Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0157080 | sp|Q84LK0|MSH1_ARATH | 62.559 | 633 | 209 | 4 | 1 | 632 | 502 | 1107 | 0.0 | 791 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0157080 | G7I6Q0 | 97.003 | 634 | 19 | 0 | 1 | 634 | 504 | 1137 | 0.0 | 1268 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0034590 | Msa0157080 | 0.814638 | 1.391150e-51 | -8.615850e-47 |
| Msa0042520 | Msa0157080 | 0.813890 | 2.035239e-51 | -8.615850e-47 |
| Msa0065460 | Msa0157080 | 0.808850 | 2.529248e-50 | -8.615850e-47 |
| Msa0102290 | Msa0157080 | 0.814322 | 1.634491e-51 | -8.615850e-47 |
| Msa0129820 | Msa0157080 | 0.822189 | 2.706003e-53 | -8.615850e-47 |
| Msa0145590 | Msa0157080 | 0.807886 | 4.059564e-50 | -8.615850e-47 |
| Msa0147070 | Msa0157080 | 0.814255 | 1.691229e-51 | -8.615850e-47 |
| Msa0157080 | Msa0167570 | 0.807061 | 6.075962e-50 | -8.615850e-47 |
| Msa0157080 | Msa0168470 | 0.827882 | 1.224164e-54 | -8.615850e-47 |
| Msa0157080 | Msa0237690 | 0.801214 | 1.000861e-48 | -8.615850e-47 |
| Msa0157080 | Msa0261020 | 0.803841 | 2.875227e-49 | -8.615850e-47 |
| Msa0157080 | Msa0284980 | 0.811793 | 5.861297e-51 | -8.615850e-47 |
| Msa0157080 | Msa0388120 | 0.804219 | 2.399758e-49 | -8.615850e-47 |
| Msa0157080 | Msa0429490 | 0.800453 | 1.431166e-48 | -8.615850e-47 |
| Msa0157080 | Msa0436430 | 0.811799 | 5.842157e-51 | -8.615850e-47 |
| Msa0157080 | Msa0474290 | 0.802019 | 6.841802e-49 | -8.615850e-47 |
| Msa0157080 | Msa0518720 | 0.802117 | 6.530855e-49 | -8.615850e-47 |
| Msa0157080 | Msa0527420 | 0.802191 | 6.307190e-49 | -8.615850e-47 |
| Msa0157080 | Msa0537960 | 0.801324 | 9.499233e-49 | -8.615850e-47 |
| Msa0157080 | Msa0538020 | 0.807570 | 4.738574e-50 | -8.615850e-47 |
| Msa0157080 | Msa0560380 | 0.822463 | 2.336941e-53 | -8.615850e-47 |
| Msa0157080 | Msa0608720 | 0.803796 | 2.938626e-49 | -8.615850e-47 |
| Msa0157080 | Msa0619450 | 0.808293 | 3.325522e-50 | -8.615850e-47 |
| Msa0157080 | Msa0619530 | 0.800636 | 1.313606e-48 | -8.615850e-47 |
| Msa0157080 | Msa0639040 | 0.825217 | 5.288669e-54 | -8.615850e-47 |
| Msa0157080 | Msa0649140 | 0.812694 | 3.726375e-51 | -8.615850e-47 |
| Msa0157080 | Msa0659580 | 0.805682 | 1.186338e-49 | -8.615850e-47 |
| Msa0157080 | Msa0788490 | 0.822513 | 2.275236e-53 | -8.615850e-47 |
| Msa0157080 | Msa0799150 | 0.812955 | 3.266843e-51 | -8.615850e-47 |
| Msa0157080 | Msa0816390 | 0.816828 | 4.520818e-52 | -8.615850e-47 |
| Msa0157080 | Msa0856790 | 0.807784 | 4.267454e-50 | -8.615850e-47 |
| Msa0157080 | Msa0881880 | 0.812864 | 3.421304e-51 | -8.615850e-47 |
| Msa0157080 | Msa1054620 | 0.811874 | 5.628435e-51 | -8.615850e-47 |
| Msa0157080 | Msa1061420 | 0.803135 | 4.028625e-49 | -8.615850e-47 |
| Msa0157080 | Msa1076070 | 0.802534 | 5.361402e-49 | -8.615850e-47 |
| Msa0157080 | Msa1126320 | 0.809280 | 2.045259e-50 | -8.615850e-47 |
| Msa0157080 | Msa1157940 | 0.802444 | 5.593831e-49 | -8.615850e-47 |
| Msa0157080 | Msa1167150 | 0.800644 | 1.308179e-48 | -8.615850e-47 |
| Msa0157080 | Msa1177300 | 0.820909 | 5.345798e-53 | -8.615850e-47 |
| Msa0157080 | Msa1208470 | 0.818271 | 2.138778e-52 | -8.615850e-47 |
| Msa0157080 | Msa1223050 | 0.808594 | 2.867925e-50 | -8.615850e-47 |
| Msa0157080 | Msa1225280 | 0.810888 | 9.213341e-51 | -8.615850e-47 |
| Msa0157080 | Msa1269550 | 0.805282 | 1.439453e-49 | -8.615850e-47 |
| Msa0157080 | Msa1317090 | 0.808404 | 3.149378e-50 | -8.615850e-47 |
| Msa0157080 | Msa1350130 | 0.805724 | 1.162737e-49 | -8.615850e-47 |
| Msa0157080 | Msa1357710 | 0.806899 | 6.573046e-50 | -8.615850e-47 |
| Msa0157080 | Msa1379930 | 0.813146 | 2.967159e-51 | -8.615850e-47 |
| Msa0157080 | Msa1410360 | 0.815044 | 1.131052e-51 | -8.615850e-47 |
| Msa0157080 | Msa1462700 | 0.805981 | 1.026800e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0157080 | MtrunA17_Chr1g0168681 | 97.003 | 634 | 19 | 0 | 1 | 634 | 504 | 1137 | 0.0 | 1268 |
| Msa0157080 | MtrunA17_Chr7g0269931 | 36.126 | 191 | 116 | 2 | 257 | 441 | 1023 | 1213 | 6.81e-26 | 114 |
| Msa0157080 | MtrunA17_Chr5g0428751 | 33.333 | 195 | 120 | 4 | 261 | 450 | 430 | 619 | 2.46e-21 | 99.0 |
| Msa0157080 | MtrunA17_Chr6g0485261 | 32.474 | 194 | 111 | 4 | 262 | 440 | 897 | 1085 | 1.54e-19 | 93.6 |
| Msa0157080 | MtrunA17_Chr4g0062701 | 31.771 | 192 | 119 | 4 | 263 | 442 | 664 | 855 | 1.26e-18 | 90.5 |
| Msa0157080 | MtrunA17_Chr4g0047451 | 27.586 | 203 | 135 | 3 | 240 | 441 | 414 | 605 | 3.31e-17 | 85.9 |
| Msa0157080 | MtrunA17_Chr1g0203461 | 30.279 | 251 | 149 | 7 | 207 | 440 | 746 | 987 | 3.45e-16 | 82.8 |
| Msa0157080 | MtrunA17_Chr5g0399431 | 24.762 | 315 | 186 | 12 | 89 | 386 | 140 | 420 | 5.62e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0157080 | AT3G24320.2 | 62.559 | 633 | 209 | 4 | 1 | 632 | 257 | 862 | 0.0 | 793 |
| Msa0157080 | AT3G24320.1 | 62.559 | 633 | 209 | 4 | 1 | 632 | 502 | 1107 | 0.0 | 791 |
| Msa0157080 | AT4G02070.2 | 36.634 | 202 | 117 | 6 | 245 | 440 | 1064 | 1260 | 2.23e-24 | 109 |
| Msa0157080 | AT4G02070.1 | 36.634 | 202 | 117 | 6 | 245 | 440 | 1067 | 1263 | 2.44e-24 | 109 |
| Msa0157080 | AT5G54090.1 | 34.199 | 231 | 129 | 7 | 240 | 462 | 424 | 639 | 5.12e-22 | 101 |
| Msa0157080 | AT3G24495.1 | 28.455 | 369 | 207 | 15 | 139 | 467 | 711 | 1062 | 2.60e-21 | 99.8 |
| Msa0157080 | AT4G25540.1 | 32.381 | 210 | 124 | 6 | 263 | 461 | 814 | 1016 | 1.48e-17 | 87.8 |
| Msa0157080 | AT3G18524.1 | 30.208 | 192 | 120 | 4 | 263 | 442 | 663 | 852 | 1.70e-16 | 84.0 |
| Msa0157080 | AT4G17380.1 | 27.727 | 220 | 143 | 4 | 260 | 478 | 547 | 751 | 4.57e-15 | 79.3 |
| Msa0157080 | AT1G65070.1 | 27.419 | 248 | 170 | 5 | 200 | 440 | 331 | 575 | 2.80e-14 | 77.0 |
| Msa0157080 | AT4G17380.2 | 32.593 | 135 | 88 | 1 | 260 | 391 | 547 | 681 | 3.54e-14 | 76.6 |
| Msa0157080 | AT1G65070.4 | 30.939 | 181 | 122 | 2 | 261 | 440 | 397 | 575 | 3.86e-14 | 76.6 |
| Msa0157080 | AT1G65070.2 | 30.939 | 181 | 122 | 2 | 261 | 440 | 397 | 575 | 4.00e-14 | 76.6 |
| Msa0157080 | AT1G65070.3 | 27.419 | 248 | 170 | 5 | 200 | 440 | 331 | 575 | 4.23e-14 | 76.3 |
Find 145 sgRNAs with CRISPR-Local
Find 517 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATAAAAGACAACCTTTA+AGG | 0.169421 | 1_4:+24031651 | None:intergenic |
| GTTGGTATTCTATTCCTTAA+AGG | 0.215784 | 1_4:-24031665 | Msa0157080:three_prime_UTR |
| CATCAGCTATATTGCTTAAC+AGG | 0.226773 | 1_4:+24031949 | None:intergenic |
| TATATACTACCTCAAACTTC+TGG | 0.234822 | 1_4:+24036306 | None:intergenic |
| TGATCACAAAAGTTCATTTC+AGG | 0.235726 | 1_4:-24035197 | Msa0157080:intron |
| GATAAAGATCTTCAGCTCTT+TGG | 0.239855 | 1_4:+24033104 | None:intergenic |
| AAGCATGATAGAGTCAAAAT+AGG | 0.256430 | 1_4:+24035246 | None:intergenic |
| ACTTGGGATATGTGGACTTA+TGG | 0.268862 | 1_4:-24035293 | Msa0157080:CDS |
| TTGCCTTGACATTTGCTTCA+TGG | 0.279311 | 1_4:+24037127 | None:intergenic |
| CTTGATAGAAGTGGCTGTTT+GGG | 0.282969 | 1_4:-24033316 | Msa0157080:CDS |
| TGATTAGCAGAGTTTCTATT+TGG | 0.293781 | 1_4:+24031994 | None:intergenic |
| TTCCTGGAACTAGGAAATAA+AGG | 0.294559 | 1_4:+24032030 | None:intergenic |
| CAAGGCAAACACTAGAGTTT+TGG | 0.296309 | 1_4:-24037112 | Msa0157080:CDS |
| TTCCTTTATTTCCTAGTTCC+AGG | 0.297039 | 1_4:-24032032 | Msa0157080:CDS |
| ATCAATGGTAATAATTCTAA+TGG | 0.303527 | 1_4:-24033013 | Msa0157080:CDS |
| AACACTTTATACCAAATATA+TGG | 0.309024 | 1_4:-24037376 | Msa0157080:CDS |
| ACCACACTGCTTCCTGTTCC+CGG | 0.334290 | 1_4:+24037408 | None:intergenic |
| GATGGTAAGCATCGGAATTT+CGG | 0.338305 | 1_4:-24031930 | Msa0157080:CDS |
| GCAAAAGGGACTTGCATTGC+AGG | 0.339981 | 1_4:-24033355 | Msa0157080:CDS |
| ATTTGTGCTGCTGCACTACT+TGG | 0.350396 | 1_4:-24035310 | Msa0157080:CDS |
| TCTTGATAGAAGTGGCTGTT+TGG | 0.356538 | 1_4:-24033317 | Msa0157080:CDS |
| TCTGCTATGTTGAACCAATA+TGG | 0.360428 | 1_4:+24035424 | None:intergenic |
| GAAATTATTGTATGTTGTAT+TGG | 0.361271 | 1_4:-24031707 | Msa0157080:three_prime_UTR |
| TTCTGGGATTCTACTATTGT+AGG | 0.370554 | 1_4:+24036323 | None:intergenic |
| TCCTTATGTGAAACTTCAAT+TGG | 0.371476 | 1_4:+24032929 | None:intergenic |
| GGGGTACCAGTCCATATATT+TGG | 0.374561 | 1_4:+24037365 | None:intergenic |
| GGAGTTCTGCTATAAAATCT+TGG | 0.386208 | 1_4:+24032879 | None:intergenic |
| TCCAATTGAAGTTTCACATA+AGG | 0.387461 | 1_4:-24032930 | Msa0157080:CDS |
| AGGGAGAAATATCTTATTCC+CGG | 0.394099 | 1_4:-24037427 | Msa0157080:CDS |
| TAGTTGGTTTATTACCATAT+TGG | 0.395583 | 1_4:-24035438 | Msa0157080:CDS |
| CCTACGTAGAGTTTCTTATC+TGG | 0.396333 | 1_4:+24032743 | None:intergenic |
| TGCAGAAAACTATGCAAAAC+AGG | 0.403387 | 1_4:-24033053 | Msa0157080:CDS |
| ATATACTACCTCAAACTTCT+GGG | 0.403563 | 1_4:+24036307 | None:intergenic |
| GTGAAGGGAGAAGAAGGAAA+TGG | 0.407787 | 1_4:-24036352 | Msa0157080:CDS |
| ATGGGCACAACTTGCATTGA+TGG | 0.412451 | 1_4:-24033223 | Msa0157080:CDS |
| CCCATCCAACATACTAAAAC+AGG | 0.412848 | 1_4:-24031620 | Msa0157080:three_prime_UTR |
| AACAAGCACTAGGCTCCTTT+CGG | 0.416182 | 1_4:+24033405 | None:intergenic |
| TGTTTAATTTGTTCCTCTCC+AGG | 0.418327 | 1_4:+24037344 | None:intergenic |
| GAACTTCGATCCATCATTGC+TGG | 0.422226 | 1_4:-24033433 | Msa0157080:CDS |
| TTCGGTGGTTCCAGCAATGA+TGG | 0.430365 | 1_4:+24033423 | None:intergenic |
| CTTGATTTACCACCACCATT+TGG | 0.431025 | 1_4:+24035346 | None:intergenic |
| AATATCTTATTCCCGGGAAC+AGG | 0.435984 | 1_4:-24037420 | Msa0157080:CDS |
| TGAAGGGAGAAGAAGGAAAT+GGG | 0.436793 | 1_4:-24036351 | Msa0157080:CDS |
| GTCTCAACTTAGAGCTCCTA+AGG | 0.447138 | 1_4:-24037447 | Msa0157080:CDS |
| CAATCATTATTTCTATTGAC+AGG | 0.448373 | 1_4:-24035370 | Msa0157080:CDS |
| TAGCAGAGTTTCTATTTGGC+AGG | 0.450010 | 1_4:+24031998 | None:intergenic |
| CTCAGGAATTCCTTCCCTCT+TGG | 0.450796 | 1_4:+24033135 | None:intergenic |
| TTGAAGAGCCTATAGTCATC+GGG | 0.453265 | 1_4:+24032786 | None:intergenic |
| TTGACGATATGGAGTCTGTA+TGG | 0.455195 | 1_4:-24037697 | Msa0157080:CDS |
| AAACATGCTTTAGATTCTAA+AGG | 0.460656 | 1_4:-24037317 | Msa0157080:CDS |
| AGCATGATAGAGTCAAAATA+GGG | 0.468162 | 1_4:+24035247 | None:intergenic |
| GAATAAGATATTTCTCCCTT+AGG | 0.469726 | 1_4:+24037431 | None:intergenic |
| GATTCTAAAGGTAGAAAGGT+AGG | 0.469843 | 1_4:-24037305 | Msa0157080:CDS |
| GGAAGCCTCGATTCGGAAGC+TGG | 0.470447 | 1_4:+24031970 | None:intergenic |
| CGAGGAACAGAGACTGCAAA+AGG | 0.471698 | 1_4:-24033370 | Msa0157080:CDS |
| AGCAATGATGGATCGAAGTT+CGG | 0.472676 | 1_4:+24033435 | None:intergenic |
| GCTCTTTGGATAACAATCTC+AGG | 0.474099 | 1_4:+24033118 | None:intergenic |
| TCAATGGTAATAATTCTAAT+GGG | 0.475596 | 1_4:-24033012 | Msa0157080:CDS |
| AATCGCAAGATGAAGATAGT+TGG | 0.476644 | 1_4:-24035454 | Msa0157080:CDS |
| CGTGCACATCGATCGAAAGA+AGG | 0.477385 | 1_4:-24032071 | Msa0157080:CDS |
| TTTAGATTCTAAAGGTAGAA+AGG | 0.482930 | 1_4:-24037309 | Msa0157080:CDS |
| CACATGAGCATATAACGCTT+TGG | 0.483246 | 1_4:+24037011 | None:intergenic |
| GAGTTTCTATTTGGCAGGCC+AGG | 0.484016 | 1_4:+24032003 | None:intergenic |
| TTGTAAGTACATATATTAGT+TGG | 0.487358 | 1_4:-24031683 | Msa0157080:three_prime_UTR |
| AGTAGAATCCCAGAAGTTTG+AGG | 0.489639 | 1_4:-24036315 | Msa0157080:intron |
| GATTGACGAAGTAATATCTC+TGG | 0.490505 | 1_4:-24037774 | Msa0157080:CDS |
| GCTGCACTACTTGGGATATG+TGG | 0.491552 | 1_4:-24035301 | Msa0157080:CDS |
| GGAATCACGGCGGATTCAGC+AGG | 0.494688 | 1_4:+24035268 | None:intergenic |
| GTTTAATTTGTTCCTCTCCA+GGG | 0.501339 | 1_4:+24037345 | None:intergenic |
| ATGGACAAACAAAACCTACT+TGG | 0.502117 | 1_4:-24033204 | Msa0157080:CDS |
| AAGTAAGCACATCATTTATG+TGG | 0.507055 | 1_4:+24037654 | None:intergenic |
| CCACACTGCTTCCTGTTCCC+GGG | 0.508620 | 1_4:+24037409 | None:intergenic |
| TTTAGTATGTTGGATGGGAA+GGG | 0.508688 | 1_4:+24031625 | None:intergenic |
| ACAGGAAGCAGTGTGGTTCA+AGG | 0.510474 | 1_4:-24037402 | Msa0157080:CDS |
| AACACTGTACACAAAGCAAT+GGG | 0.515181 | 1_4:-24033241 | Msa0157080:CDS |
| TTTCTATTGACAGGACCAAA+TGG | 0.518729 | 1_4:-24035361 | Msa0157080:CDS |
| TTTAATTTGTTCCTCTCCAG+GGG | 0.519994 | 1_4:+24037346 | None:intergenic |
| GTGTTTCTTAATTGACACTA+GGG | 0.524161 | 1_4:-24032819 | Msa0157080:CDS |
| AGGTGGAGGCCGCCTTATCA+AGG | 0.528089 | 1_4:-24037259 | Msa0157080:intron |
| CTTGCAGTGAAGGGAGAAGA+AGG | 0.529921 | 1_4:-24036358 | Msa0157080:intron |
| AGGAATAGCAGAGAAGGAAC+TGG | 0.530686 | 1_4:+24037730 | None:intergenic |
| CTTAACAGGAAGCCTCGATT+CGG | 0.532794 | 1_4:+24031963 | None:intergenic |
| TTTGAAACTGCCAAGAGGGA+AGG | 0.541249 | 1_4:-24033145 | Msa0157080:CDS |
| CTTGAAGAGCCTATAGTCAT+CGG | 0.544068 | 1_4:+24032785 | None:intergenic |
| TCGATCGAAAGAAGGGATGC+AGG | 0.546225 | 1_4:-24032063 | Msa0157080:CDS |
| ATTGAAACTCTTGATAGAAG+TGG | 0.546230 | 1_4:-24033325 | Msa0157080:CDS |
| TTCATCAGGAATAGCAGAGA+AGG | 0.546650 | 1_4:+24037724 | None:intergenic |
| AATTGAAGTTTCACATAAGG+AGG | 0.549162 | 1_4:-24032927 | Msa0157080:CDS |
| CCATCTTGCAGCATCCAAGT+AGG | 0.551358 | 1_4:+24033190 | None:intergenic |
| AGTGTTTCTTAATTGACACT+AGG | 0.551584 | 1_4:-24032820 | Msa0157080:CDS |
| TTTGTGCTGCTGCACTACTT+GGG | 0.553681 | 1_4:-24035309 | Msa0157080:CDS |
| GTCCTCAGCTGCTTTGTCCA+CGG | 0.556624 | 1_4:+24037631 | None:intergenic |
| GTGCACATCGATCGAAAGAA+GGG | 0.558891 | 1_4:-24032070 | Msa0157080:CDS |
| TCTTAATTGACACTAGGGAA+TGG | 0.559744 | 1_4:-24032814 | Msa0157080:CDS |
| CAGGAAGCAGTGTGGTTCAA+GGG | 0.561932 | 1_4:-24037401 | Msa0157080:CDS |
| CCTACTTGGATGCTGCAAGA+TGG | 0.562471 | 1_4:-24033190 | Msa0157080:CDS |
| TTTATACCAAATATATGGAC+TGG | 0.566964 | 1_4:-24037371 | Msa0157080:CDS |
| TTGATAGAAGTGGCTGTTTG+GGG | 0.567646 | 1_4:-24033315 | Msa0157080:CDS |
| GTTCTTGATGTTCAGCGGCA+AGG | 0.568428 | 1_4:+24033261 | None:intergenic |
| GTAGAAAGGTAGGTGAGGAA+TGG | 0.569613 | 1_4:-24037295 | Msa0157080:CDS |
| GGGAGAAATATCTTATTCCC+GGG | 0.571092 | 1_4:-24037426 | Msa0157080:CDS |
| GAATTGTCTAGTTACATCAA+TGG | 0.571307 | 1_4:-24033028 | Msa0157080:CDS |
| CTGTTAAGCAATATAGCTGA+TGG | 0.574362 | 1_4:-24031948 | Msa0157080:CDS |
| ATCAACCAGCTTCCGAATCG+AGG | 0.577794 | 1_4:-24031975 | Msa0157080:CDS |
| AAATGATGTGCTTACTTCCG+TGG | 0.579926 | 1_4:-24037648 | Msa0157080:CDS |
| GAACACTGTACACAAAGCAA+TGG | 0.580622 | 1_4:-24033242 | Msa0157080:CDS |
| TTCCGTGGACAAAGCAGCTG+AGG | 0.588630 | 1_4:-24037633 | Msa0157080:CDS |
| AATATATGGACTGGTACCCC+TGG | 0.588784 | 1_4:-24037362 | Msa0157080:CDS |
| GTGGTAAATCAAGTTTACTT+CGG | 0.593011 | 1_4:-24035336 | Msa0157080:CDS |
| AGAGTCAAAATAGGGAATCA+CGG | 0.597474 | 1_4:+24035255 | None:intergenic |
| TAAAGGTAGAAAGGTAGGTG+AGG | 0.597978 | 1_4:-24037300 | Msa0157080:CDS |
| AAGCACTAGGCTCCTTTCGG+TGG | 0.602894 | 1_4:+24033408 | None:intergenic |
| TATTGGTTCAACATAGCAGA+AGG | 0.611717 | 1_4:-24035421 | Msa0157080:CDS |
| GAGGAACAGAGACTGCAAAA+GGG | 0.616780 | 1_4:-24033369 | Msa0157080:CDS |
| ATGGTTTACCACTACGAAGG+TGG | 0.620328 | 1_4:-24037276 | Msa0157080:CDS |
| TTGACAGGACCAAATGGTGG+TGG | 0.627465 | 1_4:-24035355 | Msa0157080:CDS |
| ATATTTCATCAACAAGCACT+AGG | 0.630455 | 1_4:+24033395 | None:intergenic |
| AAATCATTATCTGTATACAC+TGG | 0.633431 | 1_4:+24031837 | None:intergenic |
| GACGAAGTAATATCTCTGGA+TGG | 0.636880 | 1_4:-24037770 | Msa0157080:CDS |
| ATATAGCTGATGGTAAGCAT+CGG | 0.637167 | 1_4:-24031938 | Msa0157080:CDS |
| GTACCATGAAGCAAATGTCA+AGG | 0.637451 | 1_4:-24037130 | Msa0157080:CDS |
| ATGGACTGGTACCCCTGGAG+AGG | 0.642746 | 1_4:-24037357 | Msa0157080:CDS |
| GTTTACCACTACGAAGGTGG+AGG | 0.643110 | 1_4:-24037273 | Msa0157080:CDS |
| AAGCGTTATATGCTCATGTG+AGG | 0.646209 | 1_4:-24037008 | Msa0157080:intron |
| GATATGGAGTCTGTATGGAA+AGG | 0.648542 | 1_4:-24037692 | Msa0157080:CDS |
| TCTCAACTTAGAGCTCCTAA+GGG | 0.649001 | 1_4:-24037446 | Msa0157080:CDS |
| ACAGTGTTCTTGATGTTCAG+CGG | 0.649321 | 1_4:+24033256 | None:intergenic |
| CTATTGACAGGACCAAATGG+TGG | 0.654961 | 1_4:-24035358 | Msa0157080:CDS |
| AGCTGCAATTATGTTCACAT+CGG | 0.663628 | 1_4:-24031738 | Msa0157080:three_prime_UTR |
| TAAGAAACTCTACGTAGGAG+AGG | 0.665205 | 1_4:-24032738 | Msa0157080:intron |
| AGGAGCTCTAAGTTGAGACA+TGG | 0.668968 | 1_4:+24037451 | None:intergenic |
| TCATTGCTGGAACCACCGAA+AGG | 0.673113 | 1_4:-24033420 | Msa0157080:CDS |
| TTATCAGGAATTTCTCACGA+GGG | 0.673961 | 1_4:-24032968 | Msa0157080:CDS |
| TGGTTCAACATAGCAGAAGG+AGG | 0.676802 | 1_4:-24035418 | Msa0157080:CDS |
| TTTATCAGGAATTTCTCACG+AGG | 0.678520 | 1_4:-24032969 | Msa0157080:CDS |
| GGCGGCCTCCACCTTCGTAG+TGG | 0.679029 | 1_4:+24037268 | None:intergenic |
| TGAAGAGCCTATAGTCATCG+GGG | 0.687428 | 1_4:+24032787 | None:intergenic |
| ATGACAGACGGATAATCTCG+AGG | 0.699731 | 1_4:-24032102 | Msa0157080:intron |
| GAAGAGCCTATAGTCATCGG+GGG | 0.700325 | 1_4:+24032788 | None:intergenic |
| TTTGGTAATCACAAGCAATG+TGG | 0.717978 | 1_4:+24037029 | None:intergenic |
| CCCGGGAACAGGAAGCAGTG+TGG | 0.720310 | 1_4:-24037409 | Msa0157080:CDS |
| CCAGATAAGAAACTCTACGT+AGG | 0.723183 | 1_4:-24032743 | Msa0157080:CDS |
| GGAATGGTTTACCACTACGA+AGG | 0.726194 | 1_4:-24037279 | Msa0157080:CDS |
| CTTGTTGATGAAATATGCCG+AGG | 0.741296 | 1_4:-24033388 | Msa0157080:CDS |
| GTCAAAATAGGGAATCACGG+CGG | 0.796421 | 1_4:+24035258 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAAATTATGTGTTATTTT+TGG | - | chr1_4:24031903-24031922 | Msa0157080:exon | 10.0% |
| !!! | TGTTTTTTAAAAAATAAAAC+TGG | - | chr1_4:24034105-24034124 | Msa0157080:intron | 10.0% |
| !!! | TTGTGTATTTTTTTTTTTTT+TGG | - | chr1_4:24035714-24035733 | Msa0157080:intron | 10.0% |
| !! | ATTATCTTAAAGTTTATATA+AGG | - | chr1_4:24036275-24036294 | Msa0157080:intron | 10.0% |
| !!! | TTTTTGGATAAGAATTTTAT+TGG | - | chr1_4:24031919-24031938 | Msa0157080:CDS | 15.0% |
| !!! | ATAATGTTATATTTTTTTCC+AGG | - | chr1_4:24033514-24033533 | Msa0157080:intron | 15.0% |
| !! | ATATATGATTAAAATAGGAA+AGG | + | chr1_4:24034170-24034189 | None:intergenic | 15.0% |
| !! | TTTGCATATATGATTAAAAT+AGG | + | chr1_4:24034175-24034194 | None:intergenic | 15.0% |
| !! | AAAAACAATGATGTTTATAT+GGG | + | chr1_4:24034286-24034305 | None:intergenic | 15.0% |
| !! | AAAAAACAATGATGTTTATA+TGG | + | chr1_4:24034287-24034306 | None:intergenic | 15.0% |
| !!! | TTATGAATTTTTCAATATGT+TGG | - | chr1_4:24034491-24034510 | Msa0157080:intron | 15.0% |
| !!! | CAATTTTTAAGATAAACAAA+TGG | + | chr1_4:24034609-24034628 | None:intergenic | 15.0% |
| !! | CATTTGTTTATCTTAAAAAT+TGG | - | chr1_4:24034607-24034626 | Msa0157080:intron | 15.0% |
| !!! | GTATTTTTTTTTTTTTTGGA+AGG | - | chr1_4:24035718-24035737 | Msa0157080:intron | 15.0% |
| !! | TTGGTTATTATTATGATATT+TGG | + | chr1_4:24036343-24036362 | None:intergenic | 15.0% |
| !!! | GAATTATTTTATTGTTTCTT+GGG | + | chr1_4:24036415-24036434 | None:intergenic | 15.0% |
| !! | AAACAATAAAATAATTCCAA+AGG | - | chr1_4:24036418-24036437 | Msa0157080:intron | 15.0% |
| !! | AACAATAAAATAATTCCAAA+GGG | - | chr1_4:24036419-24036438 | Msa0157080:intron | 15.0% |
| !!! | TCTTTTTGTTTTATCAAAAT+TGG | + | chr1_4:24037026-24037045 | None:intergenic | 15.0% |
| !! | TTAATAACTTAAACAGTATA+TGG | - | chr1_4:24037395-24037414 | Msa0157080:CDS | 15.0% |
| !!! | TTTTACTCACAATATTATTT+TGG | - | chr1_4:24039479-24039498 | Msa0157080:intron | 15.0% |
| !!! | ACTAAATTTTTCTACATAGA+TGG | - | chr1_4:24031653-24031672 | Msa0157080:three_prime_UTR | 20.0% |
| !! | TGTTAAATTGAAAAAAGTGA+TGG | - | chr1_4:24032177-24032196 | Msa0157080:intron | 20.0% |
| !! | AGCTATAATTTCTCATATAT+AGG | - | chr1_4:24032585-24032604 | Msa0157080:intron | 20.0% |
| !! | AATATATGATCTTACATTCT+CGG | + | chr1_4:24032711-24032730 | None:intergenic | 20.0% |
| !! | TTTATATCCTAAATTTCTTG+TGG | + | chr1_4:24033101-24033120 | None:intergenic | 20.0% |
| !! | TAGTATTGTGATAATATGTT+TGG | + | chr1_4:24033368-24033387 | None:intergenic | 20.0% |
| !!! | GATTTTATGTATTTTAAAGC+TGG | - | chr1_4:24033396-24033415 | Msa0157080:CDS | 20.0% |
| !! | AACACTTTATACCAAATATA+TGG | - | chr1_4:24033963-24033982 | Msa0157080:intron | 20.0% |
| !! | TTGATTGAAAAATGTGTTTA+TGG | - | chr1_4:24034532-24034551 | Msa0157080:intron | 20.0% |
| !! | TGATTGAAAAATGTGTTTAT+GGG | - | chr1_4:24034533-24034552 | Msa0157080:intron | 20.0% |
| !!! | TTATAGTATTGGCTTATTTA+TGG | - | chr1_4:24034676-24034695 | Msa0157080:intron | 20.0% |
| !! | TATAAAAACTTGATGTGTTA+TGG | - | chr1_4:24035052-24035071 | Msa0157080:intron | 20.0% |
| !! | ATAAAAACTTGATGTGTTAT+GGG | - | chr1_4:24035053-24035072 | Msa0157080:intron | 20.0% |
| !!! | GGAATTATTTTATTGTTTCT+TGG | + | chr1_4:24036416-24036435 | None:intergenic | 20.0% |
| !!! | ACTTTCACCAATTTTAAAAA+GGG | - | chr1_4:24036815-24036834 | Msa0157080:intron | 20.0% |
| !! | TAGTAAAAAATGTATGTTTG+TGG | - | chr1_4:24037224-24037243 | Msa0157080:intron | 20.0% |
| !!! | ATGTACTATTAAAGTATTCA+CGG | - | chr1_4:24037681-24037700 | Msa0157080:CDS | 20.0% |
| !!! | ATAATTGTTGATTCTAGTTT+TGG | + | chr1_4:24037727-24037746 | None:intergenic | 20.0% |
| !! | TAAGAAGGATAAAATGTTTA+AGG | + | chr1_4:24037861-24037880 | None:intergenic | 20.0% |
| !! | ATCAATGGTAATAATTCTAA+TGG | - | chr1_4:24038326-24038345 | Msa0157080:intron | 20.0% |
| !! | TCAATGGTAATAATTCTAAT+GGG | - | chr1_4:24038327-24038346 | Msa0157080:intron | 20.0% |
| !!! | AATTCCTGATAAAAACTTTT+CGG | + | chr1_4:24038363-24038382 | None:intergenic | 20.0% |
| !! | AATTGATAAAAAGAATGAGT+TGG | + | chr1_4:24038751-24038770 | None:intergenic | 20.0% |
| !!! | TAGGATTATTTTTTTATGTG+AGG | + | chr1_4:24038783-24038802 | None:intergenic | 20.0% |
| !!! | GACTAAAAACAATTGTTATT+AGG | + | chr1_4:24038870-24038889 | None:intergenic | 20.0% |
| !!! | TAATCTTGATTTTATTGACA+AGG | - | chr1_4:24039144-24039163 | Msa0157080:intron | 20.0% |
| !! | AAATGATAAACATTCCAAAA+AGG | + | chr1_4:24039191-24039210 | None:intergenic | 20.0% |
| !!! | AGTTTTTACTGATGAAATTT+AGG | - | chr1_4:24039538-24039557 | Msa0157080:intron | 20.0% |
| !! | GAAATTATTGTATGTTGTAT+TGG | - | chr1_4:24039632-24039651 | Msa0157080:intron | 20.0% |
| !! | TTGTAAGTACATATATTAGT+TGG | - | chr1_4:24039656-24039675 | Msa0157080:intron | 20.0% |
| ! | TAAGTTTAGAAGCCTATAAA+AGG | + | chr1_4:24031609-24031628 | None:intergenic | 25.0% |
| !!! | TATAGATCATGTGTTATTTC+TGG | + | chr1_4:24031871-24031890 | None:intergenic | 25.0% |
| !!! | TTCTTGCACATTTTTTGATT+TGG | - | chr1_4:24032057-24032076 | Msa0157080:CDS | 25.0% |
| ! | CATTATAATACGATGATCTA+TGG | - | chr1_4:24032080-24032099 | Msa0157080:CDS | 25.0% |
| !!! | AATTATAGCTTTGAGTTACA+AGG | + | chr1_4:24032575-24032594 | None:intergenic | 25.0% |
| ! | NTGAAATATTTACTATGAGC+AGG | + | chr1_4:24032817-24032836 | None:intergenic | 25.0% |
| ! | TTGGAATATTATTCAATTCC+AGG | - | chr1_4:24033008-24033027 | Msa0157080:CDS | 25.0% |
| ! | TTGTTATGTATAATAACACC+TGG | + | chr1_4:24033029-24033048 | None:intergenic | 25.0% |
| ! | ATATCGTCAAAAAATTCATC+AGG | + | chr1_4:24033632-24033651 | None:intergenic | 25.0% |
| !!! | TGATGAATTTTTTGACGATA+TGG | - | chr1_4:24033631-24033650 | Msa0157080:intron | 25.0% |
| !!! | AGCTTTTATTCTAGAAACTA+CGG | + | chr1_4:24033867-24033886 | None:intergenic | 25.0% |
| ! | TTTATACCAAATATATGGAC+TGG | - | chr1_4:24033968-24033987 | Msa0157080:intron | 25.0% |
| !! | AAACATGCTTTAGATTCTAA+AGG | - | chr1_4:24034022-24034041 | Msa0157080:intron | 25.0% |
| !! | TTTAGATTCTAAAGGTAGAA+AGG | - | chr1_4:24034030-24034049 | Msa0157080:intron | 25.0% |
| ! | TTAAAAAACACACCTTGATA+AGG | + | chr1_4:24034095-24034114 | None:intergenic | 25.0% |
| ! | TATGCAAAACAATTTGTCAT+AGG | - | chr1_4:24034187-24034206 | Msa0157080:intron | 25.0% |
| !!! | TAGAGTTTTGGAACTTTTAA+GGG | - | chr1_4:24034239-24034258 | Msa0157080:intron | 25.0% |
| !! | CAATAGTGATTTCACAATTT+TGG | + | chr1_4:24034642-24034661 | None:intergenic | 25.0% |
| !!! | CAGTGATAGTTTTATAGTAT+TGG | - | chr1_4:24034665-24034684 | Msa0157080:intron | 25.0% |
| ! | TAATTAGCATAAAACATGCA+AGG | + | chr1_4:24034948-24034967 | None:intergenic | 25.0% |
| ! | TAAAAACTTGATGTGTTATG+GGG | - | chr1_4:24035054-24035073 | Msa0157080:intron | 25.0% |
| ! | GAATATCCTAGAATATTCAA+CGG | + | chr1_4:24035132-24035151 | None:intergenic | 25.0% |
| !!! | TGTTTTGAAGCTATGTATTT+AGG | - | chr1_4:24035679-24035698 | Msa0157080:intron | 25.0% |
| !!! | GTTTTGAAGCTATGTATTTA+GGG | - | chr1_4:24035680-24035699 | Msa0157080:intron | 25.0% |
| !!! | TTTTGAAGCTATGTATTTAG+GGG | - | chr1_4:24035681-24035700 | Msa0157080:intron | 25.0% |
| ! | AATAAAGAACAGCTAGTAAA+TGG | + | chr1_4:24035786-24035805 | None:intergenic | 25.0% |
| !! | TAGTTGGTTTATTACCATAT+TGG | - | chr1_4:24035901-24035920 | Msa0157080:intron | 25.0% |
| !!! | CAATCATTATTTCTATTGAC+AGG | - | chr1_4:24035969-24035988 | Msa0157080:intron | 25.0% |
| ! | CCAACTATAGATGAATTTAA+GGG | + | chr1_4:24036190-24036209 | None:intergenic | 25.0% |
| ! | TCCAACTATAGATGAATTTA+AGG | + | chr1_4:24036191-24036210 | None:intergenic | 25.0% |
| ! | ATTGCTTCATTGTCTATATA+AGG | - | chr1_4:24036226-24036245 | Msa0157080:intron | 25.0% |
| !!! | TTTTGATGTTTGGCTTTATT+TGG | + | chr1_4:24036313-24036332 | None:intergenic | 25.0% |
| !!! | TGGTTTGTTATTTTGATGTT+TGG | + | chr1_4:24036323-24036342 | None:intergenic | 25.0% |
| !! | GATTATCTGAAACTCTTAAT+AGG | + | chr1_4:24036367-24036386 | None:intergenic | 25.0% |
| !! | TTATTGTTTCTTGGGATTTA+AGG | + | chr1_4:24036407-24036426 | None:intergenic | 25.0% |
| ! | ATAAAATAATTCCAAAGGGT+TGG | - | chr1_4:24036423-24036442 | Msa0157080:intron | 25.0% |
| ! | AATATCATATGCCTTAATTG+CGG | + | chr1_4:24036449-24036468 | None:intergenic | 25.0% |
| !! | AGTGAAACTTTTTGCTTAAA+TGG | - | chr1_4:24036478-24036497 | Msa0157080:intron | 25.0% |
| !! | TTTTTGCTTAAATGGATAGT+TGG | - | chr1_4:24036486-24036505 | Msa0157080:intron | 25.0% |
| !!! | AGATTTTCATTTTTCATCTC+AGG | - | chr1_4:24036716-24036735 | Msa0157080:intron | 25.0% |
| !! | TAGAGTCATACATTTTATAG+CGG | + | chr1_4:24036754-24036773 | None:intergenic | 25.0% |
| !!! | GACTTTCACCAATTTTAAAA+AGG | - | chr1_4:24036814-24036833 | Msa0157080:intron | 25.0% |
| !! | TAAGTTATTAATTGCTGGTT+TGG | + | chr1_4:24037386-24037405 | None:intergenic | 25.0% |
| !! | CTGTTTAAGTTATTAATTGC+TGG | + | chr1_4:24037391-24037410 | None:intergenic | 25.0% |
| !! | AGAATTTGATATTTTGTGCT+TGG | - | chr1_4:24037512-24037531 | Msa0157080:intron | 25.0% |
| !! | TGTACTATTAAAGTATTCAC+GGG | - | chr1_4:24037682-24037701 | Msa0157080:CDS | 25.0% |
| ! | AACAGACAACATATAGTATT+CGG | + | chr1_4:24037816-24037835 | None:intergenic | 25.0% |
| !! | CATTTTATCCTTCTTAACAT+CGG | - | chr1_4:24037865-24037884 | Msa0157080:intron | 25.0% |
| !!! | TTTTTAGTCAAAACCTCTAT+AGG | - | chr1_4:24038881-24038900 | Msa0157080:intron | 25.0% |
| ! | AAATCATTATCTGTATACAC+TGG | + | chr1_4:24039505-24039524 | None:intergenic | 25.0% |
| ! | GGTAAGCATATACCTTTTAT+AGG | - | chr1_4:24031594-24031613 | Msa0157080:three_prime_UTR | 30.0% |
| TATAAGAATCCAGTTAGACA+TGG | + | chr1_4:24032306-24032325 | None:intergenic | 30.0% | |
| GATGATAGAAAAAACACATC+AGG | + | chr1_4:24032521-24032540 | None:intergenic | 30.0% | |
| ATATAGGATTCCCATCATAA+CGG | - | chr1_4:24032601-24032620 | Msa0157080:intron | 30.0% | |
| ACCTATCATTTGTCTGTATT+TGG | - | chr1_4:24032754-24032773 | Msa0157080:CDS | 30.0% | |
| ACCAAATACAGACAAATGAT+AGG | + | chr1_4:24032758-24032777 | None:intergenic | 30.0% | |
| ATCATGTTGTGTTAACTTTC+TGG | + | chr1_4:24032948-24032967 | None:intergenic | 30.0% | |
| ATCTGAATATTGCATAACGA+AGG | - | chr1_4:24032973-24032992 | Msa0157080:CDS | 30.0% | |
| ATTCTTGTTCTTCGTGAATT+TGG | + | chr1_4:24033066-24033085 | None:intergenic | 30.0% | |
| GTTTACACCACAAGAAATTT+AGG | - | chr1_4:24033091-24033110 | Msa0157080:CDS | 30.0% | |
| TGTATGTGATGAATGATCAA+CGG | + | chr1_4:24033162-24033181 | None:intergenic | 30.0% | |
| CAACTAATTCATCACTAACT+TGG | - | chr1_4:24033222-24033241 | Msa0157080:CDS | 30.0% | |
| !!! | TATATTTTTTTCCAGGTTGC+TGG | - | chr1_4:24033521-24033540 | Msa0157080:intron | 30.0% |
| AAGTAAGCACATCATTTATG+TGG | + | chr1_4:24033688-24033707 | None:intergenic | 30.0% | |
| !! | CTTAACTTGCAAATAGCTAT+AGG | + | chr1_4:24033771-24033790 | None:intergenic | 30.0% |
| TATTGTCCCAAAAATCTTTC+AGG | - | chr1_4:24033823-24033842 | Msa0157080:intron | 30.0% | |
| !! | GCTTTTATTCTAGAAACTAC+GGG | + | chr1_4:24033866-24033885 | None:intergenic | 30.0% |
| GAATAAGATATTTCTCCCTT+AGG | + | chr1_4:24033911-24033930 | None:intergenic | 30.0% | |
| !!! | CTAGAGTTTTGGAACTTTTA+AGG | - | chr1_4:24034238-24034257 | Msa0157080:intron | 30.0% |
| !!! | AGAGTTTTGGAACTTTTAAG+GGG | - | chr1_4:24034240-24034259 | Msa0157080:intron | 30.0% |
| AAATAAAGCAGAAGCAACAA+AGG | + | chr1_4:24034368-24034387 | None:intergenic | 30.0% | |
| !!! | TTGCTTCTGCTTTATTTTTG+TGG | - | chr1_4:24034371-24034390 | Msa0157080:intron | 30.0% |
| !!! | TTCTGCTTTATTTTTGTGGA+TGG | - | chr1_4:24034375-24034394 | Msa0157080:intron | 30.0% |
| AAAATCATCAATACACTGCA+AGG | + | chr1_4:24034408-24034427 | None:intergenic | 30.0% | |
| AAGATCAATCAAATCCAAAG+AGG | + | chr1_4:24034438-24034457 | None:intergenic | 30.0% | |
| TCTTGAAATCTTGTCAATGA+TGG | - | chr1_4:24034558-24034577 | Msa0157080:intron | 30.0% | |
| ACAAATGGAGCAAAATACTA+TGG | + | chr1_4:24034594-24034613 | None:intergenic | 30.0% | |
| ! | TGGAAGTATGATTGAATTTG+TGG | + | chr1_4:24034771-24034790 | None:intergenic | 30.0% |
| AATCATACTTCCACATTTCA+AGG | - | chr1_4:24034778-24034797 | Msa0157080:intron | 30.0% | |
| ! | GCAATATTTTCCTTGAAATG+TGG | + | chr1_4:24034791-24034810 | None:intergenic | 30.0% |
| !! | GAAATCATCACTTTTCTCTT+TGG | - | chr1_4:24034920-24034939 | Msa0157080:intron | 30.0% |
| ATATACTACCTCAAACTTCT+GGG | + | chr1_4:24035035-24035054 | None:intergenic | 30.0% | |
| TATATACTACCTCAAACTTC+TGG | + | chr1_4:24035036-24035055 | None:intergenic | 30.0% | |
| TGCCTTTATTATGTAACCAA+TGG | - | chr1_4:24035255-24035274 | Msa0157080:CDS | 30.0% | |
| ! | GACCATTGGTTACATAATAA+AGG | + | chr1_4:24035260-24035279 | None:intergenic | 30.0% |
| ! | ATTTAAACTTTTGTCTCCTG+AGG | + | chr1_4:24035319-24035338 | None:intergenic | 30.0% |
| ACAAAAGTTTAAATCCCCTA+GGG | - | chr1_4:24035325-24035344 | Msa0157080:CDS | 30.0% | |
| TAAATAGAACTCAATCTGAC+AGG | + | chr1_4:24035438-24035457 | None:intergenic | 30.0% | |
| CTACAATTCTTTACAGAAAG+AGG | + | chr1_4:24035616-24035635 | None:intergenic | 30.0% | |
| ! | CTTCATCTTGCGATTTTTAT+CGG | + | chr1_4:24035880-24035899 | None:intergenic | 30.0% |
| GTGGTAAATCAAGTTTACTT+CGG | - | chr1_4:24036003-24036022 | Msa0157080:intron | 30.0% | |
| AGCATGATAGAGTCAAAATA+GGG | + | chr1_4:24036095-24036114 | None:intergenic | 30.0% | |
| AAGCATGATAGAGTCAAAAT+AGG | + | chr1_4:24036096-24036115 | None:intergenic | 30.0% | |
| TGATCACAAAAGTTCATTTC+AGG | - | chr1_4:24036142-24036161 | Msa0157080:intron | 30.0% | |
| CCCTTAAATTCATCTATAGT+TGG | - | chr1_4:24036187-24036206 | Msa0157080:intron | 30.0% | |
| ! | TCTGAAACTCTTAATAGGAT+TGG | + | chr1_4:24036362-24036381 | None:intergenic | 30.0% |
| ! | TCACTAGCTTCTTACAAATA+TGG | + | chr1_4:24036547-24036566 | None:intergenic | 30.0% |
| AAAATTGGTGAAAGTCTTGA+GGG | + | chr1_4:24037011-24037030 | None:intergenic | 30.0% | |
| GAACATGTGTTTATAAGTGT+TGG | - | chr1_4:24037282-24037301 | Msa0157080:CDS | 30.0% | |
| ! | CACTCTTAGAATTTTCAGTT+AGG | + | chr1_4:24037353-24037372 | None:intergenic | 30.0% |
| GTAACAAGAGAAAAAGAGTA+CGG | - | chr1_4:24037417-24037436 | Msa0157080:CDS | 30.0% | |
| CTGATATGGTGATATTAGAA+GGG | + | chr1_4:24037609-24037628 | None:intergenic | 30.0% | |
| TCTGATATGGTGATATTAGA+AGG | + | chr1_4:24037610-24037629 | None:intergenic | 30.0% | |
| ACTATAACAGAGGAATGAAA+AGG | + | chr1_4:24037647-24037666 | None:intergenic | 30.0% | |
| ! | GTACTATTAAAGTATTCACG+GGG | - | chr1_4:24037683-24037702 | Msa0157080:CDS | 30.0% |
| !! | AATAGTTGTCTGTTGCTTTA+TGG | - | chr1_4:24037784-24037803 | Msa0157080:CDS | 30.0% |
| ACAGACAACATATAGTATTC+GGG | + | chr1_4:24037815-24037834 | None:intergenic | 30.0% | |
| ATATTTCATCAACAAGCACT+AGG | + | chr1_4:24037947-24037966 | None:intergenic | 30.0% | |
| ATTGAAACTCTTGATAGAAG+TGG | - | chr1_4:24038014-24038033 | Msa0157080:intron | 30.0% | |
| GAATTGTCTAGTTACATCAA+TGG | - | chr1_4:24038311-24038330 | Msa0157080:intron | 30.0% | |
| ! | CATTCCGAAAAGTTTTTATC+AGG | - | chr1_4:24038356-24038375 | Msa0157080:intron | 30.0% |
| TCCAATTGAAGTTTCACATA+AGG | - | chr1_4:24038409-24038428 | Msa0157080:intron | 30.0% | |
| TCCTTATGTGAAACTTCAAT+TGG | + | chr1_4:24038413-24038432 | None:intergenic | 30.0% | |
| AATTGAAGTTTCACATAAGG+AGG | - | chr1_4:24038412-24038431 | Msa0157080:intron | 30.0% | |
| ! | ATTTTATAGCAGAACTCCAA+AGG | - | chr1_4:24038465-24038484 | Msa0157080:intron | 30.0% |
| AGTGTTTCTTAATTGACACT+AGG | - | chr1_4:24038519-24038538 | Msa0157080:intron | 30.0% | |
| GTGTTTCTTAATTGACACTA+GGG | - | chr1_4:24038520-24038539 | Msa0157080:intron | 30.0% | |
| ACTTCACTTACCTATGTTAA+AGG | - | chr1_4:24038683-24038702 | Msa0157080:intron | 30.0% | |
| CTTCACTTACCTATGTTAAA+GGG | - | chr1_4:24038684-24038703 | Msa0157080:intron | 30.0% | |
| ACTTCAGATTTGTAAACCTT+AGG | - | chr1_4:24038954-24038973 | Msa0157080:intron | 30.0% | |
| CATGATATTAGAAGTTCCTA+AGG | + | chr1_4:24038973-24038992 | None:intergenic | 30.0% | |
| ATCGACAGTTCATTTATCTT+TGG | - | chr1_4:24039064-24039083 | Msa0157080:intron | 30.0% | |
| TCGACAGTTCATTTATCTTT+GGG | - | chr1_4:24039065-24039084 | Msa0157080:intron | 30.0% | |
| GTCATGACAAATAAAATGCA+GGG | + | chr1_4:24039111-24039130 | None:intergenic | 30.0% | |
| AGTCATGACAAATAAAATGC+AGG | + | chr1_4:24039112-24039131 | None:intergenic | 30.0% | |
| ! | GATTTTATACTGTGCCTTTT+TGG | - | chr1_4:24039174-24039193 | Msa0157080:intron | 30.0% |
| ! | TGATTGATTTCATTCTGTGA+TGG | - | chr1_4:24039210-24039229 | Msa0157080:intron | 30.0% |
| TGATTAGCAGAGTTTCTATT+TGG | + | chr1_4:24039348-24039367 | None:intergenic | 30.0% | |
| GTTGGTATTCTATTCCTTAA+AGG | - | chr1_4:24039674-24039693 | Msa0157080:intron | 30.0% | |
| ! | TCCTTAAAGGTTGTCTTTTA+TGG | - | chr1_4:24039687-24039706 | Msa0157080:intron | 30.0% |
| TCCATAAAAGACAACCTTTA+AGG | + | chr1_4:24039691-24039710 | None:intergenic | 30.0% | |
| !!! | ATATGCCTGTTTTAGTATGT+TGG | + | chr1_4:24039727-24039746 | None:intergenic | 30.0% |
| TCTAGATGAGTATAGAAGCT+TGG | + | chr1_4:24031816-24031835 | None:intergenic | 35.0% | |
| GATCTATGGTACCTTTAACA+TGG | - | chr1_4:24032094-24032113 | Msa0157080:CDS | 35.0% | |
| ! | CAAATCTACGTCAAAGTGTT+GGG | + | chr1_4:24032149-24032168 | None:intergenic | 35.0% |
| AAAGGAAGGAATTGTGGAAT+TGG | + | chr1_4:24032236-24032255 | None:intergenic | 35.0% | |
| TCTTACAAAGGAAGGAATTG+TGG | + | chr1_4:24032242-24032261 | None:intergenic | 35.0% | |
| CTTTCTCAGAGATCTTACAA+AGG | + | chr1_4:24032254-24032273 | None:intergenic | 35.0% | |
| ! | CATGTGTCTATCAAGTTGTT+TGG | + | chr1_4:24032415-24032434 | None:intergenic | 35.0% |
| TGACAGTAGATGTTTCATAG+AGG | - | chr1_4:24032457-24032476 | Msa0157080:intron | 35.0% | |
| TCAGGATATGTGTTCATGTT+GGG | + | chr1_4:24032503-24032522 | None:intergenic | 35.0% | |
| ATCAGGATATGTGTTCATGT+TGG | + | chr1_4:24032504-24032523 | None:intergenic | 35.0% | |
| !! | ATAGCTTTGAGTTACAAGGA+TGG | + | chr1_4:24032571-24032590 | None:intergenic | 35.0% |
| AATCATCAGGTATCTCAAAG+GGG | + | chr1_4:24032627-24032646 | None:intergenic | 35.0% | |
| GAATCATCAGGTATCTCAAA+GGG | + | chr1_4:24032628-24032647 | None:intergenic | 35.0% | |
| AGAATCATCAGGTATCTCAA+AGG | + | chr1_4:24032629-24032648 | None:intergenic | 35.0% | |
| TTGTTGTCAAGAGAATCATC+AGG | + | chr1_4:24032640-24032659 | None:intergenic | 35.0% | |
| TGATTCTCTTGACAACAACT+AGG | - | chr1_4:24032642-24032661 | Msa0157080:intron | 35.0% | |
| ATGTCTCATTGCTAGATACA+TGG | + | chr1_4:24032687-24032706 | None:intergenic | 35.0% | |
| ! | ACGAAGGAAGAAAAGTCTTT+TGG | - | chr1_4:24032989-24033008 | Msa0157080:CDS | 35.0% |
| TTAGTTGTGAGTCATACCAA+TGG | + | chr1_4:24033209-24033228 | None:intergenic | 35.0% | |
| AACCAGGTCAAACTTAATCT+AGG | - | chr1_4:24033332-24033351 | Msa0157080:CDS | 35.0% | |
| ATCCTAGATTAAGTTTGACC+TGG | + | chr1_4:24033337-24033356 | None:intergenic | 35.0% | |
| TGTGATAATATGTTTGGCCA+GGG | + | chr1_4:24033362-24033381 | None:intergenic | 35.0% | |
| TTGTGATAATATGTTTGGCC+AGG | + | chr1_4:24033363-24033382 | None:intergenic | 35.0% | |
| TTCTTCAGTCATTTCATTCC+TGG | - | chr1_4:24033449-24033468 | Msa0157080:intron | 35.0% | |
| TTACATTCCAATGCAACTTG+AGG | + | chr1_4:24033487-24033506 | None:intergenic | 35.0% | |
| GATTGACGAAGTAATATCTC+TGG | - | chr1_4:24033565-24033584 | Msa0157080:intron | 35.0% | |
| ! | CAGTGACCTGAAAGATTTTT+GGG | + | chr1_4:24033832-24033851 | None:intergenic | 35.0% |
| ! | TCAGTGACCTGAAAGATTTT+TGG | + | chr1_4:24033833-24033852 | None:intergenic | 35.0% |
| AGGGAGAAATATCTTATTCC+CGG | - | chr1_4:24033912-24033931 | Msa0157080:intron | 35.0% | |
| !! | TTTAATTTGTTCCTCTCCAG+GGG | + | chr1_4:24033996-24034015 | None:intergenic | 35.0% |
| !! | GTTTAATTTGTTCCTCTCCA+GGG | + | chr1_4:24033997-24034016 | None:intergenic | 35.0% |
| !! | TGTTTAATTTGTTCCTCTCC+AGG | + | chr1_4:24033998-24034017 | None:intergenic | 35.0% |
| ! | GATTCTAAAGGTAGAAAGGT+AGG | - | chr1_4:24034034-24034053 | Msa0157080:intron | 35.0% |
| AAAAACACACCTTGATAAGG+CGG | + | chr1_4:24034092-24034111 | None:intergenic | 35.0% | |
| ! | TTTGGTAATCACAAGCAATG+TGG | + | chr1_4:24034313-24034332 | None:intergenic | 35.0% |
| ! | TGATTTTCACCTAACCTCTT+TGG | - | chr1_4:24034421-24034440 | Msa0157080:intron | 35.0% |
| CAATCAAATCCAAAGAGGTT+AGG | + | chr1_4:24034433-24034452 | None:intergenic | 35.0% | |
| GCATTAGTGGTCAAATTTCT+TGG | - | chr1_4:24034709-24034728 | Msa0157080:intron | 35.0% | |
| !! | ATTCCACTGTGTTTTGAACT+GGG | - | chr1_4:24034866-24034885 | Msa0157080:intron | 35.0% |
| !! | TTCTGGGATTCTACTATTGT+AGG | + | chr1_4:24035019-24035038 | None:intergenic | 35.0% |
| ATGCTTCCGTTGAATATTCT+AGG | - | chr1_4:24035123-24035142 | Msa0157080:intron | 35.0% | |
| ! | ATAAAGGCATAAGAAGATGC+AGG | + | chr1_4:24035244-24035263 | None:intergenic | 35.0% |
| GACAAAAGTTTAAATCCCCT+AGG | - | chr1_4:24035324-24035343 | Msa0157080:CDS | 35.0% | |
| !! | AGTAGTGCTGAATTTGGTTT+TGG | - | chr1_4:24035398-24035417 | Msa0157080:CDS | 35.0% |
| GAGTTCTATTTACCACACAA+AGG | - | chr1_4:24035446-24035465 | Msa0157080:CDS | 35.0% | |
| CAAACTATTGATCCTTTGTG+TGG | + | chr1_4:24035461-24035480 | None:intergenic | 35.0% | |
| ! | CAAAGGATCAATAGTTTGCA+TGG | - | chr1_4:24035463-24035482 | Msa0157080:CDS | 35.0% |
| CATCTCTCTATATCATCAGA+TGG | + | chr1_4:24035512-24035531 | None:intergenic | 35.0% | |
| CTGTGAAGTATGAAGAACAT+TGG | + | chr1_4:24035535-24035554 | None:intergenic | 35.0% | |
| TTCTTCATACTTCACAGCAA+TGG | - | chr1_4:24035538-24035557 | Msa0157080:intron | 35.0% | |
| ! | CTAAGTGTTTTCTTCCATGA+GGG | - | chr1_4:24035636-24035655 | Msa0157080:intron | 35.0% |
| ! | ATCTTGCGATTTTTATCGGA+TGG | + | chr1_4:24035876-24035895 | None:intergenic | 35.0% |
| AATCGCAAGATGAAGATAGT+TGG | - | chr1_4:24035885-24035904 | Msa0157080:intron | 35.0% | |
| TCTGCTATGTTGAACCAATA+TGG | + | chr1_4:24035918-24035937 | None:intergenic | 35.0% | |
| !! | TATTGGTTCAACATAGCAGA+AGG | - | chr1_4:24035918-24035937 | Msa0157080:intron | 35.0% |
| TTTCTATTGACAGGACCAAA+TGG | - | chr1_4:24035978-24035997 | Msa0157080:intron | 35.0% | |
| AGAGTCAAAATAGGGAATCA+CGG | + | chr1_4:24036087-24036106 | None:intergenic | 35.0% | |
| ! | AATGAACTTTTGTGATCAGC+TGG | + | chr1_4:24036140-24036159 | None:intergenic | 35.0% |
| !! | GGCTTTATTTGGTCGATATA+TGG | + | chr1_4:24036302-24036321 | None:intergenic | 35.0% |
| CTAGCTTCTTACAAATATGG+TGG | + | chr1_4:24036544-24036563 | None:intergenic | 35.0% | |
| !! | CAATTTTAAAAAGGGCAACC+CGG | - | chr1_4:24036823-24036842 | Msa0157080:intron | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr1_4:24036915-24036934 | None:intergenic | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr1_4:24036914-24036933 | Msa0157080:intron | 35.0% |
| AAATTGGTGAAAGTCTTGAG+GGG | + | chr1_4:24037010-24037029 | None:intergenic | 35.0% | |
| CAAAATTGGTGAAAGTCTTG+AGG | + | chr1_4:24037012-24037031 | None:intergenic | 35.0% | |
| GGAAGATCACACAATTAAGA+GGG | - | chr1_4:24037121-24037140 | Msa0157080:CDS | 35.0% | |
| ACCTAAGGACATAGAATAGT+GGG | + | chr1_4:24037163-24037182 | None:intergenic | 35.0% | |
| AACCTAAGGACATAGAATAG+TGG | + | chr1_4:24037164-24037183 | None:intergenic | 35.0% | |
| GAACAAGCTTGATAAACCTA+AGG | + | chr1_4:24037178-24037197 | None:intergenic | 35.0% | |
| ! | TTTATCAAGCTTGTTCTCGT+AGG | - | chr1_4:24037182-24037201 | Msa0157080:intron | 35.0% |
| !! | CATGTGTTTATAAGTGTTGG+AGG | - | chr1_4:24037285-24037304 | Msa0157080:CDS | 35.0% |
| CTAACTCAACCTTACAAAAC+CGG | + | chr1_4:24037329-24037348 | None:intergenic | 35.0% | |
| ATATGGTGATATTAGAAGGG+AGG | + | chr1_4:24037606-24037625 | None:intergenic | 35.0% | |
| ! | TATTAAAGTATTCACGGGGA+AGG | - | chr1_4:24037687-24037706 | Msa0157080:CDS | 35.0% |
| ! | ATTAAAGTATTCACGGGGAA+GGG | - | chr1_4:24037688-24037707 | Msa0157080:CDS | 35.0% |
| CAGACAACATATAGTATTCG+GGG | + | chr1_4:24037814-24037833 | None:intergenic | 35.0% | |
| AACACTGTACACAAAGCAAT+GGG | - | chr1_4:24038098-24038117 | Msa0157080:intron | 35.0% | |
| ATGGACAAACAAAACCTACT+TGG | - | chr1_4:24038135-24038154 | Msa0157080:intron | 35.0% | |
| GATAAAGATCTTCAGCTCTT+TGG | + | chr1_4:24038238-24038257 | None:intergenic | 35.0% | |
| TGCAGAAAACTATGCAAAAC+AGG | - | chr1_4:24038286-24038305 | Msa0157080:intron | 35.0% | |
| TTTATCAGGAATTTCTCACG+AGG | - | chr1_4:24038370-24038389 | Msa0157080:intron | 35.0% | |
| TTATCAGGAATTTCTCACGA+GGG | - | chr1_4:24038371-24038390 | Msa0157080:intron | 35.0% | |
| GGAGTTCTGCTATAAAATCT+TGG | + | chr1_4:24038463-24038482 | None:intergenic | 35.0% | |
| TCTTAATTGACACTAGGGAA+TGG | - | chr1_4:24038525-24038544 | Msa0157080:intron | 35.0% | |
| !! | AATCCTAATACCTCTAGAAC+AGG | - | chr1_4:24038796-24038815 | Msa0157080:intron | 35.0% |
| AGTTTAATTGCCTGTTCTAG+AGG | + | chr1_4:24038809-24038828 | None:intergenic | 35.0% | |
| ! | TCTAGAACAGGCAATTAAAC+TGG | - | chr1_4:24038808-24038827 | Msa0157080:intron | 35.0% |
| ! | AATTGGTTCAGTACCTTGTT+GGG | - | chr1_4:24038841-24038860 | Msa0157080:intron | 35.0% |
| TAATTCACATAGATGCTGCT+TGG | + | chr1_4:24038920-24038939 | None:intergenic | 35.0% | |
| ATCTCACTTGACAAGTCATT+TGG | - | chr1_4:24039006-24039025 | Msa0157080:intron | 35.0% | |
| GACAAATAAAATGCAGGGAA+AGG | + | chr1_4:24039106-24039125 | None:intergenic | 35.0% | |
| ! | TTCCTTTATTTCCTAGTTCC+AGG | - | chr1_4:24039307-24039326 | Msa0157080:intron | 35.0% |
| TTCCTGGAACTAGGAAATAA+AGG | + | chr1_4:24039312-24039331 | None:intergenic | 35.0% | |
| CATCAGCTATATTGCTTAAC+AGG | + | chr1_4:24039393-24039412 | None:intergenic | 35.0% | |
| CTGTTAAGCAATATAGCTGA+TGG | - | chr1_4:24039391-24039410 | Msa0157080:intron | 35.0% | |
| ATATAGCTGATGGTAAGCAT+CGG | - | chr1_4:24039401-24039420 | Msa0157080:intron | 35.0% | |
| AGCTGCAATTATGTTCACAT+CGG | - | chr1_4:24039601-24039620 | Msa0157080:intron | 35.0% | |
| TTTAGTATGTTGGATGGGAA+GGG | + | chr1_4:24039717-24039736 | None:intergenic | 35.0% | |
| ! | TTTTAGTATGTTGGATGGGA+AGG | + | chr1_4:24039718-24039737 | None:intergenic | 35.0% |
| !!! | CCTGTTTTAGTATGTTGGAT+GGG | + | chr1_4:24039722-24039741 | None:intergenic | 35.0% |
| ! | AGATGGTGCTAGACTATTCT+AGG | - | chr1_4:24031670-24031689 | Msa0157080:three_prime_UTR | 40.0% |
| ACGCTGTGCTAGATTATTCT+AGG | - | chr1_4:24031743-24031762 | Msa0157080:three_prime_UTR | 40.0% | |
| CTGTGCTAGATTATTCTAGG+TGG | - | chr1_4:24031746-24031765 | Msa0157080:three_prime_UTR | 40.0% | |
| TAGAAGCTTGGAGTTACTCT+TGG | + | chr1_4:24031804-24031823 | None:intergenic | 40.0% | |
| GAGCAAACAAGCCATGTTAA+AGG | + | chr1_4:24032108-24032127 | None:intergenic | 40.0% | |
| !! | TGGGTTGGTTAGTAGATTCA+TGG | + | chr1_4:24032130-24032149 | None:intergenic | 40.0% |
| CCAAATCTACGTCAAAGTGT+TGG | + | chr1_4:24032150-24032169 | None:intergenic | 40.0% | |
| CCAACACTTTGACGTAGATT+TGG | - | chr1_4:24032147-24032166 | Msa0157080:intron | 40.0% | |
| CTCAGAGATCTTACAAAGGA+AGG | + | chr1_4:24032250-24032269 | None:intergenic | 40.0% | |
| AAGAATCCAGTTAGACATGG+CGG | + | chr1_4:24032303-24032322 | None:intergenic | 40.0% | |
| AAGGATCCTTGAGTAACTTG+GGG | + | chr1_4:24032387-24032406 | None:intergenic | 40.0% | |
| GAAGGATCCTTGAGTAACTT+GGG | + | chr1_4:24032388-24032407 | None:intergenic | 40.0% | |
| AGAAGGATCCTTGAGTAACT+TGG | + | chr1_4:24032389-24032408 | None:intergenic | 40.0% | |
| ! | ATCAAGTTGTTTGGCTCAGA+AGG | + | chr1_4:24032406-24032425 | None:intergenic | 40.0% |
| AGGCTATTAAGAGATGAAGG+TGG | + | chr1_4:24032797-24032816 | None:intergenic | 40.0% | |
| AGCAGGCTATTAAGAGATGA+AGG | + | chr1_4:24032800-24032819 | None:intergenic | 40.0% | |
| GAGATAGTAGAAGTCACCAT+TGG | - | chr1_4:24033190-24033209 | Msa0157080:CDS | 40.0% | |
| TGGTTCTCCAAAGTTCAATC+TGG | + | chr1_4:24033317-24033336 | None:intergenic | 40.0% | |
| ! | AGATTGAACTTTGGAGAACC+AGG | - | chr1_4:24033316-24033335 | Msa0157080:CDS | 40.0% |
| ! | AACTTAATCTAGGATTGCCC+TGG | - | chr1_4:24033342-24033361 | Msa0157080:CDS | 40.0% |
| TTGAGGCAGATAGATTAACC+AGG | + | chr1_4:24033470-24033489 | None:intergenic | 40.0% | |
| GACGAAGTAATATCTCTGGA+TGG | - | chr1_4:24033569-24033588 | Msa0157080:intron | 40.0% | |
| TTCATCAGGAATAGCAGAGA+AGG | + | chr1_4:24033618-24033637 | None:intergenic | 40.0% | |
| TTGACGATATGGAGTCTGTA+TGG | - | chr1_4:24033642-24033661 | Msa0157080:intron | 40.0% | |
| GATATGGAGTCTGTATGGAA+AGG | - | chr1_4:24033647-24033666 | Msa0157080:intron | 40.0% | |
| AAATGATGTGCTTACTTCCG+TGG | - | chr1_4:24033691-24033710 | Msa0157080:intron | 40.0% | |
| GAGGACTTGAATTTAGCAGT+AGG | - | chr1_4:24033725-24033744 | Msa0157080:intron | 40.0% | |
| CTTGCAAATAGCTATAGGCA+AGG | + | chr1_4:24033766-24033785 | None:intergenic | 40.0% | |
| TCTCAACTTAGAGCTCCTAA+GGG | - | chr1_4:24033893-24033912 | Msa0157080:intron | 40.0% | |
| GGGAGAAATATCTTATTCCC+GGG | - | chr1_4:24033913-24033932 | Msa0157080:intron | 40.0% | |
| AATATCTTATTCCCGGGAAC+AGG | - | chr1_4:24033919-24033938 | Msa0157080:intron | 40.0% | |
| TAAAGGTAGAAAGGTAGGTG+AGG | - | chr1_4:24034039-24034058 | Msa0157080:intron | 40.0% | |
| GTACCATGAAGCAAATGTCA+AGG | - | chr1_4:24034209-24034228 | Msa0157080:intron | 40.0% | |
| TTGCCTTGACATTTGCTTCA+TGG | + | chr1_4:24034215-24034234 | None:intergenic | 40.0% | |
| ! | CAAGGCAAACACTAGAGTTT+TGG | - | chr1_4:24034227-24034246 | Msa0157080:intron | 40.0% |
| CACATGAGCATATAACGCTT+TGG | + | chr1_4:24034331-24034350 | None:intergenic | 40.0% | |
| AAGCGTTATATGCTCATGTG+AGG | - | chr1_4:24034331-24034350 | Msa0157080:intron | 40.0% | |
| TGGAGTGTGTATTGCATTAG+TGG | - | chr1_4:24034696-24034715 | Msa0157080:intron | 40.0% | |
| !! | CATTCCACTGTGTTTTGAAC+TGG | - | chr1_4:24034865-24034884 | Msa0157080:intron | 40.0% |
| !! | TTCCACTGTGTTTTGAACTG+GGG | - | chr1_4:24034867-24034886 | Msa0157080:intron | 40.0% |
| TCATTGATGTCTTGCAGTGA+AGG | - | chr1_4:24034971-24034990 | Msa0157080:intron | 40.0% | |
| CATTGATGTCTTGCAGTGAA+GGG | - | chr1_4:24034972-24034991 | Msa0157080:intron | 40.0% | |
| TGAAGGGAGAAGAAGGAAAT+GGG | - | chr1_4:24034988-24035007 | Msa0157080:intron | 40.0% | |
| AGTAGAATCCCAGAAGTTTG+AGG | - | chr1_4:24035024-24035043 | Msa0157080:intron | 40.0% | |
| GGGAAATTGAATCACGACAT+AGG | - | chr1_4:24035074-24035093 | Msa0157080:intron | 40.0% | |
| CGTACATCGCAGGAATAAAA+CGG | + | chr1_4:24035190-24035209 | None:intergenic | 40.0% | |
| TATATCTTGTCGTACATCGC+AGG | + | chr1_4:24035200-24035219 | None:intergenic | 40.0% | |
| ACTACTTCAACTGTGACCAT+TGG | + | chr1_4:24035274-24035293 | None:intergenic | 40.0% | |
| AGTTTAAATCCCCTAGGGTA+CGG | - | chr1_4:24035330-24035349 | Msa0157080:CDS | 40.0% | |
| ! | ATTTTACAACCGTACCCTAG+GGG | + | chr1_4:24035342-24035361 | None:intergenic | 40.0% |
| ! | CATTTTACAACCGTACCCTA+GGG | + | chr1_4:24035343-24035362 | None:intergenic | 40.0% |
| ! | TCATTTTACAACCGTACCCT+AGG | + | chr1_4:24035344-24035363 | None:intergenic | 40.0% |
| ! | TCTGTCAGTAGTGCTGAATT+TGG | - | chr1_4:24035392-24035411 | Msa0157080:CDS | 40.0% |
| ! | GCTAAGTGTTTTCTTCCATG+AGG | - | chr1_4:24035635-24035654 | Msa0157080:intron | 40.0% |
| CTTTGTCAAACTGTTGTTGC+AGG | - | chr1_4:24035842-24035861 | Msa0157080:intron | 40.0% | |
| TCAAACTGTTGTTGCAGGAT+GGG | - | chr1_4:24035847-24035866 | Msa0157080:intron | 40.0% | |
| CTTGATTTACCACCACCATT+TGG | + | chr1_4:24035996-24036015 | None:intergenic | 40.0% | |
| ACTTGGGATATGTGGACTTA+TGG | - | chr1_4:24036046-24036065 | Msa0157080:intron | 40.0% | |
| ! | GTTCATTTCAGGTCTGCTAT+TGG | - | chr1_4:24036153-24036172 | Msa0157080:intron | 40.0% |
| TGTGAAGTAGCGCTATTAGA+TGG | + | chr1_4:24036633-24036652 | None:intergenic | 40.0% | |
| !!! | CGGGTTGCCCTTTTTAAAAT+TGG | + | chr1_4:24036825-24036844 | None:intergenic | 40.0% |
| CGTACAATACACCAAATGGT+GGG | + | chr1_4:24036889-24036908 | None:intergenic | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr1_4:24036920-24036939 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr1_4:24036921-24036940 | None:intergenic | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | + | chr1_4:24036965-24036984 | None:intergenic | 40.0% | |
| ! | CAGTACGAAGTATCTACCAT+CGG | + | chr1_4:24037068-24037087 | None:intergenic | 40.0% |
| CGTACTGAACATTGTTCACA+AGG | - | chr1_4:24037081-24037100 | Msa0157080:CDS | 40.0% | |
| ACTGAACATTGTTCACAAGG+AGG | - | chr1_4:24037084-24037103 | Msa0157080:CDS | 40.0% | |
| GGGAAGATCACACAATTAAG+AGG | - | chr1_4:24037120-24037139 | Msa0157080:CDS | 40.0% | |
| TCCCACTATTCTATGTCCTT+AGG | - | chr1_4:24037159-24037178 | Msa0157080:intron | 40.0% | |
| GTCCTTAAAAGTCCCACATT+GGG | - | chr1_4:24037246-24037265 | Msa0157080:intron | 40.0% | |
| !! | CGGTTTTGTAAGGTTGAGTT+AGG | - | chr1_4:24037327-24037346 | Msa0157080:CDS | 40.0% |
| ATCACCATATCAGAAACAGC+AGG | - | chr1_4:24037616-24037635 | Msa0157080:intron | 40.0% | |
| TCACCATATCAGAAACAGCA+GGG | - | chr1_4:24037617-24037636 | Msa0157080:intron | 40.0% | |
| !! | TATCCCTGCTGTTTCTGATA+TGG | + | chr1_4:24037623-24037642 | None:intergenic | 40.0% |
| GTACAGCAAGACTATAACAG+AGG | + | chr1_4:24037657-24037676 | None:intergenic | 40.0% | |
| !! | AGCAATGATGGATCGAAGTT+CGG | + | chr1_4:24037907-24037926 | None:intergenic | 40.0% |
| ! | CTTGTTGATGAAATATGCCG+AGG | - | chr1_4:24037951-24037970 | Msa0157080:intron | 40.0% |
| TCTTGATAGAAGTGGCTGTT+TGG | - | chr1_4:24038022-24038041 | Msa0157080:intron | 40.0% | |
| CTTGATAGAAGTGGCTGTTT+GGG | - | chr1_4:24038023-24038042 | Msa0157080:intron | 40.0% | |
| TTGATAGAAGTGGCTGTTTG+GGG | - | chr1_4:24038024-24038043 | Msa0157080:intron | 40.0% | |
| ACAGTGTTCTTGATGTTCAG+CGG | + | chr1_4:24038086-24038105 | None:intergenic | 40.0% | |
| GAACACTGTACACAAAGCAA+TGG | - | chr1_4:24038097-24038116 | Msa0157080:intron | 40.0% | |
| !!! | TTGCTTTTGAAACTGCCAAG+AGG | - | chr1_4:24038189-24038208 | Msa0157080:intron | 40.0% |
| !!! | TGCTTTTGAAACTGCCAAGA+GGG | - | chr1_4:24038190-24038209 | Msa0157080:intron | 40.0% |
| GCTCTTTGGATAACAATCTC+AGG | + | chr1_4:24038224-24038243 | None:intergenic | 40.0% | |
| ! | CTGATGCGATCTTTTTCCTT+TGG | + | chr1_4:24038484-24038503 | None:intergenic | 40.0% |
| TTGAAGAGCCTATAGTCATC+GGG | + | chr1_4:24038556-24038575 | None:intergenic | 40.0% | |
| CTTGAAGAGCCTATAGTCAT+CGG | + | chr1_4:24038557-24038576 | None:intergenic | 40.0% | |
| CCTACGTAGAGTTTCTTATC+TGG | + | chr1_4:24038599-24038618 | None:intergenic | 40.0% | |
| CCAGATAAGAAACTCTACGT+AGG | - | chr1_4:24038596-24038615 | Msa0157080:intron | 40.0% | |
| TAAGAAACTCTACGTAGGAG+AGG | - | chr1_4:24038601-24038620 | Msa0157080:intron | 40.0% | |
| CACTTACCTATGTTAAAGGG+TGG | - | chr1_4:24038687-24038706 | Msa0157080:intron | 40.0% | |
| CAACAACCACCCTTTAACAT+AGG | + | chr1_4:24038696-24038715 | None:intergenic | 40.0% | |
| !! | TTGCCTGTTCTAGAGGTATT+AGG | + | chr1_4:24038802-24038821 | None:intergenic | 40.0% |
| GAACAGGCAATTAAACTGGT+AGG | - | chr1_4:24038812-24038831 | Msa0157080:intron | 40.0% | |
| AAACTGGTAGGTACCAGAAT+TGG | - | chr1_4:24038824-24038843 | Msa0157080:intron | 40.0% | |
| !! | ACAAGGTACTGAACCAATTC+TGG | + | chr1_4:24038840-24038859 | None:intergenic | 40.0% |
| ! | GAATTGGTTCAGTACCTTGT+TGG | - | chr1_4:24038840-24038859 | Msa0157080:intron | 40.0% |
| TGTTATTAGGTGTCCCAACA+AGG | + | chr1_4:24038857-24038876 | None:intergenic | 40.0% | |
| ! | CTCAGCTTTATGTCCTATAG+AGG | + | chr1_4:24038897-24038916 | None:intergenic | 40.0% |
| TAGCAGAGTTTCTATTTGGC+AGG | + | chr1_4:24039344-24039363 | None:intergenic | 40.0% | |
| !! | GATGGTAAGCATCGGAATTT+CGG | - | chr1_4:24039409-24039428 | Msa0157080:intron | 40.0% |
| CCCATCCAACATACTAAAAC+AGG | - | chr1_4:24039719-24039738 | Msa0157080:intron | 40.0% | |
| !!! | GCCTGTTTTAGTATGTTGGA+TGG | + | chr1_4:24039723-24039742 | None:intergenic | 40.0% |
| !! | TCTACGTCAAAGTGTTGGGT+TGG | + | chr1_4:24032145-24032164 | None:intergenic | 45.0% |
| TGGGCTCAAGATCAATGTCA+TGG | + | chr1_4:24032484-24032503 | None:intergenic | 45.0% | |
| ACAACTAGGCGATTCTCAGT+AGG | - | chr1_4:24032656-24032675 | Msa0157080:intron | 45.0% | |
| AGCTAGAGCCAAATTACAGC+TGG | - | chr1_4:24033248-24033267 | Msa0157080:CDS | 45.0% | |
| GCTAGAGCCAAATTACAGCT+GGG | - | chr1_4:24033249-24033268 | Msa0157080:CDS | 45.0% | |
| TGGCTATCCCAGCTGTAATT+TGG | + | chr1_4:24033259-24033278 | None:intergenic | 45.0% | |
| ! | CAGTAATTTGGTTCAGGCTC+TGG | + | chr1_4:24033279-24033298 | None:intergenic | 45.0% |
| AGCCTGAACCAAATTACTGC+TGG | - | chr1_4:24033280-24033299 | Msa0157080:CDS | 45.0% | |
| GCCTGAACCAAATTACTGCT+GGG | - | chr1_4:24033281-24033300 | Msa0157080:CDS | 45.0% | |
| ! | TCCCAGCAGTAATTTGGTTC+AGG | + | chr1_4:24033285-24033304 | None:intergenic | 45.0% |
| TGGCTATCCCAGCAGTAATT+TGG | + | chr1_4:24033291-24033310 | None:intergenic | 45.0% | |
| ! | TCCAAAGTTCAATCTGGCTC+TGG | + | chr1_4:24033311-24033330 | None:intergenic | 45.0% |
| TAAAGCTGGAATTCTCGTGC+AGG | - | chr1_4:24033410-24033429 | Msa0157080:CDS | 45.0% | |
| ! | CTATCTGCCTCAAGTTGCAT+TGG | - | chr1_4:24033477-24033496 | Msa0157080:intron | 45.0% |
| AGGAATAGCAGAGAAGGAAC+TGG | + | chr1_4:24033612-24033631 | None:intergenic | 45.0% | |
| !! | AGGAGCTCTAAGTTGAGACA+TGG | + | chr1_4:24033891-24033910 | None:intergenic | 45.0% |
| GTCTCAACTTAGAGCTCCTA+AGG | - | chr1_4:24033892-24033911 | Msa0157080:intron | 45.0% | |
| ! | GGGGTACCAGTCCATATATT+TGG | + | chr1_4:24033977-24033996 | None:intergenic | 45.0% |
| !! | AATATATGGACTGGTACCCC+TGG | - | chr1_4:24033977-24033996 | Msa0157080:intron | 45.0% |
| GTAGAAAGGTAGGTGAGGAA+TGG | - | chr1_4:24034044-24034063 | Msa0157080:intron | 45.0% | |
| GGAATGGTTTACCACTACGA+AGG | - | chr1_4:24034060-24034079 | Msa0157080:intron | 45.0% | |
| ATGGTTTACCACTACGAAGG+TGG | - | chr1_4:24034063-24034082 | Msa0157080:intron | 45.0% | |
| AACCCCAGTTCAAAACACAG+TGG | + | chr1_4:24034872-24034891 | None:intergenic | 45.0% | |
| GTGAAGGGAGAAGAAGGAAA+TGG | - | chr1_4:24034987-24035006 | Msa0157080:intron | 45.0% | |
| GTTACATAGCTGGCACTTCA+TGG | + | chr1_4:24035297-24035316 | None:intergenic | 45.0% | |
| TCACATAATGTCAGCCCTCA+TGG | + | chr1_4:24035653-24035672 | None:intergenic | 45.0% | |
| ATGAGGGCTGACATTATGTG+AGG | - | chr1_4:24035652-24035671 | Msa0157080:intron | 45.0% | |
| GTCAAACTGTTGTTGCAGGA+TGG | - | chr1_4:24035846-24035865 | Msa0157080:intron | 45.0% | |
| TGGTTCAACATAGCAGAAGG+AGG | - | chr1_4:24035921-24035940 | Msa0157080:intron | 45.0% | |
| CTATTGACAGGACCAAATGG+TGG | - | chr1_4:24035981-24036000 | Msa0157080:intron | 45.0% | |
| ! | ATTTGTGCTGCTGCACTACT+TGG | - | chr1_4:24036029-24036048 | Msa0157080:intron | 45.0% |
| ! | TTTGTGCTGCTGCACTACTT+GGG | - | chr1_4:24036030-24036049 | Msa0157080:intron | 45.0% |
| GTCAAAATAGGGAATCACGG+CGG | + | chr1_4:24036084-24036103 | None:intergenic | 45.0% | |
| ACTTGGCATGACTCTGTTTG+TGG | - | chr1_4:24036604-24036623 | Msa0157080:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr1_4:24036890-24036909 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr1_4:24036893-24036912 | None:intergenic | 45.0% | |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr1_4:24036925-24036944 | Msa0157080:intron | 45.0% |
| TCATGTGACTGTAAGGTCAC+GGG | + | chr1_4:24036958-24036977 | None:intergenic | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | + | chr1_4:24036959-24036978 | None:intergenic | 45.0% | |
| AAAGTCTTGAGGGGTAACCT+TGG | + | chr1_4:24037001-24037020 | None:intergenic | 45.0% | |
| CATTGTTCACAAGGAGGAAG+AGG | - | chr1_4:24037090-24037109 | Msa0157080:CDS | 45.0% | |
| AAGGAGGAAGAGGCAAATGT+GGG | - | chr1_4:24037100-24037119 | Msa0157080:CDS | 45.0% | |
| GGTCCTTAAAAGTCCCACAT+TGG | - | chr1_4:24037245-24037264 | Msa0157080:intron | 45.0% | |
| ! | CACCCAATGTGGGACTTTTA+AGG | + | chr1_4:24037251-24037270 | None:intergenic | 45.0% |
| ! | TGCCTTTTCTCACCCAATGT+GGG | + | chr1_4:24037261-24037280 | None:intergenic | 45.0% |
| ! | ATGCCTTTTCTCACCCAATG+TGG | + | chr1_4:24037262-24037281 | None:intergenic | 45.0% |
| ! | TCCTTCTTAACATCGGCTAC+AGG | - | chr1_4:24037872-24037891 | Msa0157080:intron | 45.0% |
| ACCTGTAGCCGATGTTAAGA+AGG | + | chr1_4:24037876-24037895 | None:intergenic | 45.0% | |
| ! | TTCTTAACATCGGCTACAGG+TGG | - | chr1_4:24037875-24037894 | Msa0157080:intron | 45.0% |
| GAACTTCGATCCATCATTGC+TGG | - | chr1_4:24037906-24037925 | Msa0157080:intron | 45.0% | |
| AACAAGCACTAGGCTCCTTT+CGG | + | chr1_4:24037937-24037956 | None:intergenic | 45.0% | |
| ! | CTTTTGCAGTCTCTGTTCCT+CGG | + | chr1_4:24037971-24037990 | None:intergenic | 45.0% |
| GAGGAACAGAGACTGCAAAA+GGG | - | chr1_4:24037970-24037989 | Msa0157080:intron | 45.0% | |
| ATGGGCACAACTTGCATTGA+TGG | - | chr1_4:24038116-24038135 | Msa0157080:intron | 45.0% | |
| ! | TTTGAAACTGCCAAGAGGGA+AGG | - | chr1_4:24038194-24038213 | Msa0157080:intron | 45.0% |
| TGAAGAGCCTATAGTCATCG+GGG | + | chr1_4:24038555-24038574 | None:intergenic | 45.0% | |
| GGGAAAGGAAAACGTATGAG+CGG | + | chr1_4:24039091-24039110 | None:intergenic | 45.0% | |
| !! | TGTGATGGACTGATGACAGA+CGG | - | chr1_4:24039225-24039244 | Msa0157080:intron | 45.0% |
| ATGACAGACGGATAATCTCG+AGG | - | chr1_4:24039237-24039256 | Msa0157080:intron | 45.0% | |
| GTGCACATCGATCGAAAGAA+GGG | - | chr1_4:24039269-24039288 | Msa0157080:intron | 45.0% | |
| CTTAACAGGAAGCCTCGATT+CGG | + | chr1_4:24039379-24039398 | None:intergenic | 45.0% | |
| TTGCATCCGCCATGTCTAAC+TGG | - | chr1_4:24032294-24032313 | Msa0157080:intron | 50.0% | |
| GTGACTCCCCAAGTTACTCA+AGG | - | chr1_4:24032378-24032397 | Msa0157080:intron | 50.0% | |
| CTCAAAGGGGCCGTTATGAT+GGG | + | chr1_4:24032614-24032633 | None:intergenic | 50.0% | |
| TCTCAAAGGGGCCGTTATGA+TGG | + | chr1_4:24032615-24032634 | None:intergenic | 50.0% | |
| GCCAGAGCCAGATTGAACTT+TGG | - | chr1_4:24033307-24033326 | Msa0157080:CDS | 50.0% | |
| CAACTTCACATCCAGCAACC+TGG | + | chr1_4:24033535-24033554 | None:intergenic | 50.0% | |
| ACAGGAAGCAGTGTGGTTCA+AGG | - | chr1_4:24033937-24033956 | Msa0157080:intron | 50.0% | |
| CAGGAAGCAGTGTGGTTCAA+GGG | - | chr1_4:24033938-24033957 | Msa0157080:intron | 50.0% | |
| GTTTACCACTACGAAGGTGG+AGG | - | chr1_4:24034066-24034085 | Msa0157080:intron | 50.0% | |
| CTTGCAGTGAAGGGAGAAGA+AGG | - | chr1_4:24034981-24035000 | Msa0157080:intron | 50.0% | |
| AGTGCCAGCTATGTAACCTC+AGG | - | chr1_4:24035300-24035319 | Msa0157080:CDS | 50.0% | |
| GTCTCCTGAGGTTACATAGC+TGG | + | chr1_4:24035307-24035326 | None:intergenic | 50.0% | |
| TTGACAGGACCAAATGGTGG+TGG | - | chr1_4:24035984-24036003 | Msa0157080:intron | 50.0% | |
| GCTGCACTACTTGGGATATG+TGG | - | chr1_4:24036038-24036057 | Msa0157080:intron | 50.0% | |
| CTTAATTGCGGCCAACCCTT+TGG | + | chr1_4:24036437-24036456 | None:intergenic | 50.0% | |
| !! | CAAAGGGTTGGCCGCAATTA+AGG | - | chr1_4:24036435-24036454 | Msa0157080:intron | 50.0% |
| CAACTTTACCAGTTGCGCCA+AGG | - | chr1_4:24036981-24037000 | Msa0157080:intron | 50.0% | |
| CAAGGAGGAAGAGGCAAATG+TGG | - | chr1_4:24037099-24037118 | Msa0157080:CDS | 50.0% | |
| GTCCCACATTGGGTGAGAAA+AGG | - | chr1_4:24037256-24037275 | Msa0157080:intron | 50.0% | |
| !! | CCTTACAAAACCGGCTTGTG+AGG | + | chr1_4:24037320-24037339 | None:intergenic | 50.0% |
| !! | CCTCACAAGCCGGTTTTGTA+AGG | - | chr1_4:24037317-24037336 | Msa0157080:CDS | 50.0% |
| TTCGGTGGTTCCAGCAATGA+TGG | + | chr1_4:24037919-24037938 | None:intergenic | 50.0% | |
| TCATTGCTGGAACCACCGAA+AGG | - | chr1_4:24037919-24037938 | Msa0157080:intron | 50.0% | |
| CGAGGAACAGAGACTGCAAA+AGG | - | chr1_4:24037969-24037988 | Msa0157080:intron | 50.0% | |
| GCAAAAGGGACTTGCATTGC+AGG | - | chr1_4:24037984-24038003 | Msa0157080:intron | 50.0% | |
| GTTCTTGATGTTCAGCGGCA+AGG | + | chr1_4:24038081-24038100 | None:intergenic | 50.0% | |
| CCATCTTGCAGCATCCAAGT+AGG | + | chr1_4:24038152-24038171 | None:intergenic | 50.0% | |
| CCTACTTGGATGCTGCAAGA+TGG | - | chr1_4:24038149-24038168 | Msa0157080:intron | 50.0% | |
| CTCAGGAATTCCTTCCCTCT+TGG | + | chr1_4:24038207-24038226 | None:intergenic | 50.0% | |
| GAAGAGCCTATAGTCATCGG+GGG | + | chr1_4:24038554-24038573 | None:intergenic | 50.0% | |
| CGTGCACATCGATCGAAAGA+AGG | - | chr1_4:24039268-24039287 | Msa0157080:intron | 50.0% | |
| TCGATCGAAAGAAGGGATGC+AGG | - | chr1_4:24039276-24039295 | Msa0157080:intron | 50.0% | |
| !! | CCAGGCTTTTTCCTGGAACT+AGG | + | chr1_4:24039321-24039340 | None:intergenic | 50.0% |
| CCTAGTTCCAGGAAAAAGCC+TGG | - | chr1_4:24039318-24039337 | Msa0157080:intron | 50.0% | |
| GAGTTTCTATTTGGCAGGCC+AGG | + | chr1_4:24039339-24039358 | None:intergenic | 50.0% | |
| ATCAACCAGCTTCCGAATCG+AGG | - | chr1_4:24039364-24039383 | Msa0157080:intron | 50.0% | |
| TTCCGTGGACAAAGCAGCTG+AGG | - | chr1_4:24033706-24033725 | Msa0157080:intron | 55.0% | |
| ! | GTCCTCAGCTGCTTTGTCCA+CGG | + | chr1_4:24033711-24033730 | None:intergenic | 55.0% |
| ACCACACTGCTTCCTGTTCC+CGG | + | chr1_4:24033934-24033953 | None:intergenic | 55.0% | |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr1_4:24036946-24036965 | None:intergenic | 55.0% | |
| ! | CGAGTACTTGTGCTGACCGA+TGG | - | chr1_4:24037049-24037068 | Msa0157080:CDS | 55.0% |
| !! | CAAAACCGGCTTGTGAGGTG+AGG | + | chr1_4:24037315-24037334 | None:intergenic | 55.0% |
| AAGCACTAGGCTCCTTTCGG+TGG | + | chr1_4:24037934-24037953 | None:intergenic | 55.0% | |
| CCACACTGCTTCCTGTTCCC+GGG | + | chr1_4:24033933-24033952 | None:intergenic | 60.0% | |
| !! | ATGGACTGGTACCCCTGGAG+AGG | - | chr1_4:24033982-24034001 | Msa0157080:intron | 60.0% |
| AGGTGGAGGCCGCCTTATCA+AGG | - | chr1_4:24034080-24034099 | Msa0157080:intron | 60.0% | |
| ! | GGAATCACGGCGGATTCAGC+AGG | + | chr1_4:24036074-24036093 | None:intergenic | 60.0% |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr1_4:24036845-24036864 | None:intergenic | 60.0% | |
| ACTGAAGCTCCCGCATACGC+AGG | - | chr1_4:24036849-24036868 | Msa0157080:intron | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | - | chr1_4:24036850-24036869 | Msa0157080:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr1_4:24036877-24036896 | None:intergenic | 60.0% |
| AGGGGTAACCTTGGCGCAAC+TGG | + | chr1_4:24036992-24037011 | None:intergenic | 60.0% | |
| GCAGTCCTCACCTCACAAGC+CGG | - | chr1_4:24037307-24037326 | Msa0157080:CDS | 60.0% | |
| TGGCCACCCCCGATGACTAT+AGG | - | chr1_4:24038545-24038564 | Msa0157080:intron | 60.0% | |
| GAGCCTATAGTCATCGGGGG+TGG | + | chr1_4:24038551-24038570 | None:intergenic | 60.0% | |
| !! | TGGCAGGCCAGGCTTTTTCC+TGG | + | chr1_4:24039328-24039347 | None:intergenic | 60.0% |
| !! | GGAAGCCTCGATTCGGAAGC+TGG | + | chr1_4:24039372-24039391 | None:intergenic | 60.0% |
| CCCGGGAACAGGAAGCAGTG+TGG | - | chr1_4:24033930-24033949 | Msa0157080:intron | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr1_4:24036844-24036863 | None:intergenic | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr1_4:24036861-24036880 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr1_4:24036862-24036881 | None:intergenic | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr1_4:24036861-24036880 | Msa0157080:intron | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr1_4:24036862-24036881 | Msa0157080:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr1_4:24036875-24036894 | Msa0157080:intron | 65.0% | |
| GGCGGCCTCCACCTTCGTAG+TGG | + | chr1_4:24034074-24034093 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr1_4:24036855-24036874 | Msa0157080:intron | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr1_4:24036856-24036875 | Msa0157080:intron | 70.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr1_4:24036860-24036879 | Msa0157080:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 24031592 | 24039769 | 24031592 | ID=Msa0157080;Name=Msa0157080 |
| chr1_4 | mRNA | 24031592 | 24039769 | 24031592 | ID=Msa0157080-mRNA-1;Parent=Msa0157080;Name=Msa0157080-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0.71|0.62|0.87|1|1|8|316|635 |
| chr1_4 | exon | 24031592 | 24032117 | 24031592 | ID=Msa0157080-mRNA-1:exon:8354;Parent=Msa0157080-mRNA-1 |
| chr1_4 | exon | 24032739 | 24033467 | 24032739 | ID=Msa0157080-mRNA-1:exon:8353;Parent=Msa0157080-mRNA-1 |
| chr1_4 | exon | 24035198 | 24035497 | 24035198 | ID=Msa0157080-mRNA-1:exon:8352;Parent=Msa0157080-mRNA-1 |
| chr1_4 | exon | 24036316 | 24036373 | 24036316 | ID=Msa0157080-mRNA-1:exon:8351;Parent=Msa0157080-mRNA-1 |
| chr1_4 | exon | 24037009 | 24037152 | 24037009 | ID=Msa0157080-mRNA-1:exon:8350;Parent=Msa0157080-mRNA-1 |
| chr1_4 | exon | 24037260 | 24037516 | 24037260 | ID=Msa0157080-mRNA-1:exon:8349;Parent=Msa0157080-mRNA-1 |
| chr1_4 | exon | 24037619 | 24037825 | 24037619 | ID=Msa0157080-mRNA-1:exon:8348;Parent=Msa0157080-mRNA-1 |
| chr1_4 | exon | 24039767 | 24039769 | 24039767 | ID=Msa0157080-mRNA-1:exon:8347;Parent=Msa0157080-mRNA-1 |
| chr1_4 | CDS | 24039767 | 24039769 | 24039767 | ID=Msa0157080-mRNA-1:cds;Parent=Msa0157080-mRNA-1 |
| chr1_4 | CDS | 24037619 | 24037825 | 24037619 | ID=Msa0157080-mRNA-1:cds;Parent=Msa0157080-mRNA-1 |
| chr1_4 | CDS | 24037260 | 24037516 | 24037260 | ID=Msa0157080-mRNA-1:cds;Parent=Msa0157080-mRNA-1 |
| chr1_4 | CDS | 24037009 | 24037152 | 24037009 | ID=Msa0157080-mRNA-1:cds;Parent=Msa0157080-mRNA-1 |
| chr1_4 | CDS | 24036316 | 24036373 | 24036316 | ID=Msa0157080-mRNA-1:cds;Parent=Msa0157080-mRNA-1 |
| chr1_4 | CDS | 24035198 | 24035497 | 24035198 | ID=Msa0157080-mRNA-1:cds;Parent=Msa0157080-mRNA-1 |
| chr1_4 | CDS | 24032739 | 24033467 | 24032739 | ID=Msa0157080-mRNA-1:cds;Parent=Msa0157080-mRNA-1 |
| chr1_4 | CDS | 24031908 | 24032117 | 24031908 | ID=Msa0157080-mRNA-1:cds;Parent=Msa0157080-mRNA-1 |
| chr1_4 | three_prime_UTR | 24031592 | 24031907 | 24031592 | ID=Msa0157080-mRNA-1:three_prime_utr;Parent=Msa0157080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
