Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0042620 | XP_013470094.1 | 94.922 | 768 | 32 | 2 | 1 | 762 | 1 | 767 | 0.0 | 1332 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0042620 | sp|Q28C44|C19L2_XENTR | 40.426 | 282 | 155 | 7 | 485 | 757 | 645 | 922 | 8.71e-58 | 215 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002560 | Msa0042620 | 0.814317 | 1.638797e-51 | -8.615850e-47 |
| Msa0031180 | Msa0042620 | 0.807034 | 6.154381e-50 | -8.615850e-47 |
| Msa0037120 | Msa0042620 | 0.812717 | 3.683662e-51 | -8.615850e-47 |
| Msa0042620 | Msa0045340 | 0.803886 | 2.814166e-49 | -8.615850e-47 |
| Msa0042620 | Msa0064920 | 0.810271 | 1.252222e-50 | -8.615850e-47 |
| Msa0042620 | Msa0065550 | 0.813396 | 2.614601e-51 | -8.615850e-47 |
| Msa0042620 | Msa0091780 | 0.801228 | 9.939394e-49 | -8.615850e-47 |
| Msa0042620 | Msa0124640 | 0.808458 | 3.066390e-50 | -8.615850e-47 |
| Msa0042620 | Msa0126790 | 0.804634 | 1.966190e-49 | -8.615850e-47 |
| Msa0042620 | Msa0131290 | 0.802153 | 6.420374e-49 | -8.615850e-47 |
| Msa0042620 | Msa0143850 | 0.811976 | 5.347307e-51 | -8.615850e-47 |
| Msa0042620 | Msa0171870 | 0.818703 | 1.706533e-52 | -8.615850e-47 |
| Msa0042620 | Msa0177170 | 0.813648 | 2.301493e-51 | -8.615850e-47 |
| Msa0042620 | Msa0178570 | 0.858012 | 1.103164e-62 | -8.615850e-47 |
| Msa0042620 | Msa0183420 | 0.803145 | 4.008157e-49 | -8.615850e-47 |
| Msa0042620 | Msa0202730 | 0.823931 | 1.061832e-53 | -8.615850e-47 |
| Msa0042620 | Msa0206330 | 0.831843 | 1.326776e-55 | -8.615850e-47 |
| Msa0042620 | Msa0223330 | 0.804815 | 1.802021e-49 | -8.615850e-47 |
| Msa0042620 | Msa0227190 | 0.805419 | 1.347053e-49 | -8.615850e-47 |
| Msa0042620 | Msa0237200 | 0.813959 | 1.965531e-51 | -8.615850e-47 |
| Msa0042620 | Msa0249310 | 0.852348 | 4.897531e-61 | -8.615850e-47 |
| Msa0042620 | Msa0251270 | 0.811499 | 6.789776e-51 | -8.615850e-47 |
| Msa0042620 | Msa0271790 | 0.805910 | 1.062357e-49 | -8.615850e-47 |
| Msa0042620 | Msa0274970 | 0.820186 | 7.836137e-53 | -8.615850e-47 |
| Msa0042620 | Msa0280110 | 0.825090 | 5.665488e-54 | -8.615850e-47 |
| Msa0042620 | Msa0287790 | 0.844493 | 7.308626e-59 | -8.615850e-47 |
| Msa0042620 | Msa0302570 | 0.811929 | 5.475508e-51 | -8.615850e-47 |
| Msa0042620 | Msa0308440 | 0.841755 | 3.921081e-58 | -8.615850e-47 |
| Msa0042620 | Msa0315680 | 0.817733 | 2.829554e-52 | -8.615850e-47 |
| Msa0042620 | Msa0328390 | 0.819347 | 1.218276e-52 | -8.615850e-47 |
| Msa0042620 | Msa0358400 | 0.827969 | 1.166574e-54 | -8.615850e-47 |
| Msa0042620 | Msa0362890 | 0.845118 | 4.957207e-59 | -8.615850e-47 |
| Msa0042620 | Msa0376020 | 0.810270 | 1.253005e-50 | -8.615850e-47 |
| Msa0042620 | Msa0381360 | 0.800173 | 1.631672e-48 | -8.615850e-47 |
| Msa0042620 | Msa0382370 | 0.805536 | 1.273371e-49 | -8.615850e-47 |
| Msa0042620 | Msa0395980 | 0.855238 | 7.212491e-62 | -8.615850e-47 |
| Msa0042620 | Msa0423840 | 0.811115 | 8.226596e-51 | -8.615850e-47 |
| Msa0042620 | Msa0432160 | 0.802006 | 6.884322e-49 | -8.615850e-47 |
| Msa0042620 | Msa0440510 | 0.853621 | 2.116984e-61 | -8.615850e-47 |
| Msa0042620 | Msa0468250 | 0.817977 | 2.492820e-52 | -8.615850e-47 |
| Msa0042620 | Msa0476680 | 0.800540 | 1.373821e-48 | -8.615850e-47 |
| Msa0042620 | Msa0491000 | 0.860988 | 1.406263e-63 | -8.615850e-47 |
| Msa0042620 | Msa0515710 | 0.803686 | 3.096388e-49 | -8.615850e-47 |
| Msa0042620 | Msa0516020 | 0.809605 | 1.742205e-50 | -8.615850e-47 |
| Msa0042620 | Msa0566350 | 0.803007 | 4.281501e-49 | -8.615850e-47 |
| Msa0042620 | Msa0623990 | 0.849564 | 2.981469e-60 | -8.615850e-47 |
| Msa0042620 | Msa0624060 | 0.837159 | 6.127668e-57 | -8.615850e-47 |
| Msa0042620 | Msa0624680 | 0.804084 | 2.560321e-49 | -8.615850e-47 |
| Msa0042620 | Msa0645530 | 0.827493 | 1.517575e-54 | -8.615850e-47 |
| Msa0042620 | Msa0647430 | 0.828930 | 6.835793e-55 | -8.615850e-47 |
| Msa0042620 | Msa0651560 | 0.836306 | 1.010906e-56 | -8.615850e-47 |
| Msa0042620 | Msa0676130 | 0.837023 | 6.635936e-57 | -8.615850e-47 |
| Msa0042620 | Msa0676180 | 0.831271 | 1.834413e-55 | -8.615850e-47 |
| Msa0042620 | Msa0685090 | 0.818854 | 1.577385e-52 | -8.615850e-47 |
| Msa0042620 | Msa0690310 | 0.814904 | 1.215072e-51 | -8.615850e-47 |
| Msa0042620 | Msa0756380 | 0.818068 | 2.377127e-52 | -8.615850e-47 |
| Msa0042620 | Msa0789560 | 0.811755 | 5.973597e-51 | -8.615850e-47 |
| Msa0042620 | Msa0794970 | 0.805519 | 1.283480e-49 | -8.615850e-47 |
| Msa0042620 | Msa0831100 | 0.805368 | 1.380626e-49 | -8.615850e-47 |
| Msa0042620 | Msa0834750 | 0.828241 | 1.002854e-54 | -8.615850e-47 |
| Msa0042620 | Msa0945240 | 0.800382 | 1.479389e-48 | -8.615850e-47 |
| Msa0042620 | Msa0985220 | 0.806905 | 6.553781e-50 | -8.615850e-47 |
| Msa0042620 | Msa1002960 | 0.814345 | 1.615335e-51 | -8.615850e-47 |
| Msa0042620 | Msa1034200 | 0.800635 | 1.313842e-48 | -8.615850e-47 |
| Msa0042620 | Msa1037520 | 0.804669 | 1.933151e-49 | -8.615850e-47 |
| Msa0042620 | Msa1127430 | 0.808716 | 2.701630e-50 | -8.615850e-47 |
| Msa0042620 | Msa1130400 | 0.825448 | 4.661123e-54 | -8.615850e-47 |
| Msa0042620 | Msa1170630 | 0.815802 | 7.672149e-52 | -8.615850e-47 |
| Msa0042620 | Msa1211340 | 0.824725 | 6.906774e-54 | -8.615850e-47 |
| Msa0042620 | Msa1225800 | 0.807609 | 4.649954e-50 | -8.615850e-47 |
| Msa0042620 | Msa1259640 | 0.814785 | 1.291179e-51 | -8.615850e-47 |
| Msa0042620 | Msa1329790 | 0.816855 | 4.459110e-52 | -8.615850e-47 |
| Msa0042620 | Msa1372240 | 0.862292 | 5.619817e-64 | -8.615850e-47 |
| Msa0042620 | Msa1378410 | 0.838535 | 2.714056e-57 | -8.615850e-47 |
| Msa0042620 | Msa1400120 | 0.801231 | 9.924659e-49 | -8.615850e-47 |
| Msa0042620 | Msa1437330 | 0.844998 | 5.340161e-59 | -8.615850e-47 |
| Msa0042620 | Msa1438520 | 0.802686 | 4.988010e-49 | -8.615850e-47 |
| Msa0042620 | Msa1446080 | 0.818085 | 2.356178e-52 | -8.615850e-47 |
| Msa0042620 | Msa1448490 | 0.801477 | 8.839409e-49 | -8.615850e-47 |
| Msa0042620 | Msa1450720 | 0.821691 | 3.528370e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0042620 | MtrunA17_Chr1g0208311 | 94.922 | 768 | 32 | 2 | 1 | 762 | 1 | 767 | 0.0 | 1332 |
| Msa0042620 | MtrunA17_Chr4g0071211 | 24.111 | 253 | 185 | 5 | 502 | 753 | 202 | 448 | 4.66e-14 | 75.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0042620 | AT1G56290.1 | 51.786 | 784 | 261 | 18 | 1 | 759 | 1 | 692 | 0.0 | 733 |
| Msa0042620 | AT5G56900.3 | 27.237 | 257 | 168 | 8 | 502 | 753 | 258 | 500 | 4.47e-15 | 79.3 |
| Msa0042620 | AT5G56900.1 | 27.237 | 257 | 168 | 8 | 502 | 753 | 159 | 401 | 8.12e-15 | 77.8 |
| Msa0042620 | AT5G56900.2 | 27.237 | 257 | 168 | 8 | 502 | 753 | 351 | 593 | 9.54e-15 | 78.6 |
Find 220 sgRNAs with CRISPR-Local
Find 604 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATACCACTTCTTCTTTC+TGG | 0.127155 | 1_1:-73518373 | None:intergenic |
| CATTGGTAATATGCTGATTT+TGG | 0.157883 | 1_1:-73525429 | None:intergenic |
| AATGCAGAACAAGCAGTTTA+AGG | 0.165236 | 1_1:+73522406 | Msa0042620:CDS |
| TAAATCTAGAAAATGCTTTC+TGG | 0.175819 | 1_1:+73518088 | Msa0042620:exon |
| GATAATGAATCTTGCACTTT+AGG | 0.203429 | 1_1:-73521444 | None:intergenic |
| AGATGGCAGTGATGGTTCTT+TGG | 0.217013 | 1_1:+73518542 | Msa0042620:CDS |
| AAAAGAGGCAACGTTCTTTC+TGG | 0.231869 | 1_1:-73522553 | None:intergenic |
| CTTTAGGTGCTTTCATTTCA+TGG | 0.232601 | 1_1:-73521428 | None:intergenic |
| CTATCCAACGGGATTCTAAA+AGG | 0.246272 | 1_1:+73521232 | Msa0042620:CDS |
| CCAAATTCTACATGAAAATA+AGG | 0.267046 | 1_1:-73525023 | None:intergenic |
| TTCTATCGTCCTCCCTTGTT+GGG | 0.271017 | 1_1:+73520641 | Msa0042620:CDS |
| AGCCTCTTTAGCAACATCTT+TGG | 0.273963 | 1_1:-73523349 | None:intergenic |
| GTCAAAATGATCCCAGTCTT+TGG | 0.291825 | 1_1:-73525210 | None:intergenic |
| GCCTCTTTAGCAACATCTTT+GGG | 0.302529 | 1_1:-73523348 | None:intergenic |
| ATCAGATATTAGGAGGAAAA+AGG | 0.309597 | 1_1:+73518293 | Msa0042620:CDS |
| ACAAGATGCATCGGCCGATT+TGG | 0.310653 | 1_1:-73522587 | None:intergenic |
| CGGCGCTACTGCCGGAGAAT+AGG | 0.311731 | 1_1:-73517543 | None:intergenic |
| TAACTCCGATGGCTCTGTTT+TGG | 0.313770 | 1_1:+73521596 | Msa0042620:CDS |
| CTTCTATCGTCCTCCCTTGT+TGG | 0.323231 | 1_1:+73520640 | Msa0042620:CDS |
| TGAAATAGTTGCTATGTAAT+AGG | 0.326984 | 1_1:+73525450 | Msa0042620:three_prime_UTR |
| TGGTACTTCGTGGTCGTATG+AGG | 0.340347 | 1_1:-73517701 | None:intergenic |
| CGATATTGCAAGAAAAGAAA+TGG | 0.349250 | 1_1:+73518638 | Msa0042620:CDS |
| ACTCGTATCAATGAGTCTTT+TGG | 0.351937 | 1_1:-73524964 | None:intergenic |
| GCCAGAGGAGGTTCCGGTTA+AGG | 0.353909 | 1_1:+73518725 | Msa0042620:CDS |
| CTGACCTTCTTAAAGTATAA+AGG | 0.363032 | 1_1:-73523372 | None:intergenic |
| CAGCCTGGTAGGAGGGGAAG+AGG | 0.363455 | 1_1:-73517509 | None:intergenic |
| AAATCTAGAAAATGCTTTCT+GGG | 0.367835 | 1_1:+73518089 | Msa0042620:exon |
| TTAAATAAATTTGCTAATGA+TGG | 0.373787 | 1_1:+73521537 | Msa0042620:CDS |
| GATGGCAGTGATGGTTCTTT+GGG | 0.376486 | 1_1:+73518543 | Msa0042620:CDS |
| ATTTGTTGGAGGCTGCAAAT+TGG | 0.377228 | 1_1:-73517721 | None:intergenic |
| TTACATAGCAACTATTTCAT+TGG | 0.378411 | 1_1:-73525446 | None:intergenic |
| AAGGAGTTTAAGAGTAGTCT+TGG | 0.378970 | 1_1:+73525083 | Msa0042620:CDS |
| TGATTGATTGATTACCTTAG+TGG | 0.383881 | 1_1:-73517752 | None:intergenic |
| GGCGCTACTGCCGGAGAATA+GGG | 0.390340 | 1_1:-73517542 | None:intergenic |
| CTTCCATCATCCTTTAGATA+AGG | 0.393080 | 1_1:-73520571 | None:intergenic |
| CATTAGAGGCATGCTGCATT+TGG | 0.401828 | 1_1:+73525115 | Msa0042620:CDS |
| AGAAATTAAACTCACGTGAA+TGG | 0.401995 | 1_1:-73522687 | None:intergenic |
| CTAAGACATACCTCCTTAAC+CGG | 0.402163 | 1_1:-73518738 | None:intergenic |
| CTTGGGTTGAATGTCATTAG+AGG | 0.406348 | 1_1:+73525101 | Msa0042620:CDS |
| TAGTGGTAGTTTCAATTTGT+TGG | 0.408991 | 1_1:-73517735 | None:intergenic |
| ACGGAGAGAAAACTAATAGA+AGG | 0.409896 | 1_1:-73517622 | None:intergenic |
| CAGTGGCAGCCCGTGGTGCC+TGG | 0.410325 | 1_1:+73522647 | Msa0042620:CDS |
| CACCCTCAGCTACAGCAAAC+TGG | 0.415469 | 1_1:-73521485 | None:intergenic |
| GATATTGCCAGAGGAGGTTC+CGG | 0.417230 | 1_1:+73518719 | Msa0042620:CDS |
| AAAGAGGCAACGTTCTTTCT+GGG | 0.420692 | 1_1:-73522552 | None:intergenic |
| AAGTGCAAGATTCATTATCT+TGG | 0.421374 | 1_1:+73521448 | Msa0042620:CDS |
| CAAAAGTCATGTTCAAAAGA+TGG | 0.422563 | 1_1:+73518582 | Msa0042620:CDS |
| GGAGAAAGGTGGGGTTCTCT+TGG | 0.424757 | 1_1:+73521093 | Msa0042620:CDS |
| TCCTTTGTTTCTGAAACAGC+TGG | 0.426347 | 1_1:-73518696 | None:intergenic |
| TAAAGCAGCTGCCCCAGCTC+GGG | 0.427184 | 1_1:+73521140 | Msa0042620:CDS |
| CCGGGCTTTATGAGAATCAT+AGG | 0.428496 | 1_1:+73525401 | Msa0042620:three_prime_UTR |
| GCATGGCCTTAGCTGCCAAC+TGG | 0.432433 | 1_1:-73521704 | None:intergenic |
| TCCTTAACCGGAACCTCCTC+TGG | 0.432540 | 1_1:-73518726 | None:intergenic |
| ACAGGTTGTGGGAGAAAGGT+GGG | 0.432847 | 1_1:+73521083 | Msa0042620:intron |
| TGGATAGGCTTATCAGAATC+TGG | 0.438375 | 1_1:-73521216 | None:intergenic |
| AACTAGCATCTCTTGGCAAT+TGG | 0.448076 | 1_1:-73525341 | None:intergenic |
| TCTTCTTCAGATGGCAGTGA+TGG | 0.448835 | 1_1:+73518534 | Msa0042620:CDS |
| GAAATTAAACTCACGTGAAT+GGG | 0.449576 | 1_1:-73522686 | None:intergenic |
| GGCTCCTTTATACTTTAAGA+AGG | 0.451038 | 1_1:+73523368 | Msa0042620:CDS |
| TCGTCCTCCCTTGTTGGGGA+TGG | 0.451524 | 1_1:+73520646 | Msa0042620:CDS |
| TTAGCAACATCTTTGGGTAC+AGG | 0.452375 | 1_1:-73523342 | None:intergenic |
| ATGAAAATAAGGAAAGTCCT+TGG | 0.453332 | 1_1:-73525012 | None:intergenic |
| AGAAGGGTGTAGAATGGTAG+TGG | 0.454953 | 1_1:-73517605 | None:intergenic |
| TGCAAACCAGTTGGCAGCTA+AGG | 0.457599 | 1_1:+73521698 | Msa0042620:CDS |
| AGATAAGGATTCAATTCCTT+AGG | 0.459784 | 1_1:-73520556 | None:intergenic |
| TTCTGATAAGCCTATCCAAC+GGG | 0.465145 | 1_1:+73521221 | Msa0042620:CDS |
| ACCCAAAGATGTTGCTAAAG+AGG | 0.465690 | 1_1:+73523347 | Msa0042620:CDS |
| ATGTACAGGTTGTGGGAGAA+AGG | 0.465753 | 1_1:+73521079 | Msa0042620:intron |
| TGCAAGAAAAGAAATGGGAT+TGG | 0.466865 | 1_1:+73518644 | Msa0042620:CDS |
| AACTCTACAAACCTGGTCAC+GGG | 0.470379 | 1_1:-73518125 | None:intergenic |
| TGGTAGTTTCAATTTGTTGG+AGG | 0.472309 | 1_1:-73517732 | None:intergenic |
| AGGGAAGTTCTAGTTCTAGA+AGG | 0.477096 | 1_1:+73522011 | Msa0042620:CDS |
| TGAAGAAGCTGATAGACTAA+TGG | 0.482397 | 1_1:+73521749 | Msa0042620:CDS |
| TTCCCTCTTCCCCTCCTACC+AGG | 0.484449 | 1_1:+73517506 | Msa0042620:five_prime_UTR |
| GAAAAGAAATGGGATTGGAT+TGG | 0.486728 | 1_1:+73518649 | Msa0042620:CDS |
| CTAGGTACAAGATGGGAACT+TGG | 0.486887 | 1_1:+73518239 | Msa0042620:intron |
| TGAAAATAAGGAAAGTCCTT+GGG | 0.489950 | 1_1:-73525011 | None:intergenic |
| GGTTGTGGCGGCGCTACTGC+CGG | 0.490345 | 1_1:-73517551 | None:intergenic |
| TCACCAGGTATGTCTACATC+TGG | 0.490912 | 1_1:-73521645 | None:intergenic |
| TTTGTCTAGAAAATCCAAAT+CGG | 0.491417 | 1_1:+73522573 | Msa0042620:CDS |
| GGCTGCAAATTGGTACTTCG+TGG | 0.491562 | 1_1:-73517711 | None:intergenic |
| AATCCTTATCTAAAGGATGA+TGG | 0.493135 | 1_1:+73520568 | Msa0042620:CDS |
| CTAAAGCAGCTGCCCCAGCT+CGG | 0.495294 | 1_1:+73521139 | Msa0042620:CDS |
| TACAGGTTGTGGGAGAAAGG+TGG | 0.496438 | 1_1:+73521082 | Msa0042620:intron |
| CATGTAGATGAGCCCGAGCT+GGG | 0.496495 | 1_1:-73521152 | None:intergenic |
| AAAGAAGGAAGGAGAGGTTG+TGG | 0.498892 | 1_1:-73517566 | None:intergenic |
| AGGAGTTTAAGAGTAGTCTT+GGG | 0.500080 | 1_1:+73525084 | Msa0042620:CDS |
| CAATATAACTCGTTTATGCC+CGG | 0.500626 | 1_1:+73525382 | Msa0042620:three_prime_UTR |
| ACGGTCAAGGAGTGGTAAAA+AGG | 0.500765 | 1_1:+73518488 | Msa0042620:CDS |
| GAAGTGGTTACGCAGAAGAA+AGG | 0.501484 | 1_1:+73520590 | Msa0042620:CDS |
| GATATTGCAAGAAAAGAAAT+GGG | 0.506087 | 1_1:+73518639 | Msa0042620:CDS |
| AAAAGTCATGTTCAAAAGAT+GGG | 0.506136 | 1_1:+73518583 | Msa0042620:CDS |
| GGAATTGAATCCTTATCTAA+AGG | 0.506348 | 1_1:+73520561 | Msa0042620:CDS |
| GAAATTCATTCCCCGTGACC+AGG | 0.508309 | 1_1:+73518114 | Msa0042620:CDS |
| TATGGATATGTACAGGTTGT+GGG | 0.508376 | 1_1:+73521072 | Msa0042620:intron |
| TGCTTAAGTCTGAAAGTAAG+AGG | 0.510249 | 1_1:+73518673 | Msa0042620:CDS |
| TCTTGAAACTGTGATGGGAT+TGG | 0.510705 | 1_1:+73523284 | Msa0042620:CDS |
| TCCTTTCAAACGAAGTTGCA+TGG | 0.513085 | 1_1:-73521721 | None:intergenic |
| GCATGTAGATGAGCCCGAGC+TGG | 0.513263 | 1_1:-73521153 | None:intergenic |
| GTGTAGAATGGTAGTGGAGT+GGG | 0.514840 | 1_1:-73517599 | None:intergenic |
| TACAAGATGGGAACTTGGAT+AGG | 0.515554 | 1_1:+73518244 | Msa0042620:CDS |
| TGCCGGAGAATAGGGACGGT+GGG | 0.515824 | 1_1:-73517534 | None:intergenic |
| GGTACTTCGTGGTCGTATGA+GGG | 0.516203 | 1_1:-73517700 | None:intergenic |
| GCCATGCAACTTCGTTTGAA+AGG | 0.516217 | 1_1:+73521720 | Msa0042620:CDS |
| TCCTCCCTTGTTGGGGATGG+AGG | 0.516820 | 1_1:+73520649 | Msa0042620:CDS |
| GCCTTCGTTTCTTATCATCC+CGG | 0.519609 | 1_1:-73518440 | None:intergenic |
| CCATGTTATTGATGATGAAA+AGG | 0.522343 | 1_1:+73525064 | Msa0042620:CDS |
| GTAGAATTTGGTTTAAACAA+AGG | 0.523368 | 1_1:+73525035 | Msa0042620:CDS |
| TGTATATACTAGGTACAAGA+TGG | 0.525351 | 1_1:+73518231 | Msa0042620:intron |
| GTGGAGAAACTAGCATCTCT+TGG | 0.526001 | 1_1:-73525348 | None:intergenic |
| GCCAGCTGTTTCAGAAACAA+AGG | 0.526710 | 1_1:+73518695 | Msa0042620:CDS |
| ATATCTTCTGAGCAGAAGAA+AGG | 0.527325 | 1_1:+73522347 | Msa0042620:CDS |
| CCTATGATTCTCATAAAGCC+CGG | 0.528167 | 1_1:-73525401 | None:intergenic |
| GCAGTTTAAGGTTTATACTC+AGG | 0.528525 | 1_1:+73522418 | Msa0042620:CDS |
| ACGTCAAAGGTACGAGAAAG+TGG | 0.530885 | 1_1:+73525157 | Msa0042620:CDS |
| TATCCAACGGGATTCTAAAA+GGG | 0.536857 | 1_1:+73521233 | Msa0042620:CDS |
| CAACTGAAAGTGAAAGCGAC+CGG | 0.538228 | 1_1:+73518421 | Msa0042620:CDS |
| GTCAAAGAAGGCAAATCCTA+AGG | 0.538930 | 1_1:+73520540 | Msa0042620:intron |
| GAAGACTCTTCTTCTTCAGA+TGG | 0.541678 | 1_1:+73518525 | Msa0042620:CDS |
| GCAGCAACGGAGGCATTGCA+TGG | 0.542294 | 1_1:+73523308 | Msa0042620:CDS |
| CAGCAATGACCAGGCACCAC+GGG | 0.542710 | 1_1:-73522656 | None:intergenic |
| CCGGAGAATAGGGACGGTGG+GGG | 0.543170 | 1_1:-73517532 | None:intergenic |
| TGATGGGATTGGCGCAGCAA+CGG | 0.543497 | 1_1:+73523295 | Msa0042620:CDS |
| ACAAATTGAAACTACCACTA+AGG | 0.544779 | 1_1:+73517738 | Msa0042620:five_prime_UTR |
| ACTAATAGAAGGGTGTAGAA+TGG | 0.546084 | 1_1:-73517611 | None:intergenic |
| CTCATTGATACGAGTCAGAA+GGG | 0.552831 | 1_1:+73524972 | Msa0042620:CDS |
| AATATAACTCGTTTATGCCC+GGG | 0.554488 | 1_1:+73525383 | Msa0042620:three_prime_UTR |
| AGGCATGCTGCATTTGGCTG+AGG | 0.559862 | 1_1:+73525121 | Msa0042620:CDS |
| TAACTCTACAAACCTGGTCA+CGG | 0.560136 | 1_1:-73518126 | None:intergenic |
| AGCCTGGTAGGAGGGGAAGA+GGG | 0.561409 | 1_1:-73517508 | None:intergenic |
| TATCTAAAGGATGATGGAAG+TGG | 0.562789 | 1_1:+73520574 | Msa0042620:CDS |
| TCTATCGTCCTCCCTTGTTG+GGG | 0.563715 | 1_1:+73520642 | Msa0042620:CDS |
| GAAATTAGATCAAGAACTGA+GGG | 0.565433 | 1_1:+73521992 | Msa0042620:CDS |
| GTGGGCTGCGAAAGGAAAGA+AGG | 0.566263 | 1_1:-73517581 | None:intergenic |
| TGATAAGAAACGAAGGCGGA+AGG | 0.566477 | 1_1:+73518446 | Msa0042620:CDS |
| TATGCGTGAGTTAGTTAGCA+AGG | 0.567223 | 1_1:+73521566 | Msa0042620:CDS |
| GTATGAGGGCGGAGGCGCAA+TGG | 0.569010 | 1_1:-73517686 | None:intergenic |
| GATGAATATGACTTTGAGAC+TGG | 0.570613 | 1_1:+73522446 | Msa0042620:CDS |
| AAGTGGTTACGCAGAAGAAA+GGG | 0.572537 | 1_1:+73520591 | Msa0042620:CDS |
| ATGGTTCTTTGGGTCGCCAA+CGG | 0.574425 | 1_1:+73518553 | Msa0042620:CDS |
| AAGATATGTGAAATTTGCAA+TGG | 0.574800 | 1_1:-73522615 | None:intergenic |
| CTCTCCGTCTCGAAAACGCA+AGG | 0.577826 | 1_1:+73517637 | Msa0042620:five_prime_UTR |
| TCGTGGTCGTATGAGGGCGG+AGG | 0.578997 | 1_1:-73517694 | None:intergenic |
| ACAAGATGGGAACTTGGATA+GGG | 0.579294 | 1_1:+73518245 | Msa0042620:CDS |
| TTCATTTCATGGTGCCGAGG+AGG | 0.579484 | 1_1:-73521417 | None:intergenic |
| TTGCTCCTCCATCCCCAACA+AGG | 0.579676 | 1_1:-73520654 | None:intergenic |
| AGTGTTTCTTGAAACTGTGA+TGG | 0.581708 | 1_1:+73523278 | Msa0042620:CDS |
| AACTGAAAGTGAAAGCGACC+GGG | 0.581958 | 1_1:+73518422 | Msa0042620:CDS |
| CTATAAGAAGCAGACAAAGA+GGG | 0.582737 | 1_1:+73521175 | Msa0042620:CDS |
| AAGCCAGTTTGCTGTAGCTG+AGG | 0.582994 | 1_1:+73521482 | Msa0042620:CDS |
| TTGGGGATGGAGGAGCAAGT+TGG | 0.583549 | 1_1:+73520659 | Msa0042620:CDS |
| AGAAAAGAGATGGACGGTCA+AGG | 0.584062 | 1_1:+73518475 | Msa0042620:CDS |
| TGGGATTGGCGCAGCAACGG+AGG | 0.587679 | 1_1:+73523298 | Msa0042620:CDS |
| TTGGTGGGCAGGAAGAAGCA+AGG | 0.587839 | 1_1:+73521936 | Msa0042620:intron |
| GCCGGAGAATAGGGACGGTG+GGG | 0.591368 | 1_1:-73517533 | None:intergenic |
| TTATATTGTTACATTACATG+TGG | 0.592631 | 1_1:-73525367 | None:intergenic |
| TTGATGAAGCAGAAGATGAG+TGG | 0.593008 | 1_1:+73524928 | Msa0042620:CDS |
| ACTCATTGATACGAGTCAGA+AGG | 0.593762 | 1_1:+73524971 | Msa0042620:CDS |
| GGTGTAGAATGGTAGTGGAG+TGG | 0.594123 | 1_1:-73517600 | None:intergenic |
| CTATGATTCTCATAAAGCCC+GGG | 0.596074 | 1_1:-73525400 | None:intergenic |
| ACTTTCCAAAACAGAGCCAT+CGG | 0.600722 | 1_1:-73521601 | None:intergenic |
| TGGTGGGCAGGAAGAAGCAA+GGG | 0.600781 | 1_1:+73521937 | Msa0042620:intron |
| GCTATAAGAAGCAGACAAAG+AGG | 0.602039 | 1_1:+73521174 | Msa0042620:CDS |
| AGCCAGTTTGCTGTAGCTGA+GGG | 0.602459 | 1_1:+73521483 | Msa0042620:CDS |
| AGCGGAGAGAACAAGATCAA+AGG | 0.603131 | 1_1:+73518606 | Msa0042620:CDS |
| AACGGTGGATGATAATGTGT+GGG | 0.603348 | 1_1:+73523194 | Msa0042620:CDS |
| AAGGGTCCAGAAAGAAGAAG+TGG | 0.604306 | 1_1:+73518367 | Msa0042620:CDS |
| GATAAGAAACGAAGGCGGAA+GGG | 0.605462 | 1_1:+73518447 | Msa0042620:CDS |
| TGCTCCTCCATCCCCAACAA+GGG | 0.605665 | 1_1:-73520653 | None:intergenic |
| GTAGTGGAGTGGGCTGCGAA+AGG | 0.608639 | 1_1:-73517589 | None:intergenic |
| CAAGAGCAAGCAGCTCGAGA+AGG | 0.610525 | 1_1:+73520706 | Msa0042620:CDS |
| TGAAATTAGATCAAGAACTG+AGG | 0.611462 | 1_1:+73521991 | Msa0042620:CDS |
| CGGAGAGAAAACTAATAGAA+GGG | 0.611734 | 1_1:-73517621 | None:intergenic |
| TCATGTTCAAAAGATGGGAG+CGG | 0.612238 | 1_1:+73518588 | Msa0042620:CDS |
| ATGGACACAACAAGATGCAT+CGG | 0.612414 | 1_1:-73522596 | None:intergenic |
| TAACATGAGTGCAAACCAGT+TGG | 0.614285 | 1_1:+73521689 | Msa0042620:CDS |
| TCTCCAGATGTAGACATACC+TGG | 0.614683 | 1_1:+73521642 | Msa0042620:CDS |
| CTGCCGGAGAATAGGGACGG+TGG | 0.618206 | 1_1:-73517535 | None:intergenic |
| AATCTAGAAAATGCTTTCTG+GGG | 0.620178 | 1_1:+73518090 | Msa0042620:exon |
| ATTCAAGGTATGCTATGCAG+AGG | 0.622462 | 1_1:+73522324 | Msa0042620:intron |
| GCTTTCATTTCATGGTGCCG+AGG | 0.628763 | 1_1:-73521420 | None:intergenic |
| CATATCTTATGTTGCCACAG+TGG | 0.629694 | 1_1:+73522630 | Msa0042620:CDS |
| GGCACCACGGGCTGCCACTG+TGG | 0.630244 | 1_1:-73522644 | None:intergenic |
| GTATATACTAGGTACAAGAT+GGG | 0.630548 | 1_1:+73518232 | Msa0042620:intron |
| AGAGGAGGTTCCGGTTAAGG+AGG | 0.634828 | 1_1:+73518728 | Msa0042620:CDS |
| GTGTTTCTTGAAACTGTGAT+GGG | 0.635016 | 1_1:+73523279 | Msa0042620:CDS |
| GTTTAAGGTTTATACTCAGG+CGG | 0.637491 | 1_1:+73522421 | Msa0042620:CDS |
| TTTACGCAACTCAATTCCCA+AGG | 0.639849 | 1_1:+73524995 | Msa0042620:CDS |
| TATAAGAAGCAGACAAAGAG+GGG | 0.639918 | 1_1:+73521176 | Msa0042620:CDS |
| ATGTAGATGAGCCCGAGCTG+GGG | 0.644283 | 1_1:-73521151 | None:intergenic |
| GTTGCCACAGTGGCAGCCCG+TGG | 0.646274 | 1_1:+73522640 | Msa0042620:CDS |
| TCCTCCATCCCCAACAAGGG+AGG | 0.647544 | 1_1:-73520650 | None:intergenic |
| ACTCTACAAACCTGGTCACG+GGG | 0.649268 | 1_1:-73518124 | None:intergenic |
| GCATGAATCAGCTACAAGAA+CGG | 0.655856 | 1_1:+73523176 | Msa0042620:intron |
| GAAAGGGATGGAGTTAACGT+TGG | 0.656584 | 1_1:+73520607 | Msa0042620:CDS |
| AAAGGAGATATTGCCAGAGG+AGG | 0.656762 | 1_1:+73518713 | Msa0042620:CDS |
| AGAGATGGACGGTCAAGGAG+TGG | 0.659421 | 1_1:+73518480 | Msa0042620:CDS |
| AAGGAGAGTAGTAACTCCGA+TGG | 0.660069 | 1_1:+73521585 | Msa0042620:CDS |
| GGTAAAATACAGCAATGACC+AGG | 0.660836 | 1_1:-73522665 | None:intergenic |
| ATTCTGATAAGCCTATCCAA+CGG | 0.661452 | 1_1:+73521220 | Msa0042620:CDS |
| GAAAGGAAAGAAGGAAGGAG+AGG | 0.661803 | 1_1:-73517572 | None:intergenic |
| CAGGTTGTGGGAGAAAGGTG+GGG | 0.662023 | 1_1:+73521084 | Msa0042620:intron |
| GGTTACGCAGAAGAAAGGGA+TGG | 0.664387 | 1_1:+73520595 | Msa0042620:CDS |
| CTACTGCCGGAGAATAGGGA+CGG | 0.665267 | 1_1:-73517538 | None:intergenic |
| TTCTGAGCAGAAGAAAGGAG+AGG | 0.665761 | 1_1:+73522352 | Msa0042620:CDS |
| GCTGCGAAAGGAAAGAAGGA+AGG | 0.667850 | 1_1:-73517577 | None:intergenic |
| AAGACATGTATAGACGTCAA+AGG | 0.668527 | 1_1:+73525144 | Msa0042620:CDS |
| GAAGGAAGGAGAGGTTGTGG+CGG | 0.671872 | 1_1:-73517563 | None:intergenic |
| TGGCAGTTCACGCAACAGAG+TGG | 0.672423 | 1_1:-73517666 | None:intergenic |
| ACAGCAATGACCAGGCACCA+CGG | 0.673584 | 1_1:-73522657 | None:intergenic |
| ACTTCGTGGTCGTATGAGGG+CGG | 0.680013 | 1_1:-73517697 | None:intergenic |
| AACAAAGGAGATATTGCCAG+AGG | 0.685554 | 1_1:+73518710 | Msa0042620:CDS |
| TGAATCAGCTACAAGAACGG+TGG | 0.687115 | 1_1:+73523179 | Msa0042620:CDS |
| ACCGGGATGATAAGAAACGA+AGG | 0.693258 | 1_1:+73518439 | Msa0042620:CDS |
| AGAAGGACGAAGCTGCCAAG+AGG | 0.694798 | 1_1:+73520723 | Msa0042620:CDS |
| AAGAGTAGAAAGAAGCAAGG+AGG | 0.698813 | 1_1:+73522479 | Msa0042620:CDS |
| GAACGGTGGATGATAATGTG+TGG | 0.714664 | 1_1:+73523193 | Msa0042620:CDS |
| ACGGTGGATGATAATGTGTG+GGG | 0.723750 | 1_1:+73523195 | Msa0042620:CDS |
| TCAAAGGTACGAGAAAGTGG+AGG | 0.744298 | 1_1:+73525160 | Msa0042620:CDS |
| GGGATGATAAGAAACGAAGG+CGG | 0.769963 | 1_1:+73518442 | Msa0042620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTAAAAAATTGAACA+TGG | - | chr1_1:73517981-73518000 | None:intergenic | 10.0% |
| !!! | TATTTTAAAGATAGATAAAA+AGG | + | chr1_1:73518908-73518927 | Msa0042620:intron | 10.0% |
| !!! | ATTTTAAAGATAGATAAAAA+GGG | + | chr1_1:73518909-73518928 | Msa0042620:intron | 10.0% |
| !!! | TATTTTCAAAAAAAACAATA+CGG | - | chr1_1:73520048-73520067 | None:intergenic | 10.0% |
| !!! | AATCAAAATACTATTTCTTA+GGG | + | chr1_1:73517770-73517789 | Msa0042620:intron | 15.0% |
| !! | AACACGAATAAATTAATTAA+TGG | - | chr1_1:73518043-73518062 | None:intergenic | 15.0% |
| !! | AAAGAAAAAAATCAGATATT+AGG | + | chr1_1:73518283-73518302 | Msa0042620:CDS | 15.0% |
| !! | TGTCTTATATTATTTATGTT+TGG | + | chr1_1:73520251-73520270 | Msa0042620:intron | 15.0% |
| !!! | TTAAATAAATTTGCTAATGA+TGG | + | chr1_1:73521537-73521556 | Msa0042620:CDS | 15.0% |
| !! | ATATAATTGATTAAGTTCTT+TGG | + | chr1_1:73522790-73522809 | Msa0042620:intron | 15.0% |
| !! | TAATTTAACCAATTTCAATA+AGG | - | chr1_1:73522873-73522892 | None:intergenic | 15.0% |
| !!! | TAAGACATTTTTTGAAATTT+CGG | - | chr1_1:73523227-73523246 | None:intergenic | 15.0% |
| !! | ATATATTATTATGAGAAATG+CGG | + | chr1_1:73523631-73523650 | Msa0042620:intron | 15.0% |
| !!! | ACATCTAGTTTTTTTTTTTT+GGG | - | chr1_1:73524349-73524368 | None:intergenic | 15.0% |
| !!! | CAATCAAAATACTATTTCTT+AGG | + | chr1_1:73517769-73517788 | Msa0042620:intron | 20.0% |
| !! | AATGAAGTGATAATACAATT+AGG | - | chr1_1:73518006-73518025 | None:intergenic | 20.0% |
| !!! | ATCTGATTTTTTTCTTTCTT+TGG | - | chr1_1:73518280-73518299 | None:intergenic | 20.0% |
| !! | AGCTTGATAAGATAAAAAAA+GGG | + | chr1_1:73518349-73518368 | Msa0042620:CDS | 20.0% |
| !!! | ACTGTATTTAAGTTAGATTT+AGG | + | chr1_1:73519064-73519083 | Msa0042620:intron | 20.0% |
| !!! | CTGTATTTAAGTTAGATTTA+GGG | + | chr1_1:73519065-73519084 | Msa0042620:intron | 20.0% |
| !!! | AAGAAATTTTATCTTAGGAA+TGG | - | chr1_1:73519190-73519209 | None:intergenic | 20.0% |
| !!! | AAAGGAAGAAATTTTATCTT+AGG | - | chr1_1:73519195-73519214 | None:intergenic | 20.0% |
| !!! | AATTTTCCTTTAATATTGAG+TGG | - | chr1_1:73519372-73519391 | None:intergenic | 20.0% |
| !! | TATTGGATTATTCTATCATA+TGG | - | chr1_1:73519665-73519684 | None:intergenic | 20.0% |
| !!! | GTTCTTTTAACATGTTATAT+TGG | - | chr1_1:73520445-73520464 | None:intergenic | 20.0% |
| !!! | TTCTTTTGACATGTTATATT+GGG | - | chr1_1:73520495-73520514 | None:intergenic | 20.0% |
| !!! | CAGAATAATAACGTTTTTAT+AGG | - | chr1_1:73520794-73520813 | None:intergenic | 20.0% |
| !! | AAAAACGTTATTATTCTGTT+AGG | + | chr1_1:73520796-73520815 | Msa0042620:intron | 20.0% |
| !! | TAGAATGAAATAATATCAAC+AGG | - | chr1_1:73520971-73520990 | None:intergenic | 20.0% |
| !! | ATTGAACGTTAATTAAAGAA+CGG | - | chr1_1:73521032-73521051 | None:intergenic | 20.0% |
| !! | ACTTAATAAAAATAATCACG+AGG | - | chr1_1:73521894-73521913 | None:intergenic | 20.0% |
| !! | ATACATGAAACAAATATGTA+GGG | - | chr1_1:73522088-73522107 | None:intergenic | 20.0% |
| !! | AATACATGAAACAAATATGT+AGG | - | chr1_1:73522089-73522108 | None:intergenic | 20.0% |
| !! | CATATTTGTTTCATGTATTT+CGG | + | chr1_1:73522090-73522109 | Msa0042620:intron | 20.0% |
| !!! | ATCTTTTTTTGGATATTCTT+GGG | - | chr1_1:73522512-73522531 | None:intergenic | 20.0% |
| !! | AAAAAAAGATGAATGCAAAT+CGG | + | chr1_1:73522522-73522541 | Msa0042620:CDS | 20.0% |
| !! | ACTTAATCAATTATATTGCA+GGG | - | chr1_1:73522786-73522805 | None:intergenic | 20.0% |
| !! | AACTTAATCAATTATATTGC+AGG | - | chr1_1:73522787-73522806 | None:intergenic | 20.0% |
| !! | ATTTGATACCTTATTGAAAT+TGG | + | chr1_1:73522862-73522881 | Msa0042620:intron | 20.0% |
| !! | TTGAAATTGGTTAAATTACA+TGG | + | chr1_1:73522875-73522894 | Msa0042620:intron | 20.0% |
| !! | AGTAACCTTAAGATATATAA+TGG | + | chr1_1:73523038-73523057 | Msa0042620:intron | 20.0% |
| !! | ATTCACCATTATATATCTTA+AGG | - | chr1_1:73523046-73523065 | None:intergenic | 20.0% |
| !!! | ATGGTGAATTAAATTTTAAG+TGG | + | chr1_1:73523057-73523076 | Msa0042620:intron | 20.0% |
| !! | TATATTATTATGAGAAATGC+GGG | + | chr1_1:73523632-73523651 | Msa0042620:intron | 20.0% |
| !!! | ACACTATAATTACTAACTTT+TGG | + | chr1_1:73523789-73523808 | Msa0042620:intron | 20.0% |
| !!! | CACTATAATTACTAACTTTT+GGG | + | chr1_1:73523790-73523809 | Msa0042620:intron | 20.0% |
| !!! | ACTATAATTACTAACTTTTG+GGG | + | chr1_1:73523791-73523810 | Msa0042620:intron | 20.0% |
| !!! | TAAATGCTTGATAATTTACA+TGG | - | chr1_1:73523944-73523963 | None:intergenic | 20.0% |
| !!! | TGTATGGTTAAAACTTTTTA+AGG | - | chr1_1:73524163-73524182 | None:intergenic | 20.0% |
| !!! | ATCTAGTTTTTTTTTTTTGG+GGG | - | chr1_1:73524347-73524366 | None:intergenic | 20.0% |
| !!! | CATCTAGTTTTTTTTTTTTG+GGG | - | chr1_1:73524348-73524367 | None:intergenic | 20.0% |
| !!! | GACATCTAGTTTTTTTTTTT+TGG | - | chr1_1:73524350-73524369 | None:intergenic | 20.0% |
| !! | AAAAACTAGATGTCAAATAA+AGG | + | chr1_1:73524356-73524375 | Msa0042620:intron | 20.0% |
| !!! | TTTCATCTTATTTTGTTTTG+CGG | + | chr1_1:73524595-73524614 | Msa0042620:intron | 20.0% |
| !! | TTGAAACACAATTGAAATAA+TGG | - | chr1_1:73524861-73524880 | None:intergenic | 20.0% |
| !! | GATTGAAGCAAATTTAAAAA+CGG | - | chr1_1:73524900-73524919 | None:intergenic | 20.0% |
| !! | TTATATTGTTACATTACATG+TGG | - | chr1_1:73525370-73525389 | None:intergenic | 20.0% |
| !!! | ATTTATTCGTGTTTTTTTGC+AGG | + | chr1_1:73518050-73518069 | Msa0042620:intron | 25.0% |
| ! | TAAATCTAGAAAATGCTTTC+TGG | + | chr1_1:73518088-73518107 | Msa0042620:exon | 25.0% |
| ! | AAATCTAGAAAATGCTTTCT+GGG | + | chr1_1:73518089-73518108 | Msa0042620:exon | 25.0% |
| ! | GAAAAAAATCAGATATTAGG+AGG | + | chr1_1:73518286-73518305 | Msa0042620:CDS | 25.0% |
| ! | CAGCTTGATAAGATAAAAAA+AGG | + | chr1_1:73518348-73518367 | Msa0042620:CDS | 25.0% |
| ! | TAAAAAGGAATATACATCTG+AGG | + | chr1_1:73518503-73518522 | Msa0042620:CDS | 25.0% |
| ! | AAAAGTCATGTTCAAAAGAT+GGG | + | chr1_1:73518583-73518602 | Msa0042620:CDS | 25.0% |
| !! | CATTTCTTTTCTTGCAATAT+CGG | - | chr1_1:73518640-73518659 | None:intergenic | 25.0% |
| ! | GATATTGCAAGAAAAGAAAT+GGG | + | chr1_1:73518639-73518658 | Msa0042620:CDS | 25.0% |
| !!! | AAATTCTAAGATTAATGCCA+TGG | - | chr1_1:73519043-73519062 | None:intergenic | 25.0% |
| !!! | TCCTTTTTTTATTCCACAAA+GGG | - | chr1_1:73519106-73519125 | None:intergenic | 25.0% |
| !!! | TTCCTTTTTTTATTCCACAA+AGG | - | chr1_1:73519107-73519126 | None:intergenic | 25.0% |
| ! | ATGTATCCCTATAACTTAAA+GGG | - | chr1_1:73519258-73519277 | None:intergenic | 25.0% |
| ! | CAAAACAACTGTAAGATAAA+AGG | + | chr1_1:73519282-73519301 | Msa0042620:intron | 25.0% |
| ! | TAAAAGGAGATATAAACCAT+AGG | + | chr1_1:73519298-73519317 | Msa0042620:intron | 25.0% |
| ! | AAGTATAGTTACTCATTTGT+AGG | - | chr1_1:73519494-73519513 | None:intergenic | 25.0% |
| ! | ATACTTATACAAGACAATGT+AGG | + | chr1_1:73519508-73519527 | Msa0042620:intron | 25.0% |
| ! | CCAAATCTCTCTTAATTATT+TGG | - | chr1_1:73519722-73519741 | None:intergenic | 25.0% |
| ! | CCAAATAATTAAGAGAGATT+TGG | + | chr1_1:73519719-73519738 | Msa0042620:intron | 25.0% |
| !! | GAGAGATTTGGATATAATTT+TGG | + | chr1_1:73519731-73519750 | Msa0042620:intron | 25.0% |
| !! | TTTTGGATTTGATTCAAGAT+TGG | + | chr1_1:73519748-73519767 | Msa0042620:intron | 25.0% |
| ! | CAACTTCAAATATTATGTCA+AGG | + | chr1_1:73519989-73520008 | Msa0042620:intron | 25.0% |
| ! | AGCAATAACTAATGAGTAAA+TGG | + | chr1_1:73520090-73520109 | Msa0042620:intron | 25.0% |
| ! | TGTTATCCAAAAACTGAAAA+AGG | + | chr1_1:73520130-73520149 | Msa0042620:intron | 25.0% |
| !! | GTTCTTTTGACATGTTATAT+TGG | - | chr1_1:73520496-73520515 | None:intergenic | 25.0% |
| !! | TTCTTTCTTTTAGTCAAAGA+AGG | + | chr1_1:73520528-73520547 | Msa0042620:intron | 25.0% |
| ! | AATGAAATAATATCAACAGG+AGG | - | chr1_1:73520968-73520987 | None:intergenic | 25.0% |
| ! | GTTCTTTAATTAACGTTCAA+TGG | + | chr1_1:73521031-73521050 | Msa0042620:intron | 25.0% |
| ! | TTCTTAACGTATTCACTATA+TGG | + | chr1_1:73521054-73521073 | Msa0042620:intron | 25.0% |
| ! | TGAACAAAAAAATAATCACG+AGG | - | chr1_1:73521861-73521880 | None:intergenic | 25.0% |
| !!! | TTTTCCATTATTGTTTTGGT+GGG | + | chr1_1:73521921-73521940 | Msa0042620:intron | 25.0% |
| ! | TACATGAAACAAATATGTAG+GGG | - | chr1_1:73522087-73522106 | None:intergenic | 25.0% |
| ! | ATGCATAAATTTGTAGAAAC+CGG | - | chr1_1:73522260-73522279 | None:intergenic | 25.0% |
| ! | TACCTTTCTTATGATTTCAA+TGG | + | chr1_1:73522287-73522306 | Msa0042620:intron | 25.0% |
| !! | GTGACATTTTACTTTATTCA+AGG | + | chr1_1:73522309-73522328 | Msa0042620:intron | 25.0% |
| !!! | TCTTTTTTTGGATATTCTTG+GGG | - | chr1_1:73522511-73522530 | None:intergenic | 25.0% |
| !!! | CATCTTTTTTTGGATATTCT+TGG | - | chr1_1:73522513-73522532 | None:intergenic | 25.0% |
| !!! | GATTTGCATTCATCTTTTTT+TGG | - | chr1_1:73522523-73522542 | None:intergenic | 25.0% |
| ! | TTTGTCTAGAAAATCCAAAT+CGG | + | chr1_1:73522573-73522592 | Msa0042620:CDS | 25.0% |
| ! | AAGATATGTGAAATTTGCAA+TGG | - | chr1_1:73522618-73522637 | None:intergenic | 25.0% |
| ! | AATTGATTAAGTTCTTTGGT+CGG | + | chr1_1:73522794-73522813 | Msa0042620:intron | 25.0% |
| ! | TTGTAATATTATTGCGTGTT+CGG | + | chr1_1:73522902-73522921 | Msa0042620:intron | 25.0% |
| !!! | TCAGTTGATTTGTATCATAA+CGG | + | chr1_1:73523096-73523115 | Msa0042620:intron | 25.0% |
| ! | TAGATGAATAGTTCATTTCA+AGG | - | chr1_1:73523477-73523496 | None:intergenic | 25.0% |
| ! | AATTATCTACAGAGTTTCTT+TGG | + | chr1_1:73523846-73523865 | Msa0042620:intron | 25.0% |
| ! | TTTGACATTTCATCAAAGAA+GGG | - | chr1_1:73523875-73523894 | None:intergenic | 25.0% |
| ! | ATTTGACATTTCATCAAAGA+AGG | - | chr1_1:73523876-73523895 | None:intergenic | 25.0% |
| !!! | TCTAGTTTTTTTTTTTTGGG+GGG | - | chr1_1:73524346-73524365 | None:intergenic | 25.0% |
| ! | ATTTAAATCAAACTCAACGT+GGG | - | chr1_1:73524461-73524480 | None:intergenic | 25.0% |
| ! | AATTTAAATCAAACTCAACG+TGG | - | chr1_1:73524462-73524481 | None:intergenic | 25.0% |
| !! | AAATTCACAAGCTTTTAAAC+TGG | + | chr1_1:73524477-73524496 | Msa0042620:intron | 25.0% |
| ! | TAAGATGAAACCATTTAAAC+TGG | - | chr1_1:73524585-73524604 | None:intergenic | 25.0% |
| ! | ATCATATAATGACATAGTTC+AGG | - | chr1_1:73524642-73524661 | None:intergenic | 25.0% |
| !! | TTTAAATTTGCTTCAATCAC+AGG | + | chr1_1:73524902-73524921 | Msa0042620:intron | 25.0% |
| ! | CCAAATTCTACATGAAAATA+AGG | - | chr1_1:73525026-73525045 | None:intergenic | 25.0% |
| !!! | CCTTATTTTCATGTAGAATT+TGG | + | chr1_1:73525023-73525042 | Msa0042620:CDS | 25.0% |
| !! | GTAGAATTTGGTTTAAACAA+AGG | + | chr1_1:73525035-73525054 | Msa0042620:CDS | 25.0% |
| ! | TTACATAGCAACTATTTCAT+TGG | - | chr1_1:73525449-73525468 | None:intergenic | 25.0% |
| ! | TGAAATAGTTGCTATGTAAT+AGG | + | chr1_1:73525450-73525469 | Msa0042620:three_prime_UTR | 25.0% |
| TAGTGGTAGTTTCAATTTGT+TGG | - | chr1_1:73517738-73517757 | None:intergenic | 30.0% | |
| ACAAATTGAAACTACCACTA+AGG | + | chr1_1:73517738-73517757 | Msa0042620:five_prime_UTR | 30.0% | |
| TGATTGATTGATTACCTTAG+TGG | - | chr1_1:73517755-73517774 | None:intergenic | 30.0% | |
| ! | TTTCTTAGGGCGTTAAAATT+TGG | + | chr1_1:73517783-73517802 | Msa0042620:intron | 30.0% |
| ! | TTCTTAGGGCGTTAAAATTT+GGG | + | chr1_1:73517784-73517803 | Msa0042620:intron | 30.0% |
| CATAAACCTAATATAGAGAG+AGG | - | chr1_1:73517912-73517931 | None:intergenic | 30.0% | |
| !!! | TTTTTTTGCAGGCATTAGTA+AGG | + | chr1_1:73518061-73518080 | Msa0042620:intron | 30.0% |
| AATCTAGAAAATGCTTTCTG+GGG | + | chr1_1:73518090-73518109 | Msa0042620:exon | 30.0% | |
| GCAAAATCAGACTGAAAAAT+AGG | - | chr1_1:73518190-73518209 | None:intergenic | 30.0% | |
| TGTATATACTAGGTACAAGA+TGG | + | chr1_1:73518231-73518250 | Msa0042620:intron | 30.0% | |
| GTATATACTAGGTACAAGAT+GGG | + | chr1_1:73518232-73518251 | Msa0042620:intron | 30.0% | |
| ATCAGATATTAGGAGGAAAA+AGG | + | chr1_1:73518293-73518312 | Msa0042620:CDS | 30.0% | |
| AAGGGAAAAAAGAAAAGAGA+TGG | + | chr1_1:73518465-73518484 | Msa0042620:CDS | 30.0% | |
| GAAAAAAGAAAAGAGATGGA+CGG | + | chr1_1:73518469-73518488 | Msa0042620:CDS | 30.0% | |
| ! | CATCTTTTGAACATGACTTT+TGG | - | chr1_1:73518584-73518603 | None:intergenic | 30.0% |
| CAAAAGTCATGTTCAAAAGA+TGG | + | chr1_1:73518582-73518601 | Msa0042620:CDS | 30.0% | |
| CGATATTGCAAGAAAAGAAA+TGG | + | chr1_1:73518638-73518657 | Msa0042620:CDS | 30.0% | |
| ! | GAGAAACTTTTGTGTCTATA+TGG | + | chr1_1:73518944-73518963 | Msa0042620:intron | 30.0% |
| TACTATCTTTCATTGATGAG+TGG | - | chr1_1:73518977-73518996 | None:intergenic | 30.0% | |
| CTCATCAATGAAAGATAGTA+TGG | + | chr1_1:73518977-73518996 | Msa0042620:intron | 30.0% | |
| TTGAATTGTCCAATATACCA+TGG | + | chr1_1:73519023-73519042 | Msa0042620:intron | 30.0% | |
| AGATTAATGCCATGGTATAT+TGG | - | chr1_1:73519035-73519054 | None:intergenic | 30.0% | |
| GAATGGTGTATTCAAAACAT+TGG | - | chr1_1:73519173-73519192 | None:intergenic | 30.0% | |
| ! | AGCATTTCCCTTTAAGTTAT+AGG | + | chr1_1:73519248-73519267 | Msa0042620:intron | 30.0% |
| ! | GCATTTCCCTTTAAGTTATA+GGG | + | chr1_1:73519249-73519268 | Msa0042620:intron | 30.0% |
| GATGTATCCCTATAACTTAA+AGG | - | chr1_1:73519259-73519278 | None:intergenic | 30.0% | |
| GGAAAATTGTATCACAGTTT+AGG | + | chr1_1:73519384-73519403 | Msa0042620:intron | 30.0% | |
| ATATAGAGTTTAATGTCACG+CGG | + | chr1_1:73519419-73519438 | Msa0042620:intron | 30.0% | |
| ATACAAGACAATGTAGGATT+TGG | + | chr1_1:73519514-73519533 | Msa0042620:intron | 30.0% | |
| ! | TGGTAATGTTCTGTCTTAAA+TGG | + | chr1_1:73519586-73519605 | Msa0042620:intron | 30.0% |
| TAGAATAATCCAATAGTCAG+TGG | + | chr1_1:73519670-73519689 | Msa0042620:intron | 30.0% | |
| ATCTACAATACATCTGCATT+GGG | - | chr1_1:73519900-73519919 | None:intergenic | 30.0% | |
| TATCTACAATACATCTGCAT+TGG | - | chr1_1:73519901-73519920 | None:intergenic | 30.0% | |
| AATGACAATACAACAACAGA+AGG | - | chr1_1:73520019-73520038 | None:intergenic | 30.0% | |
| ! | CCAAAAACTGAAAAAGGTAT+CGG | + | chr1_1:73520136-73520155 | Msa0042620:intron | 30.0% |
| TGAAGTATGATTTAAGCCTT+TGG | + | chr1_1:73520194-73520213 | Msa0042620:intron | 30.0% | |
| TAAGCTGCAAACAAAATGAA+GGG | - | chr1_1:73520400-73520419 | None:intergenic | 30.0% | |
| ATAAGCTGCAAACAAAATGA+AGG | - | chr1_1:73520401-73520420 | None:intergenic | 30.0% | |
| AGATAAGGATTCAATTCCTT+AGG | - | chr1_1:73520559-73520578 | None:intergenic | 30.0% | |
| GGAATTGAATCCTTATCTAA+AGG | + | chr1_1:73520561-73520580 | Msa0042620:CDS | 30.0% | |
| AATCCTTATCTAAAGGATGA+TGG | + | chr1_1:73520568-73520587 | Msa0042620:CDS | 30.0% | |
| AAAGAATGTGTGAAAAGCAA+GGG | - | chr1_1:73520756-73520775 | None:intergenic | 30.0% | |
| TAAAGAATGTGTGAAAAGCA+AGG | - | chr1_1:73520757-73520776 | None:intergenic | 30.0% | |
| TATTATTCTGTTAGGACAGA+AGG | + | chr1_1:73520804-73520823 | Msa0042620:intron | 30.0% | |
| TAGAGGGAAGATAATTAGTT+TGG | + | chr1_1:73520844-73520863 | Msa0042620:intron | 30.0% | |
| ! | AGAGGGAAGATAATTAGTTT+GGG | + | chr1_1:73520845-73520864 | Msa0042620:intron | 30.0% |
| ACGTTAATTAAAGAACGGAA+TGG | - | chr1_1:73521027-73521046 | None:intergenic | 30.0% | |
| TTCACTATATGGATATGTAC+AGG | + | chr1_1:73521065-73521084 | Msa0042620:intron | 30.0% | |
| GAATTTCGCTTATGAAATAC+TGG | + | chr1_1:73521373-73521392 | Msa0042620:intron | 30.0% | |
| ACATAAAAATTACTCCTCCT+CGG | + | chr1_1:73521403-73521422 | Msa0042620:CDS | 30.0% | |
| GATAATGAATCTTGCACTTT+AGG | - | chr1_1:73521447-73521466 | None:intergenic | 30.0% | |
| AAGTGCAAGATTCATTATCT+TGG | + | chr1_1:73521448-73521467 | Msa0042620:CDS | 30.0% | |
| !!! | TGTTTTGGAAAGTTTTGAAG+CGG | + | chr1_1:73521611-73521630 | Msa0042620:CDS | 30.0% |
| ! | GTGCTTTTCCATTATTGTTT+TGG | + | chr1_1:73521917-73521936 | Msa0042620:intron | 30.0% |
| !!! | CTTTTCCATTATTGTTTTGG+TGG | + | chr1_1:73521920-73521939 | Msa0042620:intron | 30.0% |
| TGAAATTAGATCAAGAACTG+AGG | + | chr1_1:73521991-73522010 | Msa0042620:CDS | 30.0% | |
| GAAATTAGATCAAGAACTGA+GGG | + | chr1_1:73521992-73522011 | Msa0042620:CDS | 30.0% | |
| CACCATTGAAATCATAAGAA+AGG | - | chr1_1:73522292-73522311 | None:intergenic | 30.0% | |
| ! | TTCTTTCTACTCTTTTTGCT+TGG | - | chr1_1:73522473-73522492 | None:intergenic | 30.0% |
| AAAAAGAGTAGAAAGAAGCA+AGG | + | chr1_1:73522476-73522495 | Msa0042620:CDS | 30.0% | |
| ! | TTGGATTTTCTAGACAAAAG+AGG | - | chr1_1:73522571-73522590 | None:intergenic | 30.0% |
| GAAATTAAACTCACGTGAAT+GGG | - | chr1_1:73522689-73522708 | None:intergenic | 30.0% | |
| AGAAATTAAACTCACGTGAA+TGG | - | chr1_1:73522690-73522709 | None:intergenic | 30.0% | |
| !!! | AAGCTTATGGTTTTTTCAAC+TGG | - | chr1_1:73522744-73522763 | None:intergenic | 30.0% |
| TGAAGTAGATGATAGTAACA+AGG | + | chr1_1:73522829-73522848 | Msa0042620:intron | 30.0% | |
| ATAAACCATATTTGGATCCA+AGG | - | chr1_1:73522934-73522953 | None:intergenic | 30.0% | |
| GCTCTATCATAAACCATATT+TGG | - | chr1_1:73522942-73522961 | None:intergenic | 30.0% | |
| TGGTTTATGATAGAGCAATA+TGG | + | chr1_1:73522946-73522965 | Msa0042620:intron | 30.0% | |
| TGATTCATGCTGTCATATTA+AGG | - | chr1_1:73523166-73523185 | None:intergenic | 30.0% | |
| CTGACCTTCTTAAAGTATAA+AGG | - | chr1_1:73523375-73523394 | None:intergenic | 30.0% | |
| !! | TATAAGAAAAGCACTGATTC+TGG | - | chr1_1:73523449-73523468 | None:intergenic | 30.0% |
| ! | GAATGTATTCAGAGCATTTA+AGG | + | chr1_1:73523654-73523673 | Msa0042620:intron | 30.0% |
| CCTTATTATAGAAACGCTAT+GGG | - | chr1_1:73523715-73523734 | None:intergenic | 30.0% | |
| ACCTTATTATAGAAACGCTA+TGG | - | chr1_1:73523716-73523735 | None:intergenic | 30.0% | |
| AGATAGTTCAAACTGCAAAT+TGG | + | chr1_1:73523896-73523915 | Msa0042620:intron | 30.0% | |
| AAAAAGTTGACAAACACACA+AGG | - | chr1_1:73523976-73523995 | None:intergenic | 30.0% | |
| ! | TTGTGTGTTTGTCAACTTTT+TGG | + | chr1_1:73523975-73523994 | Msa0042620:intron | 30.0% |
| ! | TGTGTGTTTGTCAACTTTTT+GGG | + | chr1_1:73523976-73523995 | Msa0042620:intron | 30.0% |
| ACTTAGAGAAAGATGACATT+AGG | + | chr1_1:73524035-73524054 | Msa0042620:intron | 30.0% | |
| ! | ACCTTTTGGTATCAAATTTG+TGG | - | chr1_1:73524108-73524127 | None:intergenic | 30.0% |
| TCAATATAGAGTAATGAAGC+AGG | - | chr1_1:73524139-73524158 | None:intergenic | 30.0% | |
| TAGATGTCAAATAAAGGACA+GGG | + | chr1_1:73524362-73524381 | Msa0042620:intron | 30.0% | |
| AACCACATCATGTATAAAAC+TGG | + | chr1_1:73524548-73524567 | Msa0042620:intron | 30.0% | |
| !! | ATCCAGTTTTATACATGATG+TGG | - | chr1_1:73524553-73524572 | None:intergenic | 30.0% |
| TCAGTTTCTACCAGTTTAAA+TGG | + | chr1_1:73524572-73524591 | Msa0042620:intron | 30.0% | |
| !! | TAAGTTTTAATGACCACATG+TGG | - | chr1_1:73524683-73524702 | None:intergenic | 30.0% |
| TGATATTCCAGTATAGCATT+TGG | + | chr1_1:73524790-73524809 | Msa0042620:intron | 30.0% | |
| ! | TTTTTCACCAAATGCTATAC+TGG | - | chr1_1:73524800-73524819 | None:intergenic | 30.0% |
| GAAGCAAATTTAAAAACGGA+CGG | - | chr1_1:73524896-73524915 | None:intergenic | 30.0% | |
| TGAAAATAAGGAAAGTCCTT+GGG | - | chr1_1:73525014-73525033 | None:intergenic | 30.0% | |
| ATGAAAATAAGGAAAGTCCT+TGG | - | chr1_1:73525015-73525034 | None:intergenic | 30.0% | |
| ! | CCTTTTCATCATCAATAACA+TGG | - | chr1_1:73525067-73525086 | None:intergenic | 30.0% |
| !! | CCATGTTATTGATGATGAAA+AGG | + | chr1_1:73525064-73525083 | Msa0042620:CDS | 30.0% |
| !!! | CATTGGTAATATGCTGATTT+TGG | - | chr1_1:73525432-73525451 | None:intergenic | 30.0% |
| ! | TTTTGTAGTTCACTATTCCC+CGG | + | chr1_1:73517469-73517488 | Msa0042620:five_prime_UTR | 35.0% |
| ! | ACTAATAGAAGGGTGTAGAA+TGG | - | chr1_1:73517614-73517633 | None:intergenic | 35.0% |
| CGGAGAGAAAACTAATAGAA+GGG | - | chr1_1:73517624-73517643 | None:intergenic | 35.0% | |
| ACGGAGAGAAAACTAATAGA+AGG | - | chr1_1:73517625-73517644 | None:intergenic | 35.0% | |
| !! | TGGTAGTTTCAATTTGTTGG+AGG | - | chr1_1:73517735-73517754 | None:intergenic | 35.0% |
| TGATTGATTGATCCTGCAAT+TGG | + | chr1_1:73517833-73517852 | Msa0042620:intron | 35.0% | |
| GATTGATTGATCCTGCAATT+GGG | + | chr1_1:73517834-73517853 | Msa0042620:intron | 35.0% | |
| ATTGATTGATCCTGCAATTG+GGG | + | chr1_1:73517835-73517854 | Msa0042620:intron | 35.0% | |
| AATCGACCTCTCTCTATATT+AGG | + | chr1_1:73517903-73517922 | Msa0042620:intron | 35.0% | |
| TGAGACTGATAGAAGAAGTA+TGG | - | chr1_1:73518152-73518171 | None:intergenic | 35.0% | |
| GTTACTGCGTTGTATATACT+AGG | + | chr1_1:73518221-73518240 | Msa0042620:intron | 35.0% | |
| TTAGGAGGAAAAAGGATAAG+AGG | + | chr1_1:73518301-73518320 | Msa0042620:CDS | 35.0% | |
| TGAATACCACTTCTTCTTTC+TGG | - | chr1_1:73518376-73518395 | None:intergenic | 35.0% | |
| TGCAAGAAAAGAAATGGGAT+TGG | + | chr1_1:73518644-73518663 | Msa0042620:CDS | 35.0% | |
| GAAAAGAAATGGGATTGGAT+TGG | + | chr1_1:73518649-73518668 | Msa0042620:CDS | 35.0% | |
| TGCTTAAGTCTGAAAGTAAG+AGG | + | chr1_1:73518673-73518692 | Msa0042620:CDS | 35.0% | |
| GCCCTTTGTGGAATAAAAAA+AGG | + | chr1_1:73519102-73519121 | Msa0042620:intron | 35.0% | |
| ACTTAAAGGGAAATGCTAAC+AGG | - | chr1_1:73519245-73519264 | None:intergenic | 35.0% | |
| ! | TGTTTGGATTTTGGATCCTA+TGG | - | chr1_1:73519317-73519336 | None:intergenic | 35.0% |
| AAAATCCAAACAGTGTGGAT+GGG | + | chr1_1:73519325-73519344 | Msa0042620:intron | 35.0% | |
| !! | AAGGTGCCACTCAATATTAA+AGG | + | chr1_1:73519363-73519382 | Msa0042620:intron | 35.0% |
| TAAACTCTATATAGTGCTGC+AGG | - | chr1_1:73519411-73519430 | None:intergenic | 35.0% | |
| AAGATCTTTGTCGCAAATGT+TGG | + | chr1_1:73519462-73519481 | Msa0042620:intron | 35.0% | |
| AATCATCGCAGATGAAGTTT+GGG | + | chr1_1:73519542-73519561 | Msa0042620:intron | 35.0% | |
| TACCATCTTTGCTACGATAA+GGG | - | chr1_1:73519571-73519590 | None:intergenic | 35.0% | |
| TTACCATCTTTGCTACGATA+AGG | - | chr1_1:73519572-73519591 | None:intergenic | 35.0% | |
| ATAATCCAATAGTCAGTGGA+AGG | + | chr1_1:73519674-73519693 | Msa0042620:intron | 35.0% | |
| ! | ACAAAAGTTTTACAGCACCA+GGG | - | chr1_1:73519850-73519869 | None:intergenic | 35.0% |
| ! | CTTTTGTCATGTTATAGTGC+AGG | + | chr1_1:73519863-73519882 | Msa0042620:intron | 35.0% |
| TCTTACGTTCTATCTTCTAG+AGG | + | chr1_1:73519922-73519941 | Msa0042620:intron | 35.0% | |
| GAAATTACAAGTTTGAGCTG+TGG | - | chr1_1:73519954-73519973 | None:intergenic | 35.0% | |
| !!! | CCGATACCTTTTTCAGTTTT+TGG | - | chr1_1:73520139-73520158 | None:intergenic | 35.0% |
| TTCCATATTGATGTTCCAAC+AGG | + | chr1_1:73520339-73520358 | Msa0042620:intron | 35.0% | |
| GTGAAGTGTATGTTCAGTTA+TGG | + | chr1_1:73520361-73520380 | Msa0042620:intron | 35.0% | |
| AAGCTGCAAACAAAATGAAG+GGG | - | chr1_1:73520399-73520418 | None:intergenic | 35.0% | |
| CTTCCATCATCCTTTAGATA+AGG | - | chr1_1:73520574-73520593 | None:intergenic | 35.0% | |
| !! | TATCTAAAGGATGATGGAAG+TGG | + | chr1_1:73520574-73520593 | Msa0042620:CDS | 35.0% |
| ! | CGTTTTTATAGGATAGACAG+AGG | - | chr1_1:73520783-73520802 | None:intergenic | 35.0% |
| ATCTTTGCTTGGAAGAATAG+AGG | + | chr1_1:73520827-73520846 | Msa0042620:intron | 35.0% | |
| TCTTTGCTTGGAAGAATAGA+GGG | + | chr1_1:73520828-73520847 | Msa0042620:intron | 35.0% | |
| AAATGTGTAAGTGTAGTGAG+AGG | + | chr1_1:73520868-73520887 | Msa0042620:intron | 35.0% | |
| AGAATGATGAAACCCTTGTA+AGG | + | chr1_1:73520932-73520951 | Msa0042620:intron | 35.0% | |
| ATATGGATATGTACAGGTTG+TGG | + | chr1_1:73521071-73521090 | Msa0042620:intron | 35.0% | |
| TATGGATATGTACAGGTTGT+GGG | + | chr1_1:73521072-73521091 | Msa0042620:intron | 35.0% | |
| CTATAAGAAGCAGACAAAGA+GGG | + | chr1_1:73521175-73521194 | Msa0042620:CDS | 35.0% | |
| TATAAGAAGCAGACAAAGAG+GGG | + | chr1_1:73521176-73521195 | Msa0042620:CDS | 35.0% | |
| ATTCTGATAAGCCTATCCAA+CGG | + | chr1_1:73521220-73521239 | Msa0042620:CDS | 35.0% | |
| ! | TATCCAACGGGATTCTAAAA+GGG | + | chr1_1:73521233-73521252 | Msa0042620:CDS | 35.0% |
| CTTTAGGTGCTTTCATTTCA+TGG | - | chr1_1:73521431-73521450 | None:intergenic | 35.0% | |
| TGAAGAAGCTGATAGACTAA+TGG | + | chr1_1:73521749-73521768 | Msa0042620:CDS | 35.0% | |
| AAAATAATCACGAGGCTAGA+AGG | - | chr1_1:73521853-73521872 | None:intergenic | 35.0% | |
| TTTCGGATGTGAAAACATTG+TGG | + | chr1_1:73522107-73522126 | Msa0042620:intron | 35.0% | |
| TGAAAACATTGTGGCTAAGA+TGG | + | chr1_1:73522116-73522135 | Msa0042620:intron | 35.0% | |
| ! | ACGTTTTGCATCAATAGTAC+CGG | + | chr1_1:73522238-73522257 | Msa0042620:intron | 35.0% |
| ATATCTTCTGAGCAGAAGAA+AGG | + | chr1_1:73522347-73522366 | Msa0042620:CDS | 35.0% | |
| AATGCAGAACAAGCAGTTTA+AGG | + | chr1_1:73522406-73522425 | Msa0042620:CDS | 35.0% | |
| ! | GCAGTTTAAGGTTTATACTC+AGG | + | chr1_1:73522418-73522437 | Msa0042620:CDS | 35.0% |
| ! | GTTTAAGGTTTATACTCAGG+CGG | + | chr1_1:73522421-73522440 | Msa0042620:CDS | 35.0% |
| TTCAACGAACAACAAGCTTA+TGG | - | chr1_1:73522757-73522776 | None:intergenic | 35.0% | |
| AGTAACCTTGGATCCAAATA+TGG | + | chr1_1:73522926-73522945 | Msa0042620:intron | 35.0% | |
| !!! | TGGTGGTTTTTGTTGTTGTT+TGG | + | chr1_1:73523014-73523033 | Msa0042620:intron | 35.0% |
| AGTGTTTCTTGAAACTGTGA+TGG | + | chr1_1:73523278-73523297 | Msa0042620:CDS | 35.0% | |
| GTGTTTCTTGAAACTGTGAT+GGG | + | chr1_1:73523279-73523298 | Msa0042620:CDS | 35.0% | |
| ! | GGCTCCTTTATACTTTAAGA+AGG | + | chr1_1:73523368-73523387 | Msa0042620:CDS | 35.0% |
| AAAACATCATCAGTGTTCCA+TGG | + | chr1_1:73523541-73523560 | Msa0042620:intron | 35.0% | |
| AAACATCATCAGTGTTCCAT+GGG | + | chr1_1:73523542-73523561 | Msa0042620:intron | 35.0% | |
| CCCATAGCGTTTCTATAATA+AGG | + | chr1_1:73523712-73523731 | Msa0042620:intron | 35.0% | |
| !! | TTGGGGAGTAACTTGTTAAA+TGG | + | chr1_1:73523808-73523827 | Msa0042620:intron | 35.0% |
| !! | CTTGTTAAATGGTTCTAGCA+TGG | + | chr1_1:73523819-73523838 | Msa0042620:intron | 35.0% |
| ! | GGTTTTCTCATTCAACTTCA+TGG | - | chr1_1:73523923-73523942 | None:intergenic | 35.0% |
| ! | GTGTGTTTGTCAACTTTTTG+GGG | + | chr1_1:73523977-73523996 | Msa0042620:intron | 35.0% |
| TCTAAGTACGATACATGACT+AGG | - | chr1_1:73524022-73524041 | None:intergenic | 35.0% | |
| ATCCAAATGTCCTCGTATAA+GGG | - | chr1_1:73524063-73524082 | None:intergenic | 35.0% | |
| GCCACAAATTTGATACCAAA+AGG | + | chr1_1:73524104-73524123 | Msa0042620:intron | 35.0% | |
| !! | CTGCTTCATTTTTGTTTCCA+TGG | + | chr1_1:73524197-73524216 | Msa0042620:intron | 35.0% |
| !! | TTTTGTTTCCATGGAGTACT+CGG | + | chr1_1:73524206-73524225 | Msa0042620:intron | 35.0% |
| !!! | ACATCTGCAGTTTTAAGATC+CGG | - | chr1_1:73524266-73524285 | None:intergenic | 35.0% |
| GCAGATGTCATGTTTAGATA+TGG | + | chr1_1:73524278-73524297 | Msa0042620:intron | 35.0% | |
| CATGTTTAGATATGGTCATG+TGG | + | chr1_1:73524286-73524305 | Msa0042620:intron | 35.0% | |
| !!! | GTTTTTTTTTTTTGGGGGGT+GGG | - | chr1_1:73524342-73524361 | None:intergenic | 35.0% |
| !!! | AGTTTTTTTTTTTTGGGGGG+TGG | - | chr1_1:73524343-73524362 | None:intergenic | 35.0% |
| CTAGATGTCAAATAAAGGAC+AGG | + | chr1_1:73524361-73524380 | Msa0042620:intron | 35.0% | |
| ! | CACAAGCTTTTAAACTGGTT+CGG | + | chr1_1:73524482-73524501 | Msa0042620:intron | 35.0% |
| AATGATCCCAAAGGAAAACA+AGG | - | chr1_1:73524771-73524790 | None:intergenic | 35.0% | |
| TGGAATATCAATGATCCCAA+AGG | - | chr1_1:73524780-73524799 | None:intergenic | 35.0% | |
| ! | ACTCGTATCAATGAGTCTTT+TGG | - | chr1_1:73524967-73524986 | None:intergenic | 35.0% |
| AAGGAGTTTAAGAGTAGTCT+TGG | + | chr1_1:73525083-73525102 | Msa0042620:CDS | 35.0% | |
| AGGAGTTTAAGAGTAGTCTT+GGG | + | chr1_1:73525084-73525103 | Msa0042620:CDS | 35.0% | |
| AAGACATGTATAGACGTCAA+AGG | + | chr1_1:73525144-73525163 | Msa0042620:CDS | 35.0% | |
| CAATATAACTCGTTTATGCC+CGG | + | chr1_1:73525382-73525401 | Msa0042620:three_prime_UTR | 35.0% | |
| AATATAACTCGTTTATGCCC+GGG | + | chr1_1:73525383-73525402 | Msa0042620:three_prime_UTR | 35.0% | |
| ! | ATTTGTTGGAGGCTGCAAAT+TGG | - | chr1_1:73517724-73517743 | None:intergenic | 40.0% |
| TCCCTGCTGTGAAATTGATT+AGG | + | chr1_1:73517871-73517890 | Msa0042620:intron | 40.0% | |
| CCCTAATCAATTTCACAGCA+GGG | - | chr1_1:73517875-73517894 | None:intergenic | 40.0% | |
| CCCTGCTGTGAAATTGATTA+GGG | + | chr1_1:73517872-73517891 | Msa0042620:intron | 40.0% | |
| ACCCTAATCAATTTCACAGC+AGG | - | chr1_1:73517876-73517895 | None:intergenic | 40.0% | |
| GCATAAACCTCAATCAGCAA+GGG | - | chr1_1:73517950-73517969 | None:intergenic | 40.0% | |
| TGCATAAACCTCAATCAGCA+AGG | - | chr1_1:73517951-73517970 | None:intergenic | 40.0% | |
| TAACTCTACAAACCTGGTCA+CGG | - | chr1_1:73518129-73518148 | None:intergenic | 40.0% | |
| GTATGGTAACTCTACAAACC+TGG | - | chr1_1:73518135-73518154 | None:intergenic | 40.0% | |
| TACAAGATGGGAACTTGGAT+AGG | + | chr1_1:73518244-73518263 | Msa0042620:CDS | 40.0% | |
| ACAAGATGGGAACTTGGATA+GGG | + | chr1_1:73518245-73518264 | Msa0042620:CDS | 40.0% | |
| GAAGACTCTTCTTCTTCAGA+TGG | + | chr1_1:73518525-73518544 | Msa0042620:CDS | 40.0% | |
| !!! | ATGACTTTTGGTGTTTCCGT+TGG | - | chr1_1:73518572-73518591 | None:intergenic | 40.0% |
| TCATGTTCAAAAGATGGGAG+CGG | + | chr1_1:73518588-73518607 | Msa0042620:CDS | 40.0% | |
| !! | TCCTTTGTTTCTGAAACAGC+TGG | - | chr1_1:73518699-73518718 | None:intergenic | 40.0% |
| AACAAAGGAGATATTGCCAG+AGG | + | chr1_1:73518710-73518729 | Msa0042620:CDS | 40.0% | |
| CTAAGACATACCTCCTTAAC+CGG | - | chr1_1:73518741-73518760 | None:intergenic | 40.0% | |
| TAGACATTTGAACAGCTGAG+GGG | - | chr1_1:73518779-73518798 | None:intergenic | 40.0% | |
| CTAGACATTTGAACAGCTGA+GGG | - | chr1_1:73518780-73518799 | None:intergenic | 40.0% | |
| TTATGCCCGTCATAATCTGT+TGG | + | chr1_1:73518857-73518876 | Msa0042620:intron | 40.0% | |
| ACGACACCAACAGATTATGA+CGG | - | chr1_1:73518866-73518885 | None:intergenic | 40.0% | |
| GAAAGATAGTATGGAACGCA+AGG | + | chr1_1:73518986-73519005 | Msa0042620:intron | 40.0% | |
| GATCCAAAATCCAAACAGTG+TGG | + | chr1_1:73519320-73519339 | Msa0042620:intron | 40.0% | |
| ! | CATCCACACTGTTTGGATTT+TGG | - | chr1_1:73519326-73519345 | None:intergenic | 40.0% |
| CAAAATCCAAACAGTGTGGA+TGG | + | chr1_1:73519324-73519343 | Msa0042620:intron | 40.0% | |
| ! | TGGGTGTGATTTGTGATAGA+AGG | + | chr1_1:73519344-73519363 | Msa0042620:intron | 40.0% |
| CTTTGTCGCAAATGTTGGAA+TGG | + | chr1_1:73519467-73519486 | Msa0042620:intron | 40.0% | |
| GAATCATCGCAGATGAAGTT+TGG | + | chr1_1:73519541-73519560 | Msa0042620:intron | 40.0% | |
| ! | CTTTTCTCAATAGGTGGGAT+TGG | - | chr1_1:73519802-73519821 | None:intergenic | 40.0% |
| CAATCCCACCTATTGAGAAA+AGG | + | chr1_1:73519800-73519819 | Msa0042620:intron | 40.0% | |
| ! | GACAAAAGTTTTACAGCACC+AGG | - | chr1_1:73519851-73519870 | None:intergenic | 40.0% |
| ! | CGGATTCAGATAGTTAGCTT+TGG | + | chr1_1:73520156-73520175 | Msa0042620:intron | 40.0% |
| CACCTGTTGGAACATCAATA+TGG | - | chr1_1:73520344-73520363 | None:intergenic | 40.0% | |
| TGAACATACACTTCACCTGT+TGG | - | chr1_1:73520357-73520376 | None:intergenic | 40.0% | |
| GTCAAAGAAGGCAAATCCTA+AGG | + | chr1_1:73520540-73520559 | Msa0042620:intron | 40.0% | |
| AAGTGGTTACGCAGAAGAAA+GGG | + | chr1_1:73520591-73520610 | Msa0042620:CDS | 40.0% | |
| AGCAAGGGAATAAAACCTCT+TGG | - | chr1_1:73520741-73520760 | None:intergenic | 40.0% | |
| TGAGAGGACCATTAGCATTT+GGG | + | chr1_1:73520884-73520903 | Msa0042620:intron | 40.0% | |
| GTTCAGTTCCCAAATGCTAA+TGG | - | chr1_1:73520895-73520914 | None:intergenic | 40.0% | |
| GGAGACAATTCTCCTTACAA+GGG | - | chr1_1:73520947-73520966 | None:intergenic | 40.0% | |
| AGGAGACAATTCTCCTTACA+AGG | - | chr1_1:73520948-73520967 | None:intergenic | 40.0% | |
| GCTATAAGAAGCAGACAAAG+AGG | + | chr1_1:73521174-73521193 | Msa0042620:CDS | 40.0% | |
| TGGATAGGCTTATCAGAATC+TGG | - | chr1_1:73521219-73521238 | None:intergenic | 40.0% | |
| TTCTGATAAGCCTATCCAAC+GGG | + | chr1_1:73521221-73521240 | Msa0042620:CDS | 40.0% | |
| !!! | CTTTTAGAATCCCGTTGGAT+AGG | - | chr1_1:73521234-73521253 | None:intergenic | 40.0% |
| CTATCCAACGGGATTCTAAA+AGG | + | chr1_1:73521232-73521251 | Msa0042620:CDS | 40.0% | |
| !!! | TTACCCTTTTAGAATCCCGT+TGG | - | chr1_1:73521239-73521258 | None:intergenic | 40.0% |
| CGAAATTCAGTGAAGTGCAA+TGG | - | chr1_1:73521361-73521380 | None:intergenic | 40.0% | |
| TTCGCTTATGAAATACTGGC+AGG | + | chr1_1:73521377-73521396 | Msa0042620:intron | 40.0% | |
| TATGCGTGAGTTAGTTAGCA+AGG | + | chr1_1:73521566-73521585 | Msa0042620:CDS | 40.0% | |
| ACTTTCCAAAACAGAGCCAT+CGG | - | chr1_1:73521604-73521623 | None:intergenic | 40.0% | |
| !!! | GGAAAGTTTTGAAGCGGAAA+AGG | + | chr1_1:73521617-73521636 | Msa0042620:CDS | 40.0% |
| !! | ACTACTGCTTTTCTTTCACC+AGG | - | chr1_1:73521663-73521682 | None:intergenic | 40.0% |
| TAACATGAGTGCAAACCAGT+TGG | + | chr1_1:73521689-73521708 | Msa0042620:CDS | 40.0% | |
| TCCTTTCAAACGAAGTTGCA+TGG | - | chr1_1:73521724-73521743 | None:intergenic | 40.0% | |
| CTAATGGTAAGCCCATAAGA+CGG | + | chr1_1:73521765-73521784 | Msa0042620:intron | 40.0% | |
| TAATGGTAAGCCCATAAGAC+GGG | + | chr1_1:73521766-73521785 | Msa0042620:intron | 40.0% | |
| !!! | AAGGGTTTTGAACACAAAGC+AGG | + | chr1_1:73521955-73521974 | Msa0042620:CDS | 40.0% |
| !!! | AGGGTTTTGAACACAAAGCA+GGG | + | chr1_1:73521956-73521975 | Msa0042620:CDS | 40.0% |
| !! | AGGGAAGTTCTAGTTCTAGA+AGG | + | chr1_1:73522011-73522030 | Msa0042620:CDS | 40.0% |
| ATTCAAGGTATGCTATGCAG+AGG | + | chr1_1:73522324-73522343 | Msa0042620:intron | 40.0% | |
| AAGAGTAGAAAGAAGCAAGG+AGG | + | chr1_1:73522479-73522498 | Msa0042620:CDS | 40.0% | |
| AAAGAGGCAACGTTCTTTCT+GGG | - | chr1_1:73522555-73522574 | None:intergenic | 40.0% | |
| AAAAGAGGCAACGTTCTTTC+TGG | - | chr1_1:73522556-73522575 | None:intergenic | 40.0% | |
| ATGGACACAACAAGATGCAT+CGG | - | chr1_1:73522599-73522618 | None:intergenic | 40.0% | |
| CATATCTTATGTTGCCACAG+TGG | + | chr1_1:73522630-73522649 | Msa0042620:CDS | 40.0% | |
| GGTAAAATACAGCAATGACC+AGG | - | chr1_1:73522668-73522687 | None:intergenic | 40.0% | |
| GCATGAATCAGCTACAAGAA+CGG | + | chr1_1:73523176-73523195 | Msa0042620:intron | 40.0% | |
| ! | AACGGTGGATGATAATGTGT+GGG | + | chr1_1:73523194-73523213 | Msa0042620:CDS | 40.0% |
| ! | TCTTGAAACTGTGATGGGAT+TGG | + | chr1_1:73523284-73523303 | Msa0042620:CDS | 40.0% |
| TTAGCAACATCTTTGGGTAC+AGG | - | chr1_1:73523345-73523364 | None:intergenic | 40.0% | |
| ACCCAAAGATGTTGCTAAAG+AGG | + | chr1_1:73523347-73523366 | Msa0042620:CDS | 40.0% | |
| GCCTCTTTAGCAACATCTTT+GGG | - | chr1_1:73523351-73523370 | None:intergenic | 40.0% | |
| AGCCTCTTTAGCAACATCTT+TGG | - | chr1_1:73523352-73523371 | None:intergenic | 40.0% | |
| AACATCATCAGTGTTCCATG+GGG | + | chr1_1:73523543-73523562 | Msa0042620:intron | 40.0% | |
| !!! | TCAACTTTTTGGGGTGTCTT+GGG | + | chr1_1:73523986-73524005 | Msa0042620:intron | 40.0% |
| ACATTAGGTTCCCTTATACG+AGG | + | chr1_1:73524050-73524069 | Msa0042620:intron | 40.0% | |
| TTCCCTTATACGAGGACATT+TGG | + | chr1_1:73524058-73524077 | Msa0042620:intron | 40.0% | |
| CATCCAAATGTCCTCGTATA+AGG | - | chr1_1:73524064-73524083 | None:intergenic | 40.0% | |
| GACATTTGGATGACCTAACT+AGG | + | chr1_1:73524072-73524091 | Msa0042620:intron | 40.0% | |
| AGCAATCAGTGTAGACTGTA+TGG | - | chr1_1:73524179-73524198 | None:intergenic | 40.0% | |
| TGGTTTAGTGTGAGATTTGC+CGG | + | chr1_1:73524244-73524263 | Msa0042620:intron | 40.0% | |
| ! | GGATGGATGTCTCAGATTTT+AGG | - | chr1_1:73524321-73524340 | None:intergenic | 40.0% |
| ATAAAGGACAGGGATGATAG+TGG | + | chr1_1:73524372-73524391 | Msa0042620:intron | 40.0% | |
| TCATGATTCATGACTTCACG+TGG | + | chr1_1:73524412-73524431 | Msa0042620:intron | 40.0% | |
| !!! | TACCCACCTTGTTTTCCTTT+GGG | + | chr1_1:73524762-73524781 | Msa0042620:intron | 40.0% |
| ATCCCAAAGGAAAACAAGGT+GGG | - | chr1_1:73524767-73524786 | None:intergenic | 40.0% | |
| AAAAACGGACGGTGAGTTTA+TGG | - | chr1_1:73524885-73524904 | None:intergenic | 40.0% | |
| TTGATGAAGCAGAAGATGAG+TGG | + | chr1_1:73524928-73524947 | Msa0042620:CDS | 40.0% | |
| ACTCATTGATACGAGTCAGA+AGG | + | chr1_1:73524971-73524990 | Msa0042620:CDS | 40.0% | |
| CTCATTGATACGAGTCAGAA+GGG | + | chr1_1:73524972-73524991 | Msa0042620:CDS | 40.0% | |
| TTTACGCAACTCAATTCCCA+AGG | + | chr1_1:73524995-73525014 | Msa0042620:CDS | 40.0% | |
| !! | CTTGGGTTGAATGTCATTAG+AGG | + | chr1_1:73525101-73525120 | Msa0042620:CDS | 40.0% |
| !!! | TTGCTAGCTTTTCCAAAGAC+TGG | + | chr1_1:73525198-73525217 | Msa0042620:CDS | 40.0% |
| !!! | TGCTAGCTTTTCCAAAGACT+GGG | + | chr1_1:73525199-73525218 | Msa0042620:CDS | 40.0% |
| GTCAAAATGATCCCAGTCTT+TGG | - | chr1_1:73525213-73525232 | None:intergenic | 40.0% | |
| !! | AAGACTGGGATCATTTTGAC+TGG | + | chr1_1:73525213-73525232 | Msa0042620:CDS | 40.0% |
| AACTAGCATCTCTTGGCAAT+TGG | - | chr1_1:73525344-73525363 | None:intergenic | 40.0% | |
| CTATGATTCTCATAAAGCCC+GGG | - | chr1_1:73525403-73525422 | None:intergenic | 40.0% | |
| CCTATGATTCTCATAAAGCC+CGG | - | chr1_1:73525404-73525423 | None:intergenic | 40.0% | |
| !! | GAAGTTTTGTGGTGAATCCG+GGG | - | chr1_1:73517489-73517508 | None:intergenic | 45.0% |
| !! | GGAAGTTTTGTGGTGAATCC+GGG | - | chr1_1:73517490-73517509 | None:intergenic | 45.0% |
| !! | GGGAAGTTTTGTGGTGAATC+CGG | - | chr1_1:73517491-73517510 | None:intergenic | 45.0% |
| AAAGAAGGAAGGAGAGGTTG+TGG | - | chr1_1:73517569-73517588 | None:intergenic | 45.0% | |
| GAAAGGAAAGAAGGAAGGAG+AGG | - | chr1_1:73517575-73517594 | None:intergenic | 45.0% | |
| !! | GTGTAGAATGGTAGTGGAGT+GGG | - | chr1_1:73517602-73517621 | None:intergenic | 45.0% |
| ! | AGAAGGGTGTAGAATGGTAG+TGG | - | chr1_1:73517608-73517627 | None:intergenic | 45.0% |
| CACAGCAGGGATATACGATT+AGG | - | chr1_1:73517862-73517881 | None:intergenic | 45.0% | |
| ! | TTCTCAACCCTTGCTGATTG+AGG | + | chr1_1:73517940-73517959 | Msa0042620:intron | 45.0% |
| AACTCTACAAACCTGGTCAC+GGG | - | chr1_1:73518128-73518147 | None:intergenic | 45.0% | |
| CTAGGTACAAGATGGGAACT+TGG | + | chr1_1:73518239-73518258 | Msa0042620:intron | 45.0% | |
| AAGGGTCCAGAAAGAAGAAG+TGG | + | chr1_1:73518367-73518386 | Msa0042620:CDS | 45.0% | |
| CAACTGAAAGTGAAAGCGAC+CGG | + | chr1_1:73518421-73518440 | Msa0042620:CDS | 45.0% | |
| AACTGAAAGTGAAAGCGACC+GGG | + | chr1_1:73518422-73518441 | Msa0042620:CDS | 45.0% | |
| ACCGGGATGATAAGAAACGA+AGG | + | chr1_1:73518439-73518458 | Msa0042620:CDS | 45.0% | |
| GCCTTCGTTTCTTATCATCC+CGG | - | chr1_1:73518443-73518462 | None:intergenic | 45.0% | |
| GGGATGATAAGAAACGAAGG+CGG | + | chr1_1:73518442-73518461 | Msa0042620:CDS | 45.0% | |
| TGATAAGAAACGAAGGCGGA+AGG | + | chr1_1:73518446-73518465 | Msa0042620:CDS | 45.0% | |
| GATAAGAAACGAAGGCGGAA+GGG | + | chr1_1:73518447-73518466 | Msa0042620:CDS | 45.0% | |
| AGAAAAGAGATGGACGGTCA+AGG | + | chr1_1:73518475-73518494 | Msa0042620:CDS | 45.0% | |
| ACGGTCAAGGAGTGGTAAAA+AGG | + | chr1_1:73518488-73518507 | Msa0042620:CDS | 45.0% | |
| TCTTCTTCAGATGGCAGTGA+TGG | + | chr1_1:73518534-73518553 | Msa0042620:CDS | 45.0% | |
| AGATGGCAGTGATGGTTCTT+TGG | + | chr1_1:73518542-73518561 | Msa0042620:CDS | 45.0% | |
| GATGGCAGTGATGGTTCTTT+GGG | + | chr1_1:73518543-73518562 | Msa0042620:CDS | 45.0% | |
| AGCGGAGAGAACAAGATCAA+AGG | + | chr1_1:73518606-73518625 | Msa0042620:CDS | 45.0% | |
| ! | GCCAGCTGTTTCAGAAACAA+AGG | + | chr1_1:73518695-73518714 | Msa0042620:CDS | 45.0% |
| AAAGGAGATATTGCCAGAGG+AGG | + | chr1_1:73518713-73518732 | Msa0042620:CDS | 45.0% | |
| TTTGAACAGCTGAGGGGAAA+TGG | - | chr1_1:73518773-73518792 | None:intergenic | 45.0% | |
| GCTAGACATTTGAACAGCTG+AGG | - | chr1_1:73518781-73518800 | None:intergenic | 45.0% | |
| CGACACCAACAGATTATGAC+GGG | - | chr1_1:73518865-73518884 | None:intergenic | 45.0% | |
| ATGCTAACAAGTGCCCTTTG+TGG | + | chr1_1:73519090-73519109 | Msa0042620:intron | 45.0% | |
| ! | GGCACTTGCTAAGAAGTCAA+AGG | - | chr1_1:73519213-73519232 | None:intergenic | 45.0% |
| ACTTCTTAGCAAGTGCCCTT+AGG | + | chr1_1:73519216-73519235 | Msa0042620:intron | 45.0% | |
| CTTCTTAGCAAGTGCCCTTA+GGG | + | chr1_1:73519217-73519236 | Msa0042620:intron | 45.0% | |
| AATGCTAACAGGTGCCCTAA+GGG | - | chr1_1:73519234-73519253 | None:intergenic | 45.0% | |
| AAATGCTAACAGGTGCCCTA+AGG | - | chr1_1:73519235-73519254 | None:intergenic | 45.0% | |
| AGCCCTTATCGTAGCAAAGA+TGG | + | chr1_1:73519566-73519585 | Msa0042620:intron | 45.0% | |
| TGGAGGAGCTCTATTTAGGA+GGG | + | chr1_1:73519635-73519654 | Msa0042620:intron | 45.0% | |
| ! | GACGCCTTTTCTCAATAGGT+GGG | - | chr1_1:73519807-73519826 | None:intergenic | 45.0% |
| ! | CACCTATTGAGAAAAGGCGT+CGG | + | chr1_1:73519806-73519825 | Msa0042620:intron | 45.0% |
| ! | AACCGACGCCTTTTCTCAAT+AGG | - | chr1_1:73519811-73519830 | None:intergenic | 45.0% |
| ! | AAAGTTTTACAGCACCAGGG+AGG | - | chr1_1:73519847-73519866 | None:intergenic | 45.0% |
| GAAGTTGTTGTCGAGTGACT+AGG | - | chr1_1:73519976-73519995 | None:intergenic | 45.0% | |
| CTCATGCAGAAGAAAGCCAA+AGG | - | chr1_1:73520213-73520232 | None:intergenic | 45.0% | |
| GAAGTGGTTACGCAGAAGAA+AGG | + | chr1_1:73520590-73520609 | Msa0042620:CDS | 45.0% | |
| GAAAGGGATGGAGTTAACGT+TGG | + | chr1_1:73520607-73520626 | Msa0042620:CDS | 45.0% | |
| TTCTATCGTCCTCCCTTGTT+GGG | + | chr1_1:73520641-73520660 | Msa0042620:CDS | 45.0% | |
| AGGACAGAAGGATCTTTGCT+TGG | + | chr1_1:73520816-73520835 | Msa0042620:intron | 45.0% | |
| GTGAGAGGACCATTAGCATT+TGG | + | chr1_1:73520883-73520902 | Msa0042620:intron | 45.0% | |
| ATGTACAGGTTGTGGGAGAA+AGG | + | chr1_1:73521079-73521098 | Msa0042620:intron | 45.0% | |
| AAGGAGAGTAGTAACTCCGA+TGG | + | chr1_1:73521585-73521604 | Msa0042620:CDS | 45.0% | |
| !! | TAACTCCGATGGCTCTGTTT+TGG | + | chr1_1:73521596-73521615 | Msa0042620:CDS | 45.0% |
| TCTCCAGATGTAGACATACC+TGG | + | chr1_1:73521642-73521661 | Msa0042620:CDS | 45.0% | |
| TCACCAGGTATGTCTACATC+TGG | - | chr1_1:73521648-73521667 | None:intergenic | 45.0% | |
| GCCATGCAACTTCGTTTGAA+AGG | + | chr1_1:73521720-73521739 | Msa0042620:CDS | 45.0% | |
| TGCATACTCTCCCGTCTTAT+GGG | - | chr1_1:73521779-73521798 | None:intergenic | 45.0% | |
| ATGCATACTCTCCCGTCTTA+TGG | - | chr1_1:73521780-73521799 | None:intergenic | 45.0% | |
| CCTGCCCACCAAAACAATAA+TGG | - | chr1_1:73521928-73521947 | None:intergenic | 45.0% | |
| !!! | CCATTATTGTTTTGGTGGGC+AGG | + | chr1_1:73521925-73521944 | Msa0042620:intron | 45.0% |
| TTCTGAGCAGAAGAAAGGAG+AGG | + | chr1_1:73522352-73522371 | Msa0042620:CDS | 45.0% | |
| TGAATCAGCTACAAGAACGG+TGG | + | chr1_1:73523179-73523198 | Msa0042620:CDS | 45.0% | |
| ! | GAACGGTGGATGATAATGTG+TGG | + | chr1_1:73523193-73523212 | Msa0042620:CDS | 45.0% |
| ! | ACGGTGGATGATAATGTGTG+GGG | + | chr1_1:73523195-73523214 | Msa0042620:CDS | 45.0% |
| ATGGGGAGTAAGGGATTTGA+GGG | + | chr1_1:73523560-73523579 | Msa0042620:intron | 45.0% | |
| GTAAGGGATTTGAGGGATGT+TGG | + | chr1_1:73523567-73523586 | Msa0042620:intron | 45.0% | |
| ATTTGAGGGATGTTGGATCG+TGG | + | chr1_1:73523574-73523593 | Msa0042620:intron | 45.0% | |
| !!! | GTCAACTTTTTGGGGTGTCT+TGG | + | chr1_1:73523985-73524004 | Msa0042620:intron | 45.0% |
| ATGACCTAACTAGGAGACGA+TGG | + | chr1_1:73524081-73524100 | Msa0042620:intron | 45.0% | |
| TGACCTAACTAGGAGACGAT+GGG | + | chr1_1:73524082-73524101 | Msa0042620:intron | 45.0% | |
| ! | AGCAGGTATGCTTCACCTTT+TGG | - | chr1_1:73524122-73524141 | None:intergenic | 45.0% |
| !!! | TTTTTTTTTGGGGGGTGGGA+TGG | - | chr1_1:73524338-73524357 | None:intergenic | 45.0% |
| GAACCTGCAGAATCTGAACA+GGG | + | chr1_1:73524708-73524727 | Msa0042620:intron | 45.0% | |
| AGGAAAACAAGGTGGGTAGA+TGG | - | chr1_1:73524760-73524779 | None:intergenic | 45.0% | |
| !!! | CTACCCACCTTGTTTTCCTT+TGG | + | chr1_1:73524761-73524780 | Msa0042620:intron | 45.0% |
| GATCCCAAAGGAAAACAAGG+TGG | - | chr1_1:73524768-73524787 | None:intergenic | 45.0% | |
| ! | TGAGTCTTTTGGCATTGTGC+TGG | - | chr1_1:73524956-73524975 | None:intergenic | 45.0% |
| ! | CATTAGAGGCATGCTGCATT+TGG | + | chr1_1:73525115-73525134 | Msa0042620:CDS | 45.0% |
| ! | ACGTCAAAGGTACGAGAAAG+TGG | + | chr1_1:73525157-73525176 | Msa0042620:CDS | 45.0% |
| ! | TCAAAGGTACGAGAAAGTGG+AGG | + | chr1_1:73525160-73525179 | Msa0042620:CDS | 45.0% |
| GTGGAGAAACTAGCATCTCT+TGG | - | chr1_1:73525351-73525370 | None:intergenic | 45.0% | |
| ! | CCGGGCTTTATGAGAATCAT+AGG | + | chr1_1:73525401-73525420 | Msa0042620:three_prime_UTR | 45.0% |
| !! | AAACAAAATAAATAAATAAA+TGG | - | chr1_1:73523739-73523758 | None:intergenic | 5.0% |
| ! | AGGGGAAGAGGGAAGTTTTG+TGG | - | chr1_1:73517500-73517519 | None:intergenic | 50.0% |
| GCTGCGAAAGGAAAGAAGGA+AGG | - | chr1_1:73517580-73517599 | None:intergenic | 50.0% | |
| !! | GGTGTAGAATGGTAGTGGAG+TGG | - | chr1_1:73517603-73517622 | None:intergenic | 50.0% |
| !! | GAGACCTTGCGTTTTCGAGA+CGG | - | chr1_1:73517644-73517663 | None:intergenic | 50.0% |
| GGTACTTCGTGGTCGTATGA+GGG | - | chr1_1:73517703-73517722 | None:intergenic | 50.0% | |
| TGGTACTTCGTGGTCGTATG+AGG | - | chr1_1:73517704-73517723 | None:intergenic | 50.0% | |
| GGCTGCAAATTGGTACTTCG+TGG | - | chr1_1:73517714-73517733 | None:intergenic | 50.0% | |
| ACGATTAGGACCCCAATTGC+AGG | - | chr1_1:73517848-73517867 | None:intergenic | 50.0% | |
| GAAATTCATTCCCCGTGACC+AGG | + | chr1_1:73518114-73518133 | Msa0042620:CDS | 50.0% | |
| ACTCTACAAACCTGGTCACG+GGG | - | chr1_1:73518127-73518146 | None:intergenic | 50.0% | |
| ATGGTTCTTTGGGTCGCCAA+CGG | + | chr1_1:73518553-73518572 | Msa0042620:CDS | 50.0% | |
| GATATTGCCAGAGGAGGTTC+CGG | + | chr1_1:73518719-73518738 | Msa0042620:CDS | 50.0% | |
| TCACACCCATCCACACTGTT+TGG | - | chr1_1:73519333-73519352 | None:intergenic | 50.0% | |
| AACATGTGTGCCGAAAGACG+TGG | + | chr1_1:73519615-73519634 | Msa0042620:intron | 50.0% | |
| TAGAGCTCCTCCACGTCTTT+CGG | - | chr1_1:73519628-73519647 | None:intergenic | 50.0% | |
| GACGTGGAGGAGCTCTATTT+AGG | + | chr1_1:73519631-73519650 | Msa0042620:intron | 50.0% | |
| GTGGAGGAGCTCTATTTAGG+AGG | + | chr1_1:73519634-73519653 | Msa0042620:intron | 50.0% | |
| ! | CATCGCCTTCCACTGACTAT+TGG | - | chr1_1:73519682-73519701 | None:intergenic | 50.0% |
| ! | GTCAGTGGAAGGCGATGTTT+TGG | + | chr1_1:73519685-73519704 | Msa0042620:intron | 50.0% |
| ! | CGACGCCTTTTCTCAATAGG+TGG | - | chr1_1:73519808-73519827 | None:intergenic | 50.0% |
| GGTTACGCAGAAGAAAGGGA+TGG | + | chr1_1:73520595-73520614 | Msa0042620:CDS | 50.0% | |
| CTTCTATCGTCCTCCCTTGT+TGG | + | chr1_1:73520640-73520659 | Msa0042620:CDS | 50.0% | |
| TCTATCGTCCTCCCTTGTTG+GGG | + | chr1_1:73520642-73520661 | Msa0042620:CDS | 50.0% | |
| TACAGGTTGTGGGAGAAAGG+TGG | + | chr1_1:73521082-73521101 | Msa0042620:intron | 50.0% | |
| ACAGGTTGTGGGAGAAAGGT+GGG | + | chr1_1:73521083-73521102 | Msa0042620:intron | 50.0% | |
| ! | TTCATTTCATGGTGCCGAGG+AGG | - | chr1_1:73521420-73521439 | None:intergenic | 50.0% |
| ! | GCTTTCATTTCATGGTGCCG+AGG | - | chr1_1:73521423-73521442 | None:intergenic | 50.0% |
| !! | AAGCCAGTTTGCTGTAGCTG+AGG | + | chr1_1:73521482-73521501 | Msa0042620:CDS | 50.0% |
| !! | AGCCAGTTTGCTGTAGCTGA+GGG | + | chr1_1:73521483-73521502 | Msa0042620:CDS | 50.0% |
| TGCAAACCAGTTGGCAGCTA+AGG | + | chr1_1:73521698-73521717 | Msa0042620:CDS | 50.0% | |
| ! | ACAAGATGCATCGGCCGATT+TGG | - | chr1_1:73522590-73522609 | None:intergenic | 50.0% |
| TGCGTGTTCGGAAGTAACCT+TGG | + | chr1_1:73522914-73522933 | Msa0042620:intron | 50.0% | |
| ! | AAGCCTTATCCCACCAAGTG+GGG | - | chr1_1:73522995-73523014 | None:intergenic | 50.0% |
| ! | CAAGCCTTATCCCACCAAGT+GGG | - | chr1_1:73522996-73523015 | None:intergenic | 50.0% |
| TCAGTGTTCCATGGGGAGTA+AGG | + | chr1_1:73523550-73523569 | Msa0042620:intron | 50.0% | |
| CAGTGTTCCATGGGGAGTAA+GGG | + | chr1_1:73523551-73523570 | Msa0042620:intron | 50.0% | |
| CTCAAATCCCTTACTCCCCA+TGG | - | chr1_1:73523561-73523580 | None:intergenic | 50.0% | |
| CATGGGGAGTAAGGGATTTG+AGG | + | chr1_1:73523559-73523578 | Msa0042620:intron | 50.0% | |
| CATTGAGTCCGAGTACTCCA+TGG | - | chr1_1:73524217-73524236 | None:intergenic | 50.0% | |
| GTACTCGGACTCAATGCATG+AGG | + | chr1_1:73524221-73524240 | Msa0042620:intron | 50.0% | |
| !! | GGATGATAGTGGCACGTGTT+AGG | + | chr1_1:73524383-73524402 | Msa0042620:intron | 50.0% |
| TCTGATGATTGCGCCACATG+TGG | + | chr1_1:73524667-73524686 | Msa0042620:intron | 50.0% | |
| CGAACCTGCAGAATCTGAAC+AGG | + | chr1_1:73524707-73524726 | Msa0042620:intron | 50.0% | |
| CAACCCTGTTCAGATTCTGC+AGG | - | chr1_1:73524714-73524733 | None:intergenic | 50.0% | |
| CTACTGCCGGAGAATAGGGA+CGG | - | chr1_1:73517541-73517560 | None:intergenic | 55.0% | |
| GAAGGAAGGAGAGGTTGTGG+CGG | - | chr1_1:73517566-73517585 | None:intergenic | 55.0% | |
| ! | GTGGGCTGCGAAAGGAAAGA+AGG | - | chr1_1:73517584-73517603 | None:intergenic | 55.0% |
| CTCTCCGTCTCGAAAACGCA+AGG | + | chr1_1:73517637-73517656 | Msa0042620:five_prime_UTR | 55.0% | |
| TGGCAGTTCACGCAACAGAG+TGG | - | chr1_1:73517669-73517688 | None:intergenic | 55.0% | |
| ACTTCGTGGTCGTATGAGGG+CGG | - | chr1_1:73517700-73517719 | None:intergenic | 55.0% | |
| AGAGATGGACGGTCAAGGAG+TGG | + | chr1_1:73518480-73518499 | Msa0042620:CDS | 55.0% | |
| TCCTTAACCGGAACCTCCTC+TGG | - | chr1_1:73518729-73518748 | None:intergenic | 55.0% | |
| AGAGGAGGTTCCGGTTAAGG+AGG | + | chr1_1:73518728-73518747 | Msa0042620:CDS | 55.0% | |
| ATGTGTGCCGAAAGACGTGG+AGG | + | chr1_1:73519618-73519637 | Msa0042620:intron | 55.0% | |
| TGTTGCTGCATTGTCCTCCC+TGG | + | chr1_1:73519830-73519849 | Msa0042620:intron | 55.0% | |
| TGCTCCTCCATCCCCAACAA+GGG | - | chr1_1:73520656-73520675 | None:intergenic | 55.0% | |
| TTGCTCCTCCATCCCCAACA+AGG | - | chr1_1:73520657-73520676 | None:intergenic | 55.0% | |
| TTGGGGATGGAGGAGCAAGT+TGG | + | chr1_1:73520659-73520678 | Msa0042620:CDS | 55.0% | |
| CAAGAGCAAGCAGCTCGAGA+AGG | + | chr1_1:73520706-73520725 | Msa0042620:CDS | 55.0% | |
| AGAAGGACGAAGCTGCCAAG+AGG | + | chr1_1:73520723-73520742 | Msa0042620:CDS | 55.0% | |
| CAGGTTGTGGGAGAAAGGTG+GGG | + | chr1_1:73521084-73521103 | Msa0042620:intron | 55.0% | |
| GGAGAAAGGTGGGGTTCTCT+TGG | + | chr1_1:73521093-73521112 | Msa0042620:CDS | 55.0% | |
| ATGTAGATGAGCCCGAGCTG+GGG | - | chr1_1:73521154-73521173 | None:intergenic | 55.0% | |
| CATGTAGATGAGCCCGAGCT+GGG | - | chr1_1:73521155-73521174 | None:intergenic | 55.0% | |
| CACCCTCAGCTACAGCAAAC+TGG | - | chr1_1:73521488-73521507 | None:intergenic | 55.0% | |
| ! | TTGGTGGGCAGGAAGAAGCA+AGG | + | chr1_1:73521936-73521955 | Msa0042620:intron | 55.0% |
| ! | TGGTGGGCAGGAAGAAGCAA+GGG | + | chr1_1:73521937-73521956 | Msa0042620:intron | 55.0% |
| ACAGCAATGACCAGGCACCA+CGG | - | chr1_1:73522660-73522679 | None:intergenic | 55.0% | |
| CTTATCCCACCAAGTGGGGT+CGG | - | chr1_1:73522991-73523010 | None:intergenic | 55.0% | |
| ! | CCAAGCCTTATCCCACCAAG+TGG | - | chr1_1:73522997-73523016 | None:intergenic | 55.0% |
| ! | CCACTTGGTGGGATAAGGCT+TGG | + | chr1_1:73522994-73523013 | Msa0042620:intron | 55.0% |
| CTTGGTGGGATAAGGCTTGG+TGG | + | chr1_1:73522997-73523016 | Msa0042620:intron | 55.0% | |
| ! | TGATGGGATTGGCGCAGCAA+CGG | + | chr1_1:73523295-73523314 | Msa0042620:CDS | 55.0% |
| TGAGGGATGTTGGATCGTGG+TGG | + | chr1_1:73523577-73523596 | Msa0042620:intron | 55.0% | |
| ! | GGATGTTGGATCGTGGTGGA+GGG | + | chr1_1:73523581-73523600 | Msa0042620:intron | 55.0% |
| ! | TTGGATCGTGGTGGAGGGTT+TGG | + | chr1_1:73523586-73523605 | Msa0042620:intron | 55.0% |
| ! | TGGATCGTGGTGGAGGGTTT+GGG | + | chr1_1:73523587-73523606 | Msa0042620:intron | 55.0% |
| TGGTGGAGGGTTTGGGGAAA+TGG | + | chr1_1:73523594-73523613 | Msa0042620:intron | 55.0% | |
| TGGCCCATCGTCTCCTAGTT+AGG | - | chr1_1:73524088-73524107 | None:intergenic | 55.0% | |
| CTCGGACTCAATGCATGAGG+TGG | + | chr1_1:73524224-73524243 | Msa0042620:intron | 55.0% | |
| AGGCATGCTGCATTTGGCTG+AGG | + | chr1_1:73525121-73525140 | Msa0042620:CDS | 55.0% | |
| TTCCCTCTTCCCCTCCTACC+AGG | + | chr1_1:73517506-73517525 | Msa0042620:five_prime_UTR | 60.0% | |
| AGCCTGGTAGGAGGGGAAGA+GGG | - | chr1_1:73517511-73517530 | None:intergenic | 60.0% | |
| TGCCGGAGAATAGGGACGGT+GGG | - | chr1_1:73517537-73517556 | None:intergenic | 60.0% | |
| GGCGCTACTGCCGGAGAATA+GGG | - | chr1_1:73517545-73517564 | None:intergenic | 60.0% | |
| !! | GTAGTGGAGTGGGCTGCGAA+AGG | - | chr1_1:73517592-73517611 | None:intergenic | 60.0% |
| GCCAGAGGAGGTTCCGGTTA+AGG | + | chr1_1:73518725-73518744 | Msa0042620:CDS | 60.0% | |
| TCGTCCTCCCTTGTTGGGGA+TGG | + | chr1_1:73520646-73520665 | Msa0042620:CDS | 60.0% | |
| TCCTCCCTTGTTGGGGATGG+AGG | + | chr1_1:73520649-73520668 | Msa0042620:CDS | 60.0% | |
| TCCTCCATCCCCAACAAGGG+AGG | - | chr1_1:73520653-73520672 | None:intergenic | 60.0% | |
| CTAAAGCAGCTGCCCCAGCT+CGG | + | chr1_1:73521139-73521158 | Msa0042620:CDS | 60.0% | |
| TAAAGCAGCTGCCCCAGCTC+GGG | + | chr1_1:73521140-73521159 | Msa0042620:CDS | 60.0% | |
| GCATGTAGATGAGCCCGAGC+TGG | - | chr1_1:73521156-73521175 | None:intergenic | 60.0% | |
| ! | GCATGGCCTTAGCTGCCAAC+TGG | - | chr1_1:73521707-73521726 | None:intergenic | 60.0% |
| CAGCAATGACCAGGCACCAC+GGG | - | chr1_1:73522659-73522678 | None:intergenic | 60.0% | |
| TCCATGTAGCCGACCCCACT+TGG | + | chr1_1:73522979-73522998 | Msa0042620:intron | 60.0% | |
| ACCAAGTGGGGTCGGCTACA+TGG | - | chr1_1:73522983-73523002 | None:intergenic | 60.0% | |
| ATGTAGCCGACCCCACTTGG+TGG | + | chr1_1:73522982-73523001 | Msa0042620:intron | 60.0% | |
| TGTAGCCGACCCCACTTGGT+GGG | + | chr1_1:73522983-73523002 | Msa0042620:intron | 60.0% | |
| ! | CGACCCCACTTGGTGGGATA+AGG | + | chr1_1:73522989-73523008 | Msa0042620:intron | 60.0% |
| !! | GCAGCAACGGAGGCATTGCA+TGG | + | chr1_1:73523308-73523327 | Msa0042620:CDS | 60.0% |
| GGGATGTTGGATCGTGGTGG+AGG | + | chr1_1:73523580-73523599 | Msa0042620:intron | 60.0% | |
| ! | GGATCGTGGTGGAGGGTTTG+GGG | + | chr1_1:73523588-73523607 | Msa0042620:intron | 60.0% |
| CAGCCTGGTAGGAGGGGAAG+AGG | - | chr1_1:73517512-73517531 | None:intergenic | 65.0% | |
| CCGGAGAATAGGGACGGTGG+GGG | - | chr1_1:73517535-73517554 | None:intergenic | 65.0% | |
| CCCCCACCGTCCCTATTCTC+CGG | + | chr1_1:73517532-73517551 | Msa0042620:five_prime_UTR | 65.0% | |
| GCCGGAGAATAGGGACGGTG+GGG | - | chr1_1:73517536-73517555 | None:intergenic | 65.0% | |
| CTGCCGGAGAATAGGGACGG+TGG | - | chr1_1:73517538-73517557 | None:intergenic | 65.0% | |
| CGGCGCTACTGCCGGAGAAT+AGG | - | chr1_1:73517546-73517565 | None:intergenic | 65.0% | |
| ! | GTATGAGGGCGGAGGCGCAA+TGG | - | chr1_1:73517689-73517708 | None:intergenic | 65.0% |
| TCGTGGTCGTATGAGGGCGG+AGG | - | chr1_1:73517697-73517716 | None:intergenic | 65.0% | |
| ! | TGGGATTGGCGCAGCAACGG+AGG | + | chr1_1:73523298-73523317 | Msa0042620:CDS | 65.0% |
| TGGGGGCAGCCTGGTAGGAG+GGG | - | chr1_1:73517518-73517537 | None:intergenic | 70.0% | |
| GTGGGGGCAGCCTGGTAGGA+GGG | - | chr1_1:73517519-73517538 | None:intergenic | 70.0% | |
| GGTTGTGGCGGCGCTACTGC+CGG | - | chr1_1:73517554-73517573 | None:intergenic | 70.0% | |
| GTTGCCACAGTGGCAGCCCG+TGG | + | chr1_1:73522640-73522659 | Msa0042620:CDS | 70.0% | |
| GGTGGGGGCAGCCTGGTAGG+AGG | - | chr1_1:73517520-73517539 | None:intergenic | 75.0% | |
| GACGGTGGGGGCAGCCTGGT+AGG | - | chr1_1:73517523-73517542 | None:intergenic | 75.0% | |
| TAGGGACGGTGGGGGCAGCC+TGG | - | chr1_1:73517527-73517546 | None:intergenic | 75.0% | |
| ! | GGCACCACGGGCTGCCACTG+TGG | - | chr1_1:73522647-73522666 | None:intergenic | 75.0% |
| CAGTGGCAGCCCGTGGTGCC+TGG | + | chr1_1:73522647-73522666 | Msa0042620:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 73517450 | 73525543 | 73517450 | ID=Msa0042620;Name=Msa0042620 |
| chr1_1 | mRNA | 73517450 | 73525543 | 73517450 | ID=Msa0042620-mRNA-1;Parent=Msa0042620;Name=Msa0042620-mRNA-1;_AED=0.03;_eAED=0.03;_QI=338|1|1|1|0.88|0.8|10|281|762 |
| chr1_1 | exon | 73517450 | 73517759 | 73517450 | ID=Msa0042620-mRNA-1:exon:24626;Parent=Msa0042620-mRNA-1 |
| chr1_1 | exon | 73518072 | 73518135 | 73518072 | ID=Msa0042620-mRNA-1:exon:24627;Parent=Msa0042620-mRNA-1 |
| chr1_1 | exon | 73518243 | 73518749 | 73518243 | ID=Msa0042620-mRNA-1:exon:24628;Parent=Msa0042620-mRNA-1 |
| chr1_1 | exon | 73520541 | 73520744 | 73520541 | ID=Msa0042620-mRNA-1:exon:24629;Parent=Msa0042620-mRNA-1 |
| chr1_1 | exon | 73521087 | 73521254 | 73521087 | ID=Msa0042620-mRNA-1:exon:24630;Parent=Msa0042620-mRNA-1 |
| chr1_1 | exon | 73521399 | 73521770 | 73521399 | ID=Msa0042620-mRNA-1:exon:24631;Parent=Msa0042620-mRNA-1 |
| chr1_1 | exon | 73521947 | 73522032 | 73521947 | ID=Msa0042620-mRNA-1:exon:24632;Parent=Msa0042620-mRNA-1 |
| chr1_1 | exon | 73522331 | 73522694 | 73522331 | ID=Msa0042620-mRNA-1:exon:24633;Parent=Msa0042620-mRNA-1 |
| chr1_1 | exon | 73523177 | 73523389 | 73523177 | ID=Msa0042620-mRNA-1:exon:24634;Parent=Msa0042620-mRNA-1 |
| chr1_1 | exon | 73524924 | 73525543 | 73524924 | ID=Msa0042620-mRNA-1:exon:24635;Parent=Msa0042620-mRNA-1 |
| chr1_1 | five_prime_UTR | 73517450 | 73517759 | 73517450 | ID=Msa0042620-mRNA-1:five_prime_utr;Parent=Msa0042620-mRNA-1 |
| chr1_1 | five_prime_UTR | 73518072 | 73518099 | 73518072 | ID=Msa0042620-mRNA-1:five_prime_utr;Parent=Msa0042620-mRNA-1 |
| chr1_1 | CDS | 73518100 | 73518135 | 73518100 | ID=Msa0042620-mRNA-1:cds;Parent=Msa0042620-mRNA-1 |
| chr1_1 | CDS | 73518243 | 73518749 | 73518243 | ID=Msa0042620-mRNA-1:cds;Parent=Msa0042620-mRNA-1 |
| chr1_1 | CDS | 73520541 | 73520744 | 73520541 | ID=Msa0042620-mRNA-1:cds;Parent=Msa0042620-mRNA-1 |
| chr1_1 | CDS | 73521087 | 73521254 | 73521087 | ID=Msa0042620-mRNA-1:cds;Parent=Msa0042620-mRNA-1 |
| chr1_1 | CDS | 73521399 | 73521770 | 73521399 | ID=Msa0042620-mRNA-1:cds;Parent=Msa0042620-mRNA-1 |
| chr1_1 | CDS | 73521947 | 73522032 | 73521947 | ID=Msa0042620-mRNA-1:cds;Parent=Msa0042620-mRNA-1 |
| chr1_1 | CDS | 73522331 | 73522694 | 73522331 | ID=Msa0042620-mRNA-1:cds;Parent=Msa0042620-mRNA-1 |
| chr1_1 | CDS | 73523177 | 73523389 | 73523177 | ID=Msa0042620-mRNA-1:cds;Parent=Msa0042620-mRNA-1 |
| chr1_1 | CDS | 73524924 | 73525262 | 73524924 | ID=Msa0042620-mRNA-1:cds;Parent=Msa0042620-mRNA-1 |
| chr1_1 | three_prime_UTR | 73525263 | 73525543 | 73525263 | ID=Msa0042620-mRNA-1:three_prime_utr;Parent=Msa0042620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
