AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1350130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1350130 MtrunA17_Chr3g0116821 97.751 489 8 2 1 486 1 489 0.0 966
Msa1350130 MtrunA17_Chr7g0259481 61.075 465 157 7 26 485 3 448 1.88e-180 513
Msa1350130 MtrunA17_Chr2g0287231 69.643 224 56 2 87 308 14 227 1.81e-103 308
Msa1350130 MtrunA17_Chr2g0287241 54.444 180 75 2 308 485 30 204 3.30e-63 204
Msa1350130 MtrunA17_Chr3g0114371 44.939 247 94 7 244 485 63 272 1.35e-51 176
Msa1350130 MtrunA17_Chr6g0458111 30.787 445 245 16 85 484 3 429 5.67e-46 166
Msa1350130 MtrunA17_Chr6g0458091 30.787 445 245 16 85 484 3 429 5.67e-46 166
Msa1350130 MtrunA17_Chr1g0200071 30.112 445 248 16 85 484 3 429 9.69e-45 162
Msa1350130 MtrunA17_Chr1g0200091 30.112 445 248 16 85 484 3 429 9.69e-45 162
Msa1350130 MtrunA17_Chr1g0200121 29.888 445 249 16 85 484 3 429 1.46e-44 162
Msa1350130 MtrunA17_Chr4g0005781 29.663 445 250 16 85 484 3 429 2.37e-43 159
Msa1350130 MtrunA17_Chr8g0380091 29.663 445 248 16 89 486 275 701 7.93e-42 158
Msa1350130 MtrunA17_Chr1g0150331 29.587 436 239 14 85 484 3 406 1.69e-39 147
Msa1350130 MtrunA17_Chr1g0193591 30.222 450 235 19 85 481 3 426 7.13e-38 144
Msa1350130 MtrunA17_Chr1g0204031 30.512 449 236 22 85 484 3 424 1.57e-35 140
Msa1350130 MtrunA17_Chr1g0156421 28.442 443 252 15 85 481 3 426 3.19e-35 136
Msa1350130 MtrunA17_Chr8g0340771 26.906 446 265 14 84 484 2 431 1.18e-32 129
Msa1350130 MtrunA17_Chr6g0483121 27.009 448 258 13 86 484 88 515 1.62e-32 130
Msa1350130 MtrunA17_Chr8g0336511 30.000 330 185 11 79 379 67 379 2.70e-31 124
Msa1350130 MtrunA17_Chr8g0392641 26.966 445 262 13 86 484 143 570 8.52e-30 122
Msa1350130 MtrunA17_Chr5g0415391 26.933 401 239 13 114 481 9 388 1.32e-25 108
Msa1350130 MtrunA17_Chr2g0318291 31.720 186 103 3 87 248 7 192 3.85e-23 97.8
Msa1350130 MtrunA17_Chr1g0196251 26.166 386 218 14 86 444 5 350 6.68e-22 97.4
Msa1350130 MtrunA17_Chr4g0040791 30.830 253 161 7 91 340 59 300 8.87e-22 99.0
Msa1350130 MtrunA17_Chr1g0204041 32.026 153 82 3 84 214 2 154 4.00e-18 82.0
Msa1350130 MtrunA17_Chr1g0156411 33.557 149 76 3 79 205 2 149 4.41e-17 78.2
Msa1350130 MtrunA17_Chr2g0319341 26.801 347 200 15 169 481 1 327 2.53e-16 81.3
Msa1350130 MtrunA17_Chr8g0340371 26.357 258 133 10 84 304 2 239 9.65e-16 76.6
Msa1350130 MtrunA17_Chr2g0315521 26.690 281 151 9 86 332 29 288 3.21e-14 74.7
Msa1350130 MtrunA17_Chr2g0312061 26.855 283 148 11 86 332 29 288 6.14e-14 73.9
Msa1350130 MtrunA17_Chr1g0173551 24.845 322 220 8 80 393 73 380 2.03e-13 72.8
Msa1350130 MtrunA17_Chr4g0066951 34.518 197 107 8 84 269 10 195 1.31e-12 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1350130 AT4G20360.1 84.914 464 60 4 29 486 17 476 0.0 765
Msa1350130 AT4G20360.2 84.914 464 60 4 29 486 17 476 0.0 765
Msa1350130 AT4G02930.1 67.241 406 117 4 83 485 61 453 0.0 515
Msa1350130 AT1G07920.1 29.345 443 254 14 85 484 3 429 2.73e-44 162
Msa1350130 AT1G07940.4 29.345 443 254 14 85 484 3 429 2.73e-44 162
Msa1350130 AT1G07940.1 29.345 443 254 14 85 484 3 429 2.73e-44 162
Msa1350130 AT1G07940.2 29.345 443 254 14 85 484 3 429 2.73e-44 162
Msa1350130 AT1G07940.3 29.345 443 254 14 85 484 3 429 2.73e-44 162
Msa1350130 AT5G60390.3 29.345 443 254 14 85 484 3 429 2.73e-44 162
Msa1350130 AT5G60390.1 29.345 443 254 14 85 484 3 429 2.73e-44 162
Msa1350130 AT5G60390.2 29.345 443 254 14 85 484 3 429 2.73e-44 162
Msa1350130 AT1G07930.1 29.345 443 254 14 85 484 3 429 2.73e-44 162
Msa1350130 AT5G10630.4 29.452 438 258 14 89 486 315 741 3.10e-38 149
Msa1350130 AT5G10630.3 29.452 438 258 14 89 486 310 736 3.67e-38 148
Msa1350130 AT5G10630.1 29.478 441 254 15 89 486 239 665 4.18e-38 148
Msa1350130 AT5G10630.5 29.478 441 254 15 89 486 240 666 4.21e-38 148
Msa1350130 AT5G10630.2 29.478 441 254 15 89 486 240 666 4.21e-38 148
Msa1350130 AT1G18070.1 25.577 477 287 14 60 485 67 526 1.08e-31 128
Msa1350130 AT1G18070.2 25.577 477 287 14 60 485 67 526 1.08e-31 128
Msa1350130 AT1G07930.2 32.075 265 138 9 85 319 3 255 1.28e-30 122
Msa1350130 AT1G18070.3 25.205 488 286 15 60 485 67 537 5.02e-29 120
Msa1350130 AT2G31060.2 32.157 255 155 8 91 340 61 302 4.13e-21 97.1
Msa1350130 AT2G31060.3 32.046 259 154 9 91 340 61 306 3.03e-20 94.4
Msa1350130 AT2G18720.1 27.143 280 149 11 86 332 35 292 4.44e-16 80.9
Msa1350130 AT2G18720.2 27.143 280 149 11 86 332 35 292 4.44e-16 80.9
Msa1350130 AT5G13650.2 24.806 387 253 11 1 374 1 362 5.52e-16 81.3
Msa1350130 AT1G04170.2 27.046 281 150 10 86 332 30 289 1.60e-15 79.3
Msa1350130 AT1G04170.1 27.046 281 150 10 86 332 30 289 1.60e-15 79.3
Msa1350130 AT5G13650.1 24.620 329 214 8 62 374 51 361 1.97e-15 79.7
Msa1350130 AT4G18330.2 27.076 277 147 10 90 332 40 295 3.22e-15 78.2
Msa1350130 AT4G18330.1 29.843 191 105 7 90 254 40 227 9.35e-14 72.0
Msa1350130 AT5G39900.1 25.472 318 194 10 29 334 7 293 1.04e-12 70.9
Msa1350130 AT2G18720.3 27.368 190 108 5 152 332 33 201 1.06e-12 70.1

Find 181 sgRNAs with CRISPR-Local

Find 444 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATCATTGATGCAATTTA+AGG 0.087502 tig0011252:-9826 None:intergenic
GATGACATTCCGATTGTTTC+TGG 0.182010 tig0011252:+8844 Msa1350130:CDS
GGAAATGTTTCAGAAGATTT+TGG 0.183773 tig0011252:+9155 Msa1350130:CDS
CATTCAACTCTATCTAATTA+AGG 0.190638 tig0011252:-9882 None:intergenic
TTGTGTTATCCTCTCACTTT+TGG 0.213891 tig0011252:-7694 None:intergenic
GAGGCATCAACCACAGATTA+TGG 0.240783 tig0011252:-9909 None:intergenic
ATCCTCAATTGCTAGCAAAA+AGG 0.241200 tig0011252:-9007 None:intergenic
CACCTTTCTTTGCTGGTTAT+AGG 0.252585 tig0011252:+9340 Msa1350130:CDS
TGTTTCTGGTTCAGCGCTAT+TGG 0.258255 tig0011252:+8858 Msa1350130:CDS
GGATAAGATTTATAAACTTA+TGG 0.261517 tig0011252:+8936 Msa1350130:CDS
GAGGCGAGTTAGGGTTAGTT+TGG 0.273503 tig0011252:-7983 None:intergenic
AGGAGGAAGAGAGGCGAGTT+AGG 0.275765 tig0011252:-7993 None:intergenic
CGGATTGTCTTTAGTCGAAT+TGG 0.292281 tig0011252:+9724 Msa1350130:three_prime_UTR
GCCTCATATGCGTGCTATAA+TGG 0.308463 tig0011252:+9927 Msa1350130:three_prime_UTR
GGAGCGAGTGGTGGTTGGTT+TGG 0.311291 tig0011252:-8055 None:intergenic
AGGGGTGAGGTGGAGGATTG+TGG 0.312038 tig0011252:-8028 None:intergenic
CTCTCGTCTTACGAATTTCC+TGG 0.319708 tig0011252:+8820 Msa1350130:CDS
ATTGGTGGAAGGGGAGGAAA+TGG 0.323140 tig0011252:-7953 None:intergenic
TGGAGGAAGGGGTGAGGTGG+AGG 0.325736 tig0011252:-8035 None:intergenic
AGCGAGAAGGATGTGTTCTT+TGG 0.340715 tig0011252:-8442 None:intergenic
ACTTGTGGAGCTTGAAGTTC+GGG 0.340961 tig0011252:+8792 Msa1350130:CDS
GAGTGAGGAGTGATAGTTCC+AGG 0.341582 tig0011252:-9264 None:intergenic
GTTTGGAGGAAGGGGTGAGG+TGG 0.344028 tig0011252:-8038 None:intergenic
AGACATTCACCTTTCTTTGC+TGG 0.352845 tig0011252:+9333 Msa1350130:CDS
TGAAGGTGTGGGTGTGTGGT+GGG 0.357080 tig0011252:-7918 None:intergenic
TTGGTTTGGAGGAAGGGGTG+AGG 0.361287 tig0011252:-8041 None:intergenic
GGGCGGCACGGACGGTGAAA+GGG 0.362945 tig0011252:-8080 None:intergenic
ACCGTTGGAGCTGGTGTTAT+CGG 0.367859 tig0011252:+9540 Msa1350130:CDS
ATAGGGTTAAATTTAACTTT+CGG 0.368400 tig0011252:+9704 Msa1350130:three_prime_UTR
GGAGGATTGTGGAGGGGTTG+AGG 0.370592 tig0011252:-8017 None:intergenic
AACTTGTGGAGCTTGAAGTT+CGG 0.370653 tig0011252:+8791 Msa1350130:CDS
TTATCACCACGTTTAATAGT+AGG 0.374526 tig0011252:-8904 None:intergenic
GGGAGATCTGTTTGTCTTTG+AGG 0.374733 tig0011252:-8985 None:intergenic
GGTTAGTTTGGGACGGAGAT+TGG 0.379136 tig0011252:-7971 None:intergenic
GTGGTGGTTGGTTTGGAGGA+AGG 0.379395 tig0011252:-8048 None:intergenic
TCTGTTTGTCTTTGAGGGAT+TGG 0.380993 tig0011252:-8979 None:intergenic
TGGTGGTTGGTTTGGAGGAA+GGG 0.381462 tig0011252:-8047 None:intergenic
GGAGATCTGTTTGTCTTTGA+GGG 0.382317 tig0011252:-8984 None:intergenic
AGGCGAGTTAGGGTTAGTTT+GGG 0.389250 tig0011252:-7982 None:intergenic
TATTCAAAGAGGGATGGTTT+TGG 0.389492 tig0011252:+9236 Msa1350130:CDS
TGTTCTTTGGTTTGAGGCAT+AGG 0.393640 tig0011252:-8429 None:intergenic
CGGGCGGCACGGACGGTGAA+AGG 0.394872 tig0011252:-8081 None:intergenic
ATACCACGAGCACGTTCTTC+AGG 0.396105 tig0011252:-8255 None:intergenic
ATTCAACTCTATCTAATTAA+GGG 0.403038 tig0011252:-9881 None:intergenic
GTGAAGGTGTGGGTGTGTGG+TGG 0.407058 tig0011252:-7919 None:intergenic
ACGGAGATTGGTGGAAGGGG+AGG 0.407272 tig0011252:-7959 None:intergenic
GGAGGAAATGGAAGCGGAAG+TGG 0.408836 tig0011252:-7941 None:intergenic
GGAGGAAGAGAGGCGAGTTA+GGG 0.409378 tig0011252:-7992 None:intergenic
GCGAGTGGTGGTTGGTTTGG+AGG 0.412925 tig0011252:-8052 None:intergenic
GGTGGTTGGTTTGGAGGAAG+GGG 0.418455 tig0011252:-8046 None:intergenic
GTGGTGAAGGTGTGGGTGTG+TGG 0.422895 tig0011252:-7922 None:intergenic
GGGACGGAGATTGGTGGAAG+GGG 0.423977 tig0011252:-7962 None:intergenic
CTGCATCATCACTCTTCAAA+TGG 0.430090 tig0011252:+9600 Msa1350130:three_prime_UTR
GTGTTGTGAGAGTTTGAGTT+TGG 0.431138 tig0011252:-7896 None:intergenic
GGCGGCACGGACGGTGAAAG+GGG 0.436818 tig0011252:-8079 None:intergenic
GTGAGGTGGAGGATTGTGGA+GGG 0.438591 tig0011252:-8024 None:intergenic
ATTGGCGTTGGAAGCATTAG+TGG 0.440962 tig0011252:+8876 Msa1350130:CDS
TGAGGTGGAGGATTGTGGAG+GGG 0.441869 tig0011252:-8023 None:intergenic
TATGTCAAGAATATGATTAC+CGG 0.443510 tig0011252:+8357 Msa1350130:CDS
AAGAGTGATGATGCAGCAAC+TGG 0.446921 tig0011252:-9593 None:intergenic
AGGCATCAACCACAGATTAT+GGG 0.451764 tig0011252:-9908 None:intergenic
GATTGTGGAGGGGTTGAGGA+AGG 0.459794 tig0011252:-8013 None:intergenic
ATGAGGTTTGCTATTAGAGA+AGG 0.465146 tig0011252:+9510 Msa1350130:CDS
TTGTGAGAGTTTGAGTTTGG+TGG 0.467241 tig0011252:-7893 None:intergenic
GGTTGAGGAAGGAGGAAGAG+AGG 0.468935 tig0011252:-8002 None:intergenic
GGTGAGGTGGAGGATTGTGG+AGG 0.468994 tig0011252:-8025 None:intergenic
GGTGATGTAGTTGACCTTGT+TGG 0.469409 tig0011252:+9096 Msa1350130:CDS
GGCACGGACGGTGAAAGGGG+AGG 0.483277 tig0011252:-8076 None:intergenic
CAGAAGATTGATATTCAAAG+AGG 0.486716 tig0011252:+9225 Msa1350130:CDS
AGGTTTGCTATTAGAGAAGG+AGG 0.486983 tig0011252:+9513 Msa1350130:CDS
ATGAGAACCACAGATGTTAC+CGG 0.488905 tig0011252:+9375 Msa1350130:CDS
GGCGCTATTCTTGTTGTCTC+CGG 0.489372 tig0011252:+8396 Msa1350130:CDS
TAGTTGACCTTGTTGGTTTG+AGG 0.490161 tig0011252:+9103 Msa1350130:CDS
TGTGGAGGGGTTGAGGAAGG+AGG 0.491699 tig0011252:-8010 None:intergenic
TATCACCACGTTTAATAGTA+GGG 0.492921 tig0011252:-8903 None:intergenic
CTTGTTGTCTCCGGTGCCGA+TGG 0.493396 tig0011252:+8405 Msa1350130:CDS
TGCCACCGGAAGAATTGAAA+GGG 0.496315 tig0011252:+9059 Msa1350130:CDS
AGTTGACCTTGTTGGTTTGA+GGG 0.496349 tig0011252:+9104 Msa1350130:CDS
GGGGAGGAGCGAGTGGTGGT+TGG 0.499727 tig0011252:-8060 None:intergenic
CGAATTTGCCACGGGCGGCA+CGG 0.503769 tig0011252:-8092 None:intergenic
GATTACCGGTGCTGCTCAGA+TGG 0.505532 tig0011252:+8371 Msa1350130:CDS
TTTGCCACGGGCGGCACGGA+CGG 0.506319 tig0011252:-8088 None:intergenic
TTTGCGCTCGAATTTGCCAC+GGG 0.508126 tig0011252:-8100 None:intergenic
TCCATTATAGCACGCATATG+AGG 0.508261 tig0011252:-9928 None:intergenic
AGGATGTGTTCTTTGGTTTG+AGG 0.511066 tig0011252:-8435 None:intergenic
ACACATCCTTCTCGCTAAGC+AGG 0.511666 tig0011252:+8449 Msa1350130:CDS
TGGTTCAGCGCTATTGGCGT+TGG 0.516474 tig0011252:+8864 Msa1350130:CDS
TTTAACCGCTGCTCTTACCA+TGG 0.516603 tig0011252:+8176 Msa1350130:CDS
GCCATGGTCGACGTGGCCGA+TGG 0.516822 tig0011252:-8145 None:intergenic
TAGTTTGGGACGGAGATTGG+TGG 0.518165 tig0011252:-7968 None:intergenic
CAATGATGAGATTGTGTTGA+GGG 0.519612 tig0011252:+9839 Msa1350130:three_prime_UTR
ATTCCTTGTTCAATAGCCAC+AGG 0.523741 tig0011252:-9489 None:intergenic
ACCGCAGACAAGTTGTATGA+AGG 0.526503 tig0011252:-9675 None:intergenic
TATGCTCATGTTGATTGTCC+CGG 0.527096 tig0011252:+8324 Msa1350130:CDS
TGAGGAGCTTCTTGAACTTG+TGG 0.528672 tig0011252:+8777 Msa1350130:CDS
AGAGAAGGAGGGAAGACCGT+TGG 0.533076 tig0011252:+9525 Msa1350130:CDS
ACAATCGGAATGTCATCTCC+AGG 0.533175 tig0011252:-8838 None:intergenic
TTCAAGAACACAACCACACT+CGG 0.534270 tig0011252:-8733 None:intergenic
TTCACCGTCCGTGCCGCCCG+TGG 0.534451 tig0011252:+8084 Msa1350130:CDS
TGGGACGGAGATTGGTGGAA+GGG 0.535402 tig0011252:-7963 None:intergenic
GGAGGGAAGACCGTTGGAGC+TGG 0.536449 tig0011252:+9531 Msa1350130:CDS
GGCCTATAACCAGCAAAGAA+AGG 0.537786 tig0011252:-9342 None:intergenic
GCCGTCCATCTGAGCAGCAC+CGG 0.540383 tig0011252:-8376 None:intergenic
GGTGAAAGGGGAGGAGCGAG+TGG 0.540841 tig0011252:-8067 None:intergenic
AAGCGGAAGTGGTGAAGGTG+TGG 0.545502 tig0011252:-7930 None:intergenic
GGTAAGAGCAGCGGTTAAAG+TGG 0.546411 tig0011252:-8172 None:intergenic
AATGGAAGCGGAAGTGGTGA+AGG 0.549887 tig0011252:-7935 None:intergenic
CTTGACATAATCAGCGTGAC+CGG 0.550183 tig0011252:-8343 None:intergenic
CAAGGATGAGGAGTCGAAGA+TGG 0.551958 tig0011252:+9422 Msa1350130:CDS
ACCATGGCTCTCGCTTCTCT+AGG 0.553614 tig0011252:+8192 Msa1350130:CDS
CAATTCATTTCGATAAGAAG+AGG 0.553893 tig0011252:+7714 Msa1350130:five_prime_UTR
GGTTTGAGGCATAGGACCAT+CGG 0.555353 tig0011252:-8421 None:intergenic
AGAAGAGAAGAGAAGAGAAG+AGG 0.555485 tig0011252:-7814 None:intergenic
TAATTACCTGCTTAGCGAGA+AGG 0.556327 tig0011252:-8455 None:intergenic
ACGAGGAGCACTACAGTGAC+CGG 0.557284 tig0011252:+9129 Msa1350130:CDS
CCGCAGACAAGTTGTATGAA+GGG 0.558624 tig0011252:-9674 None:intergenic
ACCGGTGCTGCTCAGATGGA+CGG 0.560494 tig0011252:+8375 Msa1350130:CDS
AGCGGAAGTGGTGAAGGTGT+GGG 0.561639 tig0011252:-7929 None:intergenic
GGTTTGCTATTAGAGAAGGA+GGG 0.562103 tig0011252:+9514 Msa1350130:CDS
AGCGCTGAACCAGAAACAAT+CGG 0.562250 tig0011252:-8853 None:intergenic
GGAAGGGGAGGAAATGGAAG+CGG 0.564051 tig0011252:-7947 None:intergenic
CATCTCAACATCGGAACCAT+CGG 0.564830 tig0011252:+8129 Msa1350130:CDS
TTGGGACGGAGATTGGTGGA+AGG 0.565908 tig0011252:-7964 None:intergenic
AGGCATAGGACCATCGGCAC+CGG 0.568713 tig0011252:-8415 None:intergenic
GAGTTAGGGTTAGTTTGGGA+CGG 0.569223 tig0011252:-7978 None:intergenic
GATTGATATTCAAAGAGGGA+TGG 0.573204 tig0011252:+9230 Msa1350130:CDS
TCCGATAACACCAGCTCCAA+CGG 0.573833 tig0011252:-9541 None:intergenic
GAAAGGGGAGGAGCGAGTGG+TGG 0.575537 tig0011252:-8064 None:intergenic
TTGCCACCGGAAGAATTGAA+AGG 0.577024 tig0011252:+9058 Msa1350130:CDS
GTCCCTGTGGCTATTGAACA+AGG 0.580048 tig0011252:+9486 Msa1350130:CDS
TGCTATGGCTGGTGATAACG+TGG 0.580824 tig0011252:+9182 Msa1350130:CDS
TTAAACGTGGTGATAACGAG+TGG 0.581448 tig0011252:+8911 Msa1350130:CDS
GCCTGGTGATCGTGTTAAGA+TGG 0.585668 tig0011252:+9449 Msa1350130:CDS
TGGCTATTGAACAAGGAATG+AGG 0.586309 tig0011252:+9493 Msa1350130:CDS
TCTTTCGGAGTGAAGAGAAG+AGG 0.587110 tig0011252:-7773 None:intergenic
TTCTCTTCACTCCGAAAGAG+AGG 0.587313 tig0011252:+7777 Msa1350130:five_prime_UTR
TATCATGAATGACAAGGATG+AGG 0.592077 tig0011252:+9410 Msa1350130:CDS
ACCATCTTAACACGATCACC+AGG 0.595197 tig0011252:-9450 None:intergenic
AATTAAGGGTAAAACTGTAA+CGG 0.602876 tig0011252:-9867 None:intergenic
GAAGCTCCTCATCATCCACT+TGG 0.605442 tig0011252:-8765 None:intergenic
TTGACATAATCAGCGTGACC+GGG 0.605937 tig0011252:-8342 None:intergenic
ACCATCGGCCACGTCGACCA+TGG 0.607333 tig0011252:+8144 Msa1350130:CDS
AGAAGATTGATATTCAAAGA+GGG 0.608439 tig0011252:+9226 Msa1350130:CDS
GAGTCGAAGATGGTGATGCC+TGG 0.612202 tig0011252:+9432 Msa1350130:CDS
CAACTTACAAAACATCCCGA+TGG 0.612642 tig0011252:-9758 None:intergenic
TTAGGTTGGTGTTCCGAGTG+TGG 0.613093 tig0011252:+8720 Msa1350130:intron
GCGCTCGAATTTGCCACGGG+CGG 0.613444 tig0011252:-8097 None:intergenic
GGTTGTGTTCTTGAACAAGC+AGG 0.616431 tig0011252:+8741 Msa1350130:CDS
GAGAGCCATGGTAAGAGCAG+CGG 0.616890 tig0011252:-8181 None:intergenic
CTTCTGAAACATTTCCACTC+CGG 0.617102 tig0011252:-9148 None:intergenic
GCAGGACCAAGTGGATGATG+AGG 0.618136 tig0011252:+8759 Msa1350130:CDS
CCCTTCATACAACTTGTCTG+CGG 0.619908 tig0011252:+9674 Msa1350130:three_prime_UTR
CGCGTCACTCCAAAAGTGAG+AGG 0.622139 tig0011252:+7685 Msa1350130:five_prime_UTR
ATGGTTCCGATGTTGAGATG+AGG 0.622236 tig0011252:-8126 None:intergenic
AGAAGAAATTGAAATTGCCA+TGG 0.628092 tig0011252:-7863 None:intergenic
CTTCACTCTCAATTCAACCA+TGG 0.628488 tig0011252:+7846 Msa1350130:exon
GGTCGTGGAACAGTTGCCAC+CGG 0.632950 tig0011252:+9045 Msa1350130:CDS
GCTCCTGAAGAACGTGCTCG+TGG 0.633471 tig0011252:+8252 Msa1350130:CDS
TTGTTGGTTTGAGGGAAACG+AGG 0.634090 tig0011252:+9112 Msa1350130:CDS
ACCTAGAGAAGCGAGAGCCA+TGG 0.644577 tig0011252:-8193 None:intergenic
TCGTTTCCCTCAAACCAACA+AGG 0.646895 tig0011252:-9110 None:intergenic
ACGTGGTGATAACGAGTGGG+TGG 0.647355 tig0011252:+8915 Msa1350130:CDS
GCATGAACATCGATCAGAGG+AGG 0.647518 tig0011252:-10016 None:intergenic
GGTTGAACTCATTGTCCCTG+TGG 0.649883 tig0011252:+9473 Msa1350130:CDS
TTCCTTGTTCAATAGCCACA+GGG 0.659471 tig0011252:-9488 None:intergenic
ATACATTCAAACTTAGAGTG+AGG 0.660448 tig0011252:-9279 None:intergenic
CTTGAACAAGCAGGACCAAG+TGG 0.660677 tig0011252:+8750 Msa1350130:CDS
TAAACGTGGTGATAACGAGT+GGG 0.671761 tig0011252:+8912 Msa1350130:CDS
TGGTGATCGTGTTAAGATGG+TGG 0.672574 tig0011252:+9452 Msa1350130:CDS
ATAGCATGAACATCGATCAG+AGG 0.673196 tig0011252:-10019 None:intergenic
CCACCGGAAGAATTGAAAGG+GGG 0.679857 tig0011252:+9061 Msa1350130:CDS
AACGTGGGTTTGTTGCTGAG+AGG 0.684650 tig0011252:+9198 Msa1350130:CDS
GCCACCGGAAGAATTGAAAG+GGG 0.695004 tig0011252:+9060 Msa1350130:CDS
GTGGTTCTCATGTAAAACTG+AGG 0.696417 tig0011252:-9363 None:intergenic
TACATCTATCATGAATGACA+AGG 0.699849 tig0011252:+9404 Msa1350130:CDS
TCAATGATGAGATTGTGTTG+AGG 0.708905 tig0011252:+9838 Msa1350130:three_prime_UTR
GAGCACTACAGTGACCGGAG+TGG 0.711476 tig0011252:+9134 Msa1350130:CDS
TGAATGTTACCCATAATCTG+TGG 0.721125 tig0011252:+9899 Msa1350130:three_prime_UTR
GCAAACCCTACTATTAAACG+TGG 0.729265 tig0011252:+8898 Msa1350130:CDS
GCTATGGCTGGTGATAACGT+GGG 0.737390 tig0011252:+9183 Msa1350130:CDS
TGAAGCAAAGTAGTGCACCG+CGG 0.776250 tig0011252:+7662 Msa1350130:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTCATCGTATTTTTTAG+GGG - tig0011252:8226-8245 None:intergenic 20.0%
!!! CAATTTCATCGTATTTTTTA+GGG - tig0011252:8227-8246 None:intergenic 20.0%
!!! TCAATTTCATCGTATTTTTT+AGG - tig0011252:8228-8247 None:intergenic 20.0%
!!! TCTAGTCTGTATATAAATTT+TGG + tig0011252:8613-8632 Msa1350130:intron 20.0%
!!! ATGTTTGTTTGTTTTTTGAT+TGG + tig0011252:8684-8703 Msa1350130:intron 20.0%
!! GGATAAGATTTATAAACTTA+TGG + tig0011252:8936-8955 Msa1350130:CDS 20.0%
!!! ATAGGGTTAAATTTAACTTT+CGG + tig0011252:9704-9723 Msa1350130:three_prime_UTR 20.0%
!! ATTCAACTCTATCTAATTAA+GGG - tig0011252:9884-9903 None:intergenic 20.0%
!!! AATTTCATCGTATTTTTTAG+GGG - tig0011252:8226-8245 None:intergenic 20.0%
!!! CAATTTCATCGTATTTTTTA+GGG - tig0011252:8227-8246 None:intergenic 20.0%
!!! TCAATTTCATCGTATTTTTT+AGG - tig0011252:8228-8247 None:intergenic 20.0%
!!! TCTAGTCTGTATATAAATTT+TGG + tig0011252:8613-8632 Msa1350130:intron 20.0%
!!! ATGTTTGTTTGTTTTTTGAT+TGG + tig0011252:8684-8703 Msa1350130:intron 20.0%
!! GGATAAGATTTATAAACTTA+TGG + tig0011252:8936-8955 Msa1350130:CDS 20.0%
!!! ATAGGGTTAAATTTAACTTT+CGG + tig0011252:9704-9723 Msa1350130:three_prime_UTR 20.0%
!! ATTCAACTCTATCTAATTAA+GGG - tig0011252:9884-9903 None:intergenic 20.0%
! TTAAAAAATCTAATCTGCAG+TGG + tig0011252:7628-7647 Msa1350130:five_prime_UTR 25.0%
! TAAAAAATCTAATCTGCAGT+GGG + tig0011252:7629-7648 Msa1350130:five_prime_UTR 25.0%
! TATGTCAAGAATATGATTAC+CGG + tig0011252:8357-8376 Msa1350130:CDS 25.0%
!! TTGGTGATTATCTTTATGTA+TGG + tig0011252:8632-8651 Msa1350130:intron 25.0%
!!! TTTTGAATCGTTGGTTTTAA+TGG + tig0011252:8656-8675 Msa1350130:intron 25.0%
!!! TTGTTTGTTTTTTGATTGGT+TGG + tig0011252:8688-8707 Msa1350130:intron 25.0%
! AGAAGATTGATATTCAAAGA+GGG + tig0011252:9226-9245 Msa1350130:CDS 25.0%
!!! TATTGTGTATGTTTTGAAGA+AGG + tig0011252:9299-9318 Msa1350130:CDS 25.0%
!!! ATTGGATACTATTTTTCCAT+CGG + tig0011252:9742-9761 Msa1350130:three_prime_UTR 25.0%
! AATTAAGGGTAAAACTGTAA+CGG - tig0011252:9870-9889 None:intergenic 25.0%
! CATTCAACTCTATCTAATTA+AGG - tig0011252:9885-9904 None:intergenic 25.0%
! TTAAAAAATCTAATCTGCAG+TGG + tig0011252:7628-7647 Msa1350130:five_prime_UTR 25.0%
! TAAAAAATCTAATCTGCAGT+GGG + tig0011252:7629-7648 Msa1350130:five_prime_UTR 25.0%
! TATGTCAAGAATATGATTAC+CGG + tig0011252:8357-8376 Msa1350130:CDS 25.0%
!! TTGGTGATTATCTTTATGTA+TGG + tig0011252:8632-8651 Msa1350130:intron 25.0%
!!! TTTTGAATCGTTGGTTTTAA+TGG + tig0011252:8656-8675 Msa1350130:intron 25.0%
!!! TTGTTTGTTTTTTGATTGGT+TGG + tig0011252:8688-8707 Msa1350130:intron 25.0%
! AGAAGATTGATATTCAAAGA+GGG + tig0011252:9226-9245 Msa1350130:CDS 25.0%
!!! TATTGTGTATGTTTTGAAGA+AGG + tig0011252:9299-9318 Msa1350130:CDS 25.0%
!!! ATTGGATACTATTTTTCCAT+CGG + tig0011252:9742-9761 Msa1350130:three_prime_UTR 25.0%
! AATTAAGGGTAAAACTGTAA+CGG - tig0011252:9870-9889 None:intergenic 25.0%
! CATTCAACTCTATCTAATTA+AGG - tig0011252:9885-9904 None:intergenic 25.0%
CAATTCATTTCGATAAGAAG+AGG + tig0011252:7714-7733 Msa1350130:five_prime_UTR 30.0%
! GGATTTTGTATTGTATTGTG+TGG - tig0011252:7755-7774 None:intergenic 30.0%
!! TGTTTTGTTATCCTCTCTTT+CGG - tig0011252:7791-7810 None:intergenic 30.0%
AGAAGAAATTGAAATTGCCA+TGG - tig0011252:7866-7885 None:intergenic 30.0%
! ATGTATGGTTTTTGAATCGT+TGG + tig0011252:8647-8666 Msa1350130:intron 30.0%
! ATTGGTTGGTATCTTATCTT+AGG + tig0011252:8702-8721 Msa1350130:intron 30.0%
TATCACCACGTTTAATAGTA+GGG - tig0011252:8906-8925 None:intergenic 30.0%
TTATCACCACGTTTAATAGT+AGG - tig0011252:8907-8926 None:intergenic 30.0%
! GGAAATGTTTCAGAAGATTT+TGG + tig0011252:9155-9174 Msa1350130:CDS 30.0%
CAGAAGATTGATATTCAAAG+AGG + tig0011252:9225-9244 Msa1350130:CDS 30.0%
ATACATTCAAACTTAGAGTG+AGG - tig0011252:9282-9301 None:intergenic 30.0%
!!! TATGTTTTGAAGAAGGAAGA+AGG + tig0011252:9306-9325 Msa1350130:CDS 30.0%
! CATGATAGATGTAACTTTTC+CGG - tig0011252:9397-9416 None:intergenic 30.0%
TACATCTATCATGAATGACA+AGG + tig0011252:9404-9423 Msa1350130:CDS 30.0%
! TTGTCTGCGGTAATTTTATA+GGG + tig0011252:9687-9706 Msa1350130:three_prime_UTR 30.0%
!! TTGGATACTATTTTTCCATC+GGG + tig0011252:9743-9762 Msa1350130:three_prime_UTR 30.0%
CTCATCATTGATGCAATTTA+AGG - tig0011252:9829-9848 None:intergenic 30.0%
CAATTCATTTCGATAAGAAG+AGG + tig0011252:7714-7733 Msa1350130:five_prime_UTR 30.0%
! GGATTTTGTATTGTATTGTG+TGG - tig0011252:7755-7774 None:intergenic 30.0%
!! TGTTTTGTTATCCTCTCTTT+CGG - tig0011252:7791-7810 None:intergenic 30.0%
AGAAGAAATTGAAATTGCCA+TGG - tig0011252:7866-7885 None:intergenic 30.0%
! ATGTATGGTTTTTGAATCGT+TGG + tig0011252:8647-8666 Msa1350130:intron 30.0%
! ATTGGTTGGTATCTTATCTT+AGG + tig0011252:8702-8721 Msa1350130:intron 30.0%
TATCACCACGTTTAATAGTA+GGG - tig0011252:8906-8925 None:intergenic 30.0%
TTATCACCACGTTTAATAGT+AGG - tig0011252:8907-8926 None:intergenic 30.0%
! GGAAATGTTTCAGAAGATTT+TGG + tig0011252:9155-9174 Msa1350130:CDS 30.0%
CAGAAGATTGATATTCAAAG+AGG + tig0011252:9225-9244 Msa1350130:CDS 30.0%
ATACATTCAAACTTAGAGTG+AGG - tig0011252:9282-9301 None:intergenic 30.0%
!!! TATGTTTTGAAGAAGGAAGA+AGG + tig0011252:9306-9325 Msa1350130:CDS 30.0%
! CATGATAGATGTAACTTTTC+CGG - tig0011252:9397-9416 None:intergenic 30.0%
TACATCTATCATGAATGACA+AGG + tig0011252:9404-9423 Msa1350130:CDS 30.0%
! TTGTCTGCGGTAATTTTATA+GGG + tig0011252:9687-9706 Msa1350130:three_prime_UTR 30.0%
!! TTGGATACTATTTTTCCATC+GGG + tig0011252:9743-9762 Msa1350130:three_prime_UTR 30.0%
CTCATCATTGATGCAATTTA+AGG - tig0011252:9829-9848 None:intergenic 30.0%
! TTGTGTTATCCTCTCACTTT+TGG - tig0011252:7697-7716 None:intergenic 35.0%
AAAAAGCCTCATCTCAACAT+CGG + tig0011252:8120-8139 Msa1350130:CDS 35.0%
GAATTAATGCAACAGCTGTA+TGG + tig0011252:8555-8574 Msa1350130:intron 35.0%
GTTGGTATCTTATCTTAGGT+TGG + tig0011252:8706-8725 Msa1350130:intron 35.0%
TCCTCAATTGCTAGCAAAAA+GGG - tig0011252:9009-9028 None:intergenic 35.0%
ATCCTCAATTGCTAGCAAAA+AGG - tig0011252:9010-9029 None:intergenic 35.0%
GATTGATATTCAAAGAGGGA+TGG + tig0011252:9230-9249 Msa1350130:CDS 35.0%
! TATTCAAAGAGGGATGGTTT+TGG + tig0011252:9236-9255 Msa1350130:CDS 35.0%
TATCATGAATGACAAGGATG+AGG + tig0011252:9410-9429 Msa1350130:CDS 35.0%
!! ATGAGGTTTGCTATTAGAGA+AGG + tig0011252:9510-9529 Msa1350130:CDS 35.0%
! CTTGTCTGCGGTAATTTTAT+AGG + tig0011252:9686-9705 Msa1350130:three_prime_UTR 35.0%
TCAATGATGAGATTGTGTTG+AGG + tig0011252:9838-9857 Msa1350130:three_prime_UTR 35.0%
CAATGATGAGATTGTGTTGA+GGG + tig0011252:9839-9858 Msa1350130:three_prime_UTR 35.0%
TGAATGTTACCCATAATCTG+TGG + tig0011252:9899-9918 Msa1350130:three_prime_UTR 35.0%
! TTGTGTTATCCTCTCACTTT+TGG - tig0011252:7697-7716 None:intergenic 35.0%
AAAAAGCCTCATCTCAACAT+CGG + tig0011252:8120-8139 Msa1350130:CDS 35.0%
GAATTAATGCAACAGCTGTA+TGG + tig0011252:8555-8574 Msa1350130:intron 35.0%
GTTGGTATCTTATCTTAGGT+TGG + tig0011252:8706-8725 Msa1350130:intron 35.0%
TCCTCAATTGCTAGCAAAAA+GGG - tig0011252:9009-9028 None:intergenic 35.0%
ATCCTCAATTGCTAGCAAAA+AGG - tig0011252:9010-9029 None:intergenic 35.0%
GATTGATATTCAAAGAGGGA+TGG + tig0011252:9230-9249 Msa1350130:CDS 35.0%
! TATTCAAAGAGGGATGGTTT+TGG + tig0011252:9236-9255 Msa1350130:CDS 35.0%
TATCATGAATGACAAGGATG+AGG + tig0011252:9410-9429 Msa1350130:CDS 35.0%
!! ATGAGGTTTGCTATTAGAGA+AGG + tig0011252:9510-9529 Msa1350130:CDS 35.0%
! CTTGTCTGCGGTAATTTTAT+AGG + tig0011252:9686-9705 Msa1350130:three_prime_UTR 35.0%
TCAATGATGAGATTGTGTTG+AGG + tig0011252:9838-9857 Msa1350130:three_prime_UTR 35.0%
CAATGATGAGATTGTGTTGA+GGG + tig0011252:9839-9858 Msa1350130:three_prime_UTR 35.0%
TGAATGTTACCCATAATCTG+TGG + tig0011252:9899-9918 Msa1350130:three_prime_UTR 35.0%
AGAAGAGAAGAGAAGAGAAG+AGG - tig0011252:7817-7836 None:intergenic 40.0%
CTTCACTCTCAATTCAACCA+TGG + tig0011252:7846-7865 Msa1350130:exon 40.0%
! TTGTGAGAGTTTGAGTTTGG+TGG - tig0011252:7896-7915 None:intergenic 40.0%
! GTGTTGTGAGAGTTTGAGTT+TGG - tig0011252:7899-7918 None:intergenic 40.0%
! TATGCTCATGTTGATTGTCC+CGG + tig0011252:8324-8343 Msa1350130:CDS 40.0%
!! TGTTCTTTGGTTTGAGGCAT+AGG - tig0011252:8432-8451 None:intergenic 40.0%
!! AGGATGTGTTCTTTGGTTTG+AGG - tig0011252:8438-8457 None:intergenic 40.0%
TAATTACCTGCTTAGCGAGA+AGG - tig0011252:8458-8477 None:intergenic 40.0%
GCAACAGCTGTATGGAATTT+AGG + tig0011252:8563-8582 Msa1350130:intron 40.0%
TTCAAGAACACAACCACACT+CGG - tig0011252:8736-8755 None:intergenic 40.0%
AACTTGTGGAGCTTGAAGTT+CGG + tig0011252:8791-8810 Msa1350130:CDS 40.0%
GATGACATTCCGATTGTTTC+TGG + tig0011252:8844-8863 Msa1350130:CDS 40.0%
GCAAACCCTACTATTAAACG+TGG + tig0011252:8898-8917 Msa1350130:CDS 40.0%
! TTAAACGTGGTGATAACGAG+TGG + tig0011252:8911-8930 Msa1350130:CDS 40.0%
! TAAACGTGGTGATAACGAGT+GGG + tig0011252:8912-8931 Msa1350130:CDS 40.0%
! TCTGTTTGTCTTTGAGGGAT+TGG - tig0011252:8982-9001 None:intergenic 40.0%
GGAGATCTGTTTGTCTTTGA+GGG - tig0011252:8987-9006 None:intergenic 40.0%
CCTCAATTGCTAGCAAAAAG+GGG - tig0011252:9008-9027 None:intergenic 40.0%
! GAGGATGTGTTTTCAATCAC+TGG + tig0011252:9024-9043 Msa1350130:CDS 40.0%
!! AATTGAAAGGGGGCTTGTTA+AGG + tig0011252:9071-9090 Msa1350130:CDS 40.0%
!! TAGTTGACCTTGTTGGTTTG+AGG + tig0011252:9103-9122 Msa1350130:CDS 40.0%
!! AGTTGACCTTGTTGGTTTGA+GGG + tig0011252:9104-9123 Msa1350130:CDS 40.0%
!! CTTCTGAAACATTTCCACTC+CGG - tig0011252:9151-9170 None:intergenic 40.0%
! GAAGATTTTGGACGATGCTA+TGG + tig0011252:9167-9186 Msa1350130:CDS 40.0%
!!! GTTTTGAAGAAGGAAGAAGG+TGG + tig0011252:9309-9328 Msa1350130:CDS 40.0%
AGACATTCACCTTTCTTTGC+TGG + tig0011252:9333-9352 Msa1350130:CDS 40.0%
! CACCTTTCTTTGCTGGTTAT+AGG + tig0011252:9340-9359 Msa1350130:CDS 40.0%
GTGGTTCTCATGTAAAACTG+AGG - tig0011252:9366-9385 None:intergenic 40.0%
ATGAGAACCACAGATGTTAC+CGG + tig0011252:9375-9394 Msa1350130:CDS 40.0%
! AACTTTTCCGGTAACATCTG+TGG - tig0011252:9385-9404 None:intergenic 40.0%
TTCCTTGTTCAATAGCCACA+GGG - tig0011252:9491-9510 None:intergenic 40.0%
ATTCCTTGTTCAATAGCCAC+AGG - tig0011252:9492-9511 None:intergenic 40.0%
TGGCTATTGAACAAGGAATG+AGG + tig0011252:9493-9512 Msa1350130:CDS 40.0%
!! AGGTTTGCTATTAGAGAAGG+AGG + tig0011252:9513-9532 Msa1350130:CDS 40.0%
!! GGTTTGCTATTAGAGAAGGA+GGG + tig0011252:9514-9533 Msa1350130:CDS 40.0%
CTGCATCATCACTCTTCAAA+TGG + tig0011252:9600-9619 Msa1350130:three_prime_UTR 40.0%
CGGATTGTCTTTAGTCGAAT+TGG + tig0011252:9724-9743 Msa1350130:three_prime_UTR 40.0%
CAACTTACAAAACATCCCGA+TGG - tig0011252:9761-9780 None:intergenic 40.0%
AGGCATCAACCACAGATTAT+GGG - tig0011252:9911-9930 None:intergenic 40.0%
TCCATTATAGCACGCATATG+AGG - tig0011252:9931-9950 None:intergenic 40.0%
AGAAGAGAAGAGAAGAGAAG+AGG - tig0011252:7817-7836 None:intergenic 40.0%
CTTCACTCTCAATTCAACCA+TGG + tig0011252:7846-7865 Msa1350130:exon 40.0%
! TTGTGAGAGTTTGAGTTTGG+TGG - tig0011252:7896-7915 None:intergenic 40.0%
! GTGTTGTGAGAGTTTGAGTT+TGG - tig0011252:7899-7918 None:intergenic 40.0%
! TATGCTCATGTTGATTGTCC+CGG + tig0011252:8324-8343 Msa1350130:CDS 40.0%
!! TGTTCTTTGGTTTGAGGCAT+AGG - tig0011252:8432-8451 None:intergenic 40.0%
!! AGGATGTGTTCTTTGGTTTG+AGG - tig0011252:8438-8457 None:intergenic 40.0%
TAATTACCTGCTTAGCGAGA+AGG - tig0011252:8458-8477 None:intergenic 40.0%
GCAACAGCTGTATGGAATTT+AGG + tig0011252:8563-8582 Msa1350130:intron 40.0%
TTCAAGAACACAACCACACT+CGG - tig0011252:8736-8755 None:intergenic 40.0%
AACTTGTGGAGCTTGAAGTT+CGG + tig0011252:8791-8810 Msa1350130:CDS 40.0%
GATGACATTCCGATTGTTTC+TGG + tig0011252:8844-8863 Msa1350130:CDS 40.0%
GCAAACCCTACTATTAAACG+TGG + tig0011252:8898-8917 Msa1350130:CDS 40.0%
! TTAAACGTGGTGATAACGAG+TGG + tig0011252:8911-8930 Msa1350130:CDS 40.0%
! TAAACGTGGTGATAACGAGT+GGG + tig0011252:8912-8931 Msa1350130:CDS 40.0%
! TCTGTTTGTCTTTGAGGGAT+TGG - tig0011252:8982-9001 None:intergenic 40.0%
GGAGATCTGTTTGTCTTTGA+GGG - tig0011252:8987-9006 None:intergenic 40.0%
CCTCAATTGCTAGCAAAAAG+GGG - tig0011252:9008-9027 None:intergenic 40.0%
! GAGGATGTGTTTTCAATCAC+TGG + tig0011252:9024-9043 Msa1350130:CDS 40.0%
!! AATTGAAAGGGGGCTTGTTA+AGG + tig0011252:9071-9090 Msa1350130:CDS 40.0%
!! TAGTTGACCTTGTTGGTTTG+AGG + tig0011252:9103-9122 Msa1350130:CDS 40.0%
!! AGTTGACCTTGTTGGTTTGA+GGG + tig0011252:9104-9123 Msa1350130:CDS 40.0%
!! CTTCTGAAACATTTCCACTC+CGG - tig0011252:9151-9170 None:intergenic 40.0%
! GAAGATTTTGGACGATGCTA+TGG + tig0011252:9167-9186 Msa1350130:CDS 40.0%
!!! GTTTTGAAGAAGGAAGAAGG+TGG + tig0011252:9309-9328 Msa1350130:CDS 40.0%
AGACATTCACCTTTCTTTGC+TGG + tig0011252:9333-9352 Msa1350130:CDS 40.0%
! CACCTTTCTTTGCTGGTTAT+AGG + tig0011252:9340-9359 Msa1350130:CDS 40.0%
GTGGTTCTCATGTAAAACTG+AGG - tig0011252:9366-9385 None:intergenic 40.0%
ATGAGAACCACAGATGTTAC+CGG + tig0011252:9375-9394 Msa1350130:CDS 40.0%
! AACTTTTCCGGTAACATCTG+TGG - tig0011252:9385-9404 None:intergenic 40.0%
TTCCTTGTTCAATAGCCACA+GGG - tig0011252:9491-9510 None:intergenic 40.0%
ATTCCTTGTTCAATAGCCAC+AGG - tig0011252:9492-9511 None:intergenic 40.0%
TGGCTATTGAACAAGGAATG+AGG + tig0011252:9493-9512 Msa1350130:CDS 40.0%
!! AGGTTTGCTATTAGAGAAGG+AGG + tig0011252:9513-9532 Msa1350130:CDS 40.0%
!! GGTTTGCTATTAGAGAAGGA+GGG + tig0011252:9514-9533 Msa1350130:CDS 40.0%
CTGCATCATCACTCTTCAAA+TGG + tig0011252:9600-9619 Msa1350130:three_prime_UTR 40.0%
CGGATTGTCTTTAGTCGAAT+TGG + tig0011252:9724-9743 Msa1350130:three_prime_UTR 40.0%
CAACTTACAAAACATCCCGA+TGG - tig0011252:9761-9780 None:intergenic 40.0%
AGGCATCAACCACAGATTAT+GGG - tig0011252:9911-9930 None:intergenic 40.0%
TCCATTATAGCACGCATATG+AGG - tig0011252:9931-9950 None:intergenic 40.0%
TCTTTCGGAGTGAAGAGAAG+AGG - tig0011252:7776-7795 None:intergenic 45.0%
TTCTCTTCACTCCGAAAGAG+AGG + tig0011252:7777-7796 Msa1350130:five_prime_UTR 45.0%
!! GAGTTAGGGTTAGTTTGGGA+CGG - tig0011252:7981-8000 None:intergenic 45.0%
!! AGGCGAGTTAGGGTTAGTTT+GGG - tig0011252:7985-8004 None:intergenic 45.0%
! TTTTGCGCTCGAATTTGCCA+CGG - tig0011252:8104-8123 None:intergenic 45.0%
ATGGTTCCGATGTTGAGATG+AGG - tig0011252:8129-8148 None:intergenic 45.0%
CATCTCAACATCGGAACCAT+CGG + tig0011252:8129-8148 Msa1350130:CDS 45.0%
!! CGGTTAAAGTGGTTTTGCCA+TGG - tig0011252:8164-8183 None:intergenic 45.0%
TTTAACCGCTGCTCTTACCA+TGG + tig0011252:8176-8195 Msa1350130:CDS 45.0%
TTGACATAATCAGCGTGACC+GGG - tig0011252:8345-8364 None:intergenic 45.0%
CTTGACATAATCAGCGTGAC+CGG - tig0011252:8346-8365 None:intergenic 45.0%
AGCGAGAAGGATGTGTTCTT+TGG - tig0011252:8445-8464 None:intergenic 45.0%
GGTTGTGTTCTTGAACAAGC+AGG + tig0011252:8741-8760 Msa1350130:CDS 45.0%
TGAGGAGCTTCTTGAACTTG+TGG + tig0011252:8777-8796 Msa1350130:CDS 45.0%
ACTTGTGGAGCTTGAAGTTC+GGG + tig0011252:8792-8811 Msa1350130:CDS 45.0%
CTCTCGTCTTACGAATTTCC+TGG + tig0011252:8820-8839 Msa1350130:CDS 45.0%
ACAATCGGAATGTCATCTCC+AGG - tig0011252:8841-8860 None:intergenic 45.0%
! AGCGCTGAACCAGAAACAAT+CGG - tig0011252:8856-8875 None:intergenic 45.0%
!! TGTTTCTGGTTCAGCGCTAT+TGG + tig0011252:8858-8877 Msa1350130:CDS 45.0%
!! ATTGGCGTTGGAAGCATTAG+TGG + tig0011252:8876-8895 Msa1350130:CDS 45.0%
GGGAGATCTGTTTGTCTTTG+AGG - tig0011252:8988-9007 None:intergenic 45.0%
! CCCCTTTTTGCTAGCAATTG+AGG + tig0011252:9005-9024 Msa1350130:CDS 45.0%
! GTGTTTTCAATCACTGGTCG+TGG + tig0011252:9030-9049 Msa1350130:CDS 45.0%
TTGCCACCGGAAGAATTGAA+AGG + tig0011252:9058-9077 Msa1350130:CDS 45.0%
TGCCACCGGAAGAATTGAAA+GGG + tig0011252:9059-9078 Msa1350130:CDS 45.0%
AAGCCCCCTTTCAATTCTTC+CGG - tig0011252:9067-9086 None:intergenic 45.0%
GGTGATGTAGTTGACCTTGT+TGG + tig0011252:9096-9115 Msa1350130:CDS 45.0%
TCGTTTCCCTCAAACCAACA+AGG - tig0011252:9113-9132 None:intergenic 45.0%
!! TTGTTGGTTTGAGGGAAACG+AGG + tig0011252:9112-9131 Msa1350130:CDS 45.0%
! ATTTTGGACGATGCTATGGC+TGG + tig0011252:9171-9190 Msa1350130:CDS 45.0%
GGCCTATAACCAGCAAAGAA+AGG - tig0011252:9345-9364 None:intergenic 45.0%
ACCATCTTAACACGATCACC+AGG - tig0011252:9453-9472 None:intergenic 45.0%
TGGTGATCGTGTTAAGATGG+TGG + tig0011252:9452-9471 Msa1350130:CDS 45.0%
! AAGAGTGATGATGCAGCAAC+TGG - tig0011252:9596-9615 None:intergenic 45.0%
CCGCAGACAAGTTGTATGAA+GGG - tig0011252:9677-9696 None:intergenic 45.0%
CCCTTCATACAACTTGTCTG+CGG + tig0011252:9674-9693 Msa1350130:three_prime_UTR 45.0%
ACCGCAGACAAGTTGTATGA+AGG - tig0011252:9678-9697 None:intergenic 45.0%
! GAGGCATCAACCACAGATTA+TGG - tig0011252:9912-9931 None:intergenic 45.0%
GCCTCATATGCGTGCTATAA+TGG + tig0011252:9927-9946 Msa1350130:three_prime_UTR 45.0%
TCTTTCGGAGTGAAGAGAAG+AGG - tig0011252:7776-7795 None:intergenic 45.0%
TTCTCTTCACTCCGAAAGAG+AGG + tig0011252:7777-7796 Msa1350130:five_prime_UTR 45.0%
!! GAGTTAGGGTTAGTTTGGGA+CGG - tig0011252:7981-8000 None:intergenic 45.0%
!! AGGCGAGTTAGGGTTAGTTT+GGG - tig0011252:7985-8004 None:intergenic 45.0%
! TTTTGCGCTCGAATTTGCCA+CGG - tig0011252:8104-8123 None:intergenic 45.0%
ATGGTTCCGATGTTGAGATG+AGG - tig0011252:8129-8148 None:intergenic 45.0%
CATCTCAACATCGGAACCAT+CGG + tig0011252:8129-8148 Msa1350130:CDS 45.0%
!! CGGTTAAAGTGGTTTTGCCA+TGG - tig0011252:8164-8183 None:intergenic 45.0%
TTTAACCGCTGCTCTTACCA+TGG + tig0011252:8176-8195 Msa1350130:CDS 45.0%
TTGACATAATCAGCGTGACC+GGG - tig0011252:8345-8364 None:intergenic 45.0%
CTTGACATAATCAGCGTGAC+CGG - tig0011252:8346-8365 None:intergenic 45.0%
AGCGAGAAGGATGTGTTCTT+TGG - tig0011252:8445-8464 None:intergenic 45.0%
GGTTGTGTTCTTGAACAAGC+AGG + tig0011252:8741-8760 Msa1350130:CDS 45.0%
TGAGGAGCTTCTTGAACTTG+TGG + tig0011252:8777-8796 Msa1350130:CDS 45.0%
ACTTGTGGAGCTTGAAGTTC+GGG + tig0011252:8792-8811 Msa1350130:CDS 45.0%
CTCTCGTCTTACGAATTTCC+TGG + tig0011252:8820-8839 Msa1350130:CDS 45.0%
ACAATCGGAATGTCATCTCC+AGG - tig0011252:8841-8860 None:intergenic 45.0%
! AGCGCTGAACCAGAAACAAT+CGG - tig0011252:8856-8875 None:intergenic 45.0%
!! TGTTTCTGGTTCAGCGCTAT+TGG + tig0011252:8858-8877 Msa1350130:CDS 45.0%
!! ATTGGCGTTGGAAGCATTAG+TGG + tig0011252:8876-8895 Msa1350130:CDS 45.0%
GGGAGATCTGTTTGTCTTTG+AGG - tig0011252:8988-9007 None:intergenic 45.0%
! CCCCTTTTTGCTAGCAATTG+AGG + tig0011252:9005-9024 Msa1350130:CDS 45.0%
! GTGTTTTCAATCACTGGTCG+TGG + tig0011252:9030-9049 Msa1350130:CDS 45.0%
TTGCCACCGGAAGAATTGAA+AGG + tig0011252:9058-9077 Msa1350130:CDS 45.0%
TGCCACCGGAAGAATTGAAA+GGG + tig0011252:9059-9078 Msa1350130:CDS 45.0%
AAGCCCCCTTTCAATTCTTC+CGG - tig0011252:9067-9086 None:intergenic 45.0%
GGTGATGTAGTTGACCTTGT+TGG + tig0011252:9096-9115 Msa1350130:CDS 45.0%
TCGTTTCCCTCAAACCAACA+AGG - tig0011252:9113-9132 None:intergenic 45.0%
!! TTGTTGGTTTGAGGGAAACG+AGG + tig0011252:9112-9131 Msa1350130:CDS 45.0%
! ATTTTGGACGATGCTATGGC+TGG + tig0011252:9171-9190 Msa1350130:CDS 45.0%
GGCCTATAACCAGCAAAGAA+AGG - tig0011252:9345-9364 None:intergenic 45.0%
ACCATCTTAACACGATCACC+AGG - tig0011252:9453-9472 None:intergenic 45.0%
TGGTGATCGTGTTAAGATGG+TGG + tig0011252:9452-9471 Msa1350130:CDS 45.0%
! AAGAGTGATGATGCAGCAAC+TGG - tig0011252:9596-9615 None:intergenic 45.0%
CCGCAGACAAGTTGTATGAA+GGG - tig0011252:9677-9696 None:intergenic 45.0%
CCCTTCATACAACTTGTCTG+CGG + tig0011252:9674-9693 Msa1350130:three_prime_UTR 45.0%
ACCGCAGACAAGTTGTATGA+AGG - tig0011252:9678-9697 None:intergenic 45.0%
! GAGGCATCAACCACAGATTA+TGG - tig0011252:9912-9931 None:intergenic 45.0%
GCCTCATATGCGTGCTATAA+TGG + tig0011252:9927-9946 Msa1350130:three_prime_UTR 45.0%
TGAAGCAAAGTAGTGCACCG+CGG + tig0011252:7662-7681 Msa1350130:five_prime_UTR 50.0%
AATGGAAGCGGAAGTGGTGA+AGG - tig0011252:7938-7957 None:intergenic 50.0%
ATTGGTGGAAGGGGAGGAAA+TGG - tig0011252:7956-7975 None:intergenic 50.0%
! TAGTTTGGGACGGAGATTGG+TGG - tig0011252:7971-7990 None:intergenic 50.0%
!! GGTTAGTTTGGGACGGAGAT+TGG - tig0011252:7974-7993 None:intergenic 50.0%
!! GAGGCGAGTTAGGGTTAGTT+TGG - tig0011252:7986-8005 None:intergenic 50.0%
!! TGGTGGTTGGTTTGGAGGAA+GGG - tig0011252:8050-8069 None:intergenic 50.0%
TTTGCGCTCGAATTTGCCAC+GGG - tig0011252:8103-8122 None:intergenic 50.0%
GGTAAGAGCAGCGGTTAAAG+TGG - tig0011252:8175-8194 None:intergenic 50.0%
ATACCACGAGCACGTTCTTC+AGG - tig0011252:8258-8277 None:intergenic 50.0%
! GGCGCTATTCTTGTTGTCTC+CGG + tig0011252:8396-8415 Msa1350130:CDS 50.0%
! GGTTTGAGGCATAGGACCAT+CGG - tig0011252:8424-8443 None:intergenic 50.0%
ACACATCCTTCTCGCTAAGC+AGG + tig0011252:8449-8468 Msa1350130:CDS 50.0%
!! TTAGGTTGGTGTTCCGAGTG+TGG + tig0011252:8720-8739 Msa1350130:intron 50.0%
CTTGAACAAGCAGGACCAAG+TGG + tig0011252:8750-8769 Msa1350130:CDS 50.0%
GAAGCTCCTCATCATCCACT+TGG - tig0011252:8768-8787 None:intergenic 50.0%
GCCACCGGAAGAATTGAAAG+GGG + tig0011252:9060-9079 Msa1350130:CDS 50.0%
CCACCGGAAGAATTGAAAGG+GGG + tig0011252:9061-9080 Msa1350130:CDS 50.0%
!! GAAAGGGGGCTTGTTAAGGT+TGG + tig0011252:9075-9094 Msa1350130:CDS 50.0%
! TGCTATGGCTGGTGATAACG+TGG + tig0011252:9182-9201 Msa1350130:CDS 50.0%
! GCTATGGCTGGTGATAACGT+GGG + tig0011252:9183-9202 Msa1350130:CDS 50.0%
!! AACGTGGGTTTGTTGCTGAG+AGG + tig0011252:9198-9217 Msa1350130:CDS 50.0%
GAGTGAGGAGTGATAGTTCC+AGG - tig0011252:9267-9286 None:intergenic 50.0%
CAAGGATGAGGAGTCGAAGA+TGG + tig0011252:9422-9441 Msa1350130:CDS 50.0%
GCCTGGTGATCGTGTTAAGA+TGG + tig0011252:9449-9468 Msa1350130:CDS 50.0%
GGTTGAACTCATTGTCCCTG+TGG + tig0011252:9473-9492 Msa1350130:CDS 50.0%
GTCCCTGTGGCTATTGAACA+AGG + tig0011252:9486-9505 Msa1350130:CDS 50.0%
!! ACCGTTGGAGCTGGTGTTAT+CGG + tig0011252:9540-9559 Msa1350130:CDS 50.0%
TCCGATAACACCAGCTCCAA+CGG - tig0011252:9544-9563 None:intergenic 50.0%
TGAAGCAAAGTAGTGCACCG+CGG + tig0011252:7662-7681 Msa1350130:five_prime_UTR 50.0%
AATGGAAGCGGAAGTGGTGA+AGG - tig0011252:7938-7957 None:intergenic 50.0%
ATTGGTGGAAGGGGAGGAAA+TGG - tig0011252:7956-7975 None:intergenic 50.0%
! TAGTTTGGGACGGAGATTGG+TGG - tig0011252:7971-7990 None:intergenic 50.0%
!! GGTTAGTTTGGGACGGAGAT+TGG - tig0011252:7974-7993 None:intergenic 50.0%
!! GAGGCGAGTTAGGGTTAGTT+TGG - tig0011252:7986-8005 None:intergenic 50.0%
!! TGGTGGTTGGTTTGGAGGAA+GGG - tig0011252:8050-8069 None:intergenic 50.0%
TTTGCGCTCGAATTTGCCAC+GGG - tig0011252:8103-8122 None:intergenic 50.0%
GGTAAGAGCAGCGGTTAAAG+TGG - tig0011252:8175-8194 None:intergenic 50.0%
ATACCACGAGCACGTTCTTC+AGG - tig0011252:8258-8277 None:intergenic 50.0%
! GGCGCTATTCTTGTTGTCTC+CGG + tig0011252:8396-8415 Msa1350130:CDS 50.0%
! GGTTTGAGGCATAGGACCAT+CGG - tig0011252:8424-8443 None:intergenic 50.0%
ACACATCCTTCTCGCTAAGC+AGG + tig0011252:8449-8468 Msa1350130:CDS 50.0%
!! TTAGGTTGGTGTTCCGAGTG+TGG + tig0011252:8720-8739 Msa1350130:intron 50.0%
CTTGAACAAGCAGGACCAAG+TGG + tig0011252:8750-8769 Msa1350130:CDS 50.0%
GAAGCTCCTCATCATCCACT+TGG - tig0011252:8768-8787 None:intergenic 50.0%
GCCACCGGAAGAATTGAAAG+GGG + tig0011252:9060-9079 Msa1350130:CDS 50.0%
CCACCGGAAGAATTGAAAGG+GGG + tig0011252:9061-9080 Msa1350130:CDS 50.0%
!! GAAAGGGGGCTTGTTAAGGT+TGG + tig0011252:9075-9094 Msa1350130:CDS 50.0%
! TGCTATGGCTGGTGATAACG+TGG + tig0011252:9182-9201 Msa1350130:CDS 50.0%
! GCTATGGCTGGTGATAACGT+GGG + tig0011252:9183-9202 Msa1350130:CDS 50.0%
!! AACGTGGGTTTGTTGCTGAG+AGG + tig0011252:9198-9217 Msa1350130:CDS 50.0%
GAGTGAGGAGTGATAGTTCC+AGG - tig0011252:9267-9286 None:intergenic 50.0%
CAAGGATGAGGAGTCGAAGA+TGG + tig0011252:9422-9441 Msa1350130:CDS 50.0%
GCCTGGTGATCGTGTTAAGA+TGG + tig0011252:9449-9468 Msa1350130:CDS 50.0%
GGTTGAACTCATTGTCCCTG+TGG + tig0011252:9473-9492 Msa1350130:CDS 50.0%
GTCCCTGTGGCTATTGAACA+AGG + tig0011252:9486-9505 Msa1350130:CDS 50.0%
!! ACCGTTGGAGCTGGTGTTAT+CGG + tig0011252:9540-9559 Msa1350130:CDS 50.0%
TCCGATAACACCAGCTCCAA+CGG - tig0011252:9544-9563 None:intergenic 50.0%
CGCGTCACTCCAAAAGTGAG+AGG + tig0011252:7685-7704 Msa1350130:five_prime_UTR 55.0%
! TGAAGGTGTGGGTGTGTGGT+GGG - tig0011252:7921-7940 None:intergenic 55.0%
! AGCGGAAGTGGTGAAGGTGT+GGG - tig0011252:7932-7951 None:intergenic 55.0%
AAGCGGAAGTGGTGAAGGTG+TGG - tig0011252:7933-7952 None:intergenic 55.0%
GGAGGAAATGGAAGCGGAAG+TGG - tig0011252:7944-7963 None:intergenic 55.0%
GGAAGGGGAGGAAATGGAAG+CGG - tig0011252:7950-7969 None:intergenic 55.0%
TGGGACGGAGATTGGTGGAA+GGG - tig0011252:7966-7985 None:intergenic 55.0%
TTGGGACGGAGATTGGTGGA+AGG - tig0011252:7967-7986 None:intergenic 55.0%
GGAGGAAGAGAGGCGAGTTA+GGG - tig0011252:7995-8014 None:intergenic 55.0%
AGGAGGAAGAGAGGCGAGTT+AGG - tig0011252:7996-8015 None:intergenic 55.0%
GGTTGAGGAAGGAGGAAGAG+AGG - tig0011252:8005-8024 None:intergenic 55.0%
GATTGTGGAGGGGTTGAGGA+AGG - tig0011252:8016-8035 None:intergenic 55.0%
TGAGGTGGAGGATTGTGGAG+GGG - tig0011252:8026-8045 None:intergenic 55.0%
GTGAGGTGGAGGATTGTGGA+GGG - tig0011252:8027-8046 None:intergenic 55.0%
!! TTGGTTTGGAGGAAGGGGTG+AGG - tig0011252:8044-8063 None:intergenic 55.0%
!! GGTGGTTGGTTTGGAGGAAG+GGG - tig0011252:8049-8068 None:intergenic 55.0%
!! GTGGTGGTTGGTTTGGAGGA+AGG - tig0011252:8051-8070 None:intergenic 55.0%
!! TGGTTTTGCCATGGTCGACG+TGG - tig0011252:8155-8174 None:intergenic 55.0%
GAGAGCCATGGTAAGAGCAG+CGG - tig0011252:8184-8203 None:intergenic 55.0%
ACCATGGCTCTCGCTTCTCT+AGG + tig0011252:8192-8211 Msa1350130:CDS 55.0%
ACCTAGAGAAGCGAGAGCCA+TGG - tig0011252:8196-8215 None:intergenic 55.0%
!! GATTACCGGTGCTGCTCAGA+TGG + tig0011252:8371-8390 Msa1350130:CDS 55.0%
GCAGGACCAAGTGGATGATG+AGG + tig0011252:8759-8778 Msa1350130:CDS 55.0%
TGGTTCAGCGCTATTGGCGT+TGG + tig0011252:8864-8883 Msa1350130:CDS 55.0%
! ACGTGGTGATAACGAGTGGG+TGG + tig0011252:8915-8934 Msa1350130:CDS 55.0%
CCCCCTTTCAATTCTTCCGG+TGG - tig0011252:9064-9083 None:intergenic 55.0%
!! ACGAGGAGCACTACAGTGAC+CGG + tig0011252:9129-9148 Msa1350130:CDS 55.0%
!!! GGGATGGTTTTGGCTAAGCC+TGG + tig0011252:9246-9265 Msa1350130:CDS 55.0%
! GAGTCGAAGATGGTGATGCC+TGG + tig0011252:9432-9451 Msa1350130:CDS 55.0%
AGAGAAGGAGGGAAGACCGT+TGG + tig0011252:9525-9544 Msa1350130:CDS 55.0%
CGCGTCACTCCAAAAGTGAG+AGG + tig0011252:7685-7704 Msa1350130:five_prime_UTR 55.0%
! TGAAGGTGTGGGTGTGTGGT+GGG - tig0011252:7921-7940 None:intergenic 55.0%
! AGCGGAAGTGGTGAAGGTGT+GGG - tig0011252:7932-7951 None:intergenic 55.0%
AAGCGGAAGTGGTGAAGGTG+TGG - tig0011252:7933-7952 None:intergenic 55.0%
GGAGGAAATGGAAGCGGAAG+TGG - tig0011252:7944-7963 None:intergenic 55.0%
GGAAGGGGAGGAAATGGAAG+CGG - tig0011252:7950-7969 None:intergenic 55.0%
TGGGACGGAGATTGGTGGAA+GGG - tig0011252:7966-7985 None:intergenic 55.0%
TTGGGACGGAGATTGGTGGA+AGG - tig0011252:7967-7986 None:intergenic 55.0%
GGAGGAAGAGAGGCGAGTTA+GGG - tig0011252:7995-8014 None:intergenic 55.0%
AGGAGGAAGAGAGGCGAGTT+AGG - tig0011252:7996-8015 None:intergenic 55.0%
GGTTGAGGAAGGAGGAAGAG+AGG - tig0011252:8005-8024 None:intergenic 55.0%
GATTGTGGAGGGGTTGAGGA+AGG - tig0011252:8016-8035 None:intergenic 55.0%
TGAGGTGGAGGATTGTGGAG+GGG - tig0011252:8026-8045 None:intergenic 55.0%
GTGAGGTGGAGGATTGTGGA+GGG - tig0011252:8027-8046 None:intergenic 55.0%
!! TTGGTTTGGAGGAAGGGGTG+AGG - tig0011252:8044-8063 None:intergenic 55.0%
!! GGTGGTTGGTTTGGAGGAAG+GGG - tig0011252:8049-8068 None:intergenic 55.0%
!! GTGGTGGTTGGTTTGGAGGA+AGG - tig0011252:8051-8070 None:intergenic 55.0%
!! TGGTTTTGCCATGGTCGACG+TGG - tig0011252:8155-8174 None:intergenic 55.0%
GAGAGCCATGGTAAGAGCAG+CGG - tig0011252:8184-8203 None:intergenic 55.0%
ACCATGGCTCTCGCTTCTCT+AGG + tig0011252:8192-8211 Msa1350130:CDS 55.0%
ACCTAGAGAAGCGAGAGCCA+TGG - tig0011252:8196-8215 None:intergenic 55.0%
!! GATTACCGGTGCTGCTCAGA+TGG + tig0011252:8371-8390 Msa1350130:CDS 55.0%
GCAGGACCAAGTGGATGATG+AGG + tig0011252:8759-8778 Msa1350130:CDS 55.0%
TGGTTCAGCGCTATTGGCGT+TGG + tig0011252:8864-8883 Msa1350130:CDS 55.0%
! ACGTGGTGATAACGAGTGGG+TGG + tig0011252:8915-8934 Msa1350130:CDS 55.0%
CCCCCTTTCAATTCTTCCGG+TGG - tig0011252:9064-9083 None:intergenic 55.0%
!! ACGAGGAGCACTACAGTGAC+CGG + tig0011252:9129-9148 Msa1350130:CDS 55.0%
!!! GGGATGGTTTTGGCTAAGCC+TGG + tig0011252:9246-9265 Msa1350130:CDS 55.0%
! GAGTCGAAGATGGTGATGCC+TGG + tig0011252:9432-9451 Msa1350130:CDS 55.0%
AGAGAAGGAGGGAAGACCGT+TGG + tig0011252:9525-9544 Msa1350130:CDS 55.0%
!!! ACTTTTGGAGTGACGCGCCG+CGG - tig0011252:7682-7701 None:intergenic 60.0%
! GTGAAGGTGTGGGTGTGTGG+TGG - tig0011252:7922-7941 None:intergenic 60.0%
! GTGGTGAAGGTGTGGGTGTG+TGG - tig0011252:7925-7944 None:intergenic 60.0%
ACGGAGATTGGTGGAAGGGG+AGG - tig0011252:7962-7981 None:intergenic 60.0%
GGGACGGAGATTGGTGGAAG+GGG - tig0011252:7965-7984 None:intergenic 60.0%
TGTGGAGGGGTTGAGGAAGG+AGG - tig0011252:8013-8032 None:intergenic 60.0%
GGAGGATTGTGGAGGGGTTG+AGG - tig0011252:8020-8039 None:intergenic 60.0%
GGTGAGGTGGAGGATTGTGG+AGG - tig0011252:8028-8047 None:intergenic 60.0%
AGGGGTGAGGTGGAGGATTG+TGG - tig0011252:8031-8050 None:intergenic 60.0%
GTTTGGAGGAAGGGGTGAGG+TGG - tig0011252:8041-8060 None:intergenic 60.0%
!! GCGAGTGGTGGTTGGTTTGG+AGG - tig0011252:8055-8074 None:intergenic 60.0%
! GGAGCGAGTGGTGGTTGGTT+TGG - tig0011252:8058-8077 None:intergenic 60.0%
GCTCCTGAAGAACGTGCTCG+TGG + tig0011252:8252-8271 Msa1350130:CDS 60.0%
!! ACCGGTGCTGCTCAGATGGA+CGG + tig0011252:8375-8394 Msa1350130:CDS 60.0%
! CTTGTTGTCTCCGGTGCCGA+TGG + tig0011252:8405-8424 Msa1350130:CDS 60.0%
AGGCATAGGACCATCGGCAC+CGG - tig0011252:8418-8437 None:intergenic 60.0%
GGTCGTGGAACAGTTGCCAC+CGG + tig0011252:9045-9064 Msa1350130:CDS 60.0%
GAGCACTACAGTGACCGGAG+TGG + tig0011252:9134-9153 Msa1350130:CDS 60.0%
!!! ACTTTTGGAGTGACGCGCCG+CGG - tig0011252:7682-7701 None:intergenic 60.0%
! GTGAAGGTGTGGGTGTGTGG+TGG - tig0011252:7922-7941 None:intergenic 60.0%
! GTGGTGAAGGTGTGGGTGTG+TGG - tig0011252:7925-7944 None:intergenic 60.0%
ACGGAGATTGGTGGAAGGGG+AGG - tig0011252:7962-7981 None:intergenic 60.0%
GGGACGGAGATTGGTGGAAG+GGG - tig0011252:7965-7984 None:intergenic 60.0%
TGTGGAGGGGTTGAGGAAGG+AGG - tig0011252:8013-8032 None:intergenic 60.0%
GGAGGATTGTGGAGGGGTTG+AGG - tig0011252:8020-8039 None:intergenic 60.0%
GGTGAGGTGGAGGATTGTGG+AGG - tig0011252:8028-8047 None:intergenic 60.0%
AGGGGTGAGGTGGAGGATTG+TGG - tig0011252:8031-8050 None:intergenic 60.0%
GTTTGGAGGAAGGGGTGAGG+TGG - tig0011252:8041-8060 None:intergenic 60.0%
!! GCGAGTGGTGGTTGGTTTGG+AGG - tig0011252:8055-8074 None:intergenic 60.0%
! GGAGCGAGTGGTGGTTGGTT+TGG - tig0011252:8058-8077 None:intergenic 60.0%
GCTCCTGAAGAACGTGCTCG+TGG + tig0011252:8252-8271 Msa1350130:CDS 60.0%
!! ACCGGTGCTGCTCAGATGGA+CGG + tig0011252:8375-8394 Msa1350130:CDS 60.0%
! CTTGTTGTCTCCGGTGCCGA+TGG + tig0011252:8405-8424 Msa1350130:CDS 60.0%
AGGCATAGGACCATCGGCAC+CGG - tig0011252:8418-8437 None:intergenic 60.0%
GGTCGTGGAACAGTTGCCAC+CGG + tig0011252:9045-9064 Msa1350130:CDS 60.0%
GAGCACTACAGTGACCGGAG+TGG + tig0011252:9134-9153 Msa1350130:CDS 60.0%
TGGAGGAAGGGGTGAGGTGG+AGG - tig0011252:8038-8057 None:intergenic 65.0%
GAAAGGGGAGGAGCGAGTGG+TGG - tig0011252:8067-8086 None:intergenic 65.0%
GGTGAAAGGGGAGGAGCGAG+TGG - tig0011252:8070-8089 None:intergenic 65.0%
CGAATTTGCCACGGGCGGCA+CGG - tig0011252:8095-8114 None:intergenic 65.0%
GCGCTCGAATTTGCCACGGG+CGG - tig0011252:8100-8119 None:intergenic 65.0%
ACCATCGGCCACGTCGACCA+TGG + tig0011252:8144-8163 Msa1350130:CDS 65.0%
GCCGTCCATCTGAGCAGCAC+CGG - tig0011252:8379-8398 None:intergenic 65.0%
GGAGGGAAGACCGTTGGAGC+TGG + tig0011252:9531-9550 Msa1350130:CDS 65.0%
TGGAGGAAGGGGTGAGGTGG+AGG - tig0011252:8038-8057 None:intergenic 65.0%
GAAAGGGGAGGAGCGAGTGG+TGG - tig0011252:8067-8086 None:intergenic 65.0%
GGTGAAAGGGGAGGAGCGAG+TGG - tig0011252:8070-8089 None:intergenic 65.0%
CGAATTTGCCACGGGCGGCA+CGG - tig0011252:8095-8114 None:intergenic 65.0%
GCGCTCGAATTTGCCACGGG+CGG - tig0011252:8100-8119 None:intergenic 65.0%
ACCATCGGCCACGTCGACCA+TGG + tig0011252:8144-8163 Msa1350130:CDS 65.0%
GCCGTCCATCTGAGCAGCAC+CGG - tig0011252:8379-8398 None:intergenic 65.0%
GGAGGGAAGACCGTTGGAGC+TGG + tig0011252:9531-9550 Msa1350130:CDS 65.0%
GGGGAGGAGCGAGTGGTGGT+TGG - tig0011252:8063-8082 None:intergenic 70.0%
GGCACGGACGGTGAAAGGGG+AGG - tig0011252:8079-8098 None:intergenic 70.0%
GGCGGCACGGACGGTGAAAG+GGG - tig0011252:8082-8101 None:intergenic 70.0%
GGGCGGCACGGACGGTGAAA+GGG - tig0011252:8083-8102 None:intergenic 70.0%
TTTGCCACGGGCGGCACGGA+CGG - tig0011252:8091-8110 None:intergenic 70.0%
GCCATGGTCGACGTGGCCGA+TGG - tig0011252:8148-8167 None:intergenic 70.0%
GGGGAGGAGCGAGTGGTGGT+TGG - tig0011252:8063-8082 None:intergenic 70.0%
GGCACGGACGGTGAAAGGGG+AGG - tig0011252:8079-8098 None:intergenic 70.0%
GGCGGCACGGACGGTGAAAG+GGG - tig0011252:8082-8101 None:intergenic 70.0%
GGGCGGCACGGACGGTGAAA+GGG - tig0011252:8083-8102 None:intergenic 70.0%
TTTGCCACGGGCGGCACGGA+CGG - tig0011252:8091-8110 None:intergenic 70.0%
GCCATGGTCGACGTGGCCGA+TGG - tig0011252:8148-8167 None:intergenic 70.0%
CGGGCGGCACGGACGGTGAA+AGG - tig0011252:8084-8103 None:intergenic 75.0%
TTCACCGTCCGTGCCGCCCG+TGG + tig0011252:8084-8103 Msa1350130:CDS 75.0%
CGGGCGGCACGGACGGTGAA+AGG - tig0011252:8084-8103 None:intergenic 75.0%
TTCACCGTCCGTGCCGCCCG+TGG + tig0011252:8084-8103 Msa1350130:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0011252 gene 7627 10034 7627 ID=Msa1350130;Name=Msa1350130
tig0011252 mRNA 7627 10034 7627 ID=Msa1350130-mRNA-1;Parent=Msa1350130;Name=Msa1350130-mRNA-1;_AED=0.00;_eAED=0.00;_QI=238|1|1|1|1|1|2|456|486
tig0011252 exon 7627 8470 7627 ID=Msa1350130-mRNA-1:exon:7259;Parent=Msa1350130-mRNA-1
tig0011252 exon 8724 10034 8724 ID=Msa1350130-mRNA-1:exon:7260;Parent=Msa1350130-mRNA-1
tig0011252 five_prime_UTR 7627 7864 7627 ID=Msa1350130-mRNA-1:five_prime_utr;Parent=Msa1350130-mRNA-1
tig0011252 CDS 7865 8470 7865 ID=Msa1350130-mRNA-1:cds;Parent=Msa1350130-mRNA-1
tig0011252 CDS 8724 9578 8724 ID=Msa1350130-mRNA-1:cds;Parent=Msa1350130-mRNA-1
tig0011252 three_prime_UTR 9579 10034 9579 ID=Msa1350130-mRNA-1:three_prime_utr;Parent=Msa1350130-mRNA-1
Gene Sequence

>Msa1350130

ATGGCAATTTCAATTTCTTCTTCATCTTCCACCAAACTCAAACTCTCACAACACCCACCACACACCCACACCTTCACCACTTCCGCTTCCATTTCCTCCCCTTCCACCAATCTCCGTCCCAAACTAACCCTAACTCGCCTCTCTTCCTCCTTCCTCAACCCCTCCACAATCCTCCACCTCACCCCTTCCTCCAAACCAACCACCACTCGCTCCTCCCCTTTCACCGTCCGTGCCGCCCGTGGCAAATTCGAGCGCAAAAAGCCTCATCTCAACATCGGAACCATCGGCCACGTCGACCATGGCAAAACCACTTTAACCGCTGCTCTTACCATGGCTCTCGCTTCTCTAGGTAACAGCGCCCCTAAAAAATACGATGAAATTGACGCTGCTCCTGAAGAACGTGCTCGTGGTATTACAATTAACACTGCTACTGTTGAATATGAGACTGAGACTCGTCATTATGCTCATGTTGATTGTCCCGGTCACGCTGATTATGTCAAGAATATGATTACCGGTGCTGCTCAGATGGACGGCGCTATTCTTGTTGTCTCCGGTGCCGATGGTCCTATGCCTCAAACCAAAGAACACATCCTTCTCGCTAAGCAGGTTGGTGTTCCGAGTGTGGTTGTGTTCTTGAACAAGCAGGACCAAGTGGATGATGAGGAGCTTCTTGAACTTGTGGAGCTTGAAGTTCGGGAGTTACTCTCGTCTTACGAATTTCCTGGAGATGACATTCCGATTGTTTCTGGTTCAGCGCTATTGGCGTTGGAAGCATTAGTGGCAAACCCTACTATTAAACGTGGTGATAACGAGTGGGTGGATAAGATTTATAAACTTATGGATGAAGTTGACAACTATATACCAATCCCTCAAAGACAAACAGATCTCCCCTTTTTGCTAGCAATTGAGGATGTGTTTTCAATCACTGGTCGTGGAACAGTTGCCACCGGAAGAATTGAAAGGGGGCTTGTTAAGGTTGGTGATGTAGTTGACCTTGTTGGTTTGAGGGAAACGAGGAGCACTACAGTGACCGGAGTGGAAATGTTTCAGAAGATTTTGGACGATGCTATGGCTGGTGATAACGTGGGTTTGTTGCTGAGAGGTGTTCAGAAGATTGATATTCAAAGAGGGATGGTTTTGGCTAAGCCTGGAACTATCACTCCTCACTCTAAGTTTGAATGTATTGTGTATGTTTTGAAGAAGGAAGAAGGTGGAAGACATTCACCTTTCTTTGCTGGTTATAGGCCTCAGTTTTACATGAGAACCACAGATGTTACCGGAAAAGTTACATCTATCATGAATGACAAGGATGAGGAGTCGAAGATGGTGATGCCTGGTGATCGTGTTAAGATGGTGGTTGAACTCATTGTCCCTGTGGCTATTGAACAAGGAATGAGGTTTGCTATTAGAGAAGGAGGGAAGACCGTTGGAGCTGGTGTTATCGGAGCTATCATTGAGTGA
Protein sequence

>Msa1350130

MAISISSSSSTKLKLSQHPPHTHTFTTSASISSPSTNLRPKLTLTRLSSSFLNPSTILHLTPSSKPTTTRSSPFTVRAARGKFERKKPHLNIGTIGHVDHGKTTLTAALTMALASLGNSAPKKYDEIDAAPEERARGITINTATVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPSVVVFLNKQDQVDDEELLELVELEVRELLSSYEFPGDDIPIVSGSALLALEALVANPTIKRGDNEWVDKIYKLMDEVDNYIPIPQRQTDLPFLLAIEDVFSITGRGTVATGRIERGLVKVGDVVDLVGLRETRSTTVTGVEMFQKILDDAMAGDNVGLLLRGVQKIDIQRGMVLAKPGTITPHSKFECIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKMVMPGDRVKMVVELIVPVAIEQGMRFAIREGGKTVGAGVIGAIIE*