AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0178570


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0178570 MtrunA17_Chr1g0208311 95.312 768 29 2 1 762 1 767 0.0 1337
Msa0178570 MtrunA17_Chr4g0071211 24.111 253 185 5 502 753 202 448 5.82e-14 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0178570 AT1G56290.1 51.847 785 259 19 1 759 1 692 0.0 733
Msa0178570 AT5G56900.3 27.237 257 168 8 502 753 258 500 4.71e-15 79.3
Msa0178570 AT5G56900.1 27.237 257 168 8 502 753 159 401 7.84e-15 77.8
Msa0178570 AT5G56900.2 27.237 257 168 8 502 753 351 593 9.71e-15 78.6

Find 220 sgRNAs with CRISPR-Local

Find 659 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAATACCACTTCTTCTTTC+TGG 0.127155 1_4:-65917359 None:intergenic
CATTGGTAATATGCTGATTT+TGG 0.157883 1_4:-65925191 None:intergenic
AATGCAGAACAAGCAGTTTA+AGG 0.165236 1_4:+65922171 Msa0178570:CDS
TAAATCTAGAAAATGCTTTC+TGG 0.175819 1_4:+65917077 Msa0178570:exon
GATAATGAATCTTGCACTTT+AGG 0.203429 1_4:-65921209 None:intergenic
AGATGGCAGTGATGGTTCTT+TGG 0.217013 1_4:+65917528 Msa0178570:CDS
AAAAGAGGCAACGTTCTTTC+TGG 0.231869 1_4:-65922318 None:intergenic
CTTTAGGTGCTTTCATTTCA+TGG 0.232601 1_4:-65921193 None:intergenic
CTATCCAACGGGATTCTAAA+AGG 0.246272 1_4:+65920995 Msa0178570:CDS
TTCTATCGTCCTCCCTTGTT+GGG 0.271017 1_4:+65920404 Msa0178570:CDS
AGCCTCTTTAGCAACATCTT+TGG 0.273963 1_4:-65923114 None:intergenic
TTAACTCCATCCCTTTCTTC+TGG 0.275995 1_4:-65920364 None:intergenic
CCAAATTCTACATGAAAATA+AGG 0.288504 1_4:-65924785 None:intergenic
GTCAAAATGATCCCAGTCTT+TGG 0.291825 1_4:-65924972 None:intergenic
GCCTCTTTAGCAACATCTTT+GGG 0.302529 1_4:-65923113 None:intergenic
ATCAGATATTAGGAGGAAAA+AGG 0.309597 1_4:+65917279 Msa0178570:CDS
ACAAGATGCATCGGCCGATT+TGG 0.310653 1_4:-65922352 None:intergenic
CGGCGCTACTGCCGGAGAAT+AGG 0.311731 1_4:-65916528 None:intergenic
TAACTCCGATGGCTCTGTTT+TGG 0.313770 1_4:+65921361 Msa0178570:CDS
CTTCTATCGTCCTCCCTTGT+TGG 0.323231 1_4:+65920403 Msa0178570:CDS
TGAAATAGTTGCTATGTAAT+AGG 0.326984 1_4:+65925212 Msa0178570:three_prime_UTR
TGGTACTTCGTGGTCGTATG+AGG 0.340347 1_4:-65916686 None:intergenic
CGATATTGCAAGAAAAGAAA+TGG 0.349250 1_4:+65917624 Msa0178570:CDS
ACTCGTATCAATGAGTCTTT+TGG 0.351937 1_4:-65924726 None:intergenic
CTGACCTTCTTAAAGTATAA+AGG 0.363032 1_4:-65923137 None:intergenic
CAGCCTGGTAGGAGGGGAAG+AGG 0.363455 1_4:-65916494 None:intergenic
AAATCTAGAAAATGCTTTCT+GGG 0.367835 1_4:+65917078 Msa0178570:exon
TTAAATAAATTTGCTAATGA+TGG 0.373787 1_4:+65921302 Msa0178570:CDS
GATGGCAGTGATGGTTCTTT+GGG 0.376486 1_4:+65917529 Msa0178570:CDS
ATTTGTTGGAGGCTGCAAAT+TGG 0.377228 1_4:-65916706 None:intergenic
TTACATAGCAACTATTTCAT+TGG 0.378411 1_4:-65925208 None:intergenic
AAGGAGTTTAAGAGTAGTCT+TGG 0.378970 1_4:+65924845 Msa0178570:CDS
TAACTCCATCCCTTTCTTCT+GGG 0.389734 1_4:-65920363 None:intergenic
GGCGCTACTGCCGGAGAATA+GGG 0.390340 1_4:-65916527 None:intergenic
CTTCCATCATCCTTTAGATA+AGG 0.393080 1_4:-65920334 None:intergenic
CATTAGAGGCATGCTGCATT+TGG 0.401828 1_4:+65924877 Msa0178570:CDS
AGAAATTAAACTCACGTGAA+TGG 0.401995 1_4:-65922452 None:intergenic
CTTGGGTTGAATGTCATTAG+AGG 0.406348 1_4:+65924863 Msa0178570:CDS
TAGTGGTAGTTTCAATTTGT+TGG 0.408991 1_4:-65916720 None:intergenic
ACGGAGAGAAAACTAATAGA+AGG 0.409896 1_4:-65916607 None:intergenic
CAGTGGCAGCCCGTGGTGCC+TGG 0.410325 1_4:+65922412 Msa0178570:CDS
CACCCTCAGCTACAGCAAAC+TGG 0.415469 1_4:-65921250 None:intergenic
GATATTGCCAGAGGAGGTTC+CGG 0.417230 1_4:+65917705 Msa0178570:CDS
AAAGAGGCAACGTTCTTTCT+GGG 0.420692 1_4:-65922317 None:intergenic
AAGTGCAAGATTCATTATCT+TGG 0.421374 1_4:+65921213 Msa0178570:CDS
CAAAAGTCATGTTCAAAAGA+TGG 0.422563 1_4:+65917568 Msa0178570:CDS
GGAGAAAGGTGGGGTTCTCT+TGG 0.424757 1_4:+65920856 Msa0178570:CDS
TCCTTTGTTTCTGAAACAGC+TGG 0.426347 1_4:-65917682 None:intergenic
GCCAGAGGAGGTTCCGGTTG+AGG 0.427345 1_4:+65917711 Msa0178570:CDS
CCGGGCTTTATGAGAATCAT+AGG 0.428496 1_4:+65925163 Msa0178570:three_prime_UTR
CTAAGACATACCTCCTCAAC+CGG 0.430215 1_4:-65917724 None:intergenic
GCATGGCCTTAGCTGCCAAC+TGG 0.432433 1_4:-65921469 None:intergenic
TCCTCAACCGGAACCTCCTC+TGG 0.432540 1_4:-65917712 None:intergenic
TAAAGCAGCTGCACCAGCTC+GGG 0.436695 1_4:+65920903 Msa0178570:CDS
TGGATAGGCTTATCAGAATC+TGG 0.438375 1_4:-65920979 None:intergenic
AACTAGCATCTCTTGGCAAT+TGG 0.448076 1_4:-65925103 None:intergenic
TCTTCTTCAGATGGCAGTGA+TGG 0.448835 1_4:+65917520 Msa0178570:CDS
GAAATTAAACTCACGTGAAT+GGG 0.449576 1_4:-65922451 None:intergenic
GGCTCCTTTATACTTTAAGA+AGG 0.451038 1_4:+65923133 Msa0178570:CDS
TCGTCCTCCCTTGTTGGGGA+TGG 0.451524 1_4:+65920409 Msa0178570:CDS
TTAGCAACATCTTTGGGTAC+AGG 0.452375 1_4:-65923107 None:intergenic
ATGAAAATAAGGAAAGTCCT+TGG 0.453332 1_4:-65924774 None:intergenic
AGAAGGGTGTAGAATGGTAG+TGG 0.454953 1_4:-65916590 None:intergenic
TGCAAACCAGTTGGCAGCTA+AGG 0.457599 1_4:+65921463 Msa0178570:CDS
AGATAAGGATTCAATTCCTT+AGG 0.459784 1_4:-65920319 None:intergenic
TTCTGATAAGCCTATCCAAC+GGG 0.465145 1_4:+65920984 Msa0178570:CDS
ACCCAAAGATGTTGCTAAAG+AGG 0.465690 1_4:+65923112 Msa0178570:CDS
TGCAAGAAAAGAAATGGGAT+TGG 0.466865 1_4:+65917630 Msa0178570:CDS
AACTCTACAAACCTGGTCAC+GGG 0.470379 1_4:-65917114 None:intergenic
TGGTAGTTTCAATTTGTTGG+AGG 0.472309 1_4:-65916717 None:intergenic
AGGGAAGTTCTAGTTCTAGA+AGG 0.477096 1_4:+65921776 Msa0178570:CDS
TGAAGAAGCTGATAGACTAA+TGG 0.482397 1_4:+65921514 Msa0178570:CDS
TTCCCTCTTCCCCTCCTACC+AGG 0.484449 1_4:+65916491 Msa0178570:five_prime_UTR
TGATTGATTGATTACCTTAG+TGG 0.484499 1_4:-65916737 None:intergenic
GAAAAGAAATGGGATTGGAT+TGG 0.486728 1_4:+65917635 Msa0178570:CDS
CTAGGTACAAGATGGGAACT+TGG 0.486887 1_4:+65917225 Msa0178570:intron
TGAAAATAAGGAAAGTCCTT+GGG 0.489950 1_4:-65924773 None:intergenic
GGTTGTGGCGGCGCTACTGC+CGG 0.490345 1_4:-65916536 None:intergenic
TCACCAGGTATGTCTACATC+TGG 0.490912 1_4:-65921410 None:intergenic
TTTGTCTAGAAAATCCAAAT+CGG 0.491417 1_4:+65922338 Msa0178570:CDS
GGCTGCAAATTGGTACTTCG+TGG 0.491562 1_4:-65916696 None:intergenic
AATCCTTATCTAAAGGATGA+TGG 0.493135 1_4:+65920331 Msa0178570:CDS
ACAGGTTGTGGGAGAAAGGT+GGG 0.494592 1_4:+65920846 Msa0178570:intron
AAAGAAGGAAGGAGAGGTTG+TGG 0.498892 1_4:-65916551 None:intergenic
AGGAGTTTAAGAGTAGTCTT+GGG 0.500080 1_4:+65924846 Msa0178570:CDS
CAATATAACTCGTTTATGCC+CGG 0.500626 1_4:+65925144 Msa0178570:three_prime_UTR
ACGGTCAAGGAGTGGTAAAA+AGG 0.500765 1_4:+65917474 Msa0178570:CDS
GATATTGCAAGAAAAGAAAT+GGG 0.506087 1_4:+65917625 Msa0178570:CDS
AAAAGTCATGTTCAAAAGAT+GGG 0.506136 1_4:+65917569 Msa0178570:CDS
GGAATTGAATCCTTATCTAA+AGG 0.506348 1_4:+65920324 Msa0178570:CDS
GAAATTCATTCCCCGTGACC+AGG 0.508309 1_4:+65917103 Msa0178570:CDS
TCTTGAAACTGTGATGGGAT+TGG 0.510705 1_4:+65923049 Msa0178570:CDS
ACGTACAGGTTGTGGGAGAA+AGG 0.512724 1_4:+65920842 Msa0178570:intron
TCCTTTCAAACGAAGTTGCA+TGG 0.513085 1_4:-65921486 None:intergenic
GTGTAGAATGGTAGTGGAGT+GGG 0.514840 1_4:-65916584 None:intergenic
TACAAGATGGGAACTTGGAT+AGG 0.515554 1_4:+65917230 Msa0178570:CDS
TGCCGGAGAATAGGGACGGT+GGG 0.515824 1_4:-65916519 None:intergenic
GGTACTTCGTGGTCGTATGA+GGG 0.516203 1_4:-65916685 None:intergenic
GCCATGCAACTTCGTTTGAA+AGG 0.516217 1_4:+65921485 Msa0178570:CDS
TCCTCCCTTGTTGGGGATGG+AGG 0.516820 1_4:+65920412 Msa0178570:CDS
CTAAAGCAGCTGCACCAGCT+CGG 0.518101 1_4:+65920902 Msa0178570:CDS
GAAGTGGTTACCCAGAAGAA+AGG 0.519164 1_4:+65920353 Msa0178570:CDS
GCCTTCGTTTCTTATCATCC+CGG 0.519609 1_4:-65917426 None:intergenic
CCATGTTATTGATGATGAAA+AGG 0.522343 1_4:+65924826 Msa0178570:CDS
TGTATATACTAGGTACAAGA+TGG 0.525351 1_4:+65917217 Msa0178570:intron
GTGGAGAAACTAGCATCTCT+TGG 0.526001 1_4:-65925110 None:intergenic
GCCAGCTGTTTCAGAAACAA+AGG 0.526710 1_4:+65917681 Msa0178570:CDS
ATATCTTCTGAGCAGAAGAA+AGG 0.527325 1_4:+65922112 Msa0178570:CDS
CCTATGATTCTCATAAAGCC+CGG 0.528167 1_4:-65925163 None:intergenic
GCAGTTTAAGGTTTATACTC+AGG 0.528525 1_4:+65922183 Msa0178570:CDS
ACGTCAAAGGTACGAGAAAG+TGG 0.530885 1_4:+65924919 Msa0178570:CDS
TATCCAACGGGATTCTAAAA+GGG 0.536857 1_4:+65920996 Msa0178570:CDS
CAACTGAAAGTGAAAGCGAC+CGG 0.538228 1_4:+65917407 Msa0178570:CDS
GTCAAAGAAGGCAAATCCTA+AGG 0.538930 1_4:+65920303 Msa0178570:intron
GTAGAATTTGGTCTAAACAA+AGG 0.541254 1_4:+65924797 Msa0178570:CDS
GAAGACTCTTCTTCTTCAGA+TGG 0.541678 1_4:+65917511 Msa0178570:CDS
GCAGCAACGGAGGCATTGCA+TGG 0.542294 1_4:+65923073 Msa0178570:CDS
CAGCAATGACCAGGCACCAC+GGG 0.542710 1_4:-65922421 None:intergenic
CCGGAGAATAGGGACGGTGG+GGG 0.543170 1_4:-65916517 None:intergenic
TGATGGGATTGGCGCAGCAA+CGG 0.543497 1_4:+65923060 Msa0178570:CDS
ACAAATTGAAACTACCACTA+AGG 0.544779 1_4:+65916723 Msa0178570:five_prime_UTR
ACTAATAGAAGGGTGTAGAA+TGG 0.546084 1_4:-65916596 None:intergenic
TATGGATACGTACAGGTTGT+GGG 0.551919 1_4:+65920835 Msa0178570:intron
CTCATTGATACGAGTCAGAA+GGG 0.552831 1_4:+65924734 Msa0178570:CDS
AATATAACTCGTTTATGCCC+GGG 0.554488 1_4:+65925145 Msa0178570:three_prime_UTR
AGGCATGCTGCATTTGGCTG+AGG 0.559862 1_4:+65924883 Msa0178570:CDS
TAACTCTACAAACCTGGTCA+CGG 0.560136 1_4:-65917115 None:intergenic
AAGTGGTTACCCAGAAGAAA+GGG 0.560758 1_4:+65920354 Msa0178570:CDS
AGCCTGGTAGGAGGGGAAGA+GGG 0.561409 1_4:-65916493 None:intergenic
TATCTAAAGGATGATGGAAG+TGG 0.562789 1_4:+65920337 Msa0178570:CDS
TCTATCGTCCTCCCTTGTTG+GGG 0.563715 1_4:+65920405 Msa0178570:CDS
GAAATTAGATCAAGAACTGA+GGG 0.565433 1_4:+65921757 Msa0178570:CDS
GTGGGCTGCGAAAGGAAAGA+AGG 0.566263 1_4:-65916566 None:intergenic
TGATAAGAAACGAAGGCGGA+AGG 0.566477 1_4:+65917432 Msa0178570:CDS
TATGCGTGAGTTAGTTAGCA+AGG 0.567223 1_4:+65921331 Msa0178570:CDS
GTATGAGGGCGGAGGCGCAA+TGG 0.569010 1_4:-65916671 None:intergenic
GATGAATATGACTTTGAGAC+TGG 0.570613 1_4:+65922211 Msa0178570:CDS
ATGGTTCTTTGGGTCGCCAA+CGG 0.574425 1_4:+65917539 Msa0178570:CDS
AAGATATGTGAAATTTGCAA+TGG 0.574800 1_4:-65922380 None:intergenic
CTCTCCGTCTCGAAAACGCA+AGG 0.577826 1_4:+65916622 Msa0178570:five_prime_UTR
TCGTGGTCGTATGAGGGCGG+AGG 0.578997 1_4:-65916679 None:intergenic
ACAAGATGGGAACTTGGATA+GGG 0.579294 1_4:+65917231 Msa0178570:CDS
TTCATTTCATGGTGCCGAGG+AGG 0.579484 1_4:-65921182 None:intergenic
TTGCTCCTCCATCCCCAACA+AGG 0.579676 1_4:-65920417 None:intergenic
GCATGTAGATGAGCCCGAGC+TGG 0.580752 1_4:-65920916 None:intergenic
TACAGGTTGTGGGAGAAAGG+TGG 0.581114 1_4:+65920845 Msa0178570:intron
AGTGTTTCTTGAAACTGTGA+TGG 0.581708 1_4:+65923043 Msa0178570:CDS
AACTGAAAGTGAAAGCGACC+GGG 0.581958 1_4:+65917408 Msa0178570:CDS
CTATAAGAAGCAGACAAAGA+GGG 0.582737 1_4:+65920938 Msa0178570:CDS
AAGCCAGTTTGCTGTAGCTG+AGG 0.582994 1_4:+65921247 Msa0178570:CDS
TTGGGGATGGAGGAGCAAGT+TGG 0.583549 1_4:+65920422 Msa0178570:CDS
AGAAAAGAGATGGACGGTCA+AGG 0.584062 1_4:+65917461 Msa0178570:CDS
TGCGTAAGTCTGAAAGTAAG+AGG 0.585368 1_4:+65917659 Msa0178570:CDS
TGGGATTGGCGCAGCAACGG+AGG 0.587679 1_4:+65923063 Msa0178570:CDS
TTGGTGGGCAGGAAGAAGCA+AGG 0.587839 1_4:+65921701 Msa0178570:intron
GCCGGAGAATAGGGACGGTG+GGG 0.591368 1_4:-65916518 None:intergenic
TTATATTGTTACATTACATG+TGG 0.592631 1_4:-65925129 None:intergenic
TTGATGAAGCAGAAGATGAG+TGG 0.593008 1_4:+65924690 Msa0178570:CDS
ACTCATTGATACGAGTCAGA+AGG 0.593762 1_4:+65924733 Msa0178570:CDS
GGTGTAGAATGGTAGTGGAG+TGG 0.594123 1_4:-65916585 None:intergenic
CTATGATTCTCATAAAGCCC+GGG 0.596074 1_4:-65925162 None:intergenic
ACTTTCCAAAACAGAGCCAT+CGG 0.600722 1_4:-65921366 None:intergenic
TGGTGGGCAGGAAGAAGCAA+GGG 0.600781 1_4:+65921702 Msa0178570:intron
GCTATAAGAAGCAGACAAAG+AGG 0.602039 1_4:+65920937 Msa0178570:CDS
AGCCAGTTTGCTGTAGCTGA+GGG 0.602459 1_4:+65921248 Msa0178570:CDS
AGCGGAGAGAACAAGATCAA+AGG 0.603131 1_4:+65917592 Msa0178570:CDS
AACGGTGGATGATAATGTGT+GGG 0.603348 1_4:+65922959 Msa0178570:CDS
AAGGGTCCAGAAAGAAGAAG+TGG 0.604306 1_4:+65917353 Msa0178570:CDS
GATAAGAAACGAAGGCGGAA+GGG 0.605462 1_4:+65917433 Msa0178570:CDS
TGCTCCTCCATCCCCAACAA+GGG 0.605665 1_4:-65920416 None:intergenic
GTAGTGGAGTGGGCTGCGAA+AGG 0.608639 1_4:-65916574 None:intergenic
CAAGAGCAAGCAGCTCGAGA+AGG 0.610525 1_4:+65920469 Msa0178570:CDS
TGAAATTAGATCAAGAACTG+AGG 0.611462 1_4:+65921756 Msa0178570:CDS
CGGAGAGAAAACTAATAGAA+GGG 0.611734 1_4:-65916606 None:intergenic
TCATGTTCAAAAGATGGGAG+CGG 0.612238 1_4:+65917574 Msa0178570:CDS
ATGGACACAACAAGATGCAT+CGG 0.612414 1_4:-65922361 None:intergenic
TAACATGAGTGCAAACCAGT+TGG 0.614285 1_4:+65921454 Msa0178570:CDS
TCTCCAGATGTAGACATACC+TGG 0.614683 1_4:+65921407 Msa0178570:CDS
CTGCCGGAGAATAGGGACGG+TGG 0.618206 1_4:-65916520 None:intergenic
AATCTAGAAAATGCTTTCTG+GGG 0.620178 1_4:+65917079 Msa0178570:exon
ATTCAAGGTATGCTATGCAG+AGG 0.622462 1_4:+65922089 Msa0178570:intron
AGAGGAGGTTCCGGTTGAGG+AGG 0.624945 1_4:+65917714 Msa0178570:CDS
GCTTTCATTTCATGGTGCCG+AGG 0.628763 1_4:-65921185 None:intergenic
CATATCTTATGTTGCCACAG+TGG 0.629694 1_4:+65922395 Msa0178570:CDS
GGCACCACGGGCTGCCACTG+TGG 0.630244 1_4:-65922409 None:intergenic
GTATATACTAGGTACAAGAT+GGG 0.630548 1_4:+65917218 Msa0178570:intron
GTGTTTCTTGAAACTGTGAT+GGG 0.635016 1_4:+65923044 Msa0178570:CDS
GTTTAAGGTTTATACTCAGG+CGG 0.637491 1_4:+65922186 Msa0178570:CDS
TTTACGCAACTCAATTCCCA+AGG 0.639849 1_4:+65924757 Msa0178570:CDS
TATAAGAAGCAGACAAAGAG+GGG 0.639918 1_4:+65920939 Msa0178570:CDS
GTTGCCACAGTGGCAGCCCG+TGG 0.646274 1_4:+65922405 Msa0178570:CDS
TCCTCCATCCCCAACAAGGG+AGG 0.647544 1_4:-65920413 None:intergenic
ACTCTACAAACCTGGTCACG+GGG 0.649268 1_4:-65917113 None:intergenic
GGTTACCCAGAAGAAAGGGA+TGG 0.651690 1_4:+65920358 Msa0178570:CDS
GCATGAATCAGCTACAAGAA+CGG 0.655856 1_4:+65922941 Msa0178570:intron
GAAAGGGATGGAGTTAACGT+TGG 0.656584 1_4:+65920370 Msa0178570:CDS
AAAGGAGATATTGCCAGAGG+AGG 0.656762 1_4:+65917699 Msa0178570:CDS
AGAGATGGACGGTCAAGGAG+TGG 0.659421 1_4:+65917466 Msa0178570:CDS
AAGGAGAGTAGTAACTCCGA+TGG 0.660069 1_4:+65921350 Msa0178570:CDS
GGTAAAATACAGCAATGACC+AGG 0.660836 1_4:-65922430 None:intergenic
ATTCTGATAAGCCTATCCAA+CGG 0.661452 1_4:+65920983 Msa0178570:CDS
GAAAGGAAAGAAGGAAGGAG+AGG 0.661803 1_4:-65916557 None:intergenic
CTACTGCCGGAGAATAGGGA+CGG 0.665267 1_4:-65916523 None:intergenic
TTCTGAGCAGAAGAAAGGAG+AGG 0.665761 1_4:+65922117 Msa0178570:CDS
CAGGTTGTGGGAGAAAGGTG+GGG 0.667439 1_4:+65920847 Msa0178570:intron
GCTGCGAAAGGAAAGAAGGA+AGG 0.667850 1_4:-65916562 None:intergenic
AAGACATGTATAGACGTCAA+AGG 0.668527 1_4:+65924906 Msa0178570:CDS
GAAGGAAGGAGAGGTTGTGG+CGG 0.671872 1_4:-65916548 None:intergenic
TGGCAGTTCACGCAACAGAG+TGG 0.672423 1_4:-65916651 None:intergenic
ACAGCAATGACCAGGCACCA+CGG 0.673584 1_4:-65922422 None:intergenic
ACTTCGTGGTCGTATGAGGG+CGG 0.680013 1_4:-65916682 None:intergenic
AACAAAGGAGATATTGCCAG+AGG 0.685554 1_4:+65917696 Msa0178570:CDS
TGAATCAGCTACAAGAACGG+TGG 0.687115 1_4:+65922944 Msa0178570:CDS
ACCGGGATGATAAGAAACGA+AGG 0.693258 1_4:+65917425 Msa0178570:CDS
AGAAGGACGAAGCTGCCAAG+AGG 0.694798 1_4:+65920486 Msa0178570:CDS
AAGAGTAGAAAGAAGCAAGG+AGG 0.698813 1_4:+65922244 Msa0178570:CDS
GAACGGTGGATGATAATGTG+TGG 0.714664 1_4:+65922958 Msa0178570:CDS
ACGGTGGATGATAATGTGTG+GGG 0.723750 1_4:+65922960 Msa0178570:CDS
TCAAAGGTACGAGAAAGTGG+AGG 0.744298 1_4:+65924922 Msa0178570:CDS
GGGATGATAAGAAACGAAGG+CGG 0.769963 1_4:+65917428 Msa0178570:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTTAAAAAATTGAACA+TGG - chr1_4:65916970-65916989 None:intergenic 10.0%
!!! AATTTTAAAGATAGATAAAA+AGG + chr1_4:65917894-65917913 Msa0178570:intron 10.0%
!!! ATTTTAAAGATAGATAAAAA+GGG + chr1_4:65917895-65917914 Msa0178570:intron 10.0%
!!! TATTTTCAAAAAAAACAATA+CGG - chr1_4:65919811-65919830 None:intergenic 10.0%
!!! AATCAAAATACTATTTCTTA+GGG + chr1_4:65916759-65916778 Msa0178570:intron 15.0%
!! AACACGAATAAATTAATTAA+TGG - chr1_4:65917032-65917051 None:intergenic 15.0%
!! AAAGAAAAAAATCAGATATT+AGG + chr1_4:65917269-65917288 Msa0178570:CDS 15.0%
!!! TCTATTTGATAACAAAATAA+GGG - chr1_4:65918779-65918798 None:intergenic 15.0%
!! TGTCTTATATTATTTATGTT+TGG + chr1_4:65920014-65920033 Msa0178570:intron 15.0%
!!! CAGAATAATAACATTTTTAT+AGG - chr1_4:65920557-65920576 None:intergenic 15.0%
!! AAAAATGTTATTATTCTGTT+AGG + chr1_4:65920559-65920578 Msa0178570:intron 15.0%
!!! TTAAATAAATTTGCTAATGA+TGG + chr1_4:65921302-65921321 Msa0178570:CDS 15.0%
!! ATATAATTGATTAAGTTCTT+TGG + chr1_4:65922555-65922574 Msa0178570:intron 15.0%
!! TAATTTAACCAATTTCAATA+AGG - chr1_4:65922638-65922657 None:intergenic 15.0%
!!! TAAGACATTTTTTGAAATTT+CGG - chr1_4:65922992-65923011 None:intergenic 15.0%
!! ATATATTATTATGAGAAATG+CGG + chr1_4:65923394-65923413 Msa0178570:intron 15.0%
!!! CAATCAAAATACTATTTCTT+AGG + chr1_4:65916758-65916777 Msa0178570:intron 20.0%
!! AATGAAGTGATAATACAATT+AGG - chr1_4:65916995-65917014 None:intergenic 20.0%
!!! ATCTGATTTTTTTCTTTCTT+TGG - chr1_4:65917266-65917285 None:intergenic 20.0%
!! AGCTTGATAAGATAAAAAAA+GGG + chr1_4:65917335-65917354 Msa0178570:CDS 20.0%
!!! ACTGTATTTAAGTTAGATTT+AGG + chr1_4:65918050-65918069 Msa0178570:intron 20.0%
!!! CTGTATTTAAGTTAGATTTA+GGG + chr1_4:65918051-65918070 Msa0178570:intron 20.0%
!!! AAGAAATTTTATCTTAGGAA+TGG - chr1_4:65918176-65918195 None:intergenic 20.0%
!!! AAAGGAAGAAATTTTATCTT+AGG - chr1_4:65918181-65918200 None:intergenic 20.0%
!!! AATTTTCCTTTAATATTGAG+TGG - chr1_4:65918358-65918377 None:intergenic 20.0%
!! TATTGGATTATTCTATCATA+TGG - chr1_4:65918649-65918668 None:intergenic 20.0%
!!! GTCTATTTGATAACAAAATA+AGG - chr1_4:65918780-65918799 None:intergenic 20.0%
!! AGAGAAACTTAATAAAATAG+TGG - chr1_4:65918910-65918929 None:intergenic 20.0%
!!! ATTTGACTATTTTTCAAATC+TGG + chr1_4:65919164-65919183 Msa0178570:intron 20.0%
!!! TATTTTTCAAATCTGGAATT+TGG + chr1_4:65919171-65919190 Msa0178570:intron 20.0%
!! AGTTTAACAGTGTTAAATTA+AGG + chr1_4:65919363-65919382 Msa0178570:intron 20.0%
!! GTTTAACAGTGTTAAATTAA+GGG + chr1_4:65919364-65919383 Msa0178570:intron 20.0%
!! TTTAACAGTGTTAAATTAAG+GGG + chr1_4:65919365-65919384 Msa0178570:intron 20.0%
!!! TGTTATTTAAGTAAAACTCA+AGG + chr1_4:65919424-65919443 Msa0178570:intron 20.0%
!! GTTATTTAAGTAAAACTCAA+GGG + chr1_4:65919425-65919444 Msa0178570:intron 20.0%
!! CTAAATCTCTCTTAATTATT+TGG - chr1_4:65919486-65919505 None:intergenic 20.0%
!!! GAGAGATTTAGATATAATTT+TGG + chr1_4:65919495-65919514 Msa0178570:intron 20.0%
!!! GTTCTTTTAACATGTTATAT+TGG - chr1_4:65920208-65920227 None:intergenic 20.0%
!!! TTCTTTTGACATGTTATATT+GGG - chr1_4:65920258-65920277 None:intergenic 20.0%
!! TAGAATGAAATAATATCAAC+AGG - chr1_4:65920734-65920753 None:intergenic 20.0%
!! ATTGAACGTTAATTAAAGAA+CGG - chr1_4:65920795-65920814 None:intergenic 20.0%
!! ATACATGAAACAAATATGTA+GGG - chr1_4:65921853-65921872 None:intergenic 20.0%
!! AATACATGAAACAAATATGT+AGG - chr1_4:65921854-65921873 None:intergenic 20.0%
!! CATATTTGTTTCATGTATTT+CGG + chr1_4:65921855-65921874 Msa0178570:intron 20.0%
!!! ATCTTTTTTTGGATATTCTT+GGG - chr1_4:65922277-65922296 None:intergenic 20.0%
!! AAAAAAAGATGAATGCAAAT+CGG + chr1_4:65922287-65922306 Msa0178570:CDS 20.0%
!! ACTTAATCAATTATATTGCA+GGG - chr1_4:65922551-65922570 None:intergenic 20.0%
!! AACTTAATCAATTATATTGC+AGG - chr1_4:65922552-65922571 None:intergenic 20.0%
!! ATTTGATACCTTATTGAAAT+TGG + chr1_4:65922627-65922646 Msa0178570:intron 20.0%
!! TTGAAATTGGTTAAATTACA+TGG + chr1_4:65922640-65922659 Msa0178570:intron 20.0%
!! AGTAACCTTAAGATATATAA+TGG + chr1_4:65922803-65922822 Msa0178570:intron 20.0%
!! ATTCACCATTATATATCTTA+AGG - chr1_4:65922811-65922830 None:intergenic 20.0%
!!! ATGGTGAATTAAATTTTAAG+TGG + chr1_4:65922822-65922841 Msa0178570:intron 20.0%
!! TATATTATTATGAGAAATGC+GGG + chr1_4:65923395-65923414 Msa0178570:intron 20.0%
!!! ACACTATAATTACTAACTTT+TGG + chr1_4:65923552-65923571 Msa0178570:intron 20.0%
!!! CACTATAATTACTAACTTTT+GGG + chr1_4:65923553-65923572 Msa0178570:intron 20.0%
!!! ACTATAATTACTAACTTTTG+GGG + chr1_4:65923554-65923573 Msa0178570:intron 20.0%
!!! TAAATGCTTGATAATTTACA+TGG - chr1_4:65923707-65923726 None:intergenic 20.0%
!!! TGTATGGTTAAAACTTTTTA+AGG - chr1_4:65923926-65923945 None:intergenic 20.0%
!!! ACATCTAGTTTTTTTTTTTG+GGG - chr1_4:65924111-65924130 None:intergenic 20.0%
!!! GACATCTAGTTTTTTTTTTT+GGG - chr1_4:65924112-65924131 None:intergenic 20.0%
!!! TGACATCTAGTTTTTTTTTT+TGG - chr1_4:65924113-65924132 None:intergenic 20.0%
!! AAAAACTAGATGTCAAATAA+AGG + chr1_4:65924118-65924137 Msa0178570:intron 20.0%
!!! TTTCATCTTATTTTGTTTTG+CGG + chr1_4:65924357-65924376 Msa0178570:intron 20.0%
!! TTGAAACACAATTGAAATAA+TGG - chr1_4:65924623-65924642 None:intergenic 20.0%
!! GATTGAAGCAAATTTAAAAA+CGG - chr1_4:65924662-65924681 None:intergenic 20.0%
!! TTATATTGTTACATTACATG+TGG - chr1_4:65925132-65925151 None:intergenic 20.0%
!!! ATTTATTCGTGTTTTTTTGC+AGG + chr1_4:65917039-65917058 Msa0178570:intron 25.0%
! TAAATCTAGAAAATGCTTTC+TGG + chr1_4:65917077-65917096 Msa0178570:exon 25.0%
! AAATCTAGAAAATGCTTTCT+GGG + chr1_4:65917078-65917097 Msa0178570:exon 25.0%
! GAAAAAAATCAGATATTAGG+AGG + chr1_4:65917272-65917291 Msa0178570:CDS 25.0%
! CAGCTTGATAAGATAAAAAA+AGG + chr1_4:65917334-65917353 Msa0178570:CDS 25.0%
! TAAAAAGGAATATACATCTG+AGG + chr1_4:65917489-65917508 Msa0178570:CDS 25.0%
! AAAAGTCATGTTCAAAAGAT+GGG + chr1_4:65917569-65917588 Msa0178570:CDS 25.0%
!! CATTTCTTTTCTTGCAATAT+CGG - chr1_4:65917626-65917645 None:intergenic 25.0%
! GATATTGCAAGAAAAGAAAT+GGG + chr1_4:65917625-65917644 Msa0178570:CDS 25.0%
!!! AAATTCTAAGATTAATGCCA+TGG - chr1_4:65918029-65918048 None:intergenic 25.0%
!!! TCCTTTTTTTATTCCACAAA+GGG - chr1_4:65918092-65918111 None:intergenic 25.0%
!!! TTCCTTTTTTTATTCCACAA+AGG - chr1_4:65918093-65918112 None:intergenic 25.0%
! ATGTATCCCTATAACTTAAA+GGG - chr1_4:65918244-65918263 None:intergenic 25.0%
! CAAAACAACTGTAAGATAAA+AGG + chr1_4:65918268-65918287 Msa0178570:intron 25.0%
! TAAAAGGAGATATAAACCAT+AGG + chr1_4:65918284-65918303 Msa0178570:intron 25.0%
! AAGTATAGTTACTCATTTGT+AGG - chr1_4:65918478-65918497 None:intergenic 25.0%
! ATACTTATACAAGACAATGT+AGG + chr1_4:65918492-65918511 Msa0178570:intron 25.0%
!! TGTTATTTAAGACAACCTTA+GGG - chr1_4:65918719-65918738 None:intergenic 25.0%
!! TGTTTGATTTAAAACTAGAG+GGG - chr1_4:65918749-65918768 None:intergenic 25.0%
!! GTGTTTGATTTAAAACTAGA+GGG - chr1_4:65918750-65918769 None:intergenic 25.0%
!! AGTGTTTGATTTAAAACTAG+AGG - chr1_4:65918751-65918770 None:intergenic 25.0%
!! ATTTGATAACAAAATAAGGG+AGG - chr1_4:65918776-65918795 None:intergenic 25.0%
!!! AGTTTCTCTTCTATTTTTTG+TGG + chr1_4:65918921-65918940 Msa0178570:intron 25.0%
! GTTAGATAAAGAAACAACAA+AGG - chr1_4:65919340-65919359 None:intergenic 25.0%
!!! TTGTGTTTTTTGAAAACTAG+AGG + chr1_4:65919392-65919411 Msa0178570:intron 25.0%
!!! TGTGTTTTTTGAAAACTAGA+GGG + chr1_4:65919393-65919412 Msa0178570:intron 25.0%
!! TTGGTAAATAGTTTTCCAAA+GGG - chr1_4:65919467-65919486 None:intergenic 25.0%
!! TTTGGTAAATAGTTTTCCAA+AGG - chr1_4:65919468-65919487 None:intergenic 25.0%
!! TTTTGGATTTGATTCAAGAT+CGG + chr1_4:65919512-65919531 Msa0178570:intron 25.0%
! AGCAATAACTAATGAGTAAA+TGG + chr1_4:65919853-65919872 Msa0178570:intron 25.0%
! TGTTATCCAAAAACTGAAAA+AGG + chr1_4:65919893-65919912 Msa0178570:intron 25.0%
!! GTTCTTTTGACATGTTATAT+TGG - chr1_4:65920259-65920278 None:intergenic 25.0%
!! TTCTTTCTTTTAGTCAAAGA+AGG + chr1_4:65920291-65920310 Msa0178570:intron 25.0%
! AATGAAATAATATCAACAGG+AGG - chr1_4:65920731-65920750 None:intergenic 25.0%
! GTTCTTTAATTAACGTTCAA+TGG + chr1_4:65920794-65920813 Msa0178570:intron 25.0%
! TTCTTAACGTATTCACTATA+TGG + chr1_4:65920817-65920836 Msa0178570:intron 25.0%
! TGAACAAAAAAATAATCACG+AGG - chr1_4:65921626-65921645 None:intergenic 25.0%
! ACTTAATAAAAATAACCACG+AGG - chr1_4:65921659-65921678 None:intergenic 25.0%
!!! TTTTCCATTATTGTTTTGGT+GGG + chr1_4:65921686-65921705 Msa0178570:intron 25.0%
! TACATGAAACAAATATGTAG+GGG - chr1_4:65921852-65921871 None:intergenic 25.0%
! ATGCATAAATTTGTAGAAAC+CGG - chr1_4:65922025-65922044 None:intergenic 25.0%
! TACCTTTCTTATGATTTCAA+TGG + chr1_4:65922052-65922071 Msa0178570:intron 25.0%
!! GTGACATTTTACTTTATTCA+AGG + chr1_4:65922074-65922093 Msa0178570:intron 25.0%
!!! TCTTTTTTTGGATATTCTTG+GGG - chr1_4:65922276-65922295 None:intergenic 25.0%
!!! CATCTTTTTTTGGATATTCT+TGG - chr1_4:65922278-65922297 None:intergenic 25.0%
!!! GATTTGCATTCATCTTTTTT+TGG - chr1_4:65922288-65922307 None:intergenic 25.0%
! TTTGTCTAGAAAATCCAAAT+CGG + chr1_4:65922338-65922357 Msa0178570:CDS 25.0%
! AAGATATGTGAAATTTGCAA+TGG - chr1_4:65922383-65922402 None:intergenic 25.0%
! AATTGATTAAGTTCTTTGGT+CGG + chr1_4:65922559-65922578 Msa0178570:intron 25.0%
! TTGTAATATTATTGCGTGTT+CGG + chr1_4:65922667-65922686 Msa0178570:intron 25.0%
!!! TCAGTTGATTTGTATCATAA+CGG + chr1_4:65922861-65922880 Msa0178570:intron 25.0%
! TAGATGAATAGTTCATTTCA+AGG - chr1_4:65923240-65923259 None:intergenic 25.0%
! AATTATCTACAGAGTTTCTT+TGG + chr1_4:65923609-65923628 Msa0178570:intron 25.0%
! TTTGACATTTCATCAAAGAA+GGG - chr1_4:65923638-65923657 None:intergenic 25.0%
! ATTTGACATTTCATCAAAGA+AGG - chr1_4:65923639-65923658 None:intergenic 25.0%
! ACTTAGAGAAAAATGACATT+AGG + chr1_4:65923798-65923817 Msa0178570:intron 25.0%
!!! ATCTAGTTTTTTTTTTTGGG+GGG - chr1_4:65924109-65924128 None:intergenic 25.0%
!!! CATCTAGTTTTTTTTTTTGG+GGG - chr1_4:65924110-65924129 None:intergenic 25.0%
! ATTTAAATCAAACTCAACGT+GGG - chr1_4:65924223-65924242 None:intergenic 25.0%
! AATTTAAATCAAACTCAACG+TGG - chr1_4:65924224-65924243 None:intergenic 25.0%
!! AAATTCACAAGCTTTTAAAC+TGG + chr1_4:65924239-65924258 Msa0178570:intron 25.0%
! TAAGATGAAACCATTTAAAC+TGG - chr1_4:65924347-65924366 None:intergenic 25.0%
! ATCATATAATGACATAGTTC+AGG - chr1_4:65924404-65924423 None:intergenic 25.0%
!! TTTAAATTTGCTTCAATCAC+AGG + chr1_4:65924664-65924683 Msa0178570:intron 25.0%
! CCAAATTCTACATGAAAATA+AGG - chr1_4:65924788-65924807 None:intergenic 25.0%
!!! CCTTATTTTCATGTAGAATT+TGG + chr1_4:65924785-65924804 Msa0178570:CDS 25.0%
! TTACATAGCAACTATTTCAT+TGG - chr1_4:65925211-65925230 None:intergenic 25.0%
! TGAAATAGTTGCTATGTAAT+AGG + chr1_4:65925212-65925231 Msa0178570:three_prime_UTR 25.0%
TAGTGGTAGTTTCAATTTGT+TGG - chr1_4:65916723-65916742 None:intergenic 30.0%
ACAAATTGAAACTACCACTA+AGG + chr1_4:65916723-65916742 Msa0178570:five_prime_UTR 30.0%
TGATTGATTGATTACCTTAG+TGG - chr1_4:65916740-65916759 None:intergenic 30.0%
! TTTCTTAGGGCGTTAAAATT+TGG + chr1_4:65916772-65916791 Msa0178570:intron 30.0%
! TTCTTAGGGCGTTAAAATTT+GGG + chr1_4:65916773-65916792 Msa0178570:intron 30.0%
CATAAACCTAATATAGAGAG+AGG - chr1_4:65916901-65916920 None:intergenic 30.0%
!!! TTTTTTTGCAGGCATTAGTA+AGG + chr1_4:65917050-65917069 Msa0178570:intron 30.0%
AATCTAGAAAATGCTTTCTG+GGG + chr1_4:65917079-65917098 Msa0178570:exon 30.0%
GCAAAATCAGACTGAAAAAT+AGG - chr1_4:65917176-65917195 None:intergenic 30.0%
TGTATATACTAGGTACAAGA+TGG + chr1_4:65917217-65917236 Msa0178570:intron 30.0%
GTATATACTAGGTACAAGAT+GGG + chr1_4:65917218-65917237 Msa0178570:intron 30.0%
ATCAGATATTAGGAGGAAAA+AGG + chr1_4:65917279-65917298 Msa0178570:CDS 30.0%
AAGGGAAAAAAGAAAAGAGA+TGG + chr1_4:65917451-65917470 Msa0178570:CDS 30.0%
GAAAAAAGAAAAGAGATGGA+CGG + chr1_4:65917455-65917474 Msa0178570:CDS 30.0%
! CATCTTTTGAACATGACTTT+TGG - chr1_4:65917570-65917589 None:intergenic 30.0%
CAAAAGTCATGTTCAAAAGA+TGG + chr1_4:65917568-65917587 Msa0178570:CDS 30.0%
CGATATTGCAAGAAAAGAAA+TGG + chr1_4:65917624-65917643 Msa0178570:CDS 30.0%
! GAGAAACTTTTGTGTCTATA+TGG + chr1_4:65917930-65917949 Msa0178570:intron 30.0%
TACTATCTTTCATTGATGAG+TGG - chr1_4:65917963-65917982 None:intergenic 30.0%
CTCATCAATGAAAGATAGTA+TGG + chr1_4:65917963-65917982 Msa0178570:intron 30.0%
TTGAATTGTCCAATATACCA+TGG + chr1_4:65918009-65918028 Msa0178570:intron 30.0%
AGATTAATGCCATGGTATAT+TGG - chr1_4:65918021-65918040 None:intergenic 30.0%
GAATGGTGTATTCAAAACAT+TGG - chr1_4:65918159-65918178 None:intergenic 30.0%
! AGCATTTCCCTTTAAGTTAT+AGG + chr1_4:65918234-65918253 Msa0178570:intron 30.0%
! GCATTTCCCTTTAAGTTATA+GGG + chr1_4:65918235-65918254 Msa0178570:intron 30.0%
GATGTATCCCTATAACTTAA+AGG - chr1_4:65918245-65918264 None:intergenic 30.0%
GGAAAATTGTATCACAGTTT+AGG + chr1_4:65918370-65918389 Msa0178570:intron 30.0%
CTATAGAGTTTAATGTCACA+CGG + chr1_4:65918403-65918422 Msa0178570:intron 30.0%
ATACAAGACAATGTAGGATT+TGG + chr1_4:65918498-65918517 Msa0178570:intron 30.0%
! TGGTAATGTTCTGTCTTAAA+TGG + chr1_4:65918570-65918589 Msa0178570:intron 30.0%
TAGAATAATCCAATAGTCAG+TGG + chr1_4:65918654-65918673 Msa0178570:intron 30.0%
! GTTATTTAAGACAACCTTAG+GGG - chr1_4:65918718-65918737 None:intergenic 30.0%
!! GTGTTATTTAAGACAACCTT+AGG - chr1_4:65918720-65918739 None:intergenic 30.0%
! TTAATGGTGTTAAGATGGAA+GGG - chr1_4:65918811-65918830 None:intergenic 30.0%
! TTTAATGGTGTTAAGATGGA+AGG - chr1_4:65918812-65918831 None:intergenic 30.0%
! GAGATTTAATGGTGTTAAGA+TGG - chr1_4:65918816-65918835 None:intergenic 30.0%
GAGTTAACAGAGAGATTTAA+TGG - chr1_4:65918827-65918846 None:intergenic 30.0%
AATGCAATTTCACCAAACAA+AGG + chr1_4:65919013-65919032 Msa0178570:intron 30.0%
ACAAAAAACCAAAGAACAGA+AGG + chr1_4:65919117-65919136 Msa0178570:intron 30.0%
CAAAAAACCAAAGAACAGAA+GGG + chr1_4:65919118-65919137 Msa0178570:intron 30.0%
AAAAAACCAAAGAACAGAAG+GGG + chr1_4:65919119-65919138 Msa0178570:intron 30.0%
! ATTCAAAAGGCATGAAACAA+TGG - chr1_4:65919215-65919234 None:intergenic 30.0%
CCTGTAAAACTTGAATTTCA+TGG - chr1_4:65919246-65919265 None:intergenic 30.0%
!! CCATGAAATTCAAGTTTTAC+AGG + chr1_4:65919243-65919262 Msa0178570:intron 30.0%
!!! GTGTTTTTTGAAAACTAGAG+GGG + chr1_4:65919394-65919413 Msa0178570:intron 30.0%
!!! TGTTTTTTGAAAACTAGAGG+GGG + chr1_4:65919395-65919414 Msa0178570:intron 30.0%
ATTTAAGTAAAACTCAAGGG+AGG + chr1_4:65919428-65919447 Msa0178570:intron 30.0%
ATCTACAATACATCTGCATT+GGG - chr1_4:65919663-65919682 None:intergenic 30.0%
TATCTACAATACATCTGCAT+TGG - chr1_4:65919664-65919683 None:intergenic 30.0%
CAACTTCAAATATTATGCCA+AGG + chr1_4:65919752-65919771 Msa0178570:intron 30.0%
AATGACAATACAACAACAGA+AGG - chr1_4:65919782-65919801 None:intergenic 30.0%
! CCAAAAACTGAAAAAGGTAT+CGG + chr1_4:65919899-65919918 Msa0178570:intron 30.0%
TGAAGTATGATTTAAGCCTT+TGG + chr1_4:65919957-65919976 Msa0178570:intron 30.0%
TAAGCTGCAAACAAAATGAA+GGG - chr1_4:65920163-65920182 None:intergenic 30.0%
ATAAGCTGCAAACAAAATGA+AGG - chr1_4:65920164-65920183 None:intergenic 30.0%
AGATAAGGATTCAATTCCTT+AGG - chr1_4:65920322-65920341 None:intergenic 30.0%
GGAATTGAATCCTTATCTAA+AGG + chr1_4:65920324-65920343 Msa0178570:CDS 30.0%
AATCCTTATCTAAAGGATGA+TGG + chr1_4:65920331-65920350 Msa0178570:CDS 30.0%
AAAGAATGTGTGAAAAGCAA+GGG - chr1_4:65920519-65920538 None:intergenic 30.0%
TAAAGAATGTGTGAAAAGCA+AGG - chr1_4:65920520-65920539 None:intergenic 30.0%
! CATTTTTATAGGATAGACAG+AGG - chr1_4:65920546-65920565 None:intergenic 30.0%
TATTATTCTGTTAGGACAGA+AGG + chr1_4:65920567-65920586 Msa0178570:intron 30.0%
TAGAGGGAAGATAATTAGTT+TGG + chr1_4:65920607-65920626 Msa0178570:intron 30.0%
! AGAGGGAAGATAATTAGTTT+GGG + chr1_4:65920608-65920627 Msa0178570:intron 30.0%
ACGTTAATTAAAGAACGGAA+TGG - chr1_4:65920790-65920809 None:intergenic 30.0%
GAATTTCGCTTATGAAATAC+TGG + chr1_4:65921138-65921157 Msa0178570:intron 30.0%
ACATAAAAAATACTCCTCCT+CGG + chr1_4:65921168-65921187 Msa0178570:CDS 30.0%
GATAATGAATCTTGCACTTT+AGG - chr1_4:65921212-65921231 None:intergenic 30.0%
AAGTGCAAGATTCATTATCT+TGG + chr1_4:65921213-65921232 Msa0178570:CDS 30.0%
!!! TGTTTTGGAAAGTTTTGAAG+CGG + chr1_4:65921376-65921395 Msa0178570:CDS 30.0%
! GTGCTTTTCCATTATTGTTT+TGG + chr1_4:65921682-65921701 Msa0178570:intron 30.0%
!!! CTTTTCCATTATTGTTTTGG+TGG + chr1_4:65921685-65921704 Msa0178570:intron 30.0%
TGAAATTAGATCAAGAACTG+AGG + chr1_4:65921756-65921775 Msa0178570:CDS 30.0%
GAAATTAGATCAAGAACTGA+GGG + chr1_4:65921757-65921776 Msa0178570:CDS 30.0%
CACCATTGAAATCATAAGAA+AGG - chr1_4:65922057-65922076 None:intergenic 30.0%
! TTCTTTCTACTCTTTTTGCT+TGG - chr1_4:65922238-65922257 None:intergenic 30.0%
AAAAAGAGTAGAAAGAAGCA+AGG + chr1_4:65922241-65922260 Msa0178570:CDS 30.0%
! TTGGATTTTCTAGACAAAAG+AGG - chr1_4:65922336-65922355 None:intergenic 30.0%
GAAATTAAACTCACGTGAAT+GGG - chr1_4:65922454-65922473 None:intergenic 30.0%
AGAAATTAAACTCACGTGAA+TGG - chr1_4:65922455-65922474 None:intergenic 30.0%
!!! AAGCTTATGGTTTTTTCAAC+TGG - chr1_4:65922509-65922528 None:intergenic 30.0%
ATAAACCATATTTGGATCCA+AGG - chr1_4:65922699-65922718 None:intergenic 30.0%
GCTCTATCATAAACCATATT+TGG - chr1_4:65922707-65922726 None:intergenic 30.0%
! TGGTTTATGATAGAGCATTA+TGG + chr1_4:65922711-65922730 Msa0178570:intron 30.0%
TGATTCATGCTGTCATATTA+AGG - chr1_4:65922931-65922950 None:intergenic 30.0%
CTGACCTTCTTAAAGTATAA+AGG - chr1_4:65923140-65923159 None:intergenic 30.0%
!! TATAAGAAAAGCACTGATTC+TGG - chr1_4:65923212-65923231 None:intergenic 30.0%
! GAATGTATTCAGAGCATTTA+AGG + chr1_4:65923417-65923436 Msa0178570:intron 30.0%
CCTTATTATAGAAACGCTAT+GGG - chr1_4:65923478-65923497 None:intergenic 30.0%
ACCTTATTATAGAAACGCTA+TGG - chr1_4:65923479-65923498 None:intergenic 30.0%
AGATAGTTCAAACTGCAAAT+TGG + chr1_4:65923659-65923678 Msa0178570:intron 30.0%
AAAAAGTTGACAAACACACA+AGG - chr1_4:65923739-65923758 None:intergenic 30.0%
! TTGTGTGTTTGTCAACTTTT+TGG + chr1_4:65923738-65923757 Msa0178570:intron 30.0%
! TGTGTGTTTGTCAACTTTTT+GGG + chr1_4:65923739-65923758 Msa0178570:intron 30.0%
! ACCTTTTGGTATCAAATTTG+TGG - chr1_4:65923871-65923890 None:intergenic 30.0%
TCAATATAGAGTAATGAAGC+AGG - chr1_4:65923902-65923921 None:intergenic 30.0%
TAGATGTCAAATAAAGGACA+GGG + chr1_4:65924124-65924143 Msa0178570:intron 30.0%
AACCACATCATGTATAAAAC+TGG + chr1_4:65924310-65924329 Msa0178570:intron 30.0%
!! ATCCAGTTTTATACATGATG+TGG - chr1_4:65924315-65924334 None:intergenic 30.0%
TCAGTTTCTACCAGTTTAAA+TGG + chr1_4:65924334-65924353 Msa0178570:intron 30.0%
!! TAAGTTTTAATGACCACATG+TGG - chr1_4:65924445-65924464 None:intergenic 30.0%
TGATATTCCAGTATAGCATT+TGG + chr1_4:65924552-65924571 Msa0178570:intron 30.0%
! TTTTTCACCAAATGCTATAC+TGG - chr1_4:65924562-65924581 None:intergenic 30.0%
GAAGCAAATTTAAAAACGGA+CGG - chr1_4:65924658-65924677 None:intergenic 30.0%
TGAAAATAAGGAAAGTCCTT+GGG - chr1_4:65924776-65924795 None:intergenic 30.0%
ATGAAAATAAGGAAAGTCCT+TGG - chr1_4:65924777-65924796 None:intergenic 30.0%
GTAGAATTTGGTCTAAACAA+AGG + chr1_4:65924797-65924816 Msa0178570:CDS 30.0%
! CCTTTTCATCATCAATAACA+TGG - chr1_4:65924829-65924848 None:intergenic 30.0%
!! CCATGTTATTGATGATGAAA+AGG + chr1_4:65924826-65924845 Msa0178570:CDS 30.0%
!!! CATTGGTAATATGCTGATTT+TGG - chr1_4:65925194-65925213 None:intergenic 30.0%
! TTTTGTAGTTCACTATTCCC+CGG + chr1_4:65916454-65916473 Msa0178570:five_prime_UTR 35.0%
! ACTAATAGAAGGGTGTAGAA+TGG - chr1_4:65916599-65916618 None:intergenic 35.0%
CGGAGAGAAAACTAATAGAA+GGG - chr1_4:65916609-65916628 None:intergenic 35.0%
ACGGAGAGAAAACTAATAGA+AGG - chr1_4:65916610-65916629 None:intergenic 35.0%
!! TGGTAGTTTCAATTTGTTGG+AGG - chr1_4:65916720-65916739 None:intergenic 35.0%
TGATTGATTGATCCTGCAAT+TGG + chr1_4:65916822-65916841 Msa0178570:intron 35.0%
GATTGATTGATCCTGCAATT+GGG + chr1_4:65916823-65916842 Msa0178570:intron 35.0%
ATTGATTGATCCTGCAATTG+GGG + chr1_4:65916824-65916843 Msa0178570:intron 35.0%
AATCGACCTCTCTCTATATT+AGG + chr1_4:65916892-65916911 Msa0178570:intron 35.0%
GTTACTGCGTTGTATATACT+AGG + chr1_4:65917207-65917226 Msa0178570:intron 35.0%
TTAGGAGGAAAAAGGATAAG+AGG + chr1_4:65917287-65917306 Msa0178570:CDS 35.0%
TGAATACCACTTCTTCTTTC+TGG - chr1_4:65917362-65917381 None:intergenic 35.0%
TGCAAGAAAAGAAATGGGAT+TGG + chr1_4:65917630-65917649 Msa0178570:CDS 35.0%
GAAAAGAAATGGGATTGGAT+TGG + chr1_4:65917635-65917654 Msa0178570:CDS 35.0%
GCCCTTTGTGGAATAAAAAA+AGG + chr1_4:65918088-65918107 Msa0178570:intron 35.0%
ACTTAAAGGGAAATGCTAAC+AGG - chr1_4:65918231-65918250 None:intergenic 35.0%
! TGTTTGGATTTTGGATCCTA+TGG - chr1_4:65918303-65918322 None:intergenic 35.0%
AAAATCCAAACAGTGTGGAT+GGG + chr1_4:65918311-65918330 Msa0178570:intron 35.0%
!! AAGGTGCCACTCAATATTAA+AGG + chr1_4:65918349-65918368 Msa0178570:intron 35.0%
ATTAAACTCTATAGTGCTGC+AGG - chr1_4:65918397-65918416 None:intergenic 35.0%
AAAGAGACGACAAGAAAGTA+AGG + chr1_4:65918427-65918446 Msa0178570:intron 35.0%
AATCATCGCAGATGAAGTTT+GGG + chr1_4:65918526-65918545 Msa0178570:intron 35.0%
TACCATCTTTGCTACGATAA+GGG - chr1_4:65918555-65918574 None:intergenic 35.0%
TTACCATCTTTGCTACGATA+AGG - chr1_4:65918556-65918575 None:intergenic 35.0%
ATAATCCAATAGTCAGTGGA+AGG + chr1_4:65918658-65918677 Msa0178570:intron 35.0%
!! GGGCTATTTTATCCTTTGTT+TGG - chr1_4:65919028-65919047 None:intergenic 35.0%
ACACAGAAAAGAAACACTTC+AGG + chr1_4:65919091-65919110 Msa0178570:intron 35.0%
!!! TTTTTTCCCCTTCTGTTCTT+TGG - chr1_4:65919128-65919147 None:intergenic 35.0%
AAAGAACAGAAGGGGAAAAA+AGG + chr1_4:65919127-65919146 Msa0178570:intron 35.0%
AACAGTGTTAAATTAAGGGG+AGG + chr1_4:65919368-65919387 Msa0178570:intron 35.0%
! CTTTTGTCATGTTATAGTGC+AGG + chr1_4:65919626-65919645 Msa0178570:intron 35.0%
TCTTACGTTCTATCTTCTAG+AGG + chr1_4:65919685-65919704 Msa0178570:intron 35.0%
GAAATTACAAGTTTGAGCTG+TGG - chr1_4:65919717-65919736 None:intergenic 35.0%
!!! CCGATACCTTTTTCAGTTTT+TGG - chr1_4:65919902-65919921 None:intergenic 35.0%
TTCCATATTGATGTTCCAAC+AGG + chr1_4:65920102-65920121 Msa0178570:intron 35.0%
GTGAAGTGTATGTTCAGTTA+TGG + chr1_4:65920124-65920143 Msa0178570:intron 35.0%
AAGCTGCAAACAAAATGAAG+GGG - chr1_4:65920162-65920181 None:intergenic 35.0%
CTTCCATCATCCTTTAGATA+AGG - chr1_4:65920337-65920356 None:intergenic 35.0%
!! TATCTAAAGGATGATGGAAG+TGG + chr1_4:65920337-65920356 Msa0178570:CDS 35.0%
ATCTTTGCTTGGAAGAATAG+AGG + chr1_4:65920590-65920609 Msa0178570:intron 35.0%
TCTTTGCTTGGAAGAATAGA+GGG + chr1_4:65920591-65920610 Msa0178570:intron 35.0%
AAATGTGTAAGTGTAGTGAG+AGG + chr1_4:65920631-65920650 Msa0178570:intron 35.0%
AGAATGATGAAACCCTTGTA+AGG + chr1_4:65920695-65920714 Msa0178570:intron 35.0%
TTCACTATATGGATACGTAC+AGG + chr1_4:65920828-65920847 Msa0178570:intron 35.0%
CTATAAGAAGCAGACAAAGA+GGG + chr1_4:65920938-65920957 Msa0178570:CDS 35.0%
TATAAGAAGCAGACAAAGAG+GGG + chr1_4:65920939-65920958 Msa0178570:CDS 35.0%
ATTCTGATAAGCCTATCCAA+CGG + chr1_4:65920983-65921002 Msa0178570:CDS 35.0%
! TATCCAACGGGATTCTAAAA+GGG + chr1_4:65920996-65921015 Msa0178570:CDS 35.0%
CTTTAGGTGCTTTCATTTCA+TGG - chr1_4:65921196-65921215 None:intergenic 35.0%
TGAAGAAGCTGATAGACTAA+TGG + chr1_4:65921514-65921533 Msa0178570:CDS 35.0%
AAAATAATCACGAGGCTAGA+AGG - chr1_4:65921618-65921637 None:intergenic 35.0%
GTTCAAAAAAAAAAGCCTCG+TGG + chr1_4:65921641-65921660 Msa0178570:intron 35.0%
TTTCGGATGTGAAAACATTG+TGG + chr1_4:65921872-65921891 Msa0178570:intron 35.0%
TGAAAACATTGTGGCTAAGA+TGG + chr1_4:65921881-65921900 Msa0178570:intron 35.0%
! ACGTTTTGCATCAATAGTAC+CGG + chr1_4:65922003-65922022 Msa0178570:intron 35.0%
ATATCTTCTGAGCAGAAGAA+AGG + chr1_4:65922112-65922131 Msa0178570:CDS 35.0%
AATGCAGAACAAGCAGTTTA+AGG + chr1_4:65922171-65922190 Msa0178570:CDS 35.0%
! GCAGTTTAAGGTTTATACTC+AGG + chr1_4:65922183-65922202 Msa0178570:CDS 35.0%
! GTTTAAGGTTTATACTCAGG+CGG + chr1_4:65922186-65922205 Msa0178570:CDS 35.0%
!! GATGAATATGACTTTGAGAC+TGG + chr1_4:65922211-65922230 Msa0178570:CDS 35.0%
TTCAACGAACAACAAGCTTA+TGG - chr1_4:65922522-65922541 None:intergenic 35.0%
AGTAACCTTGGATCCAAATA+TGG + chr1_4:65922691-65922710 Msa0178570:intron 35.0%
AGTGTTTCTTGAAACTGTGA+TGG + chr1_4:65923043-65923062 Msa0178570:CDS 35.0%
GTGTTTCTTGAAACTGTGAT+GGG + chr1_4:65923044-65923063 Msa0178570:CDS 35.0%
! GGCTCCTTTATACTTTAAGA+AGG + chr1_4:65923133-65923152 Msa0178570:CDS 35.0%
AAAACATCATCAGTGTTCCA+TGG + chr1_4:65923304-65923323 Msa0178570:intron 35.0%
AAACATCATCAGTGTTCCAT+GGG + chr1_4:65923305-65923324 Msa0178570:intron 35.0%
CCCATAGCGTTTCTATAATA+AGG + chr1_4:65923475-65923494 Msa0178570:intron 35.0%
!! TTGGGGAGTAACTTGTTAAA+TGG + chr1_4:65923571-65923590 Msa0178570:intron 35.0%
!! CTTGTTAAATGGTTCTAGCA+TGG + chr1_4:65923582-65923601 Msa0178570:intron 35.0%
! GGTTTTCTCATTCAACTTCA+TGG - chr1_4:65923686-65923705 None:intergenic 35.0%
! GTGTGTTTGTCAACTTTTTG+GGG + chr1_4:65923740-65923759 Msa0178570:intron 35.0%
TCTAAGTACGATACATGACT+AGG - chr1_4:65923785-65923804 None:intergenic 35.0%
ATCCAAATGTCCTCGTATAA+GGG - chr1_4:65923826-65923845 None:intergenic 35.0%
GCCACAAATTTGATACCAAA+AGG + chr1_4:65923867-65923886 Msa0178570:intron 35.0%
!! CTGCTTCATTTTTGTTTCCA+TGG + chr1_4:65923960-65923979 Msa0178570:intron 35.0%
!! TTTTGTTTCCATGGAGTACT+CGG + chr1_4:65923969-65923988 Msa0178570:intron 35.0%
CATGTTTAGATATGGTCATG+TGG + chr1_4:65924049-65924068 Msa0178570:intron 35.0%
!!! AGTTTTTTTTTTTGGGGGGT+GGG - chr1_4:65924105-65924124 None:intergenic 35.0%
!!! TAGTTTTTTTTTTTGGGGGG+TGG - chr1_4:65924106-65924125 None:intergenic 35.0%
CTAGATGTCAAATAAAGGAC+AGG + chr1_4:65924123-65924142 Msa0178570:intron 35.0%
TCATGATTCATGATTTCACG+TGG + chr1_4:65924174-65924193 Msa0178570:intron 35.0%
! CACAAGCTTTTAAACTGGTT+CGG + chr1_4:65924244-65924263 Msa0178570:intron 35.0%
AATGATCCCAAAGGAAAACA+AGG - chr1_4:65924533-65924552 None:intergenic 35.0%
TGGAATATCAATGATCCCAA+AGG - chr1_4:65924542-65924561 None:intergenic 35.0%
! ACTCGTATCAATGAGTCTTT+TGG - chr1_4:65924729-65924748 None:intergenic 35.0%
AAGGAGTTTAAGAGTAGTCT+TGG + chr1_4:65924845-65924864 Msa0178570:CDS 35.0%
AGGAGTTTAAGAGTAGTCTT+GGG + chr1_4:65924846-65924865 Msa0178570:CDS 35.0%
AAGACATGTATAGACGTCAA+AGG + chr1_4:65924906-65924925 Msa0178570:CDS 35.0%
CAATATAACTCGTTTATGCC+CGG + chr1_4:65925144-65925163 Msa0178570:three_prime_UTR 35.0%
AATATAACTCGTTTATGCCC+GGG + chr1_4:65925145-65925164 Msa0178570:three_prime_UTR 35.0%
! ATTTGTTGGAGGCTGCAAAT+TGG - chr1_4:65916709-65916728 None:intergenic 40.0%
TCCCTGCTGTGAAATTGATT+AGG + chr1_4:65916860-65916879 Msa0178570:intron 40.0%
CCCTAATCAATTTCACAGCA+GGG - chr1_4:65916864-65916883 None:intergenic 40.0%
CCCTGCTGTGAAATTGATTA+GGG + chr1_4:65916861-65916880 Msa0178570:intron 40.0%
ACCCTAATCAATTTCACAGC+AGG - chr1_4:65916865-65916884 None:intergenic 40.0%
GCATAAACCTCAATCAGCAA+GGG - chr1_4:65916939-65916958 None:intergenic 40.0%
TGCATAAACCTCAATCAGCA+AGG - chr1_4:65916940-65916959 None:intergenic 40.0%
TAACTCTACAAACCTGGTCA+CGG - chr1_4:65917118-65917137 None:intergenic 40.0%
GTATGGTAACTCTACAAACC+TGG - chr1_4:65917124-65917143 None:intergenic 40.0%
CAGTGAGACTGATAGAAGTA+TGG - chr1_4:65917141-65917160 None:intergenic 40.0%
TACAAGATGGGAACTTGGAT+AGG + chr1_4:65917230-65917249 Msa0178570:CDS 40.0%
ACAAGATGGGAACTTGGATA+GGG + chr1_4:65917231-65917250 Msa0178570:CDS 40.0%
GAAGACTCTTCTTCTTCAGA+TGG + chr1_4:65917511-65917530 Msa0178570:CDS 40.0%
!!! ATGACTTTTGGTGTTTCCGT+TGG - chr1_4:65917558-65917577 None:intergenic 40.0%
TCATGTTCAAAAGATGGGAG+CGG + chr1_4:65917574-65917593 Msa0178570:CDS 40.0%
TGCGTAAGTCTGAAAGTAAG+AGG + chr1_4:65917659-65917678 Msa0178570:CDS 40.0%
!! TCCTTTGTTTCTGAAACAGC+TGG - chr1_4:65917685-65917704 None:intergenic 40.0%
AACAAAGGAGATATTGCCAG+AGG + chr1_4:65917696-65917715 Msa0178570:CDS 40.0%
TAGACATTTGAACAGCTGAG+GGG - chr1_4:65917765-65917784 None:intergenic 40.0%
CTAGACATTTGAACAGCTGA+GGG - chr1_4:65917766-65917785 None:intergenic 40.0%
TTATGCCCGTCATAATCTGT+TGG + chr1_4:65917843-65917862 Msa0178570:intron 40.0%
ACGACACCAACAGATTATGA+CGG - chr1_4:65917852-65917871 None:intergenic 40.0%
GAAAGATAGTATGGAACGCA+AGG + chr1_4:65917972-65917991 Msa0178570:intron 40.0%
GATCCAAAATCCAAACAGTG+TGG + chr1_4:65918306-65918325 Msa0178570:intron 40.0%
! CATCCACACTGTTTGGATTT+TGG - chr1_4:65918312-65918331 None:intergenic 40.0%
CAAAATCCAAACAGTGTGGA+TGG + chr1_4:65918310-65918329 Msa0178570:intron 40.0%
! TGGGTGTGATTTGTGATAGA+AGG + chr1_4:65918330-65918349 Msa0178570:intron 40.0%
AAGGTCTTTGTCGCAAATGT+TGG + chr1_4:65918446-65918465 Msa0178570:intron 40.0%
CTTTGTCGCAAATGTTGGAA+TGG + chr1_4:65918451-65918470 Msa0178570:intron 40.0%
GAATCATCGCAGATGAAGTT+TGG + chr1_4:65918525-65918544 Msa0178570:intron 40.0%
!!! GAAGGCGATGTTTTGGAAAA+GGG + chr1_4:65918676-65918695 Msa0178570:intron 40.0%
AATTACACTAACCTCCCCTA+AGG + chr1_4:65918701-65918720 Msa0178570:intron 40.0%
! ATTTAAGACAACCTTAGGGG+AGG - chr1_4:65918715-65918734 None:intergenic 40.0%
ATAGCCCTAGAAGTTGCATA+CGG + chr1_4:65919041-65919060 Msa0178570:intron 40.0%
AAAGCCGTATGCAACTTCTA+GGG - chr1_4:65919048-65919067 None:intergenic 40.0%
CATGGCTGATGCAATTCAAA+AGG - chr1_4:65919228-65919247 None:intergenic 40.0%
! GGTCAATGTAATTTGCCCTT+TGG + chr1_4:65919449-65919468 Msa0178570:intron 40.0%
! CTTTTCTCAATAGGTGGGAT+TGG - chr1_4:65919566-65919585 None:intergenic 40.0%
CAATCCCACCTATTGAGAAA+AGG + chr1_4:65919564-65919583 Msa0178570:intron 40.0%
! AAAAGTTTTACAGCACCAGG+AGG - chr1_4:65919611-65919630 None:intergenic 40.0%
! GACAAAAGTTTTACAGCACC+AGG - chr1_4:65919614-65919633 None:intergenic 40.0%
! CGGATTCAGATAGTTAGCTT+TGG + chr1_4:65919919-65919938 Msa0178570:intron 40.0%
CACCTGTTGGAACATCAATA+TGG - chr1_4:65920107-65920126 None:intergenic 40.0%
TGAACATACACTTCACCTGT+TGG - chr1_4:65920120-65920139 None:intergenic 40.0%
GTCAAAGAAGGCAAATCCTA+AGG + chr1_4:65920303-65920322 Msa0178570:intron 40.0%
AAGTGGTTACCCAGAAGAAA+GGG + chr1_4:65920354-65920373 Msa0178570:CDS 40.0%
TAACTCCATCCCTTTCTTCT+GGG - chr1_4:65920366-65920385 None:intergenic 40.0%
TTAACTCCATCCCTTTCTTC+TGG - chr1_4:65920367-65920386 None:intergenic 40.0%
AGCAAGGGAATAAAACCTCT+TGG - chr1_4:65920504-65920523 None:intergenic 40.0%
TGAGAGGACCATTAGCATTT+GGG + chr1_4:65920647-65920666 Msa0178570:intron 40.0%
GTTCAGTTCCCAAATGCTAA+TGG - chr1_4:65920658-65920677 None:intergenic 40.0%
GGAGACAATTCTCCTTACAA+GGG - chr1_4:65920710-65920729 None:intergenic 40.0%
AGGAGACAATTCTCCTTACA+AGG - chr1_4:65920711-65920730 None:intergenic 40.0%
ATATGGATACGTACAGGTTG+TGG + chr1_4:65920834-65920853 Msa0178570:intron 40.0%
TATGGATACGTACAGGTTGT+GGG + chr1_4:65920835-65920854 Msa0178570:intron 40.0%
GCTATAAGAAGCAGACAAAG+AGG + chr1_4:65920937-65920956 Msa0178570:CDS 40.0%
TGGATAGGCTTATCAGAATC+TGG - chr1_4:65920982-65921001 None:intergenic 40.0%
TTCTGATAAGCCTATCCAAC+GGG + chr1_4:65920984-65921003 Msa0178570:CDS 40.0%
!!! CTTTTAGAATCCCGTTGGAT+AGG - chr1_4:65920997-65921016 None:intergenic 40.0%
CTATCCAACGGGATTCTAAA+AGG + chr1_4:65920995-65921014 Msa0178570:CDS 40.0%
!!! TTACCCTTTTAGAATCCCGT+TGG - chr1_4:65921002-65921021 None:intergenic 40.0%
CGAAATTCAGTGAAGTGCAA+TGG - chr1_4:65921126-65921145 None:intergenic 40.0%
TTCGCTTATGAAATACTGGC+AGG + chr1_4:65921142-65921161 Msa0178570:intron 40.0%
TATGCGTGAGTTAGTTAGCA+AGG + chr1_4:65921331-65921350 Msa0178570:CDS 40.0%
ACTTTCCAAAACAGAGCCAT+CGG - chr1_4:65921369-65921388 None:intergenic 40.0%
!!! GGAAAGTTTTGAAGCGGAAA+AGG + chr1_4:65921382-65921401 Msa0178570:CDS 40.0%
!! ACTACTGCTTTTCTTTCACC+AGG - chr1_4:65921428-65921447 None:intergenic 40.0%
TAACATGAGTGCAAACCAGT+TGG + chr1_4:65921454-65921473 Msa0178570:CDS 40.0%
TCCTTTCAAACGAAGTTGCA+TGG - chr1_4:65921489-65921508 None:intergenic 40.0%
CTAATGGTAAGCCCATAAGA+CGG + chr1_4:65921530-65921549 Msa0178570:intron 40.0%
TAATGGTAAGCCCATAAGAC+GGG + chr1_4:65921531-65921550 Msa0178570:intron 40.0%
!!! AAGGGTTTTGAACACAAAGC+AGG + chr1_4:65921720-65921739 Msa0178570:CDS 40.0%
!!! AGGGTTTTGAACACAAAGCA+GGG + chr1_4:65921721-65921740 Msa0178570:CDS 40.0%
!! AGGGAAGTTCTAGTTCTAGA+AGG + chr1_4:65921776-65921795 Msa0178570:CDS 40.0%
ATTCAAGGTATGCTATGCAG+AGG + chr1_4:65922089-65922108 Msa0178570:intron 40.0%
AAGAGTAGAAAGAAGCAAGG+AGG + chr1_4:65922244-65922263 Msa0178570:CDS 40.0%
AAAGAGGCAACGTTCTTTCT+GGG - chr1_4:65922320-65922339 None:intergenic 40.0%
AAAAGAGGCAACGTTCTTTC+TGG - chr1_4:65922321-65922340 None:intergenic 40.0%
ATGGACACAACAAGATGCAT+CGG - chr1_4:65922364-65922383 None:intergenic 40.0%
CATATCTTATGTTGCCACAG+TGG + chr1_4:65922395-65922414 Msa0178570:CDS 40.0%
GGTAAAATACAGCAATGACC+AGG - chr1_4:65922433-65922452 None:intergenic 40.0%
! TGGTGGTTGTTGTTGTTGTT+TGG + chr1_4:65922779-65922798 Msa0178570:intron 40.0%
GCATGAATCAGCTACAAGAA+CGG + chr1_4:65922941-65922960 Msa0178570:intron 40.0%
! AACGGTGGATGATAATGTGT+GGG + chr1_4:65922959-65922978 Msa0178570:CDS 40.0%
! TCTTGAAACTGTGATGGGAT+TGG + chr1_4:65923049-65923068 Msa0178570:CDS 40.0%
TTAGCAACATCTTTGGGTAC+AGG - chr1_4:65923110-65923129 None:intergenic 40.0%
ACCCAAAGATGTTGCTAAAG+AGG + chr1_4:65923112-65923131 Msa0178570:CDS 40.0%
GCCTCTTTAGCAACATCTTT+GGG - chr1_4:65923116-65923135 None:intergenic 40.0%
AGCCTCTTTAGCAACATCTT+TGG - chr1_4:65923117-65923136 None:intergenic 40.0%
AACATCATCAGTGTTCCATG+GGG + chr1_4:65923306-65923325 Msa0178570:intron 40.0%
!!! TCAACTTTTTGGGGTGTCTT+GGG + chr1_4:65923749-65923768 Msa0178570:intron 40.0%
ACATTAGGTTCCCTTATACG+AGG + chr1_4:65923813-65923832 Msa0178570:intron 40.0%
TTCCCTTATACGAGGACATT+TGG + chr1_4:65923821-65923840 Msa0178570:intron 40.0%
CATCCAAATGTCCTCGTATA+AGG - chr1_4:65923827-65923846 None:intergenic 40.0%
GACATTTGGATGACCTAACT+AGG + chr1_4:65923835-65923854 Msa0178570:intron 40.0%
AGCAATCAGTGTAGACTGTA+TGG - chr1_4:65923942-65923961 None:intergenic 40.0%
TGGTTTAGTGTGAGATTTGC+CGG + chr1_4:65924007-65924026 Msa0178570:intron 40.0%
TTTGCCGGATCTTAAAACTG+CGG + chr1_4:65924022-65924041 Msa0178570:intron 40.0%
!!! ACATCCGCAGTTTTAAGATC+CGG - chr1_4:65924029-65924048 None:intergenic 40.0%
GCGGATGTCATGTTTAGATA+TGG + chr1_4:65924041-65924060 Msa0178570:intron 40.0%
! GGATGGATGTCTCAGATTTT+AGG - chr1_4:65924084-65924103 None:intergenic 40.0%
ATAAAGGACAGGGATGATAG+TGG + chr1_4:65924134-65924153 Msa0178570:intron 40.0%
!!! TACCCACCTTGTTTTCCTTT+GGG + chr1_4:65924524-65924543 Msa0178570:intron 40.0%
ATCCCAAAGGAAAACAAGGT+GGG - chr1_4:65924529-65924548 None:intergenic 40.0%
AAAAACGGACGGTGAGTTTA+TGG - chr1_4:65924647-65924666 None:intergenic 40.0%
TTGATGAAGCAGAAGATGAG+TGG + chr1_4:65924690-65924709 Msa0178570:CDS 40.0%
ACTCATTGATACGAGTCAGA+AGG + chr1_4:65924733-65924752 Msa0178570:CDS 40.0%
CTCATTGATACGAGTCAGAA+GGG + chr1_4:65924734-65924753 Msa0178570:CDS 40.0%
TTTACGCAACTCAATTCCCA+AGG + chr1_4:65924757-65924776 Msa0178570:CDS 40.0%
!! CTTGGGTTGAATGTCATTAG+AGG + chr1_4:65924863-65924882 Msa0178570:CDS 40.0%
!!! TTGCTAGCTTTTCCAAAGAC+TGG + chr1_4:65924960-65924979 Msa0178570:CDS 40.0%
!!! TGCTAGCTTTTCCAAAGACT+GGG + chr1_4:65924961-65924980 Msa0178570:CDS 40.0%
GTCAAAATGATCCCAGTCTT+TGG - chr1_4:65924975-65924994 None:intergenic 40.0%
!! AAGACTGGGATCATTTTGAC+TGG + chr1_4:65924975-65924994 Msa0178570:CDS 40.0%
AACTAGCATCTCTTGGCAAT+TGG - chr1_4:65925106-65925125 None:intergenic 40.0%
CTATGATTCTCATAAAGCCC+GGG - chr1_4:65925165-65925184 None:intergenic 40.0%
CCTATGATTCTCATAAAGCC+CGG - chr1_4:65925166-65925185 None:intergenic 40.0%
!! GAAGTTTTGTGGTGAATCCG+GGG - chr1_4:65916474-65916493 None:intergenic 45.0%
!! GGAAGTTTTGTGGTGAATCC+GGG - chr1_4:65916475-65916494 None:intergenic 45.0%
!! GGGAAGTTTTGTGGTGAATC+CGG - chr1_4:65916476-65916495 None:intergenic 45.0%
AAAGAAGGAAGGAGAGGTTG+TGG - chr1_4:65916554-65916573 None:intergenic 45.0%
GAAAGGAAAGAAGGAAGGAG+AGG - chr1_4:65916560-65916579 None:intergenic 45.0%
!! GTGTAGAATGGTAGTGGAGT+GGG - chr1_4:65916587-65916606 None:intergenic 45.0%
! AGAAGGGTGTAGAATGGTAG+TGG - chr1_4:65916593-65916612 None:intergenic 45.0%
CACAGCAGGGATATACGATT+AGG - chr1_4:65916851-65916870 None:intergenic 45.0%
! TTCTCAACCCTTGCTGATTG+AGG + chr1_4:65916929-65916948 Msa0178570:intron 45.0%
AACTCTACAAACCTGGTCAC+GGG - chr1_4:65917117-65917136 None:intergenic 45.0%
CTAGGTACAAGATGGGAACT+TGG + chr1_4:65917225-65917244 Msa0178570:intron 45.0%
AAGGGTCCAGAAAGAAGAAG+TGG + chr1_4:65917353-65917372 Msa0178570:CDS 45.0%
CAACTGAAAGTGAAAGCGAC+CGG + chr1_4:65917407-65917426 Msa0178570:CDS 45.0%
AACTGAAAGTGAAAGCGACC+GGG + chr1_4:65917408-65917427 Msa0178570:CDS 45.0%
ACCGGGATGATAAGAAACGA+AGG + chr1_4:65917425-65917444 Msa0178570:CDS 45.0%
GCCTTCGTTTCTTATCATCC+CGG - chr1_4:65917429-65917448 None:intergenic 45.0%
GGGATGATAAGAAACGAAGG+CGG + chr1_4:65917428-65917447 Msa0178570:CDS 45.0%
TGATAAGAAACGAAGGCGGA+AGG + chr1_4:65917432-65917451 Msa0178570:CDS 45.0%
GATAAGAAACGAAGGCGGAA+GGG + chr1_4:65917433-65917452 Msa0178570:CDS 45.0%
AGAAAAGAGATGGACGGTCA+AGG + chr1_4:65917461-65917480 Msa0178570:CDS 45.0%
ACGGTCAAGGAGTGGTAAAA+AGG + chr1_4:65917474-65917493 Msa0178570:CDS 45.0%
TCTTCTTCAGATGGCAGTGA+TGG + chr1_4:65917520-65917539 Msa0178570:CDS 45.0%
AGATGGCAGTGATGGTTCTT+TGG + chr1_4:65917528-65917547 Msa0178570:CDS 45.0%
GATGGCAGTGATGGTTCTTT+GGG + chr1_4:65917529-65917548 Msa0178570:CDS 45.0%
AGCGGAGAGAACAAGATCAA+AGG + chr1_4:65917592-65917611 Msa0178570:CDS 45.0%
! GCCAGCTGTTTCAGAAACAA+AGG + chr1_4:65917681-65917700 Msa0178570:CDS 45.0%
AAAGGAGATATTGCCAGAGG+AGG + chr1_4:65917699-65917718 Msa0178570:CDS 45.0%
CTAAGACATACCTCCTCAAC+CGG - chr1_4:65917727-65917746 None:intergenic 45.0%
TTTGAACAGCTGAGGGGAAA+TGG - chr1_4:65917759-65917778 None:intergenic 45.0%
GCTAGACATTTGAACAGCTG+AGG - chr1_4:65917767-65917786 None:intergenic 45.0%
CGACACCAACAGATTATGAC+GGG - chr1_4:65917851-65917870 None:intergenic 45.0%
ATGCTAACAAGTGCCCTTTG+TGG + chr1_4:65918076-65918095 Msa0178570:intron 45.0%
! GGCACTTGCTAAGAAGTCAA+AGG - chr1_4:65918199-65918218 None:intergenic 45.0%
ACTTCTTAGCAAGTGCCCTT+AGG + chr1_4:65918202-65918221 Msa0178570:intron 45.0%
CTTCTTAGCAAGTGCCCTTA+GGG + chr1_4:65918203-65918222 Msa0178570:intron 45.0%
AATGCTAACAGGTGCCCTAA+GGG - chr1_4:65918220-65918239 None:intergenic 45.0%
AAATGCTAACAGGTGCCCTA+AGG - chr1_4:65918221-65918240 None:intergenic 45.0%
AGCCCTTATCGTAGCAAAGA+TGG + chr1_4:65918550-65918569 Msa0178570:intron 45.0%
TGGAGGAGCTCTATTTAGGA+GGG + chr1_4:65918619-65918638 Msa0178570:intron 45.0%
!!! GGAAGGCGATGTTTTGGAAA+AGG + chr1_4:65918675-65918694 Msa0178570:intron 45.0%
! ATGGTGTTAAGATGGAAGGG+AGG - chr1_4:65918808-65918827 None:intergenic 45.0%
GAAAGCCGTATGCAACTTCT+AGG - chr1_4:65919049-65919068 None:intergenic 45.0%
! GACGCCTTTTCTCAATAGGT+GGG - chr1_4:65919571-65919590 None:intergenic 45.0%
! CACCTATTGAGAAAAGGCGT+CGG + chr1_4:65919570-65919589 Msa0178570:intron 45.0%
! AACCGACGCCTTTTCTCAAT+AGG - chr1_4:65919575-65919594 None:intergenic 45.0%
! TTGTTGTTGCATTGTCCTCC+TGG + chr1_4:65919593-65919612 Msa0178570:intron 45.0%
GAAGTTGTTGTCGAGTGACT+AGG - chr1_4:65919739-65919758 None:intergenic 45.0%
CTCATGCAGAAGAAAGCCAA+AGG - chr1_4:65919976-65919995 None:intergenic 45.0%
GAAGTGGTTACCCAGAAGAA+AGG + chr1_4:65920353-65920372 Msa0178570:CDS 45.0%
GAAAGGGATGGAGTTAACGT+TGG + chr1_4:65920370-65920389 Msa0178570:CDS 45.0%
TTCTATCGTCCTCCCTTGTT+GGG + chr1_4:65920404-65920423 Msa0178570:CDS 45.0%
AGGACAGAAGGATCTTTGCT+TGG + chr1_4:65920579-65920598 Msa0178570:intron 45.0%
GTGAGAGGACCATTAGCATT+TGG + chr1_4:65920646-65920665 Msa0178570:intron 45.0%
AAGGAGAGTAGTAACTCCGA+TGG + chr1_4:65921350-65921369 Msa0178570:CDS 45.0%
!! TAACTCCGATGGCTCTGTTT+TGG + chr1_4:65921361-65921380 Msa0178570:CDS 45.0%
TCTCCAGATGTAGACATACC+TGG + chr1_4:65921407-65921426 Msa0178570:CDS 45.0%
TCACCAGGTATGTCTACATC+TGG - chr1_4:65921413-65921432 None:intergenic 45.0%
GCCATGCAACTTCGTTTGAA+AGG + chr1_4:65921485-65921504 Msa0178570:CDS 45.0%
TGCATACTCTCCCGTCTTAT+GGG - chr1_4:65921544-65921563 None:intergenic 45.0%
ATGCATACTCTCCCGTCTTA+TGG - chr1_4:65921545-65921564 None:intergenic 45.0%
CCTGCCCACCAAAACAATAA+TGG - chr1_4:65921693-65921712 None:intergenic 45.0%
!!! CCATTATTGTTTTGGTGGGC+AGG + chr1_4:65921690-65921709 Msa0178570:intron 45.0%
TTCTGAGCAGAAGAAAGGAG+AGG + chr1_4:65922117-65922136 Msa0178570:CDS 45.0%
TGAATCAGCTACAAGAACGG+TGG + chr1_4:65922944-65922963 Msa0178570:CDS 45.0%
! GAACGGTGGATGATAATGTG+TGG + chr1_4:65922958-65922977 Msa0178570:CDS 45.0%
! ACGGTGGATGATAATGTGTG+GGG + chr1_4:65922960-65922979 Msa0178570:CDS 45.0%
!!! GTCAACTTTTTGGGGTGTCT+TGG + chr1_4:65923748-65923767 Msa0178570:intron 45.0%
ATGACCTAACTAGGAGACGA+TGG + chr1_4:65923844-65923863 Msa0178570:intron 45.0%
TGACCTAACTAGGAGACGAT+GGG + chr1_4:65923845-65923864 Msa0178570:intron 45.0%
! AGCAGGTATGCTTCACCTTT+TGG - chr1_4:65923885-65923904 None:intergenic 45.0%
GTACTCGGACTCAATGCATT+AGG + chr1_4:65923984-65924003 Msa0178570:intron 45.0%
!!! TTTTTTTTTGGGGGGTGGGA+TGG - chr1_4:65924101-65924120 None:intergenic 45.0%
GAACCTGCAGAATCTGAACA+GGG + chr1_4:65924470-65924489 Msa0178570:intron 45.0%
AGGAAAACAAGGTGGGTAGA+TGG - chr1_4:65924522-65924541 None:intergenic 45.0%
!!! CTACCCACCTTGTTTTCCTT+TGG + chr1_4:65924523-65924542 Msa0178570:intron 45.0%
GATCCCAAAGGAAAACAAGG+TGG - chr1_4:65924530-65924549 None:intergenic 45.0%
! TGAGTCTTTTGGCATTGTGC+TGG - chr1_4:65924718-65924737 None:intergenic 45.0%
! CATTAGAGGCATGCTGCATT+TGG + chr1_4:65924877-65924896 Msa0178570:CDS 45.0%
! ACGTCAAAGGTACGAGAAAG+TGG + chr1_4:65924919-65924938 Msa0178570:CDS 45.0%
! TCAAAGGTACGAGAAAGTGG+AGG + chr1_4:65924922-65924941 Msa0178570:CDS 45.0%
GTGGAGAAACTAGCATCTCT+TGG - chr1_4:65925113-65925132 None:intergenic 45.0%
! CCGGGCTTTATGAGAATCAT+AGG + chr1_4:65925163-65925182 Msa0178570:three_prime_UTR 45.0%
!!! TTTAAAATTTGTTTATTTTA+TGG + chr1_4:65918981-65919000 Msa0178570:intron 5.0%
!! AAACAAAATAAATAAATAAA+TGG - chr1_4:65923502-65923521 None:intergenic 5.0%
! AGGGGAAGAGGGAAGTTTTG+TGG - chr1_4:65916485-65916504 None:intergenic 50.0%
GCTGCGAAAGGAAAGAAGGA+AGG - chr1_4:65916565-65916584 None:intergenic 50.0%
!! GGTGTAGAATGGTAGTGGAG+TGG - chr1_4:65916588-65916607 None:intergenic 50.0%
!! GAGACCTTGCGTTTTCGAGA+CGG - chr1_4:65916629-65916648 None:intergenic 50.0%
GGTACTTCGTGGTCGTATGA+GGG - chr1_4:65916688-65916707 None:intergenic 50.0%
TGGTACTTCGTGGTCGTATG+AGG - chr1_4:65916689-65916708 None:intergenic 50.0%
GGCTGCAAATTGGTACTTCG+TGG - chr1_4:65916699-65916718 None:intergenic 50.0%
ACGATTAGGACCCCAATTGC+AGG - chr1_4:65916837-65916856 None:intergenic 50.0%
GAAATTCATTCCCCGTGACC+AGG + chr1_4:65917103-65917122 Msa0178570:CDS 50.0%
ACTCTACAAACCTGGTCACG+GGG - chr1_4:65917116-65917135 None:intergenic 50.0%
ATGGTTCTTTGGGTCGCCAA+CGG + chr1_4:65917539-65917558 Msa0178570:CDS 50.0%
GATATTGCCAGAGGAGGTTC+CGG + chr1_4:65917705-65917724 Msa0178570:CDS 50.0%
TCACACCCATCCACACTGTT+TGG - chr1_4:65918319-65918338 None:intergenic 50.0%
AACATGTGTGCCGAAAGACG+TGG + chr1_4:65918599-65918618 Msa0178570:intron 50.0%
TAGAGCTCCTCCACGTCTTT+CGG - chr1_4:65918612-65918631 None:intergenic 50.0%
GACGTGGAGGAGCTCTATTT+AGG + chr1_4:65918615-65918634 Msa0178570:intron 50.0%
GTGGAGGAGCTCTATTTAGG+AGG + chr1_4:65918618-65918637 Msa0178570:intron 50.0%
! CATCGCCTTCCACTGACTAT+TGG - chr1_4:65918666-65918685 None:intergenic 50.0%
! GTCAGTGGAAGGCGATGTTT+TGG + chr1_4:65918669-65918688 Msa0178570:intron 50.0%
! CGACGCCTTTTCTCAATAGG+TGG - chr1_4:65919572-65919591 None:intergenic 50.0%
CAACAACAGAAGGAGAGCCT+TGG - chr1_4:65919772-65919791 None:intergenic 50.0%
GGTTACCCAGAAGAAAGGGA+TGG + chr1_4:65920358-65920377 Msa0178570:CDS 50.0%
CTTCTATCGTCCTCCCTTGT+TGG + chr1_4:65920403-65920422 Msa0178570:CDS 50.0%
TCTATCGTCCTCCCTTGTTG+GGG + chr1_4:65920405-65920424 Msa0178570:CDS 50.0%
ACGTACAGGTTGTGGGAGAA+AGG + chr1_4:65920842-65920861 Msa0178570:intron 50.0%
TACAGGTTGTGGGAGAAAGG+TGG + chr1_4:65920845-65920864 Msa0178570:intron 50.0%
ACAGGTTGTGGGAGAAAGGT+GGG + chr1_4:65920846-65920865 Msa0178570:intron 50.0%
! TTCATTTCATGGTGCCGAGG+AGG - chr1_4:65921185-65921204 None:intergenic 50.0%
! GCTTTCATTTCATGGTGCCG+AGG - chr1_4:65921188-65921207 None:intergenic 50.0%
!! AAGCCAGTTTGCTGTAGCTG+AGG + chr1_4:65921247-65921266 Msa0178570:CDS 50.0%
!! AGCCAGTTTGCTGTAGCTGA+GGG + chr1_4:65921248-65921267 Msa0178570:CDS 50.0%
TGCAAACCAGTTGGCAGCTA+AGG + chr1_4:65921463-65921482 Msa0178570:CDS 50.0%
! ACAAGATGCATCGGCCGATT+TGG - chr1_4:65922355-65922374 None:intergenic 50.0%
TGCGTGTTCGGAAGTAACCT+TGG + chr1_4:65922679-65922698 Msa0178570:intron 50.0%
! AAGCCTTATCCCACCAAGTG+GGG - chr1_4:65922760-65922779 None:intergenic 50.0%
! CAAGCCTTATCCCACCAAGT+GGG - chr1_4:65922761-65922780 None:intergenic 50.0%
TCAGTGTTCCATGGGGAGTA+AGG + chr1_4:65923313-65923332 Msa0178570:intron 50.0%
CAGTGTTCCATGGGGAGTAA+GGG + chr1_4:65923314-65923333 Msa0178570:intron 50.0%
ATGGGGAGTAAGGGATCTGA+GGG + chr1_4:65923323-65923342 Msa0178570:intron 50.0%
GTAAGGGATCTGAGGGATGT+TGG + chr1_4:65923330-65923349 Msa0178570:intron 50.0%
ATCTGAGGGATGTTGGATCG+TGG + chr1_4:65923337-65923356 Msa0178570:intron 50.0%
CATTGAGTCCGAGTACTCCA+TGG - chr1_4:65923980-65923999 None:intergenic 50.0%
CTCGGACTCAATGCATTAGG+TGG + chr1_4:65923987-65924006 Msa0178570:intron 50.0%
!! GGATGATAGTGGCACGTGTT+AGG + chr1_4:65924145-65924164 Msa0178570:intron 50.0%
TCTGATGATTGCGCCACATG+TGG + chr1_4:65924429-65924448 Msa0178570:intron 50.0%
CGAACCTGCAGAATCTGAAC+AGG + chr1_4:65924469-65924488 Msa0178570:intron 50.0%
CAACCCTGTTCAGATTCTGC+AGG - chr1_4:65924476-65924495 None:intergenic 50.0%
CTACTGCCGGAGAATAGGGA+CGG - chr1_4:65916526-65916545 None:intergenic 55.0%
GAAGGAAGGAGAGGTTGTGG+CGG - chr1_4:65916551-65916570 None:intergenic 55.0%
! GTGGGCTGCGAAAGGAAAGA+AGG - chr1_4:65916569-65916588 None:intergenic 55.0%
CTCTCCGTCTCGAAAACGCA+AGG + chr1_4:65916622-65916641 Msa0178570:five_prime_UTR 55.0%
TGGCAGTTCACGCAACAGAG+TGG - chr1_4:65916654-65916673 None:intergenic 55.0%
ACTTCGTGGTCGTATGAGGG+CGG - chr1_4:65916685-65916704 None:intergenic 55.0%
AGAGATGGACGGTCAAGGAG+TGG + chr1_4:65917466-65917485 Msa0178570:CDS 55.0%
ATGTGTGCCGAAAGACGTGG+AGG + chr1_4:65918602-65918621 Msa0178570:intron 55.0%
TGCTCCTCCATCCCCAACAA+GGG - chr1_4:65920419-65920438 None:intergenic 55.0%
TTGCTCCTCCATCCCCAACA+AGG - chr1_4:65920420-65920439 None:intergenic 55.0%
TTGGGGATGGAGGAGCAAGT+TGG + chr1_4:65920422-65920441 Msa0178570:CDS 55.0%
CAAGAGCAAGCAGCTCGAGA+AGG + chr1_4:65920469-65920488 Msa0178570:CDS 55.0%
AGAAGGACGAAGCTGCCAAG+AGG + chr1_4:65920486-65920505 Msa0178570:CDS 55.0%
CAGGTTGTGGGAGAAAGGTG+GGG + chr1_4:65920847-65920866 Msa0178570:intron 55.0%
GGAGAAAGGTGGGGTTCTCT+TGG + chr1_4:65920856-65920875 Msa0178570:CDS 55.0%
CTAAAGCAGCTGCACCAGCT+CGG + chr1_4:65920902-65920921 Msa0178570:CDS 55.0%
TAAAGCAGCTGCACCAGCTC+GGG + chr1_4:65920903-65920922 Msa0178570:CDS 55.0%
CACCCTCAGCTACAGCAAAC+TGG - chr1_4:65921253-65921272 None:intergenic 55.0%
! TTGGTGGGCAGGAAGAAGCA+AGG + chr1_4:65921701-65921720 Msa0178570:intron 55.0%
! TGGTGGGCAGGAAGAAGCAA+GGG + chr1_4:65921702-65921721 Msa0178570:intron 55.0%
ACAGCAATGACCAGGCACCA+CGG - chr1_4:65922425-65922444 None:intergenic 55.0%
CTTATCCCACCAAGTGGGGT+CGG - chr1_4:65922756-65922775 None:intergenic 55.0%
! CCAAGCCTTATCCCACCAAG+TGG - chr1_4:65922762-65922781 None:intergenic 55.0%
! CCACTTGGTGGGATAAGGCT+TGG + chr1_4:65922759-65922778 Msa0178570:intron 55.0%
CTTGGTGGGATAAGGCTTGG+TGG + chr1_4:65922762-65922781 Msa0178570:intron 55.0%
! TGATGGGATTGGCGCAGCAA+CGG + chr1_4:65923060-65923079 Msa0178570:CDS 55.0%
CTCAGATCCCTTACTCCCCA+TGG - chr1_4:65923324-65923343 None:intergenic 55.0%
CATGGGGAGTAAGGGATCTG+AGG + chr1_4:65923322-65923341 Msa0178570:intron 55.0%
TGAGGGATGTTGGATCGTGG+TGG + chr1_4:65923340-65923359 Msa0178570:intron 55.0%
! GGATGTTGGATCGTGGTGGA+GGG + chr1_4:65923344-65923363 Msa0178570:intron 55.0%
! TTGGATCGTGGTGGAGGGTT+TGG + chr1_4:65923349-65923368 Msa0178570:intron 55.0%
! TGGATCGTGGTGGAGGGTTT+GGG + chr1_4:65923350-65923369 Msa0178570:intron 55.0%
TGGTGGAGGGTTTGGGGAAA+TGG + chr1_4:65923357-65923376 Msa0178570:intron 55.0%
TGGCCCATCGTCTCCTAGTT+AGG - chr1_4:65923851-65923870 None:intergenic 55.0%
AGGCATGCTGCATTTGGCTG+AGG + chr1_4:65924883-65924902 Msa0178570:CDS 55.0%
TTCCCTCTTCCCCTCCTACC+AGG + chr1_4:65916491-65916510 Msa0178570:five_prime_UTR 60.0%
AGCCTGGTAGGAGGGGAAGA+GGG - chr1_4:65916496-65916515 None:intergenic 60.0%
TGCCGGAGAATAGGGACGGT+GGG - chr1_4:65916522-65916541 None:intergenic 60.0%
GGCGCTACTGCCGGAGAATA+GGG - chr1_4:65916530-65916549 None:intergenic 60.0%
!! GTAGTGGAGTGGGCTGCGAA+AGG - chr1_4:65916577-65916596 None:intergenic 60.0%
TCCTCAACCGGAACCTCCTC+TGG - chr1_4:65917715-65917734 None:intergenic 60.0%
AGAGGAGGTTCCGGTTGAGG+AGG + chr1_4:65917714-65917733 Msa0178570:CDS 60.0%
TCGTCCTCCCTTGTTGGGGA+TGG + chr1_4:65920409-65920428 Msa0178570:CDS 60.0%
TCCTCCCTTGTTGGGGATGG+AGG + chr1_4:65920412-65920431 Msa0178570:CDS 60.0%
TCCTCCATCCCCAACAAGGG+AGG - chr1_4:65920416-65920435 None:intergenic 60.0%
GCATGTAGATGAGCCCGAGC+TGG - chr1_4:65920919-65920938 None:intergenic 60.0%
! GCATGGCCTTAGCTGCCAAC+TGG - chr1_4:65921472-65921491 None:intergenic 60.0%
CAGCAATGACCAGGCACCAC+GGG - chr1_4:65922424-65922443 None:intergenic 60.0%
TCCATGTAGCCGACCCCACT+TGG + chr1_4:65922744-65922763 Msa0178570:intron 60.0%
ACCAAGTGGGGTCGGCTACA+TGG - chr1_4:65922748-65922767 None:intergenic 60.0%
ATGTAGCCGACCCCACTTGG+TGG + chr1_4:65922747-65922766 Msa0178570:intron 60.0%
TGTAGCCGACCCCACTTGGT+GGG + chr1_4:65922748-65922767 Msa0178570:intron 60.0%
! CGACCCCACTTGGTGGGATA+AGG + chr1_4:65922754-65922773 Msa0178570:intron 60.0%
!! GCAGCAACGGAGGCATTGCA+TGG + chr1_4:65923073-65923092 Msa0178570:CDS 60.0%
GGGATGTTGGATCGTGGTGG+AGG + chr1_4:65923343-65923362 Msa0178570:intron 60.0%
! GGATCGTGGTGGAGGGTTTG+GGG + chr1_4:65923351-65923370 Msa0178570:intron 60.0%
CAGCCTGGTAGGAGGGGAAG+AGG - chr1_4:65916497-65916516 None:intergenic 65.0%
CCGGAGAATAGGGACGGTGG+GGG - chr1_4:65916520-65916539 None:intergenic 65.0%
CCCCCACCGTCCCTATTCTC+CGG + chr1_4:65916517-65916536 Msa0178570:five_prime_UTR 65.0%
GCCGGAGAATAGGGACGGTG+GGG - chr1_4:65916521-65916540 None:intergenic 65.0%
CTGCCGGAGAATAGGGACGG+TGG - chr1_4:65916523-65916542 None:intergenic 65.0%
CGGCGCTACTGCCGGAGAAT+AGG - chr1_4:65916531-65916550 None:intergenic 65.0%
! GTATGAGGGCGGAGGCGCAA+TGG - chr1_4:65916674-65916693 None:intergenic 65.0%
TCGTGGTCGTATGAGGGCGG+AGG - chr1_4:65916682-65916701 None:intergenic 65.0%
GCCAGAGGAGGTTCCGGTTG+AGG + chr1_4:65917711-65917730 Msa0178570:CDS 65.0%
! TGGGATTGGCGCAGCAACGG+AGG + chr1_4:65923063-65923082 Msa0178570:CDS 65.0%
TGGGGGCAGCCTGGTAGGAG+GGG - chr1_4:65916503-65916522 None:intergenic 70.0%
GTGGGGGCAGCCTGGTAGGA+GGG - chr1_4:65916504-65916523 None:intergenic 70.0%
GGTTGTGGCGGCGCTACTGC+CGG - chr1_4:65916539-65916558 None:intergenic 70.0%
GTTGCCACAGTGGCAGCCCG+TGG + chr1_4:65922405-65922424 Msa0178570:CDS 70.0%
GGTGGGGGCAGCCTGGTAGG+AGG - chr1_4:65916505-65916524 None:intergenic 75.0%
GACGGTGGGGGCAGCCTGGT+AGG - chr1_4:65916508-65916527 None:intergenic 75.0%
TAGGGACGGTGGGGGCAGCC+TGG - chr1_4:65916512-65916531 None:intergenic 75.0%
! GGCACCACGGGCTGCCACTG+TGG - chr1_4:65922412-65922431 None:intergenic 75.0%
CAGTGGCAGCCCGTGGTGCC+TGG + chr1_4:65922412-65922431 Msa0178570:CDS 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 65916435 65925305 65916435 ID=Msa0178570;Name=Msa0178570
chr1_4 mRNA 65916435 65925305 65916435 ID=Msa0178570-mRNA-1;Parent=Msa0178570;Name=Msa0178570-mRNA-1;_AED=0.01;_eAED=0.01;_QI=338|1|1|1|0.88|0.8|10|281|762
chr1_4 exon 65916435 65916744 65916435 ID=Msa0178570-mRNA-1:exon:21483;Parent=Msa0178570-mRNA-1
chr1_4 exon 65917061 65917124 65917061 ID=Msa0178570-mRNA-1:exon:21484;Parent=Msa0178570-mRNA-1
chr1_4 exon 65917229 65917735 65917229 ID=Msa0178570-mRNA-1:exon:21485;Parent=Msa0178570-mRNA-1
chr1_4 exon 65920304 65920507 65920304 ID=Msa0178570-mRNA-1:exon:21486;Parent=Msa0178570-mRNA-1
chr1_4 exon 65920850 65921017 65920850 ID=Msa0178570-mRNA-1:exon:21487;Parent=Msa0178570-mRNA-1
chr1_4 exon 65921164 65921535 65921164 ID=Msa0178570-mRNA-1:exon:21488;Parent=Msa0178570-mRNA-1
chr1_4 exon 65921712 65921797 65921712 ID=Msa0178570-mRNA-1:exon:21489;Parent=Msa0178570-mRNA-1
chr1_4 exon 65922096 65922459 65922096 ID=Msa0178570-mRNA-1:exon:21490;Parent=Msa0178570-mRNA-1
chr1_4 exon 65922942 65923154 65922942 ID=Msa0178570-mRNA-1:exon:21491;Parent=Msa0178570-mRNA-1
chr1_4 exon 65924686 65925305 65924686 ID=Msa0178570-mRNA-1:exon:21492;Parent=Msa0178570-mRNA-1
chr1_4 five_prime_UTR 65916435 65916744 65916435 ID=Msa0178570-mRNA-1:five_prime_utr;Parent=Msa0178570-mRNA-1
chr1_4 five_prime_UTR 65917061 65917088 65917061 ID=Msa0178570-mRNA-1:five_prime_utr;Parent=Msa0178570-mRNA-1
chr1_4 CDS 65917089 65917124 65917089 ID=Msa0178570-mRNA-1:cds;Parent=Msa0178570-mRNA-1
chr1_4 CDS 65917229 65917735 65917229 ID=Msa0178570-mRNA-1:cds;Parent=Msa0178570-mRNA-1
chr1_4 CDS 65920304 65920507 65920304 ID=Msa0178570-mRNA-1:cds;Parent=Msa0178570-mRNA-1
chr1_4 CDS 65920850 65921017 65920850 ID=Msa0178570-mRNA-1:cds;Parent=Msa0178570-mRNA-1
chr1_4 CDS 65921164 65921535 65921164 ID=Msa0178570-mRNA-1:cds;Parent=Msa0178570-mRNA-1
chr1_4 CDS 65921712 65921797 65921712 ID=Msa0178570-mRNA-1:cds;Parent=Msa0178570-mRNA-1
chr1_4 CDS 65922096 65922459 65922096 ID=Msa0178570-mRNA-1:cds;Parent=Msa0178570-mRNA-1
chr1_4 CDS 65922942 65923154 65922942 ID=Msa0178570-mRNA-1:cds;Parent=Msa0178570-mRNA-1
chr1_4 CDS 65924686 65925024 65924686 ID=Msa0178570-mRNA-1:cds;Parent=Msa0178570-mRNA-1
chr1_4 three_prime_UTR 65925025 65925305 65925025 ID=Msa0178570-mRNA-1:three_prime_utr;Parent=Msa0178570-mRNA-1
Gene Sequence

>Msa0178570

ATGCTTTCTGGGGTGAAATTCATTCCCCGTGACCAGGTACAAGATGGGAACTTGGATAGGGATTCTGTCTCCAAAGAAAGAAAAAAATCAGATATTAGGAGGAAAAAGGATAAGAGGAATATATCTTCTTCTGATGATGATCAGCTTGATAAGATAAAAAAAGGGTCCAGAAAGAAGAAGTGGTATTCATCTGATGAAAATTCTTCGTTTTATACAACTGAAAGTGAAAGCGACCGGGATGATAAGAAACGAAGGCGGAAGGGAAAAAAGAAAAGAGATGGACGGTCAAGGAGTGGTAAAAAGGAATATACATCTGAGGAAGACTCTTCTTCTTCAGATGGCAGTGATGGTTCTTTGGGTCGCCAACGGAAACACCAAAAGTCATGTTCAAAAGATGGGAGCGGAGAGAACAAGATCAAAGGTGAAGCTACCGATATTGCAAGAAAAGAAATGGGATTGGATTGGATGCGTAAGTCTGAAAGTAAGAGGCCAGCTGTTTCAGAAACAAAGGAGATATTGCCAGAGGAGGTTCCGGTTGAGGAGTCAAAGAAGGCAAATCCTAAGGAATTGAATCCTTATCTAAAGGATGATGGAAGTGGTTACCCAGAAGAAAGGGATGGAGTTAACGTTGGTGCAAGCAAACTTCTATCGTCCTCCCTTGTTGGGGATGGAGGAGCAAGTTGGCGACTTAAAGCTTTAAAGCGTGCACAAGAGCAAGCAGCTCGAGAAGGACGAAGCTGCCAAGAGGTTGTGGGAGAAAGGTGGGGTTCTCTTGGTGAGTTGACTGCATCTGTTGCATCTAAAGCAGCTGCACCAGCTCGGGCTCATCTACATGCTATAAGAAGCAGACAAAGAGGGGTAACTGAAGAAAATTCACCAGATTCTGATAAGCCTATCCAACGGGATTCTAAAAGGGACTACATAAAAAATACTCCTCCTCGGCACCATGAAATGAAAGCACCTAAAGTGCAAGATTCATTATCTTGGAGAAAGCGCAAAAGCCAGTTTGCTGTAGCTGAGGGTGCTGAGATCATCGCTGCTGCAGCATCTAGCTTAAATAAATTTGCTAATGATGGAAGCTTTATGCGTGAGTTAGTTAGCAAGGAGAGTAGTAACTCCGATGGCTCTGTTTTGGAAAGTTTTGAAGCGGAAAAGGTTTCTCCAGATGTAGACATACCTGGTGAAAGAAAAGCAGTAGTACAGAATAACATGAGTGCAAACCAGTTGGCAGCTAAGGCCATGCAACTTCGTTTGAAAGGAAAAAATGAAGAAGCTGATAGACTAATGGAAGAAGCAAGGGTTTTGAACACAAAGCAGGGAAATGAAGATCATGAAATTAGATCAAGAACTGAGGGAAGTTCTAGTTCTAGAAGGTATGCTATGCAGAGGATATCTTCTGAGCAGAAGAAAGGAGAGGATGATGCTGATATGCATCTTGCTCGCAATATAATGCAGAACAAGCAGTTTAAGGTTTATACTCAGGCGGATGATGAATATGACTTTGAGACTGGTCCAAGCAAAAAGAGTAGAAAGAAGCAAGGAGGTGAAGACCCCAAGAATATCCAAAAAAAGATGAATGCAAATCGGTTCTTGACCCAGAAAGAACGTTGCCTCTTTTGTCTAGAAAATCCAAATCGGCCGATGCATCTTGTTGTGTCCATTGCAAATTTCACATATCTTATGTTGCCACAGTGGCAGCCCGTGGTGCCTGGTCATTGCTGTATTTTACCCATTCACCATGAATCAGCTACAAGAACGGTGGATGATAATGTGTGGGGAGAAATCCGAAATTTCAAAAAATGTCTTATTATGATGTTTGCAAAGCAAGATAAAGAAGTAGTGTTTCTTGAAACTGTGATGGGATTGGCGCAGCAACGGAGGCATTGCATGGTTGAGTGCATTCCTGTACCCAAAGATGTTGCTAAAGAGGCTCCTTTATACTTTAAGAAGGCAATTGATGAAGCAGAAGATGAGTGGAGCCAGCACAATGCCAAAAGACTCATTGATACGAGTCAGAAGGGTTTACGCAACTCAATTCCCAAGGACTTTCCTTATTTTCATGTAGAATTTGGTCTAAACAAAGGTTTTGTCCATGTTATTGATGATGAAAAGGAGTTTAAGAGTAGTCTTGGGTTGAATGTCATTAGAGGCATGCTGCATTTGGCTGAGGAAGACATGTATAGACGTCAAAGGTACGAGAAAGTGGAGGTGCAAAAGCAAGCTGTTGCTAGCTTTTCCAAAGACTGGGATCATTTTGACTGGACAAAGCAACTAAATGAAACATCGTAG

Protein sequence

>Msa0178570

MLSGVKFIPRDQVQDGNLDRDSVSKERKKSDIRRKKDKRNISSSDDDQLDKIKKGSRKKKWYSSDENSSFYTTESESDRDDKKRRRKGKKKRDGRSRSGKKEYTSEEDSSSSDGSDGSLGRQRKHQKSCSKDGSGENKIKGEATDIARKEMGLDWMRKSESKRPAVSETKEILPEEVPVEESKKANPKELNPYLKDDGSGYPEERDGVNVGASKLLSSSLVGDGGASWRLKALKRAQEQAAREGRSCQEVVGERWGSLGELTASVASKAAAPARAHLHAIRSRQRGVTEENSPDSDKPIQRDSKRDYIKNTPPRHHEMKAPKVQDSLSWRKRKSQFAVAEGAEIIAAAASSLNKFANDGSFMRELVSKESSNSDGSVLESFEAEKVSPDVDIPGERKAVVQNNMSANQLAAKAMQLRLKGKNEEADRLMEEARVLNTKQGNEDHEIRSRTEGSSSSRRYAMQRISSEQKKGEDDADMHLARNIMQNKQFKVYTQADDEYDFETGPSKKSRKKQGGEDPKNIQKKMNANRFLTQKERCLFCLENPNRPMHLVVSIANFTYLMLPQWQPVVPGHCCILPIHHESATRTVDDNVWGEIRNFKKCLIMMFAKQDKEVVFLETVMGLAQQRRHCMVECIPVPKDVAKEAPLYFKKAIDEAEDEWSQHNAKRLIDTSQKGLRNSIPKDFPYFHVEFGLNKGFVHVIDDEKEFKSSLGLNVIRGMLHLAEEDMYRRQRYEKVEVQKQAVASFSKDWDHFDWTKQLNETS*