG + Chr4:53041283-53041302 MsG0480021077.01.T01:intron 60.0%
GGCGCAGGAGAAGGCAATAG+GGG + Chr4:53044712-53044731 MsG0480021077.01.T01:intron 60.0%
GGCTCAGGTTCAGAGGAGAG+TGG + Chr4:53048761-53048780 MsG0480021077.01.T01:CDS 60.0%
GGGCGCAGGAGAAGGCAATA+GGG + Chr4:53044711-53044730 MsG0480021077.01.T01:intron 60.0%
TATCTAACCCGGGCAACGCC+GGG + Chr4:53044980-53044999 MsG0480021077.01.T01:intron 60.0%
TGGCATCTCGTGCGGAAGTG+CGG - Chr4:53048928-53048947 None:intergenic 60.0%
TTAGATACCCGGCGTTGCCC+GGG - Chr4:53044990-53045009 None:intergenic 60.0%
! CACGCGCCTTGCATGGGTTA+TGG + Chr4:53038738-53038757 MsG0480021077.01.T01:CDS 60.0%
AGGAGGACACGCGCCTTGCA+TGG + Chr4:53038731-53038750 MsG0480021077.01.T01:CDS 65.0%
AGGGCGCGGGAGAAGGCAAT+AGG - Chr4:53042629-53042648 None:intergenic 65.0%
CCATTTCTCTGCGGGGGAGG+GGG + Chr4:53040762-53040781 MsG0480021077.01.T01:intron 65.0%
CGCGGGAGAAGGCAATAGGG+TGG - Chr4:53042625-53042644 None:intergenic 65.0%
GGAGGACACGCGCCTTGCAT+GGG + Chr4:53038732-53038751 MsG0480021077.01.T01:CDS 65.0%
GGGCGCGGGAGAAGGCAATA+GGG - Chr4:53042628-53042647 None:intergenic 65.0%
GTACGGATACCCGCGGACAC+GGG + Chr4:53041718-53041737 MsG0480021077.01.T01:intron 65.0%
TCCACGGGAACCCGCGAACA+CGG + Chr4:53041851-53041870 MsG0480021077.01.T01:intron 65.0%
! AAGGTGCTAGCTCGCCTGCG+TGG - Chr4:53040399-53040418 None:intergenic 65.0%
CCCCCTCCCCCGCAGAGAAA+TGG - Chr4:53040765-53040784 None:intergenic 70.0%
TCCGTGTTCGCGGGTTCCCG+TGG - Chr4:53041855-53041874 None:intergenic 70.0%
TCTCTGCGGGGGAGGGGGAA+GGG + Chr4:53040767-53040786 MsG0480021077.01.T01:intron 70.0%
TTCTCTGCGGGGGAGGGGGA+AGG + Chr4:53040766-53040785 MsG0480021077.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr4 gene 53038695 53049447 53038695 ID=MsG0480021077.01;Name=MsG0480021077.01
Chr4 mRNA 53038695 53049447 53038695 ID=MsG0480021077.01.T01;Parent=MsG0480021077.01;Name=MsG0480021077.01.T01;_AED=0.41;_eAED=0.45;_QI=0|0|0.2|0.8|1|1|5|450|377
Chr4 exon 53038695 53038760 53038695 ID=MsG0480021077.01.T01:exon:2902;Parent=MsG0480021077.01.T01
Chr4 exon 53039066 53039305 53039066 ID=MsG0480021077.01.T01:exon:2903;Parent=MsG0480021077.01.T01
Chr4 exon 53039461 53039675 53039461 ID=MsG0480021077.01.T01:exon:2904;Parent=MsG0480021077.01.T01
Chr4 exon 53046739 53046774 53046739 ID=MsG0480021077.01.T01:exon:2905;Parent=MsG0480021077.01.T01
Chr4 exon 53048421 53049447 53048421 ID=MsG0480021077.01.T01:exon:2906;Parent=MsG0480021077.01.T01
Chr4 CDS 53038695 53038760 53038695 ID=MsG0480021077.01.T01:cds;Parent=MsG0480021077.01.T01
Chr4 CDS 53039066 53039305 53039066 ID=MsG0480021077.01.T01:cds;Parent=MsG0480021077.01.T01
Chr4 CDS 53039461 53039675 53039461 ID=MsG0480021077.01.T01:cds;Parent=MsG0480021077.01.T01
Chr4 CDS 53046739 53046774 53046739 ID=MsG0480021077.01.T01:cds;Parent=MsG0480021077.01.T01
Chr4 CDS 53048421 53048997 53048421 ID=MsG0480021077.01.T01:cds;Parent=MsG0480021077.01.T01
Chr4 three_prime_UTR 53048998 53049447 53048998 ID=MsG0480021077.01.T01:three_prime_utr;Parent=MsG0480021077.01.T01
Gene Sequence

>MsG0480021077.01.T01

ATGGAAAATGATTTTATGAATTTTCATTTCCCTCTAAGGAGGACACGCGCCTTGCATGGGTTATGGGTTGCTTACGAGTGGCTTTCGAATTTTTGTTCTCGTTGTCGGATTATTGGACATCATGTTTCAAGTTGTCGTGGCTTGCATCCTCATAAAGCTAGCATGGATGACAAGGGCAAAATGCAAGTGTTTACGAAGAAGACAATGCAGCGTCGGCAAGATAAGGAGAAGGAGAACCTAAAAGGTATCGGTCGTCGAAGGCTTTCGAGAAACAACTTAGTGGTCTTGATCTTGCTGCTACTCATGGTGCAGCCTCTTGAAGCTGTTCCGTGCAAGTCAGGTAATACTTTCCATCTCGCTTTACAAAATGTAGCAAAAGAAATTGTGAGGCCAAAAAAGGACGCCCTGGTTGAAACTATTTTGGAACTAGTTCTTGACCACCCTCGCCAGGTTGAGACATATGTTCATTCTCATGTGTTGAATTTAAATGTTTATACGCTTACAAACAACCTCTTGATTACTGGTGAGCTCAATTGTTTGGTGTTATTGCTTTTGCGGAAATTTGAAACAATGGAACATGAAAAGACTGAATGTCAAGCTCCTCCTGAAGGTCCTATATTGTGCATCAACAACTGTGGATTTTTCGGAAGTGCAGCTACCATGAACATGTGCTCTAAGTGCCACAAAGACATGATGCTGAAACAGGAGCAGGCCCATCTTGCAGCATCATCCCTTGGAAATATTATGAATGGGTCTACAAGCAACACTGAAAAAGAACCTGTTGTTACTGCTGCCAGCGTGGATATCCCAGCCATTTCCGTGGAACCTAAAACTTCCAGTGTCGATATCCCAGCCATTTCTGTGGAACCTGAAACTATCTCTAAGCCTTTTTTATTTGGCTCAGGTTCAGAGGAGAGTGGTGATCTAAAACCGAAGGATGGTCCGAAACGTTGCAGCAACTGCAATAAGCGAGTTGGTTTGACAGGGTTTAATTGTCGATGTGGCAACCTTTTCTGTGCTGTACATCGCTACTCAGACAAGCATGATTGCCCGTTCGATTACCGCACTTCCGCACGAGATGCCATAGCCAAAGCAAACCCGGTTGTCAAGGCTGAGAAGCTTGATAAGATGTGA

Protein sequence

>MsG0480021077.01.T01

MENDFMNFHFPLRRTRALHGLWVAYEWLSNFCSRCRIIGHHVSSCRGLHPHKASMDDKGKMQVFTKKTMQRRQDKEKENLKGIGRRRLSRNNLVVLILLLLMVQPLEAVPCKSGNTFHLALQNVAKEIVRPKKDALVETILELVLDHPRQVETYVHSHVLNLNVYTLTNNLLITGELNCLVLLLLRKFETMEHEKTECQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMMLKQEQAHLAASSLGNIMNGSTSNTEKEPVVTAASVDIPAISVEPKTSSVDIPAISVEPETISKPFLFGSGSEESGDLKPKDGPKRCSNCNKRVGLTGFNCRCGNLFCAVHRYSDKHDCPFDYRTSARDAIAKANPVVKAEKLDKM*