Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0930910 | XP_003630920.1 | 100.000 | 159 | 0 | 0 | 1 | 159 | 1 | 159 | 1.28e-113 | 328 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0930910 | sp|Q9CAB6|UEV1B_ARATH | 76.730 | 159 | 37 | 0 | 1 | 159 | 1 | 159 | 1.82e-91 | 265 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000490 | Msa0930910 | 0.809108 | 2.227101e-50 | -8.615850e-47 |
Msa0000550 | Msa0930910 | 0.833097 | 6.486116e-56 | -8.615850e-47 |
Msa0029540 | Msa0930910 | 0.861693 | 8.576657e-64 | -8.615850e-47 |
Msa0048000 | Msa0930910 | -0.819520 | 1.112552e-52 | -8.615850e-47 |
Msa0069310 | Msa0930910 | -0.807216 | 5.633232e-50 | -8.615850e-47 |
Msa0100000 | Msa0930910 | -0.811555 | 6.602859e-51 | -8.615850e-47 |
Msa0101810 | Msa0930910 | 0.836040 | 1.181093e-56 | -8.615850e-47 |
Msa0102750 | Msa0930910 | -0.800967 | 1.124215e-48 | -8.615850e-47 |
Msa0120010 | Msa0930910 | 0.804510 | 2.087164e-49 | -8.615850e-47 |
Msa0120020 | Msa0930910 | 0.810725 | 9.992525e-51 | -8.615850e-47 |
Msa0613460 | Msa0930910 | -0.836538 | 8.825608e-57 | -8.615850e-47 |
Msa0619470 | Msa0930910 | -0.800832 | 1.197772e-48 | -8.615850e-47 |
Msa0648240 | Msa0930910 | 0.815752 | 7.871641e-52 | -8.615850e-47 |
Msa0648520 | Msa0930910 | -0.816325 | 5.862788e-52 | -8.615850e-47 |
Msa0654010 | Msa0930910 | -0.813997 | 1.927817e-51 | -8.615850e-47 |
Msa0654930 | Msa0930910 | 0.824616 | 7.330835e-54 | -8.615850e-47 |
Msa0658570 | Msa0930910 | -0.810249 | 1.266163e-50 | -8.615850e-47 |
Msa0679290 | Msa0930910 | 0.817548 | 3.115476e-52 | -8.615850e-47 |
Msa0691050 | Msa0930910 | -0.851545 | 8.275724e-61 | -8.615850e-47 |
Msa0701860 | Msa0930910 | 0.815613 | 8.451504e-52 | -8.615850e-47 |
Msa0718070 | Msa0930910 | -0.818852 | 1.579108e-52 | -8.615850e-47 |
Msa0727190 | Msa0930910 | 0.805230 | 1.475770e-49 | -8.615850e-47 |
Msa0743680 | Msa0930910 | -0.839433 | 1.589385e-57 | -8.615850e-47 |
Msa0750240 | Msa0930910 | -0.802372 | 5.789342e-49 | -8.615850e-47 |
Msa0754720 | Msa0930910 | 0.832001 | 1.212485e-55 | -8.615850e-47 |
Msa0756630 | Msa0930910 | 0.830054 | 3.644742e-55 | -8.615850e-47 |
Msa0757450 | Msa0930910 | 0.861519 | 9.692056e-64 | -8.615850e-47 |
Msa0757500 | Msa0930910 | 0.869550 | 2.845932e-66 | -8.615850e-47 |
Msa0777570 | Msa0930910 | 0.838409 | 2.925386e-57 | -8.615850e-47 |
Msa0800770 | Msa0930910 | -0.821034 | 5.003922e-53 | -8.615850e-47 |
Msa0802470 | Msa0930910 | 0.813648 | 2.301058e-51 | -8.615850e-47 |
Msa0838930 | Msa0930910 | -0.821644 | 3.618574e-53 | -8.615850e-47 |
Msa0125370 | Msa0930910 | 0.808607 | 2.850723e-50 | -8.615850e-47 |
Msa0133980 | Msa0930910 | 0.819715 | 1.004060e-52 | -8.615850e-47 |
Msa0138970 | Msa0930910 | 0.861940 | 7.207409e-64 | -8.615850e-47 |
Msa0156650 | Msa0930910 | 0.826939 | 2.059551e-54 | -8.615850e-47 |
Msa0158130 | Msa0930910 | 0.833121 | 6.397778e-56 | -8.615850e-47 |
Msa0172350 | Msa0930910 | -0.820728 | 5.885064e-53 | -8.615850e-47 |
Msa0193540 | Msa0930910 | -0.803017 | 4.260251e-49 | -8.615850e-47 |
Msa0196020 | Msa0930910 | 0.857820 | 1.257877e-62 | -8.615850e-47 |
Msa0215320 | Msa0930910 | 0.853924 | 1.731623e-61 | -8.615850e-47 |
Msa0223410 | Msa0930910 | 0.811584 | 6.507821e-51 | -8.615850e-47 |
Msa0376590 | Msa0930910 | -0.812579 | 3.948225e-51 | -8.615850e-47 |
Msa0405880 | Msa0930910 | -0.810833 | 9.467667e-51 | -8.615850e-47 |
Msa0414950 | Msa0930910 | 0.804104 | 2.535270e-49 | -8.615850e-47 |
Msa0420590 | Msa0930910 | 0.822621 | 2.148240e-53 | -8.615850e-47 |
Msa0420650 | Msa0930910 | 0.820263 | 7.523398e-53 | -8.615850e-47 |
Msa0421780 | Msa0930910 | 0.809906 | 1.500697e-50 | -8.615850e-47 |
Msa0423360 | Msa0930910 | 0.804634 | 1.965834e-49 | -8.615850e-47 |
Msa0436280 | Msa0930910 | 0.830893 | 2.272489e-55 | -8.615850e-47 |
Msa0436370 | Msa0930910 | -0.818163 | 2.261847e-52 | -8.615850e-47 |
Msa0448550 | Msa0930910 | 0.806400 | 8.378770e-50 | -8.615850e-47 |
Msa0467900 | Msa0930910 | 0.818461 | 1.937141e-52 | -8.615850e-47 |
Msa0469940 | Msa0930910 | 0.821726 | 3.463209e-53 | -8.615850e-47 |
Msa0473240 | Msa0930910 | -0.809732 | 1.636252e-50 | -8.615850e-47 |
Msa0241190 | Msa0930910 | -0.812952 | 3.272985e-51 | -8.615850e-47 |
Msa0249560 | Msa0930910 | -0.828950 | 6.761257e-55 | -8.615850e-47 |
Msa0260810 | Msa0930910 | -0.821483 | 3.941438e-53 | -8.615850e-47 |
Msa0260820 | Msa0930910 | 0.854684 | 1.044839e-61 | -8.615850e-47 |
Msa0266000 | Msa0930910 | 0.821201 | 4.578749e-53 | -8.615850e-47 |
Msa0267760 | Msa0930910 | -0.809886 | 1.515758e-50 | -8.615850e-47 |
Msa0272480 | Msa0930910 | 0.814595 | 1.421949e-51 | -8.615850e-47 |
Msa0279170 | Msa0930910 | -0.812817 | 3.502803e-51 | -8.615850e-47 |
Msa0294560 | Msa0930910 | 0.805900 | 1.067682e-49 | -8.615850e-47 |
Msa0306210 | Msa0930910 | 0.814861 | 1.241693e-51 | -8.615850e-47 |
Msa0312690 | Msa0930910 | 0.801166 | 1.023686e-48 | -8.615850e-47 |
Msa0328070 | Msa0930910 | -0.804481 | 2.115814e-49 | -8.615850e-47 |
Msa0344690 | Msa0930910 | 0.822020 | 2.961734e-53 | -8.615850e-47 |
Msa0354800 | Msa0930910 | 0.802535 | 5.358238e-49 | -8.615850e-47 |
Msa0356890 | Msa0930910 | 0.818637 | 1.766762e-52 | -8.615850e-47 |
Msa0516370 | Msa0930910 | -0.814972 | 1.173287e-51 | -8.615850e-47 |
Msa0517490 | Msa0930910 | -0.810469 | 1.135030e-50 | -8.615850e-47 |
Msa0521310 | Msa0930910 | -0.803387 | 3.571103e-49 | -8.615850e-47 |
Msa0526100 | Msa0930910 | 0.817820 | 2.704977e-52 | -8.615850e-47 |
Msa0526710 | Msa0930910 | -0.816641 | 4.981074e-52 | -8.615850e-47 |
Msa0531990 | Msa0930910 | 0.810302 | 1.233333e-50 | -8.615850e-47 |
Msa0532100 | Msa0930910 | 0.811031 | 8.578797e-51 | -8.615850e-47 |
Msa0532550 | Msa0930910 | -0.834428 | 3.014581e-56 | -8.615850e-47 |
Msa0566500 | Msa0930910 | 0.826472 | 2.662597e-54 | -8.615850e-47 |
Msa0572420 | Msa0930910 | -0.806015 | 1.010046e-49 | -8.615850e-47 |
Msa0572480 | Msa0930910 | -0.812049 | 5.155502e-51 | -8.615850e-47 |
Msa0574760 | Msa0930910 | 0.990892 | 7.684793e-185 | -8.615850e-47 |
Msa0862800 | Msa0930910 | 0.800510 | 1.393613e-48 | -8.615850e-47 |
Msa0863800 | Msa0930910 | -0.827117 | 1.867478e-54 | -8.615850e-47 |
Msa0870530 | Msa0930910 | -0.831846 | 1.324063e-55 | -8.615850e-47 |
Msa0891040 | Msa0930910 | -0.831153 | 1.961712e-55 | -8.615850e-47 |
Msa0901630 | Msa0930910 | -0.870910 | 1.020542e-66 | -8.615850e-47 |
Msa0903700 | Msa0930910 | -0.816132 | 6.475397e-52 | -8.615850e-47 |
Msa0925660 | Msa0930910 | -0.835619 | 1.510549e-56 | -8.615850e-47 |
Msa0930910 | Msa0973150 | -0.822798 | 1.953196e-53 | -8.615850e-47 |
Msa0930910 | Msa0990960 | -0.823326 | 1.471410e-53 | -8.615850e-47 |
Msa0930910 | Msa1000300 | -0.816944 | 4.258776e-52 | -8.615850e-47 |
Msa0930910 | Msa1037650 | 0.821684 | 3.543082e-53 | -8.615850e-47 |
Msa0930910 | Msa1037700 | 0.820656 | 6.112906e-53 | -8.615850e-47 |
Msa0930910 | Msa1040120 | -0.822379 | 2.445019e-53 | -8.615850e-47 |
Msa0930910 | Msa1061020 | 0.813302 | 2.742375e-51 | -8.615850e-47 |
Msa0930910 | Msa1061060 | 0.800406 | 1.462966e-48 | -8.615850e-47 |
Msa0930910 | Msa1068200 | 0.823823 | 1.125316e-53 | -8.615850e-47 |
Msa0930910 | Msa1075220 | 0.833180 | 6.184336e-56 | -8.615850e-47 |
Msa0930910 | Msa1080160 | -0.810754 | 9.849404e-51 | -8.615850e-47 |
Msa0930910 | Msa1084260 | -0.828724 | 7.668515e-55 | -8.615850e-47 |
Msa0930910 | Msa1098270 | -0.802325 | 5.919546e-49 | -8.615850e-47 |
Msa0930910 | Msa1116130 | 0.805493 | 1.299743e-49 | -8.615850e-47 |
Msa0930910 | Msa1116450 | -0.805293 | 1.431702e-49 | -8.615850e-47 |
Msa0930910 | Msa1118760 | -0.812113 | 4.991910e-51 | -8.615850e-47 |
Msa0930910 | Msa1130210 | 0.803865 | 2.842971e-49 | -8.615850e-47 |
Msa0930910 | Msa1130270 | 0.833104 | 6.458090e-56 | -8.615850e-47 |
Msa0930910 | Msa1131670 | 0.805090 | 1.578631e-49 | -8.615850e-47 |
Msa0930910 | Msa1139000 | 0.812986 | 3.216909e-51 | -8.615850e-47 |
Msa0930910 | Msa1144720 | 0.816459 | 5.469495e-52 | -8.615850e-47 |
Msa0930910 | Msa1156340 | 0.814039 | 1.887546e-51 | -8.615850e-47 |
Msa0930910 | Msa1158660 | -0.806889 | 6.607050e-50 | -8.615850e-47 |
Msa0930910 | Msa1162550 | 0.840637 | 7.711986e-58 | -8.615850e-47 |
Msa0930910 | Msa1164170 | 0.817236 | 3.660717e-52 | -8.615850e-47 |
Msa0930910 | Msa1186950 | 0.811262 | 7.646374e-51 | -8.615850e-47 |
Msa0930910 | Msa1204100 | 0.805851 | 1.093367e-49 | -8.615850e-47 |
Msa0930910 | Msa1217860 | -0.802406 | 5.695047e-49 | -8.615850e-47 |
Msa0930910 | Msa1226510 | -0.803994 | 2.671851e-49 | -8.615850e-47 |
Msa0930910 | Msa1231240 | -0.824881 | 6.346869e-54 | -8.615850e-47 |
Msa0930910 | Msa1244750 | 0.843132 | 1.690795e-58 | -8.615850e-47 |
Msa0930910 | Msa1262990 | 0.805294 | 1.431018e-49 | -8.615850e-47 |
Msa0930910 | Msa1269580 | 0.833352 | 5.601520e-56 | -8.615850e-47 |
Msa0930910 | Msa1282580 | 0.819083 | 1.399211e-52 | -8.615850e-47 |
Msa0930910 | Msa1296460 | 0.802929 | 4.442803e-49 | -8.615850e-47 |
Msa0930910 | Msa1299180 | 0.801835 | 7.466248e-49 | -8.615850e-47 |
Msa0930910 | Msa1311960 | -0.808505 | 2.996448e-50 | -8.615850e-47 |
Msa0930910 | Msa1327050 | -0.800166 | 1.637278e-48 | -8.615850e-47 |
Msa0930910 | Msa1329050 | 0.805292 | 1.432497e-49 | -8.615850e-47 |
Msa0930910 | Msa1350310 | -0.821349 | 4.232059e-53 | -8.615850e-47 |
Msa0930910 | Msa1352540 | 0.807638 | 4.583718e-50 | -8.615850e-47 |
Msa0930910 | Msa1360890 | 0.805332 | 1.404917e-49 | -8.615850e-47 |
Msa0930910 | Msa1362510 | -0.812384 | 4.356264e-51 | -8.615850e-47 |
Msa0930910 | Msa1364470 | 0.806811 | 6.862996e-50 | -8.615850e-47 |
Msa0930910 | Msa1369530 | -0.806032 | 1.001829e-49 | -8.615850e-47 |
Msa0930910 | Msa1376890 | -0.811712 | 6.102384e-51 | -8.615850e-47 |
Msa0930910 | Msa1379850 | -0.819825 | 9.478173e-53 | -8.615850e-47 |
Msa0930910 | Msa1390120 | -0.854477 | 1.199359e-61 | -8.615850e-47 |
Msa0930910 | Msa1395530 | -0.853947 | 1.705584e-61 | -8.615850e-47 |
Msa0930910 | Msa1404540 | -0.818846 | 1.583846e-52 | -8.615850e-47 |
Msa0930910 | Msa1429360 | 0.829669 | 4.524343e-55 | -8.615850e-47 |
Msa0930910 | Msa1431060 | -0.816415 | 5.595184e-52 | -8.615850e-47 |
Msa0930910 | Msa1439960 | -0.800041 | 1.735789e-48 | -8.615850e-47 |
Msa0930910 | Msa1447110 | -0.838943 | 2.129923e-57 | -8.615850e-47 |
Msa0930910 | Msa1449910 | -0.802892 | 4.521280e-49 | -8.615850e-47 |
Msa0930910 | Msa1451620 | 0.840252 | 9.726559e-58 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0930910 | MtrunA17_Chr8g0391521 | 100.000 | 159 | 0 | 0 | 1 | 159 | 1 | 159 | 1.18e-117 | 328 |
Msa0930910 | MtrunA17_Chr1g0177971 | 80.142 | 141 | 28 | 0 | 1 | 141 | 3 | 143 | 4.38e-84 | 243 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0930910 | AT1G70660.1 | 76.730 | 159 | 37 | 0 | 1 | 159 | 1 | 159 | 1.85e-92 | 265 |
Msa0930910 | AT1G23260.1 | 75.472 | 159 | 38 | 1 | 1 | 159 | 1 | 158 | 3.06e-91 | 262 |
Msa0930910 | AT1G70650.2 | 76.316 | 152 | 36 | 0 | 8 | 159 | 444 | 595 | 3.00e-84 | 259 |
Msa0930910 | AT1G70660.2 | 78.472 | 144 | 31 | 0 | 1 | 144 | 1 | 144 | 4.70e-84 | 244 |
Msa0930910 | AT3G52560.1 | 77.305 | 141 | 32 | 0 | 1 | 141 | 3 | 143 | 3.65e-81 | 236 |
Msa0930910 | AT3G52560.2 | 76.224 | 143 | 33 | 1 | 1 | 142 | 3 | 145 | 2.43e-79 | 232 |
Msa0930910 | AT2G36060.1 | 77.372 | 137 | 31 | 0 | 5 | 141 | 6 | 142 | 1.04e-78 | 230 |
Msa0930910 | AT2G36060.2 | 76.812 | 138 | 31 | 1 | 5 | 141 | 6 | 143 | 7.10e-77 | 226 |
Msa0930910 | AT3G52560.4 | 68.125 | 160 | 33 | 1 | 1 | 142 | 3 | 162 | 1.26e-76 | 226 |
Msa0930910 | AT2G36060.3 | 76.642 | 137 | 31 | 1 | 5 | 141 | 6 | 141 | 3.29e-76 | 224 |
Msa0930910 | AT1G23260.2 | 71.774 | 124 | 34 | 1 | 36 | 159 | 1 | 123 | 7.69e-68 | 202 |
Msa0930910 | AT3G52560.3 | 71.963 | 107 | 29 | 1 | 36 | 141 | 1 | 107 | 5.04e-55 | 169 |
Find 77 sgRNAs with CRISPR-Local
Find 482 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTAGGAATTTCAGATTAT+TGG | 0.156726 | 6_2:+80027832 | Msa0930910:CDS |
CTTCCGATTCATCATCAAAA+TGG | 0.205164 | 6_2:+80024415 | Msa0930910:exon |
GCAAGCATGGGAAACAAATT+TGG | 0.244783 | 6_2:-80028797 | None:intergenic |
CTTTACTGCGGACTCTAATT+TGG | 0.258224 | 6_2:+80030239 | Msa0930910:three_prime_UTR |
GAAAATTATGAAAACGAAAT+AGG | 0.277634 | 6_2:-80030377 | None:intergenic |
TCATGGACTGGGACTATTAT+TGG | 0.312389 | 6_2:+80027938 | Msa0930910:CDS |
ATACATTCATCCTGAAATTA+TGG | 0.325529 | 6_2:+80030324 | Msa0930910:three_prime_UTR |
AATCGGAAGAGCTAGGGTTT+TGG | 0.328866 | 6_2:-80024401 | None:intergenic |
ATGGATACATCCATAATTTC+AGG | 0.351473 | 6_2:-80030334 | None:intergenic |
TAACTACCACTCCAGATTCT+TGG | 0.355892 | 6_2:-80028683 | None:intergenic |
ATCTCAGCACCAGCCCCTTT+TGG | 0.363252 | 6_2:-80030021 | None:intergenic |
CTAACAGATGGTGGATTGTC+TGG | 0.370636 | 6_2:-80028627 | None:intergenic |
ATTATATTGAATAGATAATC+CGG | 0.384525 | 6_2:+80030092 | Msa0930910:three_prime_UTR |
ACTTGCGTCAACCAAGAATC+TGG | 0.394238 | 6_2:+80028672 | Msa0930910:CDS |
GAATAGATAATCCGGGTTCA+TGG | 0.396088 | 6_2:+80030100 | Msa0930910:three_prime_UTR |
GAGCGAGGTGAGAAGGGAAT+TGG | 0.414625 | 6_2:+80027863 | Msa0930910:CDS |
ACAATTCACGTTAAAATTCA+AGG | 0.419494 | 6_2:-80030197 | None:intergenic |
CAGGAGGCTGAGATAGCTTC+CGG | 0.421676 | 6_2:-80028892 | None:intergenic |
TGCCACAAAACAACTTCAAC+TGG | 0.424473 | 6_2:-80028596 | None:intergenic |
GATGTTGTATCGTGTAATTC+AGG | 0.426522 | 6_2:+80030041 | Msa0930910:exon |
TGACCATTGCGTTTGTAACC+TGG | 0.444410 | 6_2:+80030149 | Msa0930910:three_prime_UTR |
AATAGTAGAGAGAGAAAAGC+AGG | 0.450884 | 6_2:-80024378 | None:intergenic |
TTCCGATTCATCATCAAAAT+GGG | 0.456771 | 6_2:+80024416 | Msa0930910:exon |
AGTCACTCTTTGATTTCTCC+AGG | 0.458828 | 6_2:-80030167 | None:intergenic |
ATATTCATGCAGTCATGGAC+TGG | 0.466117 | 6_2:+80027926 | Msa0930910:CDS |
TCCAATAATCTGAAATTCCT+AGG | 0.468152 | 6_2:-80027833 | None:intergenic |
TGTTTCCCATGCTTGCTAGT+TGG | 0.469816 | 6_2:+80028804 | Msa0930910:CDS |
AAATTATGGATGTATCCATT+TGG | 0.473820 | 6_2:+80030338 | Msa0930910:three_prime_UTR |
AAATGATGTCCCCACAAAAC+CGG | 0.476684 | 6_2:+80028873 | Msa0930910:CDS |
TAAATTATTCAACAACCAAA+TGG | 0.478848 | 6_2:-80030353 | None:intergenic |
TCACGTTAAAATTCAAGGAT+AGG | 0.481795 | 6_2:-80030192 | None:intergenic |
AGAGCTTGAGCGAGGTGAGA+AGG | 0.483020 | 6_2:+80027856 | Msa0930910:CDS |
AGATGGAAGGATTGACCAAA+AGG | 0.483239 | 6_2:+80030006 | Msa0930910:CDS |
GATGATGAATCGGAAGAGCT+AGG | 0.488456 | 6_2:-80024408 | None:intergenic |
AATAGATAATCCGGGTTCAT+GGG | 0.497024 | 6_2:+80030101 | Msa0930910:three_prime_UTR |
GAGAGAGAAAAGCAGGTAGG+TGG | 0.498593 | 6_2:-80024371 | None:intergenic |
GAGCTTGAGCGAGGTGAGAA+GGG | 0.501264 | 6_2:+80027857 | Msa0930910:CDS |
TGTCTATCAATGCAGTTCCT+AGG | 0.505496 | 6_2:+80027816 | Msa0930910:intron |
GAAAGAGATAAAGACGAAGA+AGG | 0.512525 | 6_2:-80024343 | None:intergenic |
GATGGAAGGATTGACCAAAA+GGG | 0.513888 | 6_2:+80030007 | Msa0930910:CDS |
TGCGGACTCTAATTTGGCAG+TGG | 0.513983 | 6_2:+80030245 | Msa0930910:three_prime_UTR |
GGAGACGGAACTGTTAGCTA+TGG | 0.518406 | 6_2:+80027884 | Msa0930910:CDS |
TGACTTTCAGGCAATGAAGA+TGG | 0.525323 | 6_2:+80029989 | Msa0930910:intron |
ATCATCAAAATGGGTTCTGA+AGG | 0.533662 | 6_2:+80024425 | Msa0930910:exon |
ATGATGAATCGGAAGAGCTA+GGG | 0.534938 | 6_2:-80024407 | None:intergenic |
ATGATATATTCATGCAGTCA+TGG | 0.540165 | 6_2:+80027921 | Msa0930910:CDS |
TATTCATGCAGTCATGGACT+GGG | 0.545769 | 6_2:+80027927 | Msa0930910:CDS |
TAAAGACGAAGAAGGTGTGA+GGG | 0.553850 | 6_2:-80024335 | None:intergenic |
AAGGATTGACCAAAAGGGGC+TGG | 0.566071 | 6_2:+80030012 | Msa0930910:CDS |
TTATATCAGACTGTTCATGA+AGG | 0.568360 | 6_2:+80028564 | Msa0930910:intron |
CATCTGTTAGATTTCAGACA+AGG | 0.568599 | 6_2:+80028640 | Msa0930910:CDS |
TTATATTGAATAGATAATCC+GGG | 0.575627 | 6_2:+80030093 | Msa0930910:three_prime_UTR |
CTTGTCTGAAATCTAACAGA+TGG | 0.576929 | 6_2:-80028639 | None:intergenic |
CGGAACTGTTAGCTATGGGA+TGG | 0.580756 | 6_2:+80027889 | Msa0930910:CDS |
TTTCAGGCAATGAAGATGGA+AGG | 0.586005 | 6_2:+80029993 | Msa0930910:intron |
GCGGACTCTAATTTGGCAGT+GGG | 0.589226 | 6_2:+80030246 | Msa0930910:three_prime_UTR |
GAGACGGAACTGTTAGCTAT+GGG | 0.590695 | 6_2:+80027885 | Msa0930910:CDS |
AAGCTATCTCAGCCTCCTGA+AGG | 0.591688 | 6_2:+80028896 | Msa0930910:CDS |
GTAGAGAGAGAAAAGCAGGT+AGG | 0.593831 | 6_2:-80024374 | None:intergenic |
ATAAAGACGAAGAAGGTGTG+AGG | 0.599556 | 6_2:-80024336 | None:intergenic |
ATGGAAGGATTGACCAAAAG+GGG | 0.614785 | 6_2:+80030008 | Msa0930910:CDS |
GTCTGAAATCTAACAGATGG+TGG | 0.615185 | 6_2:-80028636 | None:intergenic |
TCTGAAGGATCCACCGTCGT+TGG | 0.619901 | 6_2:+80024440 | Msa0930910:CDS |
GGTGAGAAGGGAATTGGAGA+CGG | 0.623567 | 6_2:+80027869 | Msa0930910:CDS |
TCTCCAGGTTACAAACGCAA+TGG | 0.628468 | 6_2:-80030152 | None:intergenic |
AATGCATTAACCCATGAACC+CGG | 0.634518 | 6_2:-80030111 | None:intergenic |
ATGATTGTAATAATGAAGTG+TGG | 0.651262 | 6_2:-80024311 | None:intergenic |
CTTGAAACTGCTCTTTACTG+CGG | 0.653085 | 6_2:+80030227 | Msa0930910:three_prime_UTR |
TTGGAAAAGAGAGTCTACAA+TGG | 0.665507 | 6_2:+80028823 | Msa0930910:CDS |
TTATTGGAAGAGCTTGAGCG+AGG | 0.667755 | 6_2:+80027848 | Msa0930910:CDS |
CGTCAACCAAGAATCTGGAG+TGG | 0.681244 | 6_2:+80028677 | Msa0930910:CDS |
AAGAATAGAACTTACACCCG+GGG | 0.681780 | 6_2:-80027963 | None:intergenic |
AAGAATGACACACCTTCAGG+AGG | 0.686018 | 6_2:-80028908 | None:intergenic |
TGGAGAATTACCAACGACGG+TGG | 0.699097 | 6_2:-80024450 | None:intergenic |
TGTTGGAGAATTACCAACGA+CGG | 0.741066 | 6_2:-80024453 | None:intergenic |
AGAATAGAACTTACACCCGG+GGG | 0.747089 | 6_2:-80027962 | None:intergenic |
GAATAGAACTTACACCCGGG+GGG | 0.773466 | 6_2:-80027961 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTATGTTAAACAAAAAAA+TGG | - | chr6_2:80025041-80025060 | None:intergenic | 10.0% |
!! | TAAATAGAATTTAATATTTC+AGG | - | chr6_2:80028379-80028398 | None:intergenic | 10.0% |
!! | AATAAATAGTAATAGTTATA+AGG | - | chr6_2:80029585-80029604 | None:intergenic | 10.0% |
!!! | TTTTGTTTAACATAAATAGA+TGG | + | chr6_2:80025044-80025063 | Msa0930910:intron | 15.0% |
!! | AAAACTAAAGTAAAAAGATA+AGG | - | chr6_2:80025802-80025821 | None:intergenic | 15.0% |
!!! | TTATCTTTTTACTTTAGTTT+TGG | + | chr6_2:80025801-80025820 | Msa0930910:intron | 15.0% |
!!! | CAATATTTCAAAAAGTTTTT+CGG | - | chr6_2:80028012-80028031 | None:intergenic | 15.0% |
!! | ATTATATTGAATAGATAATC+CGG | + | chr6_2:80030092-80030111 | Msa0930910:three_prime_UTR | 15.0% |
!! | AAAAAGTAGAAAGAGATAAT+AGG | - | chr6_2:80024500-80024519 | None:intergenic | 20.0% |
!!! | GTTTTTTTGAAATTGATCAA+GGG | + | chr6_2:80024640-80024659 | Msa0930910:intron | 20.0% |
!! | TATGTTAAACAAAAAAATGG+CGG | - | chr6_2:80025038-80025057 | None:intergenic | 20.0% |
!!! | TATGGGTACTTTAAAATTTA+TGG | + | chr6_2:80026742-80026761 | Msa0930910:intron | 20.0% |
!!! | TTTTGAAGTGAATTTTCATA+TGG | + | chr6_2:80028301-80028320 | Msa0930910:intron | 20.0% |
!! | AATATTGATAAGAAAACTTC+AGG | - | chr6_2:80028424-80028443 | None:intergenic | 20.0% |
!!! | AAATTAAACATCATTTTGAC+TGG | + | chr6_2:80028518-80028537 | Msa0930910:intron | 20.0% |
!! | TGTAAGTAAGTAAGTAAAAA+TGG | - | chr6_2:80028709-80028728 | None:intergenic | 20.0% |
!! | ACACTGATAAATATCTAAAT+TGG | + | chr6_2:80028765-80028784 | Msa0930910:intron | 20.0% |
!! | TTCTTTCAATATTAAATCCT+GGG | - | chr6_2:80029495-80029514 | None:intergenic | 20.0% |
!! | ATTCTTTCAATATTAAATCC+TGG | - | chr6_2:80029496-80029515 | None:intergenic | 20.0% |
!!! | TAACAAAGTTTATTTCTCTA+GGG | - | chr6_2:80029753-80029772 | None:intergenic | 20.0% |
!!! | TTAACAAAGTTTATTTCTCT+AGG | - | chr6_2:80029754-80029773 | None:intergenic | 20.0% |
!! | TTATATTGAATAGATAATCC+GGG | + | chr6_2:80030093-80030112 | Msa0930910:three_prime_UTR | 20.0% |
!! | CATAAAAAAGCAAAGATAAA+AGG | - | chr6_2:80030274-80030293 | None:intergenic | 20.0% |
!! | TAAATTATTCAACAACCAAA+TGG | - | chr6_2:80030356-80030375 | None:intergenic | 20.0% |
! | ATGATTGTAATAATGAAGTG+TGG | - | chr6_2:80024314-80024333 | None:intergenic | 25.0% |
! | GAAGAAAAAAAGCAGAAAAT+TGG | - | chr6_2:80024524-80024543 | None:intergenic | 25.0% |
!!! | TTTTCTGCTTTTTTTCTTCT+TGG | + | chr6_2:80024525-80024544 | Msa0930910:intron | 25.0% |
!!! | TTTTTTCATCTCATCTGTTT+TGG | + | chr6_2:80024585-80024604 | Msa0930910:intron | 25.0% |
!!! | CGTTTTTTTGAAATTGATCA+AGG | + | chr6_2:80024639-80024658 | Msa0930910:intron | 25.0% |
! | AATGAATTTGCATCAATATC+AGG | - | chr6_2:80024676-80024695 | None:intergenic | 25.0% |
! | ATTTCTGTAATAAACGTAAC+AGG | + | chr6_2:80024739-80024758 | Msa0930910:intron | 25.0% |
! | TTTCTGTAATAAACGTAACA+GGG | + | chr6_2:80024740-80024759 | Msa0930910:intron | 25.0% |
! | TTATTTATGCTCACTGTAAT+TGG | + | chr6_2:80024824-80024843 | Msa0930910:intron | 25.0% |
! | ATGTTAAACAAAAAAATGGC+GGG | - | chr6_2:80025037-80025056 | None:intergenic | 25.0% |
! | TTCCACAACTTATTTAATGA+AGG | + | chr6_2:80025076-80025095 | Msa0930910:intron | 25.0% |
! | ATCCTTCATTAAATAAGTTG+TGG | - | chr6_2:80025081-80025100 | None:intergenic | 25.0% |
! | GACGATAATAGTTATAGTTT+CGG | - | chr6_2:80025150-80025169 | None:intergenic | 25.0% |
! | GAAACTATAACTATTATCGT+CGG | + | chr6_2:80025149-80025168 | Msa0930910:intron | 25.0% |
! | GTTCTTATAGATTGGAATTA+AGG | - | chr6_2:80025356-80025375 | None:intergenic | 25.0% |
! | AATTCCAATCTATAAGAACA+AGG | + | chr6_2:80025357-80025376 | Msa0930910:intron | 25.0% |
! | ATTCCAATCTATAAGAACAA+GGG | + | chr6_2:80025358-80025377 | Msa0930910:intron | 25.0% |
! | AGTAAAAAGATAAGGACTTA+GGG | - | chr6_2:80025794-80025813 | None:intergenic | 25.0% |
! | AAGTAAAAAGATAAGGACTT+AGG | - | chr6_2:80025795-80025814 | None:intergenic | 25.0% |
!! | GTTTCTCTAATAGTTTTCTT+AGG | - | chr6_2:80026528-80026547 | None:intergenic | 25.0% |
! | AACCATTAGAAAAGATTTAG+AGG | + | chr6_2:80026545-80026564 | Msa0930910:intron | 25.0% |
!! | GTGACAAATTTTTATTGATC+AGG | + | chr6_2:80027085-80027104 | Msa0930910:intron | 25.0% |
!! | TCTCAAATTTTATTGCTTCA+GGG | + | chr6_2:80027209-80027228 | Msa0930910:intron | 25.0% |
! | GATGAAGTTTATAATTACTC+AGG | - | chr6_2:80027277-80027296 | None:intergenic | 25.0% |
! | ATAAACTTCATCAAAATGAG+TGG | + | chr6_2:80027285-80027304 | Msa0930910:intron | 25.0% |
! | AAGATATTATTCTCAAGCAA+AGG | - | chr6_2:80027389-80027408 | None:intergenic | 25.0% |
!!! | ACTAACTTGCTTAAAAAACA+AGG | + | chr6_2:80027486-80027505 | Msa0930910:intron | 25.0% |
! | GTGCTGAAATAGTTAATATT+TGG | + | chr6_2:80027577-80027596 | Msa0930910:intron | 25.0% |
! | ATTTGGATCAGATCATAATA+AGG | + | chr6_2:80027594-80027613 | Msa0930910:intron | 25.0% |
! | TTTGGATCAGATCATAATAA+GGG | + | chr6_2:80027595-80027614 | Msa0930910:intron | 25.0% |
! | GAATATAGTAAATTCGTGTA+AGG | - | chr6_2:80027646-80027665 | None:intergenic | 25.0% |
!!! | TTTGTATTTTGATCAGAATG+AGG | + | chr6_2:80028178-80028197 | Msa0930910:intron | 25.0% |
!!! | TTGTATTTTGATCAGAATGA+GGG | + | chr6_2:80028179-80028198 | Msa0930910:intron | 25.0% |
! | AGAAAACTTCAGGAAAATAA+GGG | - | chr6_2:80028414-80028433 | None:intergenic | 25.0% |
! | AAGAAAACTTCAGGAAAATA+AGG | - | chr6_2:80028415-80028434 | None:intergenic | 25.0% |
! | TGATAAATATCTAAATTGGC+AGG | + | chr6_2:80028769-80028788 | Msa0930910:intron | 25.0% |
! | TATGGAAATACATAGTTTGA+TGG | - | chr6_2:80029668-80029687 | None:intergenic | 25.0% |
! | ATGTATTTCCATATCATGAA+AGG | + | chr6_2:80029675-80029694 | Msa0930910:intron | 25.0% |
!! | AACAAAGTTTATTTCTCTAG+GGG | - | chr6_2:80029752-80029771 | None:intergenic | 25.0% |
! | ACAATTCACGTTAAAATTCA+AGG | - | chr6_2:80030200-80030219 | None:intergenic | 25.0% |
! | ATACATTCATCCTGAAATTA+TGG | + | chr6_2:80030324-80030343 | Msa0930910:three_prime_UTR | 25.0% |
! | AAATTATGGATGTATCCATT+TGG | + | chr6_2:80030338-80030357 | Msa0930910:three_prime_UTR | 25.0% |
TTCCGATTCATCATCAAAAT+GGG | + | chr6_2:80024416-80024435 | Msa0930910:exon | 30.0% | |
!!! | AACCCATTTTGATGATGAAT+CGG | - | chr6_2:80024421-80024440 | None:intergenic | 30.0% |
GGAAATGAAAATAGAAGTGA+AGG | - | chr6_2:80024479-80024498 | None:intergenic | 30.0% | |
TAACCTACTGTAGAAACTTT+AGG | + | chr6_2:80024925-80024944 | Msa0930910:intron | 30.0% | |
TGTTAAACAAAAAAATGGCG+GGG | - | chr6_2:80025036-80025055 | None:intergenic | 30.0% | |
! | AACTTTTCAACGAGATTATG+AGG | + | chr6_2:80025296-80025315 | Msa0930910:intron | 30.0% |
TTCCAATCTATAAGAACAAG+GGG | + | chr6_2:80025359-80025378 | Msa0930910:intron | 30.0% | |
!! | GCACTTAGTTTTCATTGATT+TGG | + | chr6_2:80025588-80025607 | Msa0930910:intron | 30.0% |
!!! | AGTTTTCATTGATTTGGAGA+AGG | + | chr6_2:80025594-80025613 | Msa0930910:intron | 30.0% |
TATTGTTATGGGAAAATCTC+CGG | - | chr6_2:80025752-80025771 | None:intergenic | 30.0% | |
TAGAAACAAGACGGAATATA+TGG | + | chr6_2:80025972-80025991 | Msa0930910:intron | 30.0% | |
TGGAATGTAACTTCAGTAAA+AGG | + | chr6_2:80025992-80026011 | Msa0930910:intron | 30.0% | |
ATATCTAAACCGTGTAACTT+GGG | - | chr6_2:80026064-80026083 | None:intergenic | 30.0% | |
TTACACGGTTTAGATATCTT+GGG | + | chr6_2:80026067-80026086 | Msa0930910:intron | 30.0% | |
! | TCTACCAACTTTTCTACTAT+AGG | - | chr6_2:80026399-80026418 | None:intergenic | 30.0% |
! | GACCTCTAAATCTTTTCTAA+TGG | - | chr6_2:80026550-80026569 | None:intergenic | 30.0% |
GTTCTATCAAAGACCATATT+TGG | - | chr6_2:80026585-80026604 | None:intergenic | 30.0% | |
TGGTCTTTGATAGAACATTA+TGG | + | chr6_2:80026589-80026608 | Msa0930910:intron | 30.0% | |
TCTTTGATAGAACATTATGG+CGG | + | chr6_2:80026592-80026611 | Msa0930910:intron | 30.0% | |
!! | TTATTAGGACCTTTGAAGTA+TGG | + | chr6_2:80026724-80026743 | Msa0930910:intron | 30.0% |
!! | TATTAGGACCTTTGAAGTAT+GGG | + | chr6_2:80026725-80026744 | Msa0930910:intron | 30.0% |
! | TTAAAGTACCCATACTTCAA+AGG | - | chr6_2:80026736-80026755 | None:intergenic | 30.0% |
CTTAACATGTTGAAGAACAA+GGG | - | chr6_2:80026947-80026966 | None:intergenic | 30.0% | |
TCTTAACATGTTGAAGAACA+AGG | - | chr6_2:80026948-80026967 | None:intergenic | 30.0% | |
CCTAAACAGTTAAAAACCAA+GGG | - | chr6_2:80026979-80026998 | None:intergenic | 30.0% | |
!! | CCTTGGTTTTTAACTGTTTA+GGG | + | chr6_2:80026977-80026996 | Msa0930910:intron | 30.0% |
! | AATTTTTATTGATCAGGAGC+AGG | + | chr6_2:80027091-80027110 | Msa0930910:intron | 30.0% |
! | GAAATATGTTGTAACTTGCA+TGG | + | chr6_2:80027145-80027164 | Msa0930910:intron | 30.0% |
! | GTCTCAAATTTTATTGCTTC+AGG | + | chr6_2:80027208-80027227 | Msa0930910:intron | 30.0% |
! | CTCAAATTTTATTGCTTCAG+GGG | + | chr6_2:80027210-80027229 | Msa0930910:intron | 30.0% |
AAGCAAAGGATACTAAAAAG+AGG | - | chr6_2:80027375-80027394 | None:intergenic | 30.0% | |
CTTAAAAAACAAGGCTAGAT+TGG | + | chr6_2:80027495-80027514 | Msa0930910:intron | 30.0% | |
ACAAATTGCAAATCTACAAG+TGG | - | chr6_2:80027767-80027786 | None:intergenic | 30.0% | |
TCCTAGGAATTTCAGATTAT+TGG | + | chr6_2:80027832-80027851 | Msa0930910:CDS | 30.0% | |
! | TCCAATAATCTGAAATTCCT+AGG | - | chr6_2:80027836-80027855 | None:intergenic | 30.0% |
ATGATATATTCATGCAGTCA+TGG | + | chr6_2:80027921-80027940 | Msa0930910:CDS | 30.0% | |
!!! | TCTCTATTTTTGCCCTATTT+TGG | + | chr6_2:80028080-80028099 | Msa0930910:intron | 30.0% |
GTGAATTGTTGACCAAAATA+GGG | - | chr6_2:80028095-80028114 | None:intergenic | 30.0% | |
TGTGAATTGTTGACCAAAAT+AGG | - | chr6_2:80028096-80028115 | None:intergenic | 30.0% | |
!!! | TGTATTTTGATCAGAATGAG+GGG | + | chr6_2:80028180-80028199 | Msa0930910:intron | 30.0% |
! | TTGGGTTTAATGTTTTGCTT+TGG | + | chr6_2:80028218-80028237 | Msa0930910:intron | 30.0% |
!!! | CTTTTTAGCTTCTTCAAAAG+TGG | + | chr6_2:80028273-80028292 | Msa0930910:intron | 30.0% |
!! | TTCTGTTCATGGCTTTAATT+GGG | - | chr6_2:80028454-80028473 | None:intergenic | 30.0% |
!! | ATTCTGTTCATGGCTTTAAT+TGG | - | chr6_2:80028455-80028474 | None:intergenic | 30.0% |
TTATATCAGACTGTTCATGA+AGG | + | chr6_2:80028564-80028583 | Msa0930910:intron | 30.0% | |
!!! | CATAAGTTCTGTGTTTTTTC+TGG | + | chr6_2:80028998-80029017 | Msa0930910:intron | 30.0% |
TTCTTCTTATAGTGACTGTA+TGG | + | chr6_2:80029032-80029051 | Msa0930910:intron | 30.0% | |
! | CTTGGTTGTTGTTGTATATT+AGG | + | chr6_2:80029153-80029172 | Msa0930910:intron | 30.0% |
TTGAGAGTGAAACTTTATGA+TGG | + | chr6_2:80029397-80029416 | Msa0930910:intron | 30.0% | |
AGTGCATTTGTTTCAATACA+TGG | + | chr6_2:80029444-80029463 | Msa0930910:intron | 30.0% | |
TGGTGTGAAGATAATTTCTT+TGG | - | chr6_2:80029645-80029664 | None:intergenic | 30.0% | |
TGGTAATTCCTTTCATGATA+TGG | - | chr6_2:80029686-80029705 | None:intergenic | 30.0% | |
ACTACCATTCAATGATATGT+TGG | - | chr6_2:80029794-80029813 | None:intergenic | 30.0% | |
CTGACTAAGTTATAAGCTTA+TGG | + | chr6_2:80029868-80029887 | Msa0930910:intron | 30.0% | |
TTATGGTGACATAACTTTGT+TGG | + | chr6_2:80029885-80029904 | Msa0930910:intron | 30.0% | |
TCACGTTAAAATTCAAGGAT+AGG | - | chr6_2:80030195-80030214 | None:intergenic | 30.0% | |
ATGGATACATCCATAATTTC+AGG | - | chr6_2:80030337-80030356 | None:intergenic | 30.0% | |
GAAAGAGATAAAGACGAAGA+AGG | - | chr6_2:80024346-80024365 | None:intergenic | 35.0% | |
AATAGTAGAGAGAGAAAAGC+AGG | - | chr6_2:80024381-80024400 | None:intergenic | 35.0% | |
CTTCCGATTCATCATCAAAA+TGG | + | chr6_2:80024415-80024434 | Msa0930910:exon | 35.0% | |
! | ATCATCAAAATGGGTTCTGA+AGG | + | chr6_2:80024425-80024444 | Msa0930910:exon | 35.0% |
! | GAAAATAGAAGTGAAGGTGT+TGG | - | chr6_2:80024473-80024492 | None:intergenic | 35.0% |
!!! | TCTGCTTTTTTTCTTCTTGG+TGG | + | chr6_2:80024528-80024547 | Msa0930910:intron | 35.0% |
TAACTATTATCGTCGGATTC+AGG | + | chr6_2:80025156-80025175 | Msa0930910:intron | 35.0% | |
TCCAATCTATAAGAACAAGG+GGG | + | chr6_2:80025360-80025379 | Msa0930910:intron | 35.0% | |
TACAAGATTGCGCGAATTAT+AGG | + | chr6_2:80025386-80025405 | Msa0930910:intron | 35.0% | |
ACAAGATTGCGCGAATTATA+GGG | + | chr6_2:80025387-80025406 | Msa0930910:intron | 35.0% | |
TGAGTCATACCATGAAGTTA+TGG | + | chr6_2:80025422-80025441 | Msa0930910:intron | 35.0% | |
GAGTCATACCATGAAGTTAT+GGG | + | chr6_2:80025423-80025442 | Msa0930910:intron | 35.0% | |
ATACCATGAAGTTATGGGAA+AGG | + | chr6_2:80025428-80025447 | Msa0930910:intron | 35.0% | |
TACCATGAAGTTATGGGAAA+GGG | + | chr6_2:80025429-80025448 | Msa0930910:intron | 35.0% | |
AAGAAAAGAGACTCACGTTA+CGG | + | chr6_2:80025468-80025487 | Msa0930910:intron | 35.0% | |
!!! | AACCAATTTGGTTTTATGCC+TGG | + | chr6_2:80025493-80025512 | Msa0930910:intron | 35.0% |
!!! | ACCAATTTGGTTTTATGCCT+GGG | + | chr6_2:80025494-80025513 | Msa0930910:intron | 35.0% |
!! | ATCCTGGATAGCTCTAATAT+AGG | - | chr6_2:80025683-80025702 | None:intergenic | 35.0% |
! | GGAGATTTTCCCATAACAAT+AGG | + | chr6_2:80025751-80025770 | Msa0930910:intron | 35.0% |
AACTTCAGTAAAAGGAGAAG+TGG | + | chr6_2:80026000-80026019 | Msa0930910:intron | 35.0% | |
ACTTCAGTAAAAGGAGAAGT+GGG | + | chr6_2:80026001-80026020 | Msa0930910:intron | 35.0% | |
ATATCATACCCCAAGTTACA+CGG | + | chr6_2:80026052-80026071 | Msa0930910:intron | 35.0% | |
TATCTAAACCGTGTAACTTG+GGG | - | chr6_2:80026063-80026082 | None:intergenic | 35.0% | |
GATATCTAAACCGTGTAACT+TGG | - | chr6_2:80026065-80026084 | None:intergenic | 35.0% | |
GTTACACGGTTTAGATATCT+TGG | + | chr6_2:80026066-80026085 | Msa0930910:intron | 35.0% | |
!! | TTCTCCGTCATTTTGTACTA+TGG | - | chr6_2:80026094-80026113 | None:intergenic | 35.0% |
TACATCATCGTATTCAAGCT+GGG | + | chr6_2:80026127-80026146 | Msa0930910:intron | 35.0% | |
! | AAAGTACCACTTAAGCTGAA+AGG | + | chr6_2:80026192-80026211 | Msa0930910:intron | 35.0% |
AACTTTCCTTTCAGCTTAAG+TGG | - | chr6_2:80026201-80026220 | None:intergenic | 35.0% | |
AGCTGAAAGGAAAGTTCTAT+CGG | + | chr6_2:80026205-80026224 | Msa0930910:intron | 35.0% | |
AGACTAGACATGATAGGATT+AGG | + | chr6_2:80026340-80026359 | Msa0930910:intron | 35.0% | |
AGCACCTATAGTAGAAAAGT+TGG | + | chr6_2:80026392-80026411 | Msa0930910:intron | 35.0% | |
TGGTAGAAAATACGCTTAGA+TGG | + | chr6_2:80026412-80026431 | Msa0930910:intron | 35.0% | |
GAAAATACGCTTAGATGGTT+TGG | + | chr6_2:80026417-80026436 | Msa0930910:intron | 35.0% | |
TTGATCTACTCTTCTTACCA+CGG | - | chr6_2:80026469-80026488 | None:intergenic | 35.0% | |
GGTAAGAAGAGTAGATCAAA+TGG | + | chr6_2:80026470-80026489 | Msa0930910:intron | 35.0% | |
AAGAAGAGTAGATCAAATGG+AGG | + | chr6_2:80026473-80026492 | Msa0930910:intron | 35.0% | |
AGATTTAGAGGTCAATGAGT+TGG | + | chr6_2:80026557-80026576 | Msa0930910:intron | 35.0% | |
! | CAATGAGTTGGATCCAAATA+TGG | + | chr6_2:80026569-80026588 | Msa0930910:intron | 35.0% |
TACAAGCTCATCCATTTATC+TGG | + | chr6_2:80026694-80026713 | Msa0930910:intron | 35.0% | |
ACAAGCTCATCCATTTATCT+GGG | + | chr6_2:80026695-80026714 | Msa0930910:intron | 35.0% | |
CTTTAGTCAATCAACAATCG+CGG | + | chr6_2:80026773-80026792 | Msa0930910:intron | 35.0% | |
TGTTAAGACAAAAATGCCCT+TGG | + | chr6_2:80026960-80026979 | Msa0930910:intron | 35.0% | |
!! | CCCTTGGTTTTTAACTGTTT+AGG | + | chr6_2:80026976-80026995 | Msa0930910:intron | 35.0% |
CCCTAAACAGTTAAAAACCA+AGG | - | chr6_2:80026980-80026999 | None:intergenic | 35.0% | |
!!! | TTGTTGGAAGCGTTTTCTTT+TGG | + | chr6_2:80027237-80027256 | Msa0930910:intron | 35.0% |
! | GTTTTCTTTTGGATCCTCAT+TGG | + | chr6_2:80027248-80027267 | Msa0930910:intron | 35.0% |
AATTACTCAGGTTACCAATG+AGG | - | chr6_2:80027265-80027284 | None:intergenic | 35.0% | |
TAGTTCCTGAGAGTTCTTTA+TGG | + | chr6_2:80027340-80027359 | Msa0930910:intron | 35.0% | |
AGTTCCTGAGAGTTCTTTAT+GGG | + | chr6_2:80027341-80027360 | Msa0930910:intron | 35.0% | |
GTGATCTAAATCATGAAAGC+TGG | + | chr6_2:80027460-80027479 | Msa0930910:intron | 35.0% | |
AGAAGTTATTGGTCCAATTC+AGG | - | chr6_2:80027531-80027550 | None:intergenic | 35.0% | |
TGAATTGGACCAATAACTTC+TGG | + | chr6_2:80027530-80027549 | Msa0930910:intron | 35.0% | |
AACAGGATTCCAGAAGTTAT+TGG | - | chr6_2:80027542-80027561 | None:intergenic | 35.0% | |
!! | AATAACTTCTGGAATCCTGT+TGG | + | chr6_2:80027541-80027560 | Msa0930910:intron | 35.0% |
!! | ATAACTTCTGGAATCCTGTT+GGG | + | chr6_2:80027542-80027561 | Msa0930910:intron | 35.0% |
AAAGAATAGAACTTACACCC+GGG | - | chr6_2:80027967-80027986 | None:intergenic | 35.0% | |
CAAAGAATAGAACTTACACC+CGG | - | chr6_2:80027968-80027987 | None:intergenic | 35.0% | |
! | ATATCCAGCATAAGTTGACA+AGG | - | chr6_2:80028123-80028142 | None:intergenic | 35.0% |
!!! | GTTTTGCTTTGGAAACTAAG+TGG | + | chr6_2:80028229-80028248 | Msa0930910:intron | 35.0% |
! | CTTTGGAAACTAAGTGGTTA+TGG | + | chr6_2:80028235-80028254 | Msa0930910:intron | 35.0% |
CATGTTAGCTACAAATGACA+AGG | - | chr6_2:80028329-80028348 | None:intergenic | 35.0% | |
!! | TCTGTTCATGGCTTTAATTG+GGG | - | chr6_2:80028453-80028472 | None:intergenic | 35.0% |
!! | TACCAGTTGAAGTTGTTTTG+TGG | + | chr6_2:80028594-80028613 | Msa0930910:CDS | 35.0% |
! | CTTGTCTGAAATCTAACAGA+TGG | - | chr6_2:80028642-80028661 | None:intergenic | 35.0% |
CATCTGTTAGATTTCAGACA+AGG | + | chr6_2:80028640-80028659 | Msa0930910:CDS | 35.0% | |
TTGGAAAAGAGAGTCTACAA+TGG | + | chr6_2:80028823-80028842 | Msa0930910:CDS | 35.0% | |
AATAAGAATGACACACCTTC+AGG | - | chr6_2:80028914-80028933 | None:intergenic | 35.0% | |
TTCATCACTGTCCAAATTTG+TGG | + | chr6_2:80029091-80029110 | Msa0930910:intron | 35.0% | |
GTTGTATATTAGGTAACCAC+TGG | + | chr6_2:80029163-80029182 | Msa0930910:intron | 35.0% | |
! | TAACCACTGGTTGTCTAATA+TGG | + | chr6_2:80029176-80029195 | Msa0930910:intron | 35.0% |
TGTGAAATTACTGCATCAGT+TGG | + | chr6_2:80029218-80029237 | Msa0930910:intron | 35.0% | |
CATTAATTGTCAACCTACTC+TGG | + | chr6_2:80029254-80029273 | Msa0930910:intron | 35.0% | |
TACATTTGTATCTCCAGAGT+AGG | - | chr6_2:80029270-80029289 | None:intergenic | 35.0% | |
TTGAGAGTGATACTTTCTGA+TGG | - | chr6_2:80029319-80029338 | None:intergenic | 35.0% | |
!!! | TCGAACAGCTTTTAACTTCT+CGG | + | chr6_2:80029368-80029387 | Msa0930910:intron | 35.0% |
!!! | GCATTTGTTTTGATATTCCC+AGG | + | chr6_2:80029475-80029494 | Msa0930910:intron | 35.0% |
GGAAATACATAGTTTGATGG+TGG | - | chr6_2:80029665-80029684 | None:intergenic | 35.0% | |
GGAATTACCAAAATGTGTAG+CGG | + | chr6_2:80029696-80029715 | Msa0930910:intron | 35.0% | |
TGTGCCAACATATCATTGAA+TGG | + | chr6_2:80029787-80029806 | Msa0930910:intron | 35.0% | |
CATAACTTTGTTGGAGGAAA+TGG | + | chr6_2:80029894-80029913 | Msa0930910:intron | 35.0% | |
AGTGATCATACATGACTTTC+AGG | + | chr6_2:80029977-80029996 | Msa0930910:intron | 35.0% | |
GATGTTGTATCGTGTAATTC+AGG | + | chr6_2:80030041-80030060 | Msa0930910:exon | 35.0% | |
AATAGATAATCCGGGTTCAT+GGG | + | chr6_2:80030101-80030120 | Msa0930910:three_prime_UTR | 35.0% | |
! | TAAAGACGAAGAAGGTGTGA+GGG | - | chr6_2:80024338-80024357 | None:intergenic | 40.0% |
! | ATAAAGACGAAGAAGGTGTG+AGG | - | chr6_2:80024339-80024358 | None:intergenic | 40.0% |
ATGATGAATCGGAAGAGCTA+GGG | - | chr6_2:80024410-80024429 | None:intergenic | 40.0% | |
TGTTGGAGAATTACCAACGA+CGG | - | chr6_2:80024456-80024475 | None:intergenic | 40.0% | |
CTGCCTAAAGTTTCTACAGT+AGG | - | chr6_2:80024931-80024950 | None:intergenic | 40.0% | |
TTAAGGAGTGGAGTGATAAG+GGG | - | chr6_2:80024987-80025006 | None:intergenic | 40.0% | |
GTTAAGGAGTGGAGTGATAA+GGG | - | chr6_2:80024988-80025007 | None:intergenic | 40.0% | |
AGTTAAGGAGTGGAGTGATA+AGG | - | chr6_2:80024989-80025008 | None:intergenic | 40.0% | |
AGATCTTACCAGACTCTAAC+AGG | + | chr6_2:80025104-80025123 | Msa0930910:intron | 40.0% | |
ATGTCTAACCTGTTAGAGTC+TGG | - | chr6_2:80025115-80025134 | None:intergenic | 40.0% | |
TAACAGGTTAGACATCAGAG+AGG | + | chr6_2:80025120-80025139 | Msa0930910:intron | 40.0% | |
!! | AGGTGAAAGAAGCGTTGAAA+AGG | + | chr6_2:80025185-80025204 | Msa0930910:intron | 40.0% |
GCGTTGAAAAGGATGAGTAA+TGG | + | chr6_2:80025196-80025215 | Msa0930910:intron | 40.0% | |
GAAAAGGATGAGTAATGGCA+AGG | + | chr6_2:80025201-80025220 | Msa0930910:intron | 40.0% | |
ACAACATACCTATCGAAGTG+TGG | + | chr6_2:80025236-80025255 | Msa0930910:intron | 40.0% | |
! | AGACTTTTCCACACTTCGAT+AGG | - | chr6_2:80025247-80025266 | None:intergenic | 40.0% |
ATCGAAGTGTGGAAAAGTCT+TGG | + | chr6_2:80025247-80025266 | Msa0930910:intron | 40.0% | |
TCCCCCTTGTTCTTATAGAT+TGG | - | chr6_2:80025364-80025383 | None:intergenic | 40.0% | |
CAAGATTGCGCGAATTATAG+GGG | + | chr6_2:80025388-80025407 | Msa0930910:intron | 40.0% | |
TACCCTTTCCCATAACTTCA+TGG | - | chr6_2:80025434-80025453 | None:intergenic | 40.0% | |
CACGTTACGGATAACCAATT+TGG | + | chr6_2:80025481-80025500 | Msa0930910:intron | 40.0% | |
TCCCAGGCATAAAACCAAAT+TGG | - | chr6_2:80025498-80025517 | None:intergenic | 40.0% | |
!!! | AATTTGGTTTTATGCCTGGG+AGG | + | chr6_2:80025497-80025516 | Msa0930910:intron | 40.0% |
! | GAGTACCTAGAGAGATTTTG+TGG | + | chr6_2:80025626-80025645 | Msa0930910:intron | 40.0% |
GCTTTCCACAAAATCTCTCT+AGG | - | chr6_2:80025634-80025653 | None:intergenic | 40.0% | |
TGCCTATATTAGAGCTATCC+AGG | + | chr6_2:80025678-80025697 | Msa0930910:intron | 40.0% | |
AGCTATCCAGGATATGTATG+AGG | + | chr6_2:80025690-80025709 | Msa0930910:intron | 40.0% | |
GCTATCCAGGATATGTATGA+GGG | + | chr6_2:80025691-80025710 | Msa0930910:intron | 40.0% | |
CTATCCAGGATATGTATGAG+GGG | + | chr6_2:80025692-80025711 | Msa0930910:intron | 40.0% | |
TATCCAGGATATGTATGAGG+GGG | + | chr6_2:80025693-80025712 | Msa0930910:intron | 40.0% | |
TGGTGCAGTCCTATTGTTAT+GGG | - | chr6_2:80025763-80025782 | None:intergenic | 40.0% | |
TTGGTGCAGTCCTATTGTTA+TGG | - | chr6_2:80025764-80025783 | None:intergenic | 40.0% | |
ATAACAATAGGACTGCACCA+AGG | + | chr6_2:80025763-80025782 | Msa0930910:intron | 40.0% | |
TAACAATAGGACTGCACCAA+GGG | + | chr6_2:80025764-80025783 | Msa0930910:intron | 40.0% | |
TACATCTCAGTGCTAACTCT+TGG | - | chr6_2:80025846-80025865 | None:intergenic | 40.0% | |
!! | ATTCCGTCTTGTTTCTACTC+AGG | - | chr6_2:80025969-80025988 | None:intergenic | 40.0% |
TCTACCTTAGAGGTGAAAGT+TGG | + | chr6_2:80026024-80026043 | Msa0930910:intron | 40.0% | |
ATCTCCAACTTTCACCTCTA+AGG | - | chr6_2:80026031-80026050 | None:intergenic | 40.0% | |
GGGTCCATAGTACAAAATGA+CGG | + | chr6_2:80026087-80026106 | Msa0930910:intron | 40.0% | |
GTACATCATCGTATTCAAGC+TGG | + | chr6_2:80026126-80026145 | Msa0930910:intron | 40.0% | |
TGACATCATTAGAGAGAGAG+TGG | + | chr6_2:80026365-80026384 | Msa0930910:intron | 40.0% | |
GACATCATTAGAGAGAGAGT+GGG | + | chr6_2:80026366-80026385 | Msa0930910:intron | 40.0% | |
ACATCATTAGAGAGAGAGTG+GGG | + | chr6_2:80026367-80026386 | Msa0930910:intron | 40.0% | |
AGTCAGGTTAAAAGAGGTAG+AGG | + | chr6_2:80026498-80026517 | Msa0930910:intron | 40.0% | |
ATAACCACAGCCCAGATAAA+TGG | - | chr6_2:80026708-80026727 | None:intergenic | 40.0% | |
TTATCTGGGCTGTGGTTATT+AGG | + | chr6_2:80026709-80026728 | Msa0930910:intron | 40.0% | |
ACATAGTAGACGAGCAGAAA+AGG | + | chr6_2:80026913-80026932 | Msa0930910:intron | 40.0% | |
AATTCCTAAAGCAGTGTAGC+GGG | - | chr6_2:80027065-80027084 | None:intergenic | 40.0% | |
CAATTCCTAAAGCAGTGTAG+CGG | - | chr6_2:80027066-80027085 | None:intergenic | 40.0% | |
! | GATCAGGAGCAGGAAATTTT+AGG | + | chr6_2:80027101-80027120 | Msa0930910:intron | 40.0% |
! | TTTGAGACACCAGATTCTCA+GGG | - | chr6_2:80027196-80027215 | None:intergenic | 40.0% |
! | ATTTGAGACACCAGATTCTC+AGG | - | chr6_2:80027197-80027216 | None:intergenic | 40.0% |
TTGCTTCAGGGGTTATTTGT+TGG | + | chr6_2:80027221-80027240 | Msa0930910:intron | 40.0% | |
GTTCCTGAGAGTTCTTTATG+GGG | + | chr6_2:80027342-80027361 | Msa0930910:intron | 40.0% | |
TTCCTGAGAGTTCTTTATGG+GGG | + | chr6_2:80027343-80027362 | Msa0930910:intron | 40.0% | |
CTTCTGTTGTGTACCAAACT+TGG | + | chr6_2:80027406-80027425 | Msa0930910:intron | 40.0% | |
TACTTGTGAGTTGCCAAGTT+TGG | - | chr6_2:80027422-80027441 | None:intergenic | 40.0% | |
ACTTGGCAACTCACAAGTAT+TGG | + | chr6_2:80027423-80027442 | Msa0930910:intron | 40.0% | |
TGGTTACTCTTGACCTGAAT+TGG | + | chr6_2:80027515-80027534 | Msa0930910:intron | 40.0% | |
!! | TAACTTCTGGAATCCTGTTG+GGG | + | chr6_2:80027543-80027562 | Msa0930910:intron | 40.0% |
TGTAAGGAAATGCACACTCT+TGG | - | chr6_2:80027630-80027649 | None:intergenic | 40.0% | |
TGTCTATCAATGCAGTTCCT+AGG | + | chr6_2:80027816-80027835 | Msa0930910:intron | 40.0% | |
ATATTCATGCAGTCATGGAC+TGG | + | chr6_2:80027926-80027945 | Msa0930910:CDS | 40.0% | |
TATTCATGCAGTCATGGACT+GGG | + | chr6_2:80027927-80027946 | Msa0930910:CDS | 40.0% | |
!! | TCATGGACTGGGACTATTAT+TGG | + | chr6_2:80027938-80027957 | Msa0930910:CDS | 40.0% |
AAGAATAGAACTTACACCCG+GGG | - | chr6_2:80027966-80027985 | None:intergenic | 40.0% | |
AGGGCAAAAATAGAGAACTG+TGG | - | chr6_2:80028076-80028095 | None:intergenic | 40.0% | |
TCATCCTTGTCAACTTATGC+TGG | + | chr6_2:80028116-80028135 | Msa0930910:intron | 40.0% | |
CTTCAGGAAAATAAGGGTCT+AGG | - | chr6_2:80028408-80028427 | None:intergenic | 40.0% | |
CAGCACATGAATTCTGTTCA+TGG | - | chr6_2:80028465-80028484 | None:intergenic | 40.0% | |
! | TGTGCTGATCTCTAGTTGTT+AGG | + | chr6_2:80028478-80028497 | Msa0930910:intron | 40.0% |
TGCCACAAAACAACTTCAAC+TGG | - | chr6_2:80028599-80028618 | None:intergenic | 40.0% | |
!! | GTTGAAGTTGTTTTGTGGCA+AGG | + | chr6_2:80028599-80028618 | Msa0930910:CDS | 40.0% |
! | GTCTGAAATCTAACAGATGG+TGG | - | chr6_2:80028639-80028658 | None:intergenic | 40.0% |
TAACTACCACTCCAGATTCT+TGG | - | chr6_2:80028686-80028705 | None:intergenic | 40.0% | |
GCAAGCATGGGAAACAAATT+TGG | - | chr6_2:80028800-80028819 | None:intergenic | 40.0% | |
! | CTTTTCCAACTAGCAAGCAT+GGG | - | chr6_2:80028812-80028831 | None:intergenic | 40.0% |
! | TCTTTTCCAACTAGCAAGCA+TGG | - | chr6_2:80028813-80028832 | None:intergenic | 40.0% |
AAATGATGTCCCCACAAAAC+CGG | + | chr6_2:80028873-80028892 | Msa0930910:CDS | 40.0% | |
TCCATTGTAGCAGTTGCTAT+AGG | + | chr6_2:80028975-80028994 | Msa0930910:intron | 40.0% | |
ACACCATATTAGACAACCAG+TGG | - | chr6_2:80029182-80029201 | None:intergenic | 40.0% | |
CTGGTTGTCTAATATGGTGT+TGG | + | chr6_2:80029182-80029201 | Msa0930910:intron | 40.0% | |
TACTGCATCAGTTGGTTAAG+TGG | + | chr6_2:80029226-80029245 | Msa0930910:intron | 40.0% | |
TCTAGGGGTTAAACTGTGTT+TGG | - | chr6_2:80029737-80029756 | None:intergenic | 40.0% | |
GCTTATAACTTAGTCAGCAC+AGG | - | chr6_2:80029865-80029884 | None:intergenic | 40.0% | |
TGGTGACATAACTTTGTTGG+AGG | + | chr6_2:80029888-80029907 | Msa0930910:intron | 40.0% | |
!! | GAAATGGTGCACTGGTTATT+AGG | + | chr6_2:80029910-80029929 | Msa0930910:intron | 40.0% |
TGACTTTCAGGCAATGAAGA+TGG | + | chr6_2:80029989-80030008 | Msa0930910:intron | 40.0% | |
TTTCAGGCAATGAAGATGGA+AGG | + | chr6_2:80029993-80030012 | Msa0930910:intron | 40.0% | |
AGATGGAAGGATTGACCAAA+AGG | + | chr6_2:80030006-80030025 | Msa0930910:CDS | 40.0% | |
GATGGAAGGATTGACCAAAA+GGG | + | chr6_2:80030007-80030026 | Msa0930910:CDS | 40.0% | |
ATGGAAGGATTGACCAAAAG+GGG | + | chr6_2:80030008-80030027 | Msa0930910:CDS | 40.0% | |
GAATAGATAATCCGGGTTCA+TGG | + | chr6_2:80030100-80030119 | Msa0930910:three_prime_UTR | 40.0% | |
AATGCATTAACCCATGAACC+CGG | - | chr6_2:80030114-80030133 | None:intergenic | 40.0% | |
! | AGTCACTCTTTGATTTCTCC+AGG | - | chr6_2:80030170-80030189 | None:intergenic | 40.0% |
CTTGAAACTGCTCTTTACTG+CGG | + | chr6_2:80030227-80030246 | Msa0930910:three_prime_UTR | 40.0% | |
CTTTACTGCGGACTCTAATT+TGG | + | chr6_2:80030239-80030258 | Msa0930910:three_prime_UTR | 40.0% | |
GTAGAGAGAGAAAAGCAGGT+AGG | - | chr6_2:80024377-80024396 | None:intergenic | 45.0% | |
! | AATCGGAAGAGCTAGGGTTT+TGG | - | chr6_2:80024404-80024423 | None:intergenic | 45.0% |
GATGATGAATCGGAAGAGCT+AGG | - | chr6_2:80024411-80024430 | None:intergenic | 45.0% | |
GTGGTTGCTTGCTTGTGTAT+AGG | + | chr6_2:80024547-80024566 | Msa0930910:intron | 45.0% | |
CTACAGTAGGTTAACTGAGC+AGG | - | chr6_2:80024918-80024937 | None:intergenic | 45.0% | |
! | AAATGGCGGGGATATAACGT+TGG | - | chr6_2:80025024-80025043 | None:intergenic | 45.0% |
ATGAGTAATGGCAAGGCAGT+TGG | + | chr6_2:80025208-80025227 | Msa0930910:intron | 45.0% | |
TGAGTAATGGCAAGGCAGTT+GGG | + | chr6_2:80025209-80025228 | Msa0930910:intron | 45.0% | |
TGGAAAAGTCTTGGCGATAG+AGG | + | chr6_2:80025256-80025275 | Msa0930910:intron | 45.0% | |
AGTCTTGGCGATAGAGGAAT+TGG | + | chr6_2:80025262-80025281 | Msa0930910:intron | 45.0% | |
GTCTTGGCGATAGAGGAATT+GGG | + | chr6_2:80025263-80025282 | Msa0930910:intron | 45.0% | |
TATGAGGACGCAGAAAATGC+CGG | + | chr6_2:80025312-80025331 | Msa0930910:intron | 45.0% | |
! | AGAGATTTTGTGGAAAGCCC+TGG | + | chr6_2:80025636-80025655 | Msa0930910:intron | 45.0% |
! | GCAGATGATGTAGTCTTGCT+TGG | + | chr6_2:80025874-80025893 | Msa0930910:intron | 45.0% |
ATCATCGTATTCAAGCTGGG+TGG | + | chr6_2:80026130-80026149 | Msa0930910:intron | 45.0% | |
TTCAAGCTGGGTGGTTGAAA+TGG | + | chr6_2:80026139-80026158 | Msa0930910:intron | 45.0% | |
TTGAAATGGAGAAGAGCCTC+AGG | + | chr6_2:80026153-80026172 | Msa0930910:intron | 45.0% | |
CTTATCGCACAAAACACCTG+AGG | - | chr6_2:80026172-80026191 | None:intergenic | 45.0% | |
ACCGGCAATGTTGTATGGTA+CGG | + | chr6_2:80026239-80026258 | Msa0930910:intron | 45.0% | |
TCCGTACCATACAACATTGC+CGG | - | chr6_2:80026243-80026262 | None:intergenic | 45.0% | |
TGTTGTATGGTACGGAGTGT+TGG | + | chr6_2:80026247-80026266 | Msa0930910:intron | 45.0% | |
! | GTTGTATGGTACGGAGTGTT+GGG | + | chr6_2:80026248-80026267 | Msa0930910:intron | 45.0% |
CGCTTACTTTACTCTCGTGT+TGG | - | chr6_2:80026284-80026303 | None:intergenic | 45.0% | |
CGAGAGTAAAGTAAGCGTAG+CGG | + | chr6_2:80026287-80026306 | Msa0930910:intron | 45.0% | |
GTGGGAAGACTAGACATGAT+AGG | + | chr6_2:80026334-80026353 | Msa0930910:intron | 45.0% | |
CATCATTAGAGAGAGAGTGG+GGG | + | chr6_2:80026368-80026387 | Msa0930910:intron | 45.0% | |
GGTTTGGACATGTAGAGAGA+AGG | + | chr6_2:80026433-80026452 | Msa0930910:intron | 45.0% | |
AGATCAAATGGAGGAGAGTC+AGG | + | chr6_2:80026482-80026501 | Msa0930910:intron | 45.0% | |
GAGGAGAGTCAGGTTAAAAG+AGG | + | chr6_2:80026492-80026511 | Msa0930910:intron | 45.0% | |
AACGCCTTATCCCACTAAGT+GGG | - | chr6_2:80026639-80026658 | None:intergenic | 45.0% | |
TCATCCATTTATCTGGGCTG+TGG | + | chr6_2:80026701-80026720 | Msa0930910:intron | 45.0% | |
TAGTCAATCAACAATCGCGG+TGG | + | chr6_2:80026776-80026795 | Msa0930910:intron | 45.0% | |
!! | CACGTTGTTTTACATAGCGC+TGG | - | chr6_2:80026821-80026840 | None:intergenic | 45.0% |
CAGCGCTATGTAAAACAACG+TGG | + | chr6_2:80026819-80026838 | Msa0930910:intron | 45.0% | |
CGCTATGTAAAACAACGTGG+TGG | + | chr6_2:80026822-80026841 | Msa0930910:intron | 45.0% | |
ATGTAAAACAACGTGGTGGC+TGG | + | chr6_2:80026826-80026845 | Msa0930910:intron | 45.0% | |
GCTGGTAGAGAACTATGTTG+CGG | + | chr6_2:80026844-80026863 | Msa0930910:intron | 45.0% | |
GGAAAAAGTCGCAATGCAGT+GGG | - | chr6_2:80027044-80027063 | None:intergenic | 45.0% | |
! | TTTTCCCGCTACACTGCTTT+AGG | + | chr6_2:80027058-80027077 | Msa0930910:intron | 45.0% |
! | AGGAGCAGGAAATTTTAGGC+AGG | + | chr6_2:80027105-80027124 | Msa0930910:intron | 45.0% |
! | GGAGCAGGAAATTTTAGGCA+GGG | + | chr6_2:80027106-80027125 | Msa0930910:intron | 45.0% |
! | GTTGTAACTTGCATGGTGTG+TGG | + | chr6_2:80027152-80027171 | Msa0930910:intron | 45.0% |
! | TAACTTGCATGGTGTGTGGA+GGG | + | chr6_2:80027156-80027175 | Msa0930910:intron | 45.0% |
TGAGTGGCATGTCATTCTTG+AGG | + | chr6_2:80027301-80027320 | Msa0930910:intron | 45.0% | |
TCCTGTTGGGGCTATAACTT+TGG | + | chr6_2:80027555-80027574 | Msa0930910:intron | 45.0% | |
ACCAAAGTTATAGCCCCAAC+AGG | - | chr6_2:80027559-80027578 | None:intergenic | 45.0% | |
AGGAAATGCACACTCTTGGA+CGG | - | chr6_2:80027626-80027645 | None:intergenic | 45.0% | |
TTATTGGAAGAGCTTGAGCG+AGG | + | chr6_2:80027848-80027867 | Msa0930910:CDS | 45.0% | |
GAGACGGAACTGTTAGCTAT+GGG | + | chr6_2:80027885-80027904 | Msa0930910:CDS | 45.0% | |
AGAATAGAACTTACACCCGG+GGG | - | chr6_2:80027965-80027984 | None:intergenic | 45.0% | |
!! | CTAACAGATGGTGGATTGTC+TGG | - | chr6_2:80028630-80028649 | None:intergenic | 45.0% |
ACTTGCGTCAACCAAGAATC+TGG | + | chr6_2:80028672-80028691 | Msa0930910:CDS | 45.0% | |
! | TGTTTCCCATGCTTGCTAGT+TGG | + | chr6_2:80028804-80028823 | Msa0930910:CDS | 45.0% |
!! | AGATAGCTTCCGGTTTTGTG+GGG | - | chr6_2:80028885-80028904 | None:intergenic | 45.0% |
!! | GAGATAGCTTCCGGTTTTGT+GGG | - | chr6_2:80028886-80028905 | None:intergenic | 45.0% |
! | TGAGATAGCTTCCGGTTTTG+TGG | - | chr6_2:80028887-80028906 | None:intergenic | 45.0% |
AAGAATGACACACCTTCAGG+AGG | - | chr6_2:80028911-80028930 | None:intergenic | 45.0% | |
GCCTATAGCAACTGCTACAA+TGG | - | chr6_2:80028979-80028998 | None:intergenic | 45.0% | |
CTGTCCAAATTTGTGGACAG+TGG | + | chr6_2:80029098-80029117 | Msa0930910:intron | 45.0% | |
GTGTCCACTGTCCACAAATT+TGG | - | chr6_2:80029105-80029124 | None:intergenic | 45.0% | |
ACCAACCTCACTTCACTTAG+TGG | + | chr6_2:80029123-80029142 | Msa0930910:intron | 45.0% | |
CCAACCTCACTTCACTTAGT+GGG | + | chr6_2:80029124-80029143 | Msa0930910:intron | 45.0% | |
GTATCCCACTAAGTGAAGTG+AGG | - | chr6_2:80029131-80029150 | None:intergenic | 45.0% | |
TCACTTAGTGGGATACAGCT+TGG | + | chr6_2:80029135-80029154 | Msa0930910:intron | 45.0% | |
! | TAGCTCACCGCTACACATTT+TGG | - | chr6_2:80029706-80029725 | None:intergenic | 45.0% |
AAAATGTGTAGCGGTGAGCT+AGG | + | chr6_2:80029705-80029724 | Msa0930910:intron | 45.0% | |
AAATGTGTAGCGGTGAGCTA+GGG | + | chr6_2:80029706-80029725 | Msa0930910:intron | 45.0% | |
TGACCATTGCGTTTGTAACC+TGG | + | chr6_2:80030149-80030168 | Msa0930910:three_prime_UTR | 45.0% | |
TCTCCAGGTTACAAACGCAA+TGG | - | chr6_2:80030155-80030174 | None:intergenic | 45.0% | |
GAGAGAGAAAAGCAGGTAGG+TGG | - | chr6_2:80024374-80024393 | None:intergenic | 50.0% | |
TGGAGAATTACCAACGACGG+TGG | - | chr6_2:80024453-80024472 | None:intergenic | 50.0% | |
TTAGGCAGCATGCTCTTGTG+TGG | + | chr6_2:80024943-80024962 | Msa0930910:intron | 50.0% | |
GAGTGATAAGGGGTGATCTC+GGG | - | chr6_2:80024977-80024996 | None:intergenic | 50.0% | |
GGAGTGATAAGGGGTGATCT+CGG | - | chr6_2:80024978-80024997 | None:intergenic | 50.0% | |
GATATAACGTTGGCCAGGGT+GGG | - | chr6_2:80025014-80025033 | None:intergenic | 50.0% | |
CAGGTTAGACATCAGAGAGG+AGG | + | chr6_2:80025123-80025142 | Msa0930910:intron | 50.0% | |
TTGGCGATAGAGGAATTGGG+TGG | + | chr6_2:80025266-80025285 | Msa0930910:intron | 50.0% | |
CTACTTACTTCGACGCGTGA+TGG | + | chr6_2:80025537-80025556 | Msa0930910:intron | 50.0% | |
TGGAAAGCCCTGGAGAAGAA+AGG | + | chr6_2:80025646-80025665 | Msa0930910:intron | 50.0% | |
GGAAAGCCCTGGAGAAGAAA+GGG | + | chr6_2:80025647-80025666 | Msa0930910:intron | 50.0% | |
GAAAGCCCTGGAGAAGAAAG+GGG | + | chr6_2:80025648-80025667 | Msa0930910:intron | 50.0% | |
AAGCCCCCTCATACATATCC+TGG | - | chr6_2:80025699-80025718 | None:intergenic | 50.0% | |
AAGGACTTAGGGTTGACCCT+TGG | - | chr6_2:80025783-80025802 | None:intergenic | 50.0% | |
! | TAGTCTTGCTTGGTGAGTCG+AGG | + | chr6_2:80025884-80025903 | Msa0930910:intron | 50.0% |
! | AGTCTTGCTTGGTGAGTCGA+GGG | + | chr6_2:80025885-80025904 | Msa0930910:intron | 50.0% |
GAGTCGAGGGAGGAGTTAAA+CGG | + | chr6_2:80025898-80025917 | Msa0930910:intron | 50.0% | |
AGTCGAGGGAGGAGTTAAAC+GGG | + | chr6_2:80025899-80025918 | Msa0930910:intron | 50.0% | |
TAAACGGGAGGCTAGAGACT+TGG | + | chr6_2:80025914-80025933 | Msa0930910:intron | 50.0% | |
! | AGGCAAGCCTTAGAAGCGTA+CGG | + | chr6_2:80025937-80025956 | Msa0930910:intron | 50.0% |
!! | CCGTCTTGTTTCTACTCAGG+CGG | - | chr6_2:80025966-80025985 | None:intergenic | 50.0% |
CCGCCTGAGTAGAAACAAGA+CGG | + | chr6_2:80025963-80025982 | Msa0930910:intron | 50.0% | |
GAGAAGTGGGTCTACCTTAG+AGG | + | chr6_2:80026014-80026033 | Msa0930910:intron | 50.0% | |
GTCAGACCGGCAATGTTGTA+TGG | + | chr6_2:80026234-80026253 | Msa0930910:intron | 50.0% | |
! | AAGTAAGCGTAGCGGAGATG+AGG | + | chr6_2:80026295-80026314 | Msa0930910:intron | 50.0% |
AGGATGTTGCGTTGGATGAG+TGG | + | chr6_2:80026315-80026334 | Msa0930910:intron | 50.0% | |
GGATGTTGCGTTGGATGAGT+GGG | + | chr6_2:80026316-80026335 | Msa0930910:intron | 50.0% | |
TCTTCTTACCACGGCGTCTA+CGG | - | chr6_2:80026460-80026479 | None:intergenic | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | - | chr6_2:80026634-80026653 | None:intergenic | 50.0% | |
ACGCCTTATCCCACTAAGTG+GGG | - | chr6_2:80026638-80026657 | None:intergenic | 50.0% | |
CAACGCCTTATCCCACTAAG+TGG | - | chr6_2:80026640-80026659 | None:intergenic | 50.0% | |
TTGAACCTTCTGTGCGACTC+CGG | + | chr6_2:80027007-80027026 | Msa0930910:intron | 50.0% | |
GGGAAAAAGTCGCAATGCAG+TGG | - | chr6_2:80027045-80027064 | None:intergenic | 50.0% | |
! | GTAACTTGCATGGTGTGTGG+AGG | + | chr6_2:80027155-80027174 | Msa0930910:intron | 50.0% |
AACTTGCATGGTGTGTGGAG+GGG | + | chr6_2:80027157-80027176 | Msa0930910:intron | 50.0% | |
TGCCCCCATAAAGAACTCTC+AGG | - | chr6_2:80027348-80027367 | None:intergenic | 50.0% | |
GGTGAGAAGGGAATTGGAGA+CGG | + | chr6_2:80027869-80027888 | Msa0930910:CDS | 50.0% | |
GGAGACGGAACTGTTAGCTA+TGG | + | chr6_2:80027884-80027903 | Msa0930910:CDS | 50.0% | |
CGGAACTGTTAGCTATGGGA+TGG | + | chr6_2:80027889-80027908 | Msa0930910:CDS | 50.0% | |
GAATAGAACTTACACCCGGG+GGG | - | chr6_2:80027964-80027983 | None:intergenic | 50.0% | |
CGTCAACCAAGAATCTGGAG+TGG | + | chr6_2:80028677-80028696 | Msa0930910:CDS | 50.0% | |
AAGCTATCTCAGCCTCCTGA+AGG | + | chr6_2:80028896-80028915 | Msa0930910:CDS | 50.0% | |
CCCACTAAGTGAAGTGAGGT+TGG | - | chr6_2:80029127-80029146 | None:intergenic | 50.0% | |
AATGTGTAGCGGTGAGCTAG+GGG | + | chr6_2:80029707-80029726 | Msa0930910:intron | 50.0% | |
TGTTGGAGGAAATGGTGCAC+TGG | + | chr6_2:80029902-80029921 | Msa0930910:intron | 50.0% | |
AAGGATTGACCAAAAGGGGC+TGG | + | chr6_2:80030012-80030031 | Msa0930910:CDS | 50.0% | |
TGCGGACTCTAATTTGGCAG+TGG | + | chr6_2:80030245-80030264 | Msa0930910:three_prime_UTR | 50.0% | |
GCGGACTCTAATTTGGCAGT+GGG | + | chr6_2:80030246-80030265 | Msa0930910:three_prime_UTR | 50.0% | |
TCTGAAGGATCCACCGTCGT+TGG | + | chr6_2:80024440-80024459 | Msa0930910:CDS | 55.0% | |
AGGGTGGGAGAGTTAAGGAG+TGG | - | chr6_2:80024999-80025018 | None:intergenic | 55.0% | |
ACTCCTTAACTCTCCCACCC+TGG | + | chr6_2:80024998-80025017 | Msa0930910:intron | 55.0% | |
GGATATAACGTTGGCCAGGG+TGG | - | chr6_2:80025015-80025034 | None:intergenic | 55.0% | |
CGGGGATATAACGTTGGCCA+GGG | - | chr6_2:80025018-80025037 | None:intergenic | 55.0% | |
TAATGGCAAGGCAGTTGGGC+TGG | + | chr6_2:80025213-80025232 | Msa0930910:intron | 55.0% | |
GTGCTTCTTCTCCACTCGTC+CGG | - | chr6_2:80025334-80025353 | None:intergenic | 55.0% | |
TATGCCTGGGAGGTCGACTA+TGG | + | chr6_2:80025507-80025526 | Msa0930910:intron | 55.0% | |
! | GACGCGTGATGGAGCGATAT+CGG | + | chr6_2:80025548-80025567 | Msa0930910:intron | 55.0% |
! | CGTGATGGAGCGATATCGGA+CGG | + | chr6_2:80025552-80025571 | Msa0930910:intron | 55.0% |
CCTCACCCCTTTCTTCTCCA+GGG | - | chr6_2:80025656-80025675 | None:intergenic | 55.0% | |
TCCTCACCCCTTTCTTCTCC+AGG | - | chr6_2:80025657-80025676 | None:intergenic | 55.0% | |
TTCGACTAGTGTGAGGACGC+AGG | + | chr6_2:80025717-80025736 | Msa0930910:intron | 55.0% | |
ACTAGTGTGAGGACGCAGGA+TGG | + | chr6_2:80025721-80025740 | Msa0930910:intron | 55.0% | |
CTAGTGTGAGGACGCAGGAT+GGG | + | chr6_2:80025722-80025741 | Msa0930910:intron | 55.0% | |
TAGTGTGAGGACGCAGGATG+GGG | + | chr6_2:80025723-80025742 | Msa0930910:intron | 55.0% | |
GCGGAAACCGTACGCTTCTA+AGG | - | chr6_2:80025947-80025966 | None:intergenic | 55.0% | |
CTATCGGACAGCAGTCAGAC+CGG | + | chr6_2:80026221-80026240 | Msa0930910:intron | 55.0% | |
!! | GTATGGTACGGAGTGTTGGG+CGG | + | chr6_2:80026251-80026270 | Msa0930910:intron | 55.0% |
CGGAGATGAGGATGTTGCGT+TGG | + | chr6_2:80026307-80026326 | Msa0930910:intron | 55.0% | |
CTTCTTACCACGGCGTCTAC+GGG | - | chr6_2:80026459-80026478 | None:intergenic | 55.0% | |
ACTAAGTGGGGTCGGCTACA+TGG | - | chr6_2:80026626-80026645 | None:intergenic | 55.0% | |
ATGTAGCCGACCCCACTTAG+TGG | + | chr6_2:80026625-80026644 | Msa0930910:intron | 55.0% | |
TGTAGCCGACCCCACTTAGT+GGG | + | chr6_2:80026626-80026645 | Msa0930910:intron | 55.0% | |
CGACCCCACTTAGTGGGATA+AGG | + | chr6_2:80026632-80026651 | Msa0930910:intron | 55.0% | |
GCGGTGGTACGTGATGTAGT+GGG | + | chr6_2:80026792-80026811 | Msa0930910:intron | 55.0% | |
CGGTGGTACGTGATGTAGTG+GGG | + | chr6_2:80026793-80026812 | Msa0930910:intron | 55.0% | |
AGTCGCAATGCAGTGGGTAC+CGG | - | chr6_2:80027038-80027057 | None:intergenic | 55.0% | |
ACTTGCATGGTGTGTGGAGG+GGG | + | chr6_2:80027158-80027177 | Msa0930910:intron | 55.0% | |
! | GTGTGTGGAGGGGGTTGATT+CGG | + | chr6_2:80027167-80027186 | Msa0930910:intron | 55.0% |
ATTCGGCCACCCTGAGAATC+TGG | + | chr6_2:80027184-80027203 | Msa0930910:intron | 55.0% | |
GAGACACCAGATTCTCAGGG+TGG | - | chr6_2:80027193-80027212 | None:intergenic | 55.0% | |
AGAGCTTGAGCGAGGTGAGA+AGG | + | chr6_2:80027856-80027875 | Msa0930910:CDS | 55.0% | |
GAGCTTGAGCGAGGTGAGAA+GGG | + | chr6_2:80027857-80027876 | Msa0930910:CDS | 55.0% | |
GAGCGAGGTGAGAAGGGAAT+TGG | + | chr6_2:80027863-80027882 | Msa0930910:CDS | 55.0% | |
TGGGACTATTATTGGCCCCC+CGG | + | chr6_2:80027946-80027965 | Msa0930910:CDS | 55.0% | |
GGGTGTGCGCTGTGTGTATT+GGG | + | chr6_2:80028200-80028219 | Msa0930910:intron | 55.0% | |
CAGGAGGCTGAGATAGCTTC+CGG | - | chr6_2:80028895-80028914 | None:intergenic | 55.0% | |
! | ATCTCAGCACCAGCCCCTTT+TGG | - | chr6_2:80030024-80030043 | None:intergenic | 55.0% |
TGGCCAGGGTGGGAGAGTTA+AGG | - | chr6_2:80025004-80025023 | None:intergenic | 60.0% | |
GCGGGGATATAACGTTGGCC+AGG | - | chr6_2:80025019-80025038 | None:intergenic | 60.0% | |
! | TCGTCGGATTCAGGAGCACG+AGG | + | chr6_2:80025165-80025184 | Msa0930910:intron | 60.0% |
CGCAGAAAATGCCGGACGAG+TGG | + | chr6_2:80025320-80025339 | Msa0930910:intron | 60.0% | |
GCTTCCATAGTCGACCTCCC+AGG | - | chr6_2:80025514-80025533 | None:intergenic | 60.0% | |
CCCTGGAGAAGAAAGGGGTG+AGG | + | chr6_2:80025653-80025672 | Msa0930910:intron | 60.0% | |
AGGGGGCTTCGACTAGTGTG+AGG | + | chr6_2:80025710-80025729 | Msa0930910:intron | 60.0% | |
AGGACGCAGGATGGGGATAC+CGG | + | chr6_2:80025730-80025749 | Msa0930910:intron | 60.0% | |
! | CTTGCTTGGTGAGTCGAGGG+AGG | + | chr6_2:80025888-80025907 | Msa0930910:intron | 60.0% |
CGAGGGAGGAGTTAAACGGG+AGG | + | chr6_2:80025902-80025921 | Msa0930910:intron | 60.0% | |
ACGGGAGGCTAGAGACTTGG+AGG | + | chr6_2:80025917-80025936 | Msa0930910:intron | 60.0% | |
CGCGGTGGTACGTGATGTAG+TGG | + | chr6_2:80026791-80026810 | Msa0930910:intron | 60.0% | |
GTCGCAATGCAGTGGGTACC+GGG | - | chr6_2:80027037-80027056 | None:intergenic | 60.0% | |
GGGACTATTATTGGCCCCCC+GGG | + | chr6_2:80027947-80027966 | Msa0930910:CDS | 60.0% | |
GGGGTGTGCGCTGTGTGTAT+TGG | + | chr6_2:80028199-80028218 | Msa0930910:intron | 60.0% | |
TGCGGCCGTAGCACTGTGTG+TGG | + | chr6_2:80026862-80026881 | Msa0930910:intron | 65.0% | |
GGCCGTAGCACTGTGTGTGG+CGG | + | chr6_2:80026865-80026884 | Msa0930910:intron | 65.0% | |
CGCCGCCACACACAGTGCTA+CGG | - | chr6_2:80026870-80026889 | None:intergenic | 65.0% | |
GCTTGCCGGAGTCGCACAGA+AGG | - | chr6_2:80027015-80027034 | None:intergenic | 65.0% | |
GAGAAGGCCCGTAGACGCCG+TGG | + | chr6_2:80026449-80026468 | Msa0930910:intron | 70.0% | |
CTGTGCGACTCCGGCAAGCC+CGG | + | chr6_2:80027016-80027035 | Msa0930910:intron | 70.0% | |
!! | GCAGTGGGTACCGGGCTTGC+CGG | - | chr6_2:80027029-80027048 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_2 | gene | 80024297 | 80030398 | 80024297 | ID=Msa0930910;Name=Msa0930910 |
chr6_2 | mRNA | 80024297 | 80030398 | 80024297 | ID=Msa0930910-mRNA-1;Parent=Msa0930910;Name=Msa0930910-mRNA-1;_AED=0.06;_eAED=0.06;_QI=137|1|1|1|0.75|0.8|5|341|159 |
chr6_2 | exon | 80024297 | 80024461 | 80024297 | ID=Msa0930910-mRNA-1:exon:13978;Parent=Msa0930910-mRNA-1 |
chr6_2 | exon | 80027831 | 80027970 | 80027831 | ID=Msa0930910-mRNA-1:exon:13979;Parent=Msa0930910-mRNA-1 |
chr6_2 | exon | 80028573 | 80028698 | 80028573 | ID=Msa0930910-mRNA-1:exon:13980;Parent=Msa0930910-mRNA-1 |
chr6_2 | exon | 80028791 | 80028917 | 80028791 | ID=Msa0930910-mRNA-1:exon:13981;Parent=Msa0930910-mRNA-1 |
chr6_2 | exon | 80029999 | 80030398 | 80029999 | ID=Msa0930910-mRNA-1:exon:13982;Parent=Msa0930910-mRNA-1 |
chr6_2 | five_prime_UTR | 80024297 | 80024433 | 80024297 | ID=Msa0930910-mRNA-1:five_prime_utr;Parent=Msa0930910-mRNA-1 |
chr6_2 | CDS | 80024434 | 80024461 | 80024434 | ID=Msa0930910-mRNA-1:cds;Parent=Msa0930910-mRNA-1 |
chr6_2 | CDS | 80027831 | 80027970 | 80027831 | ID=Msa0930910-mRNA-1:cds;Parent=Msa0930910-mRNA-1 |
chr6_2 | CDS | 80028573 | 80028698 | 80028573 | ID=Msa0930910-mRNA-1:cds;Parent=Msa0930910-mRNA-1 |
chr6_2 | CDS | 80028791 | 80028917 | 80028791 | ID=Msa0930910-mRNA-1:cds;Parent=Msa0930910-mRNA-1 |
chr6_2 | CDS | 80029999 | 80030057 | 80029999 | ID=Msa0930910-mRNA-1:cds;Parent=Msa0930910-mRNA-1 |
chr6_2 | three_prime_UTR | 80030058 | 80030398 | 80030058 | ID=Msa0930910-mRNA-1:three_prime_utr;Parent=Msa0930910-mRNA-1 |
Gene Sequence |
Protein sequence |