Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015220.01.T01 | KEH34601.1 | 87.222 | 180 | 12 | 3 | 1 | 173 | 1 | 176 | 1.07E-101 | 300 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015220.01.T01 | Q9LQU5 | 62.406 | 133 | 41 | 2 | 36 | 161 | 1 | 131 | 1.37E-51 | 166 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015220.01.T01 | A0A072UYS8 | 87.222 | 180 | 12 | 3 | 1 | 173 | 1 | 176 | 5.11e-102 | 300 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048383.01 | MsG0380015220.01 | 0.805307 | 1.422054e-49 | 7.498030e-47 |
| MsG0080048784.01 | MsG0380015220.01 | 0.811797 | 5.849111e-51 | 3.655106e-48 |
| MsG0180000047.01 | MsG0380015220.01 | 0.801345 | 9.409146e-49 | 4.482954e-46 |
| MsG0180000114.01 | MsG0380015220.01 | 0.804551 | 2.045786e-49 | 1.057880e-46 |
| MsG0180000144.01 | MsG0380015220.01 | 0.803050 | 4.193631e-49 | 2.086458e-46 |
| MsG0180000355.01 | MsG0380015220.01 | 0.801178 | 1.017763e-48 | 4.828755e-46 |
| MsG0180000604.01 | MsG0380015220.01 | 0.810141 | 1.335551e-50 | 7.987958e-48 |
| MsG0180000611.01 | MsG0380015220.01 | 0.837082 | 6.409349e-57 | 8.234404e-54 |
| MsG0180000680.01 | MsG0380015220.01 | 0.809388 | 1.939106e-50 | 1.137041e-47 |
| MsG0180000787.01 | MsG0380015220.01 | 0.800877 | 1.172609e-48 | 5.521422e-46 |
| MsG0180000836.01 | MsG0380015220.01 | 0.803279 | 3.759911e-49 | 1.881709e-46 |
| MsG0180001311.01 | MsG0380015220.01 | 0.855276 | 7.031085e-62 | 1.614594e-58 |
| MsG0180001662.01 | MsG0380015220.01 | 0.828428 | 9.037742e-55 | 8.981140e-52 |
| MsG0180002547.01 | MsG0380015220.01 | 0.803604 | 3.219787e-49 | 1.625013e-46 |
| MsG0180002664.01 | MsG0380015220.01 | 0.840248 | 9.747139e-58 | 1.380312e-54 |
| MsG0180002794.01 | MsG0380015220.01 | 0.814217 | 1.724201e-51 | 1.149961e-48 |
| MsG0180002992.01 | MsG0380015220.01 | 0.818890 | 1.547493e-52 | 1.172997e-49 |
| MsG0180003379.01 | MsG0380015220.01 | 0.800083 | 1.701858e-48 | 7.853346e-46 |
| MsG0180003567.01 | MsG0380015220.01 | 0.832285 | 1.031267e-55 | 1.147311e-52 |
| MsG0180003807.01 | MsG0380015220.01 | 0.830513 | 2.815610e-55 | 2.972776e-52 |
| MsG0180003821.01 | MsG0380015220.01 | 0.807649 | 4.558716e-50 | 2.553015e-47 |
| MsG0180003885.01 | MsG0380015220.01 | 0.816179 | 6.319325e-52 | 4.446199e-49 |
| MsG0180003932.01 | MsG0380015220.01 | 0.810025 | 1.414974e-50 | 8.437956e-48 |
| MsG0180004016.01 | MsG0380015220.01 | 0.800640 | 1.310970e-48 | 6.135606e-46 |
| MsG0180004128.01 | MsG0380015220.01 | 0.806242 | 9.046254e-50 | 4.885791e-47 |
| MsG0180004160.01 | MsG0380015220.01 | 0.821075 | 4.895602e-53 | 3.943188e-50 |
| MsG0180004272.01 | MsG0380015220.01 | 0.816400 | 5.640325e-52 | 3.992466e-49 |
| MsG0180004486.01 | MsG0380015220.01 | 0.806483 | 8.049927e-50 | 4.374267e-47 |
| MsG0180004493.01 | MsG0380015220.01 | 0.837202 | 5.972514e-57 | 7.701723e-54 |
| MsG0180005049.01 | MsG0380015220.01 | 0.804065 | 2.583643e-49 | 1.319484e-46 |
| MsG0180005169.01 | MsG0380015220.01 | 0.818087 | 2.353441e-52 | 1.744588e-49 |
| MsG0180005268.01 | MsG0380015220.01 | 0.806346 | 8.600642e-50 | 4.657205e-47 |
| MsG0180005429.01 | MsG0380015220.01 | 0.808762 | 2.641509e-50 | 1.523136e-47 |
| MsG0180005445.01 | MsG0380015220.01 | 0.831479 | 1.630549e-55 | 1.771674e-52 |
| MsG0180005451.01 | MsG0380015220.01 | 0.801404 | 9.149602e-49 | 4.365726e-46 |
| MsG0180005786.01 | MsG0380015220.01 | 0.822251 | 2.617401e-53 | 2.179105e-50 |
| MsG0180005787.01 | MsG0380015220.01 | 0.826677 | 2.379473e-54 | 2.246747e-51 |
| MsG0180005913.01 | MsG0380015220.01 | 0.807213 | 5.640645e-50 | 3.123458e-47 |
| MsG0180006025.01 | MsG0380015220.01 | 0.816302 | 5.930211e-52 | 4.186731e-49 |
| MsG0180006096.01 | MsG0380015220.01 | 0.834321 | 3.207413e-56 | 3.793307e-53 |
| MsG0180006104.01 | MsG0380015220.01 | 0.849927 | 2.361212e-60 | 4.548684e-57 |
| MsG0280006302.01 | MsG0380015220.01 | -0.802335 | 5.891668e-49 | 2.878531e-46 |
| MsG0280006368.01 | MsG0380015220.01 | 0.820605 | 6.279909e-53 | 4.991675e-50 |
| MsG0280010599.01 | MsG0380015220.01 | 0.837864 | 4.041328e-57 | 5.319162e-54 |
| MsG0280011201.01 | MsG0380015220.01 | 0.808623 | 2.828323e-50 | 1.624880e-47 |
| MsG0280011330.01 | MsG0380015220.01 | 0.814721 | 1.333483e-51 | 9.016387e-49 |
| MsG0280011333.01 | MsG0380015220.01 | 0.823778 | 1.153089e-53 | 1.002561e-50 |
| MsG0280011371.01 | MsG0380015220.01 | 0.807396 | 5.160320e-50 | 2.871132e-47 |
| MsG0380011747.01 | MsG0380015220.01 | 0.800986 | 1.114302e-48 | 5.261483e-46 |
| MsG0380011828.01 | MsG0380015220.01 | 0.800099 | 1.689636e-48 | 7.799881e-46 |
| MsG0380011927.01 | MsG0380015220.01 | 0.834157 | 3.525943e-56 | 4.148724e-53 |
| MsG0380012160.01 | MsG0380015220.01 | 0.817146 | 3.836319e-52 | 2.771551e-49 |
| MsG0380012570.01 | MsG0380015220.01 | 0.813275 | 2.779934e-51 | 1.807326e-48 |
| MsG0380013085.01 | MsG0380015220.01 | 0.802398 | 5.717960e-49 | 2.798215e-46 |
| MsG0380013686.01 | MsG0380015220.01 | 0.825702 | 4.059078e-54 | 3.727763e-51 |
| MsG0380015220.01 | MsG0380016005.01 | 0.800764 | 1.236752e-48 | 5.806311e-46 |
| MsG0380015220.01 | MsG0380016290.01 | 0.801837 | 7.455757e-49 | 3.596877e-46 |
| MsG0380015220.01 | MsG0380016407.01 | 0.812774 | 3.579762e-51 | 2.296174e-48 |
| MsG0380015220.01 | MsG0380016740.01 | 0.860228 | 2.390858e-63 | 6.488127e-60 |
| MsG0380015220.01 | MsG0380017229.01 | 0.812061 | 5.124904e-51 | 3.225286e-48 |
| MsG0380015220.01 | MsG0380017433.01 | 0.837151 | 6.157539e-57 | 7.928077e-54 |
| MsG0380015220.01 | MsG0380018022.01 | 0.840809 | 6.951104e-58 | 1.001643e-54 |
| MsG0380015220.01 | MsG0380018033.01 | 0.805196 | 1.500518e-49 | 7.889229e-47 |
| MsG0380015220.01 | MsG0480018235.01 | 0.804398 | 2.201797e-49 | 1.134060e-46 |
| MsG0380015220.01 | MsG0480018292.01 | 0.851172 | 1.055375e-60 | 2.117640e-57 |
| MsG0380015220.01 | MsG0480018606.01 | 0.805542 | 1.269714e-49 | 6.735142e-47 |
| MsG0380015220.01 | MsG0480018911.01 | 0.823410 | 1.405963e-53 | 1.209500e-50 |
| MsG0380015220.01 | MsG0480019148.01 | 0.810012 | 1.423842e-50 | 8.488047e-48 |
| MsG0380015220.01 | MsG0480019453.01 | 0.803419 | 3.517174e-49 | 1.766628e-46 |
| MsG0380015220.01 | MsG0480020024.01 | 0.824832 | 6.519323e-54 | 5.840775e-51 |
| MsG0380015220.01 | MsG0480020331.01 | 0.803257 | 3.800851e-49 | 1.901123e-46 |
| MsG0380015220.01 | MsG0480020540.01 | 0.814388 | 1.580292e-51 | 1.059004e-48 |
| MsG0380015220.01 | MsG0480021432.01 | 0.815909 | 7.258391e-52 | 5.069052e-49 |
| MsG0380015220.01 | MsG0480021492.01 | 0.873066 | 1.961199e-67 | 8.397327e-64 |
| MsG0380015220.01 | MsG0480021592.01 | 0.802064 | 6.696572e-49 | 3.249231e-46 |
| MsG0380015220.01 | MsG0480022514.01 | 0.812065 | 5.112939e-51 | 3.218206e-48 |
| MsG0380015220.01 | MsG0480023055.01 | 0.810901 | 9.155323e-51 | 5.587611e-48 |
| MsG0380015220.01 | MsG0480023221.01 | 0.812391 | 4.340021e-51 | 2.756144e-48 |
| MsG0380015220.01 | MsG0480023377.01 | 0.825466 | 4.615392e-54 | 4.209994e-51 |
| MsG0380015220.01 | MsG0480023384.01 | 0.817405 | 3.354471e-52 | 2.440725e-49 |
| MsG0380015220.01 | MsG0480023387.01 | 0.821102 | 4.825646e-53 | 3.889648e-50 |
| MsG0380015220.01 | MsG0480023396.01 | 0.809444 | 1.886576e-50 | 1.107832e-47 |
| MsG0380015220.01 | MsG0480023867.01 | 0.816398 | 5.644737e-52 | 3.995414e-49 |
| MsG0380015220.01 | MsG0580024084.01 | 0.817592 | 3.044679e-52 | 2.226615e-49 |
| MsG0380015220.01 | MsG0580024536.01 | 0.818431 | 1.967238e-52 | 1.472355e-49 |
| MsG0380015220.01 | MsG0580024829.01 | 0.812534 | 4.039522e-51 | 2.575017e-48 |
| MsG0380015220.01 | MsG0580025439.01 | 0.821482 | 3.943766e-53 | 3.212429e-50 |
| MsG0380015220.01 | MsG0580025458.01 | 0.812539 | 4.030285e-51 | 2.569440e-48 |
| MsG0380015220.01 | MsG0580025460.01 | 0.806333 | 8.657631e-50 | 4.686511e-47 |
| MsG0380015220.01 | MsG0580025651.01 | 0.802469 | 5.529409e-49 | 2.710704e-46 |
| MsG0380015220.01 | MsG0580025922.01 | 0.822638 | 2.128149e-53 | 1.791568e-50 |
| MsG0380015220.01 | MsG0580025986.01 | 0.823367 | 1.439057e-53 | 1.236460e-50 |
| MsG0380015220.01 | MsG0580026439.01 | 0.801026 | 1.093313e-48 | 5.167665e-46 |
| MsG0380015220.01 | MsG0580026664.01 | 0.802136 | 6.474888e-49 | 3.147360e-46 |
| MsG0380015220.01 | MsG0580027891.01 | 0.847220 | 1.327489e-59 | 2.342929e-56 |
| MsG0380015220.01 | MsG0580028175.01 | 0.822459 | 2.342561e-53 | 1.961886e-50 |
| MsG0380015220.01 | MsG0580028582.01 | 0.820690 | 6.004733e-53 | 4.784242e-50 |
| MsG0380015220.01 | MsG0580029236.01 | 0.800684 | 1.284264e-48 | 6.017192e-46 |
| MsG0380015220.01 | MsG0580029283.01 | 0.812471 | 4.169723e-51 | 2.653682e-48 |
| MsG0380015220.01 | MsG0580029550.01 | 0.834958 | 2.217804e-56 | 2.673408e-53 |
| MsG0380015220.01 | MsG0580029628.01 | 0.803424 | 3.508770e-49 | 1.762637e-46 |
| MsG0380015220.01 | MsG0580029647.01 | 0.823086 | 1.673454e-53 | 1.426750e-50 |
| MsG0380015220.01 | MsG0580029736.01 | 0.802740 | 4.861597e-49 | 2.399885e-46 |
| MsG0380015220.01 | MsG0580029801.01 | 0.810802 | 9.618473e-51 | 5.854458e-48 |
| MsG0380015220.01 | MsG0580029879.01 | 0.802906 | 4.492027e-49 | 2.226848e-46 |
| MsG0380015220.01 | MsG0580029919.01 | 0.867530 | 1.279121e-65 | 4.480369e-62 |
| MsG0380015220.01 | MsG0580030003.01 | 0.812996 | 3.200309e-51 | 2.065016e-48 |
| MsG0380015220.01 | MsG0580030142.01 | 0.800409 | 1.461049e-48 | 6.798186e-46 |
| MsG0380015220.01 | MsG0680030515.01 | 0.822336 | 2.502094e-53 | 2.088239e-50 |
| MsG0380015220.01 | MsG0680030555.01 | 0.812694 | 3.726828e-51 | 2.385660e-48 |
| MsG0380015220.01 | MsG0680031000.01 | 0.805607 | 1.230437e-49 | 6.537844e-47 |
| MsG0380015220.01 | MsG0680031145.01 | 0.846815 | 1.713908e-59 | 2.986215e-56 |
| MsG0380015220.01 | MsG0680031301.01 | 0.822354 | 2.477002e-53 | 2.068426e-50 |
| MsG0380015220.01 | MsG0680031597.01 | -0.804926 | 1.708214e-49 | 8.919975e-47 |
| MsG0380015220.01 | MsG0680032075.01 | 0.818854 | 1.577314e-52 | 1.194397e-49 |
| MsG0380015220.01 | MsG0680033926.01 | 0.850539 | 1.590713e-60 | 3.126014e-57 |
| MsG0380015220.01 | MsG0680034235.01 | 0.828270 | 9.868909e-55 | 9.761058e-52 |
| MsG0380015220.01 | MsG0680034476.01 | 0.826677 | 2.379473e-54 | 2.246747e-51 |
| MsG0380015220.01 | MsG0680035306.01 | 0.802509 | 5.424437e-49 | 2.661959e-46 |
| MsG0380015220.01 | MsG0680035877.01 | 0.802603 | 5.187616e-49 | 2.551842e-46 |
| MsG0380015220.01 | MsG0780035937.01 | 0.867838 | 1.018943e-65 | 3.607879e-62 |
| MsG0380015220.01 | MsG0780036117.01 | 0.849401 | 3.311133e-60 | 6.269372e-57 |
| MsG0380015220.01 | MsG0780036183.01 | 0.801879 | 7.310356e-49 | 3.530532e-46 |
| MsG0380015220.01 | MsG0780036880.01 | 0.821403 | 4.114253e-53 | 3.343837e-50 |
| MsG0380015220.01 | MsG0780037123.01 | 0.803161 | 3.978619e-49 | 1.985195e-46 |
| MsG0380015220.01 | MsG0780037330.01 | 0.803056 | 4.181806e-49 | 2.080856e-46 |
| MsG0380015220.01 | MsG0780038907.01 | 0.812798 | 3.536342e-51 | 2.269661e-48 |
| MsG0380015220.01 | MsG0780039369.01 | 0.811483 | 6.846706e-51 | 4.243247e-48 |
| MsG0380015220.01 | MsG0780039443.01 | 0.812794 | 3.544236e-51 | 2.274516e-48 |
| MsG0380015220.01 | MsG0780039828.01 | 0.825453 | 4.650461e-54 | 4.240304e-51 |
| MsG0380015220.01 | MsG0780040070.01 | 0.800073 | 1.710426e-48 | 7.890643e-46 |
| MsG0380015220.01 | MsG0780040110.01 | 0.803275 | 3.767837e-49 | 1.885487e-46 |
| MsG0380015220.01 | MsG0780040125.01 | 0.800282 | 1.550563e-48 | 7.191530e-46 |
| MsG0380015220.01 | MsG0780040375.01 | -0.800685 | 1.283520e-48 | 6.013876e-46 |
| MsG0380015220.01 | MsG0780040424.01 | 0.802394 | 5.728238e-49 | 2.802960e-46 |
| MsG0380015220.01 | MsG0780041127.01 | 0.858797 | 6.437909e-63 | 1.663101e-59 |
| MsG0380015220.01 | MsG0780041193.01 | 0.828343 | 9.477125e-55 | 9.393454e-52 |
| MsG0380015220.01 | MsG0780041210.01 | 0.817283 | 3.573034e-52 | 2.590972e-49 |
| MsG0380015220.01 | MsG0780041258.01 | 0.849054 | 4.135421e-60 | 7.743463e-57 |
| MsG0380015220.01 | MsG0780041351.01 | 0.816765 | 4.672641e-52 | 3.340719e-49 |
| MsG0380015220.01 | MsG0780041390.01 | 0.800181 | 1.625672e-48 | 7.520249e-46 |
| MsG0380015220.01 | MsG0780041435.01 | 0.849820 | 2.530052e-60 | 4.856436e-57 |
| MsG0380015220.01 | MsG0780041482.01 | 0.844394 | 7.767904e-59 | 1.252294e-55 |
| MsG0380015220.01 | MsG0780041729.01 | -0.819937 | 8.934999e-53 | 6.972352e-50 |
| MsG0380015220.01 | MsG0780041734.01 | -0.820055 | 8.393656e-53 | 6.571933e-50 |
| MsG0380015220.01 | MsG0880042033.01 | 0.824433 | 8.091547e-54 | 7.165811e-51 |
| MsG0380015220.01 | MsG0880042324.01 | 0.831342 | 1.762443e-55 | 1.907110e-52 |
| MsG0380015220.01 | MsG0880042399.01 | -0.818793 | 1.628670e-52 | 1.231085e-49 |
| MsG0380015220.01 | MsG0880042700.01 | 0.803875 | 2.829211e-49 | 1.437876e-46 |
| MsG0380015220.01 | MsG0880042760.01 | 0.814348 | 1.612594e-51 | 1.079410e-48 |
| MsG0380015220.01 | MsG0880043028.01 | 0.801745 | 7.790823e-49 | 3.749412e-46 |
| MsG0380015220.01 | MsG0880043162.01 | 0.826754 | 2.280094e-54 | 2.157710e-51 |
| MsG0380015220.01 | MsG0880045294.01 | 0.803545 | 3.312281e-49 | 1.669161e-46 |
| MsG0380015220.01 | MsG0880045329.01 | 0.846055 | 2.761628e-59 | 4.694810e-56 |
| MsG0380015220.01 | MsG0880045460.01 | 0.807084 | 6.006557e-50 | 3.314849e-47 |
| MsG0380015220.01 | MsG0880045656.01 | 0.821283 | 4.383087e-53 | 3.550449e-50 |
| MsG0380015220.01 | MsG0880045684.01 | 0.830660 | 2.591691e-55 | 2.748400e-52 |
| MsG0380015220.01 | MsG0880046901.01 | 0.801667 | 8.082236e-49 | 3.882062e-46 |
| MsG0380015220.01 | MsG0880047212.01 | 0.800154 | 1.646269e-48 | 7.610200e-46 |
| MsG0380015220.01 | MsG0880047428.01 | 0.803568 | 3.275692e-49 | 1.651740e-46 |
| MsG0380015220.01 | MsG0880047696.01 | 0.834753 | 2.498277e-56 | 2.992412e-53 |
| MsG0380015220.01 | MsG0880047703.01 | 0.801554 | 8.524933e-49 | 4.083083e-46 |
| MsG0280006545.01 | MsG0380015220.01 | 0.817545 | 3.119462e-52 | 2.278486e-49 |
| MsG0280006679.01 | MsG0380015220.01 | 0.828152 | 1.053494e-54 | 1.038501e-51 |
| MsG0280006852.01 | MsG0380015220.01 | 0.842745 | 2.143845e-58 | 3.281483e-55 |
| MsG0280006931.01 | MsG0380015220.01 | 0.807349 | 5.278452e-50 | 2.933232e-47 |
| MsG0280007165.01 | MsG0380015220.01 | -0.823387 | 1.423790e-53 | 1.224028e-50 |
| MsG0280007440.01 | MsG0380015220.01 | 0.822081 | 2.866713e-53 | 2.374986e-50 |
| MsG0280007441.01 | MsG0380015220.01 | 0.838293 | 3.133510e-57 | 4.178059e-54 |
| MsG0280007480.01 | MsG0380015220.01 | 0.802455 | 5.565955e-49 | 2.727676e-46 |
| MsG0280007527.01 | MsG0380015220.01 | 0.801638 | 8.193697e-49 | 3.932684e-46 |
| MsG0280007531.01 | MsG0380015220.01 | 0.830767 | 2.439596e-55 | 2.595371e-52 |
| MsG0280007710.01 | MsG0380015220.01 | 0.826461 | 2.678854e-54 | 2.513902e-51 |
| MsG0280007756.01 | MsG0380015220.01 | 0.801452 | 8.944948e-49 | 4.273294e-46 |
| MsG0280007903.01 | MsG0380015220.01 | 0.808386 | 3.176681e-50 | 1.813975e-47 |
| MsG0280008234.01 | MsG0380015220.01 | 0.803954 | 2.724177e-49 | 1.387307e-46 |
| MsG0280008738.01 | MsG0380015220.01 | 0.810667 | 1.028610e-50 | 6.238479e-48 |
| MsG0280008765.01 | MsG0380015220.01 | 0.836397 | 9.587944e-57 | 1.206763e-53 |
| MsG0280009270.01 | MsG0380015220.01 | 0.807641 | 4.577945e-50 | 2.563254e-47 |
| MsG0280009441.01 | MsG0380015220.01 | 0.816599 | 5.089710e-52 | 3.622344e-49 |
| MsG0280009554.01 | MsG0380015220.01 | 0.825681 | 4.104582e-54 | 3.767333e-51 |
| MsG0280009575.01 | MsG0380015220.01 | 0.832637 | 8.438588e-56 | 9.488091e-53 |
| MsG0280010109.01 | MsG0380015220.01 | 0.811940 | 5.443757e-51 | 3.414786e-48 |
| MsG0280010158.01 | MsG0380015220.01 | 0.844240 | 8.544264e-59 | 1.370825e-55 |
| MsG0280010184.01 | MsG0380015220.01 | 0.802859 | 4.592667e-49 | 2.273991e-46 |
| MsG0280010411.01 | MsG0380015220.01 | 0.853150 | 2.890547e-61 | 6.184941e-58 |
| MsG0280010517.01 | MsG0380015220.01 | 0.800044 | 1.733356e-48 | 7.990591e-46 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015220.01.T01 | MTR_3g065330 | 87.222 | 180 | 12 | 3 | 1 | 173 | 1 | 176 | 1.30e-105 | 300 |
| MsG0380015220.01.T01 | MTR_3g065330 | 86.667 | 150 | 13 | 1 | 27 | 169 | 1 | 150 | 7.02e-89 | 258 |
| MsG0380015220.01.T01 | MTR_5g078020 | 67.133 | 143 | 38 | 2 | 27 | 162 | 1 | 141 | 4.16e-63 | 193 |
| MsG0380015220.01.T01 | MTR_1g032290 | 56.338 | 142 | 52 | 3 | 36 | 169 | 1 | 140 | 1.20e-48 | 155 |
| MsG0380015220.01.T01 | MTR_6g070920 | 59.124 | 137 | 44 | 4 | 34 | 162 | 70 | 202 | 2.66e-48 | 156 |
| MsG0380015220.01.T01 | MTR_6g070920 | 57.664 | 137 | 46 | 4 | 34 | 162 | 70 | 202 | 4.24e-47 | 153 |
| MsG0380015220.01.T01 | MTR_8g105140 | 57.037 | 135 | 48 | 3 | 36 | 162 | 1 | 133 | 1.42e-45 | 147 |
| MsG0380015220.01.T01 | MTR_8g039690 | 44.444 | 144 | 64 | 4 | 39 | 168 | 4 | 145 | 1.43e-33 | 117 |
| MsG0380015220.01.T01 | MTR_6g070920 | 61.798 | 89 | 29 | 3 | 34 | 121 | 70 | 154 | 3.68e-29 | 105 |
| MsG0380015220.01.T01 | MTR_7g084380 | 44.526 | 137 | 61 | 3 | 41 | 162 | 6 | 142 | 5.27e-29 | 107 |
| MsG0380015220.01.T01 | MTR_7g084380 | 43.220 | 118 | 52 | 3 | 60 | 162 | 21 | 138 | 3.12e-22 | 89.4 |
| MsG0380015220.01.T01 | MTR_1g078390 | 50.000 | 62 | 30 | 1 | 39 | 100 | 4 | 64 | 1.68e-14 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0380015220.01.T01 | AT1G14860 | 62.406 | 133 | 41 | 2 | 36 | 161 | 1 | 131 | 1.39e-52 | 166 |
| MsG0380015220.01.T01 | AT1G18300 | 60.584 | 137 | 45 | 3 | 34 | 162 | 38 | 173 | 1.46e-51 | 164 |
| MsG0380015220.01.T01 | AT2G01670 | 58.824 | 136 | 47 | 2 | 34 | 162 | 4 | 137 | 1.73e-51 | 163 |
| MsG0380015220.01.T01 | AT1G73540 | 55.479 | 146 | 50 | 4 | 26 | 162 | 31 | 170 | 2.66e-47 | 153 |
| MsG0380015220.01.T01 | AT3G26690 | 44.444 | 144 | 61 | 3 | 38 | 162 | 3 | 146 | 2.18e-30 | 110 |
| MsG0380015220.01.T01 | AT3G26690 | 44.444 | 144 | 61 | 3 | 38 | 162 | 3 | 146 | 2.18e-30 | 110 |
| MsG0380015220.01.T01 | AT1G12880 | 45.455 | 143 | 58 | 4 | 39 | 162 | 4 | 145 | 1.03e-29 | 108 |
| MsG0380015220.01.T01 | AT3G12600 | 43.624 | 149 | 64 | 4 | 36 | 167 | 1 | 146 | 8.48e-26 | 97.8 |
| MsG0380015220.01.T01 | AT3G12600 | 43.066 | 137 | 58 | 4 | 48 | 167 | 4 | 137 | 6.19e-22 | 87.4 |
Find 34 sgRNAs with CRISPR-Local
Find 77 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAATGAAACAGAGAGTTTA+AGG | 0.153308 | 3:-67013364 | None:intergenic |
| TTGCTTGGTGCAGGGTAAAT+TGG | 0.178727 | 3:+67014513 | MsG0380015220.01.T01:intron |
| TCTACTTGTTCAAGAGGAAT+TGG | 0.306076 | 3:+67014594 | MsG0380015220.01.T01:CDS |
| CTTTACAAAACACACAATAA+TGG | 0.312157 | 3:+67013388 | MsG0380015220.01.T01:CDS |
| TGCAGGGTAAATTGGGTAAA+TGG | 0.319017 | 3:+67014521 | MsG0380015220.01.T01:intron |
| TTCAAGAGGAATTGGAGTTC+TGG | 0.326630 | 3:+67014602 | MsG0380015220.01.T01:CDS |
| ACACACAATAATGGTTGCTT+TGG | 0.348822 | 3:+67013397 | MsG0380015220.01.T01:CDS |
| TACCATACAGATATAAGATT+GGG | 0.391619 | 3:+67013962 | MsG0380015220.01.T01:CDS |
| TGCTTGGTGCAGGGTAAATT+GGG | 0.401857 | 3:+67014514 | MsG0380015220.01.T01:intron |
| GTCACATTGGTTTCTCGTAC+TGG | 0.402078 | 3:+67013437 | MsG0380015220.01.T01:CDS |
| TCCCCAATCTTATATCTGTA+TGG | 0.410177 | 3:-67013964 | None:intergenic |
| AAAGGTCGTCGTCAAGTTGT+TGG | 0.437350 | 3:+67013482 | MsG0380015220.01.T01:CDS |
| AAAACCTTCGTCAAAGAAGA+TGG | 0.452927 | 3:+67014632 | MsG0380015220.01.T01:CDS |
| ACATATGATACTTTATATGA+TGG | 0.457732 | 3:+67014559 | MsG0380015220.01.T01:CDS |
| AAGGTCGTCGTCAAGTTGTT+GGG | 0.471306 | 3:+67013483 | MsG0380015220.01.T01:CDS |
| ATACCATACAGATATAAGAT+TGG | 0.489360 | 3:+67013961 | MsG0380015220.01.T01:CDS |
| TTGTTATAAGTTCTCAGAAA+GGG | 0.490101 | 3:+67014025 | MsG0380015220.01.T01:CDS |
| TACTAAATAACAGGGAGGCT+GGG | 0.495307 | 3:+67014162 | MsG0380015220.01.T01:intron |
| TCAAGAAAATGTTGTCACAT+TGG | 0.512517 | 3:+67013424 | MsG0380015220.01.T01:CDS |
| CTTGTTATAAGTTCTCAGAA+AGG | 0.514027 | 3:+67014024 | MsG0380015220.01.T01:CDS |
| GAGAGAACCATGGAGGAAGC+TGG | 0.519928 | 3:+67014216 | MsG0380015220.01.T01:CDS |
| GAGTTACAACGTTATAGAAA+AGG | 0.522985 | 3:+67013464 | MsG0380015220.01.T01:CDS |
| TTACTAAATAACAGGGAGGC+TGG | 0.524307 | 3:+67014161 | MsG0380015220.01.T01:intron |
| TTACCCATCTTCTTTGACGA+AGG | 0.524824 | 3:-67014636 | None:intergenic |
| ATAAGTTCTCAGAAAGGGAA+AGG | 0.542940 | 3:+67014030 | MsG0380015220.01.T01:CDS |
| GTTTCCTCTACTTGTTCAAG+AGG | 0.548107 | 3:+67014588 | MsG0380015220.01.T01:CDS |
| TAAGTTCTCAGAAAGGGAAA+GGG | 0.569652 | 3:+67014031 | MsG0380015220.01.T01:CDS |
| AATTCCTCTTGAACAAGTAG+AGG | 0.573287 | 3:-67014592 | None:intergenic |
| TCGTACACCAGCTTCCTCCA+TGG | 0.583185 | 3:-67014223 | None:intergenic |
| AAACCTTCGTCAAAGAAGAT+GGG | 0.587211 | 3:+67014633 | MsG0380015220.01.T01:CDS |
| GAAAGGGATGCTATTTCCAA+AGG | 0.599650 | 3:+67014047 | MsG0380015220.01.T01:CDS |
| AGGCAGCTTTGAGAGAACCA+TGG | 0.664114 | 3:+67014206 | MsG0380015220.01.T01:CDS |
| ACCATACAGATATAAGATTG+GGG | 0.668226 | 3:+67013963 | MsG0380015220.01.T01:CDS |
| CAGCTTTGAGAGAACCATGG+AGG | 0.726908 | 3:+67014209 | MsG0380015220.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTGAATTTAACATCAA+TGG | + | Chr3:67013897-67013916 | MsG0380015220.01.T01:intron | 15.0% |
| !!! | AAAAAATACTATTGGTTAAT+GGG | + | Chr3:67013708-67013727 | MsG0380015220.01.T01:intron | 15.0% |
| !! | ACATATGATACTTTATATGA+TGG | + | Chr3:67014559-67014578 | MsG0380015220.01.T01:CDS | 20.0% |
| !! | ATAATACTGCTAAATTATCA+CGG | + | Chr3:67013663-67013682 | MsG0380015220.01.T01:intron | 20.0% |
| !! | TCAGTTACAAAAAATACTAT+TGG | + | Chr3:67013700-67013719 | MsG0380015220.01.T01:intron | 20.0% |
| !!! | CAAAAAATACTATTGGTTAA+TGG | + | Chr3:67013707-67013726 | MsG0380015220.01.T01:intron | 20.0% |
| !!! | GGATAATTCTCTAAAAATAT+TGG | + | Chr3:67014469-67014488 | MsG0380015220.01.T01:intron | 20.0% |
| ! | AAAAATTGTGACTTTCATTG+TGG | + | Chr3:67013583-67013602 | MsG0380015220.01.T01:intron | 25.0% |
| ! | AAAATTGTGACTTTCATTGT+GGG | + | Chr3:67013584-67013603 | MsG0380015220.01.T01:intron | 25.0% |
| ! | ATAATGAAACAGAGAGTTTA+AGG | - | Chr3:67013367-67013386 | None:intergenic | 25.0% |
| ! | ATACCATACAGATATAAGAT+TGG | + | Chr3:67013961-67013980 | MsG0380015220.01.T01:CDS | 25.0% |
| ! | ATACTAATGTTACTATTGCT+TGG | + | Chr3:67014498-67014517 | MsG0380015220.01.T01:intron | 25.0% |
| ! | ATTAGATGAATCTCAAAAAG+AGG | + | Chr3:67014186-67014205 | MsG0380015220.01.T01:CDS | 25.0% |
| ! | CTTTACAAAACACACAATAA+TGG | + | Chr3:67013388-67013407 | MsG0380015220.01.T01:CDS | 25.0% |
| ! | GACTAATATCTATATACCTT+TGG | - | Chr3:67014066-67014085 | None:intergenic | 25.0% |
| ! | GTATTGCTTACTAAATAACA+GGG | + | Chr3:67014154-67014173 | MsG0380015220.01.T01:intron | 25.0% |
| ! | TACCATACAGATATAAGATT+GGG | + | Chr3:67013962-67013981 | MsG0380015220.01.T01:CDS | 25.0% |
| ! | TGTATTGCTTACTAAATAAC+AGG | + | Chr3:67014153-67014172 | MsG0380015220.01.T01:intron | 25.0% |
| ! | TTGTTATAAGTTCTCAGAAA+GGG | + | Chr3:67014025-67014044 | MsG0380015220.01.T01:CDS | 25.0% |
| !! | GAAGAATCCTACAATTTTAA+AGG | + | Chr3:67014440-67014459 | MsG0380015220.01.T01:intron | 25.0% |
| !! | TTACGGTATCTAGAATAAAT+TGG | - | Chr3:67014321-67014340 | None:intergenic | 25.0% |
| !!! | ATGAATTGTTTTGAAGAACT+CGG | + | Chr3:67014406-67014425 | MsG0380015220.01.T01:intron | 25.0% |
| !!! | ATTGGATGTTTTAGATGAAT+TGG | + | Chr3:67013996-67014015 | MsG0380015220.01.T01:CDS | 25.0% |
| !!! | CATTTAGCCTTTAAAATTGT+AGG | - | Chr3:67014450-67014469 | None:intergenic | 25.0% |
| !!! | CTACAATTTTAAAGGCTAAA+TGG | + | Chr3:67014448-67014467 | MsG0380015220.01.T01:intron | 25.0% |
| !!! | GATTCTAAAGAAGTACTAAT+TGG | + | Chr3:67013847-67013866 | MsG0380015220.01.T01:intron | 25.0% |
| !!! | TTCTCTAAAAATATTGGCTT+TGG | + | Chr3:67014475-67014494 | MsG0380015220.01.T01:intron | 25.0% |
| AAATTGTGACTTTCATTGTG+GGG | + | Chr3:67013585-67013604 | MsG0380015220.01.T01:intron | 30.0% | |
| ACCATACAGATATAAGATTG+GGG | + | Chr3:67013963-67013982 | MsG0380015220.01.T01:CDS | 30.0% | |
| CACCTCAAAATTATCAAAAG+TGG | - | Chr3:67013637-67013656 | None:intergenic | 30.0% | |
| GAGTTACAACGTTATAGAAA+AGG | + | Chr3:67013464-67013483 | MsG0380015220.01.T01:CDS | 30.0% | |
| TCAAGAAAATGTTGTCACAT+TGG | + | Chr3:67013424-67013443 | MsG0380015220.01.T01:CDS | 30.0% | |
| ! | CTTGTTATAAGTTCTCAGAA+AGG | + | Chr3:67014024-67014043 | MsG0380015220.01.T01:CDS | 30.0% |
| !! | GACCACTTTTGATAATTTTG+AGG | + | Chr3:67013632-67013651 | MsG0380015220.01.T01:intron | 30.0% |
| !!! | TGAATTGTTTTGAAGAACTC+GGG | + | Chr3:67014407-67014426 | MsG0380015220.01.T01:intron | 30.0% |
| AAAACCTTCGTCAAAGAAGA+TGG | + | Chr3:67014632-67014651 | MsG0380015220.01.T01:CDS | 35.0% | |
| AAACCTTCGTCAAAGAAGAT+GGG | + | Chr3:67014633-67014652 | MsG0380015220.01.T01:CDS | 35.0% | |
| AATTCCTCTTGAACAAGTAG+AGG | - | Chr3:67014595-67014614 | None:intergenic | 35.0% | |
| ACACACAATAATGGTTGCTT+TGG | + | Chr3:67013397-67013416 | MsG0380015220.01.T01:CDS | 35.0% | |
| ACCCAGTATCAGAAATGAAA+AGG | - | Chr3:67013525-67013544 | None:intergenic | 35.0% | |
| ATAAGTTCTCAGAAAGGGAA+AGG | + | Chr3:67014030-67014049 | MsG0380015220.01.T01:CDS | 35.0% | |
| ATTCTAGATACCGTAAGCAT+CGG | + | Chr3:67014325-67014344 | MsG0380015220.01.T01:intron | 35.0% | |
| CCAGTATCAGAAATGAAAAG+GGG | - | Chr3:67013523-67013542 | None:intergenic | 35.0% | |
| CCCAGTATCAGAAATGAAAA+GGG | - | Chr3:67013524-67013543 | None:intergenic | 35.0% | |
| GATTGGGGAGAAAAATTCAT+TGG | + | Chr3:67013978-67013997 | MsG0380015220.01.T01:CDS | 35.0% | |
| TAAGTTCTCAGAAAGGGAAA+GGG | + | Chr3:67014031-67014050 | MsG0380015220.01.T01:CDS | 35.0% | |
| TCCCCAATCTTATATCTGTA+TGG | - | Chr3:67013967-67013986 | None:intergenic | 35.0% | |
| TCTACTTGTTCAAGAGGAAT+TGG | + | Chr3:67014594-67014613 | MsG0380015220.01.T01:CDS | 35.0% | |
| TTGCTTACTAAATAACAGGG+AGG | + | Chr3:67014157-67014176 | MsG0380015220.01.T01:intron | 35.0% | |
| ! | CCCTTTTCATTTCTGATACT+GGG | + | Chr3:67013521-67013540 | MsG0380015220.01.T01:intron | 35.0% |
| !!! | ACGAATGAGTTTTGTTTGAG+TGG | - | Chr3:67013339-67013358 | None:intergenic | 35.0% |
| ATCAAATCGTCCGATGCTTA+CGG | - | Chr3:67014338-67014357 | None:intergenic | 40.0% | |
| CTCAGAGTTTGACAGAATCA+CGG | + | Chr3:67013741-67013760 | MsG0380015220.01.T01:intron | 40.0% | |
| GTTTCCTCTACTTGTTCAAG+AGG | + | Chr3:67014588-67014607 | MsG0380015220.01.T01:CDS | 40.0% | |
| TACTAAATAACAGGGAGGCT+GGG | + | Chr3:67014162-67014181 | MsG0380015220.01.T01:intron | 40.0% | |
| TGCAGGGTAAATTGGGTAAA+TGG | + | Chr3:67014521-67014540 | MsG0380015220.01.T01:intron | 40.0% | |
| TTACCCATCTTCTTTGACGA+AGG | - | Chr3:67014639-67014658 | None:intergenic | 40.0% | |
| TTACTAAATAACAGGGAGGC+TGG | + | Chr3:67014161-67014180 | MsG0380015220.01.T01:intron | 40.0% | |
| TTCAAGAGGAATTGGAGTTC+TGG | + | Chr3:67014602-67014621 | MsG0380015220.01.T01:CDS | 40.0% | |
| ! | CCCCTTTTCATTTCTGATAC+TGG | + | Chr3:67013520-67013539 | MsG0380015220.01.T01:intron | 40.0% |
| ! | TGACTTTCATTGTGGGGTTT+TGG | + | Chr3:67013591-67013610 | MsG0380015220.01.T01:intron | 40.0% |
| !! | ATGTTACTATTGCTTGGTGC+AGG | + | Chr3:67014504-67014523 | MsG0380015220.01.T01:intron | 40.0% |
| !! | GAAAGGGATGCTATTTCCAA+AGG | + | Chr3:67014047-67014066 | MsG0380015220.01.T01:CDS | 40.0% |
| !! | TGTTACTATTGCTTGGTGCA+GGG | + | Chr3:67014505-67014524 | MsG0380015220.01.T01:intron | 40.0% |
| !!! | CTTTGACGAAGGTTTTGTTC+AGG | - | Chr3:67014628-67014647 | None:intergenic | 40.0% |
| ! | AAAGGTCGTCGTCAAGTTGT+TGG | + | Chr3:67013482-67013501 | MsG0380015220.01.T01:CDS | 45.0% |
| ! | AAGGTCGTCGTCAAGTTGTT+GGG | + | Chr3:67013483-67013502 | MsG0380015220.01.T01:CDS | 45.0% |
| !! | GTCACATTGGTTTCTCGTAC+TGG | + | Chr3:67013437-67013456 | MsG0380015220.01.T01:CDS | 45.0% |
| !! | TGCTTGGTGCAGGGTAAATT+GGG | + | Chr3:67014514-67014533 | MsG0380015220.01.T01:intron | 45.0% |
| !! | TTGCTTGGTGCAGGGTAAAT+TGG | + | Chr3:67014513-67014532 | MsG0380015220.01.T01:intron | 45.0% |
| !!! | AATTTTTTTTCAAAAAAAAA+TGG | - | Chr3:67013570-67013589 | None:intergenic | 5.0% |
| !! | AGGCAGCTTTGAGAGAACCA+TGG | + | Chr3:67014206-67014225 | MsG0380015220.01.T01:CDS | 50.0% |
| !! | CAGCTTTGAGAGAACCATGG+AGG | + | Chr3:67014209-67014228 | MsG0380015220.01.T01:CDS | 50.0% |
| !! | TGGTGTACGAGGCATTGTTG+AGG | + | Chr3:67014236-67014255 | MsG0380015220.01.T01:intron | 50.0% |
| ATGGAGGAAGCTGGTGTACG+AGG | + | Chr3:67014225-67014244 | MsG0380015220.01.T01:intron | 55.0% | |
| GAGAGAACCATGGAGGAAGC+TGG | + | Chr3:67014216-67014235 | MsG0380015220.01.T01:CDS | 55.0% | |
| TCGTACACCAGCTTCCTCCA+TGG | - | Chr3:67014226-67014245 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr3 | gene | 67013329 | 67014696 | 67013329 | ID=MsG0380015220.01;Name=MsG0380015220.01 |
| Chr3 | mRNA | 67013329 | 67014696 | 67013329 | ID=MsG0380015220.01.T01;Parent=MsG0380015220.01;Name=MsG0380015220.01.T01;_AED=0.37;_eAED=0.39;_QI=0|0.66|0.5|1|1|1|4|0|173 |
| Chr3 | exon | 67013329 | 67013504 | 67013329 | ID=MsG0380015220.01.T01:exon:12;Parent=MsG0380015220.01.T01 |
| Chr3 | exon | 67013957 | 67014068 | 67013957 | ID=MsG0380015220.01.T01:exon:13;Parent=MsG0380015220.01.T01 |
| Chr3 | exon | 67014175 | 67014237 | 67014175 | ID=MsG0380015220.01.T01:exon:14;Parent=MsG0380015220.01.T01 |
| Chr3 | exon | 67014526 | 67014696 | 67014526 | ID=MsG0380015220.01.T01:exon:15;Parent=MsG0380015220.01.T01 |
| Chr3 | CDS | 67013329 | 67013504 | 67013329 | ID=MsG0380015220.01.T01:cds;Parent=MsG0380015220.01.T01 |
| Chr3 | CDS | 67013957 | 67014068 | 67013957 | ID=MsG0380015220.01.T01:cds;Parent=MsG0380015220.01.T01 |
| Chr3 | CDS | 67014175 | 67014237 | 67014175 | ID=MsG0380015220.01.T01:cds;Parent=MsG0380015220.01.T01 |
| Chr3 | CDS | 67014526 | 67014696 | 67014526 | ID=MsG0380015220.01.T01:cds;Parent=MsG0380015220.01.T01 |
| Gene Sequence |
| Protein sequence |
