AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0856790


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0856790 MtrunA17_Chr5g0435111 93.333 255 9 3 1 247 1 255 7.87e-165 461
Msa0856790 MtrunA17_Chr8g0378201 47.297 148 65 1 2 136 5 152 1.08e-40 146
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 191 sgRNAs with CRISPR-Local

Find 3 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAACCTGAGGCTTCCTTTA+TGG 0.168693 5_4:-51779222 Msa0856790:three_prime_UTR
AGAACAGTGTTGAATATTAA+TGG 0.181977 5_4:+51783818 None:intergenic
AATTGGAATTAGAGGCTATT+TGG 0.208401 5_4:-51784365 Msa0856790:CDS
GAGAAGGAATTCTGAGTATA+TGG 0.229087 5_4:-51779180 Msa0856790:three_prime_UTR
ACAAAGGCAATACCTGAAAA+TGG 0.237120 5_4:-51781663 Msa0856790:three_prime_UTR
CCAAGTCTAGTTCATCTTCT+TGG 0.239311 5_4:+51779491 None:intergenic
AACTGTTAGTGGCCTTTCTT+TGG 0.246570 5_4:-51781574 Msa0856790:three_prime_UTR
TACGGATCTTTCATTACTTC+AGG 0.289822 5_4:-51778322 Msa0856790:intron
TGAAGAAGAATTGAAGAGAT+TGG 0.292149 5_4:-51784535 Msa0856790:CDS
TTAAAATTCAACCGAACATT+AGG 0.296573 5_4:+51783634 None:intergenic
TTTGAAATTGAGGGAGGTTA+TGG 0.299822 5_4:-51784502 Msa0856790:CDS
CAACCCATTGTTAAAGCTTC+GGG 0.301229 5_4:-51783679 Msa0856790:three_prime_UTR
CAGGCCAAGATCTTTCATTA+TGG 0.304009 5_4:-51779337 Msa0856790:three_prime_UTR
TCAGTTCATGTGGTTGCATA+TGG 0.310887 5_4:-51777212 Msa0856790:three_prime_UTR
AGAGGCGATTCCTTTGTTTC+AGG 0.315237 5_4:+51781636 None:intergenic
TGATGCACCGGCATTTAAAA+AGG 0.319751 5_4:-51781550 Msa0856790:three_prime_UTR
TCGCCTCTGGTGGTTTGTTT+CGG 0.326535 5_4:-51781621 Msa0856790:three_prime_UTR
GAGAAGAGAGGAAGAGGGAG+AGG 0.326670 5_4:-51784473 Msa0856790:CDS
CCATCATTAAGTTTAGGTTT+AGG 0.332274 5_4:+51784728 None:intergenic
GATTTGTTGGATTACTGTTT+CGG 0.333070 5_4:+51783870 None:intergenic
CTATTACCATCATTAAGTTT+AGG 0.335052 5_4:+51784722 None:intergenic
AGAACCAAGTGTTCTAATAA+TGG 0.344827 5_4:-51777289 Msa0856790:three_prime_UTR
AACATCAGGTTATATATGTT+TGG 0.348565 5_4:-51777249 Msa0856790:three_prime_UTR
ATTGGAATTAGAGGCTATTT+GGG 0.360018 5_4:-51784364 Msa0856790:CDS
GAGGAAGGTGGAAGAGAAGA+TGG 0.360691 5_4:-51784277 Msa0856790:CDS
AGGAGGTTGAGAAGAGGGTT+AGG 0.367802 5_4:-51784335 Msa0856790:CDS
GGAATGATGGGGTTATTCAT+TGG 0.368084 5_4:-51784799 Msa0856790:CDS
GTCATTCTTTATCCAACATC+AGG 0.368894 5_4:-51777263 Msa0856790:three_prime_UTR
CCAACCCATTGTTAAAGCTT+CGG 0.369714 5_4:-51783680 Msa0856790:three_prime_UTR
AGGAGAAAGAGGAGTGGAAA+AGG 0.372350 5_4:-51784440 Msa0856790:CDS
ATTGAAGAGATTGGGAGTTA+AGG 0.379786 5_4:-51784526 Msa0856790:CDS
ACAAGGAGTAGTTTGAGGTT+TGG 0.379921 5_4:+51778908 None:intergenic
AACATGCGTCATCAGTATAT+TGG 0.382505 5_4:-51784863 Msa0856790:CDS
GATGGAGTGGAGGGAGAAGA+TGG 0.388023 5_4:-51784244 Msa0856790:intron
TACTCCGAACTTCACCGTTC+AGG 0.388339 5_4:-51785022 Msa0856790:CDS
CGAATATGAAATTATGATAC+AGG 0.390760 5_4:+51777364 None:intergenic
TGAATTGAGTTATGATTTGT+TGG 0.393998 5_4:+51783857 None:intergenic
AAGCCGATGAACCTCCTAAT+CGG 0.394552 5_4:+51781487 None:intergenic
CTCTCCATTATTAGAACACT+TGG 0.398882 5_4:+51777285 None:intergenic
CTCGTTCTCCATCACTCCTT+AGG 0.400314 5_4:+51779554 None:intergenic
GAATGATGGGGTTATTCATT+GGG 0.402665 5_4:-51784798 Msa0856790:CDS
GAGGCGATTCCTTTGTTTCA+GGG 0.403590 5_4:+51781637 None:intergenic
CATAAAGGAAGCCTCAGGTT+AGG 0.408170 5_4:+51779223 None:intergenic
GGAAGAGAAGATGGAGGAAG+AGG 0.411440 5_4:-51784268 Msa0856790:CDS
CTCATTCTCCTCCTAATGTT+CGG 0.412156 5_4:-51783645 Msa0856790:three_prime_UTR
GGGAGTGTTGTTGTGGGGAG+AGG 0.413036 5_4:-51784389 Msa0856790:CDS
GTTTCCTTTGTGGGCAATGC+TGG 0.413312 5_4:+51777409 None:intergenic
GAAGAAGAATTGAAGAGATT+GGG 0.413686 5_4:-51784534 Msa0856790:CDS
GAAGAGGAGGAGGAGGAAGG+TGG 0.415213 5_4:-51784289 Msa0856790:CDS
GAAGATGGAGGAAGAGGAGA+TGG 0.423990 5_4:-51784262 Msa0856790:CDS
CTATCTGCAGAAGGCCATAA+AGG 0.427028 5_4:+51779208 None:intergenic
CCTTTCTTTGGCTGATGCAC+CGG 0.434505 5_4:-51781562 Msa0856790:three_prime_UTR
GGAGAAGAGGAGGAGGAGGA+AGG 0.434983 5_4:-51784292 Msa0856790:CDS
CCTGCAGCCTTCTGCACCTT+CGG 0.435704 5_4:+51778883 None:intergenic
TTCAGAACAGTTTCCTTTGT+GGG 0.437378 5_4:+51777400 None:intergenic
CGAACCATAATGAAAGATCT+TGG 0.441728 5_4:+51779333 None:intergenic
TTGTTGTGGGGAGAGGGAAT+TGG 0.442224 5_4:-51784382 Msa0856790:CDS
TGAAGAGAGAAGAGAGGAAG+AGG 0.442759 5_4:-51784479 Msa0856790:CDS
GCTAAGGCGGTACGTGCACC+AGG 0.444231 5_4:+51779586 None:intergenic
CGGTAACAAGGAGTAGTTTG+AGG 0.447611 5_4:+51778903 None:intergenic
GGAAGAGGAGATGGAGTGGA+GGG 0.450080 5_4:-51784253 Msa0856790:CDS
AGGAGGAGAAGAGGAGGAGG+AGG 0.451794 5_4:-51784296 Msa0856790:CDS
GAAGAAGGAGGTTGAGAAGA+GGG 0.452874 5_4:-51784340 Msa0856790:CDS
CATGGATTCAATTGGAATGA+TGG 0.455223 5_4:-51784812 Msa0856790:CDS
AGGAGCTTGAGGAGGAGAAG+AGG 0.455597 5_4:-51784305 Msa0856790:CDS
GGAAAAGGGGAGTGTTGTTG+TGG 0.457194 5_4:-51784396 Msa0856790:intron
ATTATGATACAGGTTTAAGC+AGG 0.460599 5_4:+51777374 None:intergenic
CCAAGAAGATGAACTAGACT+TGG 0.462137 5_4:-51779491 Msa0856790:three_prime_UTR
ATGGATTCAATTGGAATGAT+GGG 0.466532 5_4:-51784811 Msa0856790:CDS
AGGAAGAGGAGATGGAGTGG+AGG 0.468289 5_4:-51784254 Msa0856790:CDS
GCTGTAGGCATATCCCGATT+AGG 0.469524 5_4:-51781501 Msa0856790:three_prime_UTR
AAGATTCAATCCAGTGATCA+TGG 0.469707 5_4:-51784830 Msa0856790:CDS
CAGGTTGGTGAGGATGAATT+CGG 0.473756 5_4:-51779670 Msa0856790:three_prime_UTR
TTGAGGAGGAGAAGAGGAGG+AGG 0.474734 5_4:-51784299 Msa0856790:CDS
AGAGGCTATTTGGGCGAAGA+AGG 0.475459 5_4:-51784355 Msa0856790:CDS
GAAAAGGGGAGTGTTGTTGT+GGG 0.475875 5_4:-51784395 Msa0856790:intron
GGAGTAGTTTGAGGTTTGGA+TGG 0.478027 5_4:+51778912 None:intergenic
GGAGAGGGAATTGGAATTAG+AGG 0.478037 5_4:-51784373 Msa0856790:CDS
CTCAAGTTTGCCAATGCTTG+TGG 0.478682 5_4:-51777463 Msa0856790:three_prime_UTR
CAACCACCTTCCCTTTCAAA+TGG 0.479859 5_4:-51784916 Msa0856790:CDS
AAATGGGAGCCCTGAAACAA+AGG 0.480045 5_4:-51781646 Msa0856790:three_prime_UTR
TGAAACAAAGGAATCGCCTC+TGG 0.480047 5_4:-51781634 Msa0856790:three_prime_UTR
GGAGTGTTGTTGTGGGGAGA+GGG 0.483485 5_4:-51784388 Msa0856790:CDS
GACTCTGATGATTCTGATGA+TGG 0.487037 5_4:-51784585 Msa0856790:CDS
CAAAGGCAATACCTGAAAAT+GGG 0.487466 5_4:-51781662 Msa0856790:three_prime_UTR
TGGAGGAAGAGGAGATGGAG+TGG 0.487474 5_4:-51784257 Msa0856790:CDS
CCAGTGATCATGGATTCAAT+TGG 0.489192 5_4:-51784820 Msa0856790:CDS
CGAAGAAGGAGGTTGAGAAG+AGG 0.489392 5_4:-51784341 Msa0856790:CDS
TTCTTTCTGCTTCACAAGTG+TGG 0.490123 5_4:-51783734 Msa0856790:three_prime_UTR
AGCCGATGAACCTCCTAATC+GGG 0.490889 5_4:+51781488 None:intergenic
CCAATTGAATCCATGATCAC+TGG 0.492916 5_4:+51784820 None:intergenic
TTGCTAGAAGAGATGTTGAT+TGG 0.493133 5_4:+51777177 None:intergenic
TGTTCCTGAACGGTGAAGTT+CGG 0.493561 5_4:+51785018 None:intergenic
TTGGAGAAGCATATCAGCAC+TGG 0.493942 5_4:+51779510 None:intergenic
AAACCCGAAGCTTTAACAAT+GGG 0.494614 5_4:+51783676 None:intergenic
CCTTAGCATTTGTTACCCTA+AGG 0.495366 5_4:-51779570 Msa0856790:three_prime_UTR
ATTCAGAACAGTTTCCTTTG+TGG 0.496575 5_4:+51777399 None:intergenic
ATAAAGGAAGCCTCAGGTTA+GGG 0.497182 5_4:+51779224 None:intergenic
CGGTAGAGTGACGGGAATGA+AGG 0.497609 5_4:-51778409 Msa0856790:three_prime_UTR
TTAGGAGGAGAATGAGATGA+AGG 0.501955 5_4:+51783652 None:intergenic
AGAAGAGAGGAAGAGGGAGA+GGG 0.503467 5_4:-51784472 Msa0856790:CDS
GAATTCAGCGGTAGAGTGAC+GGG 0.505457 5_4:-51778417 Msa0856790:three_prime_UTR
TCGTTCTCCATCACTCCTTA+GGG 0.506828 5_4:+51779555 None:intergenic
CATTTGAAAGGGAAGGTGGT+TGG 0.507517 5_4:+51784917 None:intergenic
AGGTGGTTGGATCGTGAAGA+TGG 0.507853 5_4:+51784930 None:intergenic
ATTGAAGAGCCATGGAAGAA+AGG 0.508764 5_4:+51783761 None:intergenic
AGAAGGAATTCTGAGTATAT+GGG 0.508950 5_4:-51779179 Msa0856790:three_prime_UTR
TATAACAGAACCATGCAAAT+CGG 0.510105 5_4:-51779302 Msa0856790:three_prime_UTR
ATGCCTACAGCAACATTAGC+AGG 0.513767 5_4:+51781513 None:intergenic
GAAGAGAGAAGAGAGGAAGA+GGG 0.514578 5_4:-51784478 Msa0856790:CDS
AGCTTGAGGAGGAGAAGAGG+AGG 0.514591 5_4:-51784302 Msa0856790:CDS
GCAAAGGCTGCAAAAGAAGC+TGG 0.517282 5_4:-51779265 Msa0856790:three_prime_UTR
TACTGTTTCGGAGGAAGCAA+AGG 0.518381 5_4:+51783882 None:intergenic
CCGAAGGTGCAGAAGGCTGC+AGG 0.522313 5_4:-51778883 Msa0856790:three_prime_UTR
AGTGTGGTTTCTAACCCTCC+TGG 0.524883 5_4:-51783718 Msa0856790:three_prime_UTR
CAGGGTCAAAACGCATCCCT+TGG 0.526315 5_4:+51779605 None:intergenic
GAAAATAATGTAAACAGCCA+AGG 0.527985 5_4:-51779622 Msa0856790:three_prime_UTR
GAAGAGGGTTAGGTTAGAGA+AGG 0.529201 5_4:-51784325 Msa0856790:CDS
AAGAAAGGCCACTAACAGTT+GGG 0.530391 5_4:+51781577 None:intergenic
TTATGGTGAAGAGAGAAGAG+AGG 0.532365 5_4:-51784485 Msa0856790:CDS
AAATTCAACCGAACATTAGG+AGG 0.534291 5_4:+51783637 None:intergenic
GAAAGAGGAGTGGAAAAGGA+AGG 0.534415 5_4:-51784436 Msa0856790:CDS
AGTCAATGCACCACAAGCAT+TGG 0.535360 5_4:+51777453 None:intergenic
GTTAGAGAAGGAGCTTGAGG+AGG 0.535819 5_4:-51784313 Msa0856790:CDS
CCTAAACCTAAACTTAATGA+TGG 0.536424 5_4:-51784728 Msa0856790:intron
CACGCCACGACCATTTGAAA+GGG 0.537480 5_4:+51784906 None:intergenic
CGAACAACAGCATCATCGTA+TGG 0.539208 5_4:+51778944 None:intergenic
CCGGTGCATCAGCCAAAGAA+AGG 0.542352 5_4:+51781562 None:intergenic
CCTTCCCTTTCAAATGGTCG+TGG 0.543664 5_4:-51784910 Msa0856790:CDS
TGGCTGAATTTAACTGAACC+AGG 0.544221 5_4:+51783700 None:intergenic
ATCCCGATTAGGAGGTTCAT+CGG 0.545549 5_4:-51781490 Msa0856790:three_prime_UTR
GCAGTTGACACCACTGGTGC+TGG 0.552715 5_4:-51778381 Msa0856790:three_prime_UTR
AAAACCCGAAGCTTTAACAA+TGG 0.552775 5_4:+51783675 None:intergenic
TTTGTTACCCTAAGGAGTGA+TGG 0.553179 5_4:-51779562 Msa0856790:three_prime_UTR
TAGGTTAGAGAAGGAGCTTG+AGG 0.554470 5_4:-51784316 Msa0856790:CDS
AAAGAAAGGCCACTAACAGT+TGG 0.555253 5_4:+51781576 None:intergenic
AAACATATATAACCTGATGT+TGG 0.555437 5_4:+51777251 None:intergenic
CTTCTGCACCTTCGGTAACA+AGG 0.557864 5_4:+51778891 None:intergenic
CCGAAGCTTTAACAATGGGT+TGG 0.559271 5_4:+51783680 None:intergenic
TGGAGAAGCATATCAGCACT+GGG 0.560245 5_4:+51779511 None:intergenic
GAAGGTGGAAGAGAAGATGG+AGG 0.560726 5_4:-51784274 Msa0856790:CDS
GGCACACGTAGCTGCAGCAA+AGG 0.562775 5_4:-51779281 Msa0856790:three_prime_UTR
TCACGCCACGACCATTTGAA+AGG 0.565044 5_4:+51784905 None:intergenic
GGAATTCAGCGGTAGAGTGA+CGG 0.571820 5_4:-51778418 Msa0856790:three_prime_UTR
ACATTAGCAGGAGCACCACC+TGG 0.573506 5_4:+51781525 None:intergenic
AGAACCACATTGAAGAGCCA+TGG 0.573559 5_4:+51783753 None:intergenic
AAAATAATGTAAACAGCCAA+GGG 0.579126 5_4:-51779621 Msa0856790:three_prime_UTR
CCTTAGGGTAACAAATGCTA+AGG 0.580393 5_4:+51779570 None:intergenic
TCTTCCATGGCTCTTCAATG+TGG 0.580445 5_4:-51783757 Msa0856790:three_prime_UTR
CTTGTTACCGAAGGTGCAGA+AGG 0.585420 5_4:-51778890 Msa0856790:three_prime_UTR
GCGTTGACATGATCGGCGAT+TGG 0.586294 5_4:+51784959 None:intergenic
GCTCCTGCTAATGTTGCTGT+AGG 0.587693 5_4:-51781516 Msa0856790:three_prime_UTR
CTTTGTTATAGGAAAGACAA+AGG 0.589814 5_4:-51781679 Msa0856790:intron
GTGAACGGCGTTGACATGAT+CGG 0.590279 5_4:+51784952 None:intergenic
GGCTATTTGGGCGAAGAAGG+AGG 0.592296 5_4:-51784352 Msa0856790:CDS
AAGGCCATAAAGGAAGCCTC+AGG 0.593306 5_4:+51779218 None:intergenic
AATACTATCACAATTAGCTA+CGG 0.601113 5_4:-51778340 Msa0856790:three_prime_UTR
GCTACGTGTGCCGATTTGCA+TGG 0.603029 5_4:+51779292 None:intergenic
CGACCATTTGAAAGGGAAGG+TGG 0.603416 5_4:+51784913 None:intergenic
TAGAGTGACGGGAATGAAGG+TGG 0.603673 5_4:-51778406 Msa0856790:three_prime_UTR
GATGGTGATGATGACGGTGA+TGG 0.605527 5_4:-51784567 Msa0856790:CDS
TGAATTTAACTGAACCAGGA+GGG 0.610378 5_4:+51783704 None:intergenic
GTTTAGGGAGTGTTCCTGAA+CGG 0.611995 5_4:+51785008 None:intergenic
TGTCTTATGACCCTAACCTG+AGG 0.617249 5_4:-51779234 Msa0856790:three_prime_UTR
AACAAAGGAATCGCCTCTGG+TGG 0.618641 5_4:-51781631 Msa0856790:three_prime_UTR
GTAGGCATATCCCGATTAGG+AGG 0.620851 5_4:-51781498 Msa0856790:three_prime_UTR
TTGTTGGATTACTGTTTCGG+AGG 0.621285 5_4:+51783873 None:intergenic
TCTCTAGCACTATCTGCAGA+AGG 0.622016 5_4:+51779199 None:intergenic
TATGCTTGCAGATATACTCA+AGG 0.627173 5_4:-51779644 Msa0856790:three_prime_UTR
TGGATTCAATTGGAATGATG+GGG 0.630510 5_4:-51784810 Msa0856790:CDS
AAAAGGGGAGTGTTGTTGTG+GGG 0.631792 5_4:-51784394 Msa0856790:intron
AAACTACTCCTTGTTACCGA+AGG 0.636668 5_4:-51778899 Msa0856790:three_prime_UTR
CCACGACCATTTGAAAGGGA+AGG 0.639922 5_4:+51784910 None:intergenic
TATTCTTTGCAGGAATTCAG+CGG 0.640550 5_4:-51778429 Msa0856790:intron
GGAGACTGCAGATATCATCA+AGG 0.647359 5_4:-51779158 Msa0856790:intron
TTATGATACAGGTTTAAGCA+GGG 0.652369 5_4:+51777375 None:intergenic
GCATTGACTGTGACTGAGAG+AGG 0.655698 5_4:-51777439 Msa0856790:three_prime_UTR
CTGAATTTAACTGAACCAGG+AGG 0.662901 5_4:+51783703 None:intergenic
TCTGATGATGGTGATGATGA+CGG 0.663950 5_4:-51784573 Msa0856790:CDS
GTGGATGCAGTTGACACCAC+TGG 0.675421 5_4:-51778387 Msa0856790:three_prime_UTR
AAAAGCGTCACCAGCACCAG+TGG 0.676240 5_4:+51778371 None:intergenic
TCTGCAGATAGTGCTAGAGA+AGG 0.676637 5_4:-51779196 Msa0856790:three_prime_UTR
AATACCAGCATTGCCCACAA+AGG 0.679434 5_4:-51777413 Msa0856790:three_prime_UTR
TAGGGTAACAAATGCTAAGG+CGG 0.682155 5_4:+51779573 None:intergenic
AGACTTGGACTTAATCACAA+AGG 0.693543 5_4:-51779476 Msa0856790:intron
GCAACATGTACAGGTTGGTG+AGG 0.694645 5_4:-51779680 Msa0856790:intron
TCTCCGAAACAAACCACCAG+AGG 0.694686 5_4:+51781618 None:intergenic
TGGATCGTGAAGATGGTGAA+CGG 0.702008 5_4:+51784937 None:intergenic
AGGCTGCAGGTATTACACCA+AGG 0.733944 5_4:-51778870 Msa0856790:intron
CTAAGGCGGTACGTGCACCA+GGG 0.735969 5_4:+51779587 None:intergenic
GGAGAAGCATATCAGCACTG+GGG 0.798655 5_4:+51779512 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAATTTTTCATGATTAGT+TGG + chr5_4:51785053-51785072 None:intergenic 15.0%
!! TTCGGAGTATTTTGTTAAGA+GGG + chr5_4:51777110-51777129 None:intergenic 30.0%
!! GTTCGGAGTATTTTGTTAAG+AGG + chr5_4:51777111-51777130 None:intergenic 35.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 51777070 51785095 51777070 ID=Msa0856790;Name=Msa0856790
chr5_4 mRNA 51777070 51785095 51777070 ID=Msa0856790-mRNA-1;Parent=Msa0856790;Name=Msa0856790-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.7|0.54|1|0.7|0.54|11|1482|299
chr5_4 exon 51777070 51777509 51777070 ID=Msa0856790-mRNA-1:exon:16122;Parent=Msa0856790-mRNA-1
chr5_4 exon 51778323 51778439 51778323 ID=Msa0856790-mRNA-1:exon:16121;Parent=Msa0856790-mRNA-1
chr5_4 exon 51778871 51779008 51778871 ID=Msa0856790-mRNA-1:exon:16120;Parent=Msa0856790-mRNA-1
chr5_4 exon 51779159 51779356 51779159 ID=Msa0856790-mRNA-1:exon:16119;Parent=Msa0856790-mRNA-1
chr5_4 exon 51779477 51779689 51779477 ID=Msa0856790-mRNA-1:exon:16118;Parent=Msa0856790-mRNA-1
chr5_4 exon 51781476 51781690 51781476 ID=Msa0856790-mRNA-1:exon:16117;Parent=Msa0856790-mRNA-1
chr5_4 exon 51783632 51783963 51783632 ID=Msa0856790-mRNA-1:exon:16116;Parent=Msa0856790-mRNA-1
chr5_4 exon 51784245 51784411 51784245 ID=Msa0856790-mRNA-1:exon:16115;Parent=Msa0856790-mRNA-1
chr5_4 exon 51784421 51784627 51784421 ID=Msa0856790-mRNA-1:exon:16114;Parent=Msa0856790-mRNA-1
chr5_4 exon 51784729 51784849 51784729 ID=Msa0856790-mRNA-1:exon:16113;Parent=Msa0856790-mRNA-1
chr5_4 exon 51784862 51785095 51784862 ID=Msa0856790-mRNA-1:exon:16112;Parent=Msa0856790-mRNA-1
chr5_4 CDS 51784862 51785095 51784862 ID=Msa0856790-mRNA-1:cds;Parent=Msa0856790-mRNA-1
chr5_4 CDS 51784729 51784849 51784729 ID=Msa0856790-mRNA-1:cds;Parent=Msa0856790-mRNA-1
chr5_4 CDS 51784421 51784627 51784421 ID=Msa0856790-mRNA-1:cds;Parent=Msa0856790-mRNA-1
chr5_4 CDS 51784245 51784411 51784245 ID=Msa0856790-mRNA-1:cds;Parent=Msa0856790-mRNA-1
chr5_4 CDS 51783793 51783963 51783793 ID=Msa0856790-mRNA-1:cds;Parent=Msa0856790-mRNA-1
chr5_4 three_prime_UTR 51783632 51783792 51783632 ID=Msa0856790-mRNA-1:three_prime_utr;Parent=Msa0856790-mRNA-1
chr5_4 three_prime_UTR 51781476 51781690 51781476 ID=Msa0856790-mRNA-1:three_prime_utr;Parent=Msa0856790-mRNA-1
chr5_4 three_prime_UTR 51779477 51779689 51779477 ID=Msa0856790-mRNA-1:three_prime_utr;Parent=Msa0856790-mRNA-1
chr5_4 three_prime_UTR 51779159 51779356 51779159 ID=Msa0856790-mRNA-1:three_prime_utr;Parent=Msa0856790-mRNA-1
chr5_4 three_prime_UTR 51778871 51779008 51778871 ID=Msa0856790-mRNA-1:three_prime_utr;Parent=Msa0856790-mRNA-1
chr5_4 three_prime_UTR 51778323 51778439 51778323 ID=Msa0856790-mRNA-1:three_prime_utr;Parent=Msa0856790-mRNA-1
chr5_4 three_prime_UTR 51777070 51777509 51777070 ID=Msa0856790-mRNA-1:three_prime_utr;Parent=Msa0856790-mRNA-1
Gene Sequence

>Msa0856790

ATGAAGCGCAAAAAATGGTCAGAACTCGAAGAACAAACCCTCTTAACAAAATACTCCGAACTTCACCGTTCAGGAACACTCCCTAAACTCAAAACCCGTGAAAAAAAATTCAAACCAATCGCCGATCATGTCAACGCCGTTCACCATCTTCACGATCCAACCACCTTCCCTTTCAAATGGTCGTGGCGTGATGTTTCGATCAAAGTTCAAAACATGCGTCATCAGTATATTGGTATTCAATCCAGTGATCATGGATTCAATTGGAATGATGGGGTTATTCATTGGGAGAATTTTCTTAATTATAAACGTGTTTTTGGTGATGTTAAAATTCATCCTAAACCTAAACTTAATGATGGGTTTGAAACTGAAATTGATGACTCTGATGATTCTGATGATGGTGATGATGACGGTGATGGTGATGTTAGTGAAGAAGAATTGAAGAGATTGGGAGTTAAGGTTTTGAAATTGAGGGAGGTTATGGTGAAGAGAGAAGAGAGGAAGAGGGAGAGGGAGTTTTTGAAGGAGAAAGAGGAGTGGAAAAGGAAGGAATTTGAGTTTTCGAGGGAGTGTTGTTGTGGGGAGAGGGAATTGGAATTAGAGGCTATTTGGGCGAAGAAGGAGGTTGAGAAGAGGGTTAGGTTAGAGAAGGAGCTTGAGGAGGAGAAGAGGAGGAGGAGGAAGGTGGAAGAGAAGATGGAGGAAGAGGAGATGGAGTGGAGGGAGAAGATGAGAAAGACACAATCAAAAGACAACACGAAAAACATCATTTTAAGAAACACATTCTTGTACCTTTGCTTCCTCCGAAACAGTAATCCAACAAATCATAACTCAATTCAAATCTCACATCTTAATCCATTAATATTCAACACTGTTCTGATTCTGAATCTTTGTACTGTGTGA

Protein sequence

>Msa0856790

MKRKKWSELEEQTLLTKYSELHRSGTLPKLKTREKKFKPIADHVNAVHHLHDPTTFPFKWSWRDVSIKVQNMRHQYIGIQSSDHGFNWNDGVIHWENFLNYKRVFGDVKIHPKPKLNDGFETEIDDSDDSDDGDDDGDGDVSEEELKRLGVKVLKLREVMVKREERKREREFLKEKEEWKRKEFEFSRECCCGERELELEAIWAKKEVEKRVRLEKELEEEKRRRRKVEEKMEEEEMEWREKMRKTQSKDNTKNIILRNTFLYLCFLRNSNPTNHNSIQISHLNPLIFNTVLILNLCTV*