AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1317090


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1317090 MtrunA17_Chr8g0347221 93.644 472 13 2 1 456 1 471 0.0 863
Msa1317090 MtrunA17_Chr7g0249921 36.994 173 100 3 86 253 95 263 7.90e-28 114
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1317090 AT4G01050.1 57.783 469 173 12 1 457 1 456 2.72e-150 436
Msa1317090 AT4G01050.2 57.783 469 173 12 1 457 42 497 1.13e-149 436
Msa1317090 AT3G25480.1 36.686 169 105 1 79 247 63 229 1.94e-27 110

Find 125 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGCTTTCTTTGAAGTTTA+AGG 0.087089 8_4:+18132822 Msa1317090:CDS
TTTGTCTCGGGGACAATTTC+AGG 0.169954 8_4:-18135500 None:intergenic
TTTGTCTCGGGGACAATTTC+AGG 0.169954 8_4:-18135548 None:intergenic
TTGATACATACTGAGTATTT+TGG 0.174722 8_4:-18136311 None:intergenic
TAAATCTGCTTATGCAATTA+AGG 0.182748 8_4:+18133603 Msa1317090:CDS
TCCAAGCTCAATGCTTTCTT+TGG 0.236005 8_4:-18133769 None:intergenic
TTCGGCACAGAGTTTATTTC+AGG 0.250133 8_4:-18135596 None:intergenic
AAAGCATTGAGCTTGGATTT+TGG 0.280576 8_4:+18133775 Msa1317090:CDS
CTCTCAAAATTTGCAACTTA+AGG 0.300232 8_4:-18132182 None:intergenic
CTTGGGATTGCTGCAGCTAC+TGG 0.311101 8_4:+18134148 Msa1317090:CDS
GGTGGTGACATTGATGTTAA+TGG 0.311965 8_4:+18132505 Msa1317090:CDS
TGCTGGTGGTGTAGCTATAT+TGG 0.312430 8_4:+18132576 Msa1317090:CDS
GGACAATCTCCTAGTGCTTC+TGG 0.321123 8_4:+18132481 Msa1317090:CDS
TTAGTAAGGCATTTAACTTT+TGG 0.355177 8_4:+18136657 Msa1317090:three_prime_UTR
TATGTTGATTCATGAGAGTT+TGG 0.360585 8_4:+18136632 Msa1317090:three_prime_UTR
GATGGCTTGGCCGTTACTCT+TGG 0.362120 8_4:+18134130 Msa1317090:CDS
AAGCAGATTTAAATCCGTTA+AGG 0.366536 8_4:-18133591 None:intergenic
ACACCACCAGCAAGAATTAC+AGG 0.373462 8_4:-18132565 None:intergenic
TTGTGGAATGAGTGGCAAAA+TGG 0.375345 8_4:-18132084 None:intergenic
ATTTCATCAGCAAGCTCCTT+AGG 0.379190 8_4:-18135195 None:intergenic
ATGATGAGTTTGTTTCTTTG+TGG 0.384751 8_4:-18132101 None:intergenic
TTAACATATGAAGAAGCATT+AGG 0.389426 8_4:+18132460 Msa1317090:CDS
GGAGCTTGCTGATGAAATAA+AGG 0.391508 8_4:+18135200 Msa1317090:CDS
AGATGAAGGAGGTTTGAAAT+CGG 0.392959 8_4:-18136221 None:intergenic
CTGGCAGGATTATAGATTGT+AGG 0.394531 8_4:-18136350 None:intergenic
TTCTTCAAACCACCAACATT+TGG 0.394999 8_4:-18132748 None:intergenic
AGCAGATTTAAATCCGTTAA+GGG 0.402051 8_4:-18133590 None:intergenic
AGTAAAAGAATGTGTTGTTT+TGG 0.402239 8_4:-18132036 None:intergenic
GCTCAGTTGCTTGATATAAG+AGG 0.403750 8_4:+18132697 Msa1317090:CDS
GGGTATGGTGAAAGTGGTTT+AGG 0.407461 8_4:-18135653 None:intergenic
GTATGTTGAAGATGTTCTTC+TGG 0.410590 8_4:-18136369 None:intergenic
ATGAGAGTTTGGATTTAGTA+AGG 0.410994 8_4:+18136643 Msa1317090:three_prime_UTR
ATGGCTTGGCCGTTACTCTT+GGG 0.412279 8_4:+18134131 Msa1317090:CDS
ATGAAATTTAGAAGCTCAAA+GGG 0.415470 8_4:-18132152 None:intergenic
GTGAAACTCTAGGGCTTTGA+AGG 0.419099 8_4:-18136250 None:intergenic
GAGAACCCTGTAATTCTTGC+TGG 0.420485 8_4:+18132559 Msa1317090:CDS
GCAGAGTTAGTTACCCTTAA+CGG 0.420544 8_4:+18133577 Msa1317090:CDS
GAACACCAAGGTTGCTCCTA+AGG 0.431093 8_4:+18135179 Msa1317090:CDS
GAAACAATTCTCCAACTTGT+AGG 0.431254 8_4:+18134302 Msa1317090:CDS
AGCTATATTGGCAGTGCCAT+TGG 0.432928 8_4:+18132588 Msa1317090:CDS
TCAGTGGCAGTAACTTATAA+AGG 0.436972 8_4:+18132775 Msa1317090:CDS
GATTCAACACCCCAAGCCTT+AGG 0.440084 8_4:-18132634 None:intergenic
GGGTTTGGTGTGTAATGCAA+TGG 0.441968 8_4:-18132012 None:intergenic
TGCAGAATAGTGGTCTTCCT+TGG 0.441992 8_4:+18133740 Msa1317090:intron
CTTCAACATACATGAAACTT+AGG 0.443694 8_4:+18136381 Msa1317090:three_prime_UTR
GATTGCTGCAGCTACTGGAT+TGG 0.443820 8_4:+18134153 Msa1317090:CDS
GTTGAAGATGTTCTTCTGGC+AGG 0.447489 8_4:-18136365 None:intergenic
GAAGGAGATGGAGATGAAGG+AGG 0.453134 8_4:-18136232 None:intergenic
ATTGCTGCAGCTACTGGATT+GGG 0.454710 8_4:+18134154 Msa1317090:CDS
ACAGAGTTTATTTCAGGAGC+AGG 0.455724 8_4:-18135590 None:intergenic
TCTCCTAGTGCTTCTGGTGG+TGG 0.456230 8_4:+18132487 Msa1317090:CDS
GTGATGGAAGCCAGATTTGA+TGG 0.456441 8_4:+18133538 Msa1317090:intron
GTCTTATTGTTGGCGGAGGT+TGG 0.461800 8_4:-18135404 None:intergenic
GATGAAGGAGGTTTGAAATC+GGG 0.461874 8_4:-18136220 None:intergenic
ATGAACAATGTAGTATTCTC+AGG 0.471873 8_4:-18132847 None:intergenic
TATAAAGGTGATGATAAGCC+AGG 0.475049 8_4:+18132790 Msa1317090:CDS
CCGCCAGCTGTAGCAAGCTC+TGG 0.476058 8_4:-18135452 None:intergenic
TGCAGGGAGAGTCTTATTGT+TGG 0.480706 8_4:-18135414 None:intergenic
ATTTGATGGGAACTCTGAAC+TGG 0.481515 8_4:+18133552 Msa1317090:CDS
TTTGAAGGAGATGGAGATGA+AGG 0.482325 8_4:-18136235 None:intergenic
CTCTAGGGCTTTGAAGGAGA+TGG 0.485058 8_4:-18136244 None:intergenic
GGTTTGGTGTGTAATGCAAT+GGG 0.486379 8_4:-18132011 None:intergenic
AGTCCAGAGCTTGCTACAGC+TGG 0.490256 8_4:+18135449 Msa1317090:CDS
ACCAAAGAAAGCATTGAGCT+TGG 0.491928 8_4:+18133768 Msa1317090:CDS
TCTTGAATTCTGCAGAATAG+TGG 0.495443 8_4:+18133730 Msa1317090:intron
CATTGGACCAACCTCAGAAA+AGG 0.496352 8_4:-18134185 None:intergenic
TAGTGAGTGGCACAAATGTA+AGG 0.501426 8_4:-18136462 None:intergenic
TGTGCCGAAAACTGAAACAA+AGG 0.505309 8_4:+18135610 Msa1317090:CDS
GCTTTCTTTGGTTCAGTCCA+AGG 0.508994 8_4:-18133757 None:intergenic
AGGGAGAGTCTTATTGTTGG+CGG 0.519173 8_4:-18135411 None:intergenic
GATACTATCAATGATGCAAT+CGG 0.519921 8_4:+18133808 Msa1317090:CDS
TGTAGTACAAAATTATGCTA+TGG 0.521992 8_4:+18132219 Msa1317090:exon
GAAAGTGGTTTAGGCTGCAC+AGG 0.522973 8_4:-18135644 None:intergenic
TATGACATTACATATGGGTA+TGG 0.525499 8_4:-18135668 None:intergenic
CTTCGTACAAGTGAAACTCT+AGG 0.528032 8_4:-18136260 None:intergenic
ACATATGGGTATGGTGAAAG+TGG 0.528445 8_4:-18135659 None:intergenic
TGTGGAATGAGTGGCAAAAT+GGG 0.530600 8_4:-18132083 None:intergenic
AATTTAGAAGCTCAAAGGGT+TGG 0.532878 8_4:-18132148 None:intergenic
CATGAAATTTAGAAGCTCAA+AGG 0.535206 8_4:-18132153 None:intergenic
TTCTGTCAGATAGCACAGAA+AGG 0.535964 8_4:-18132270 None:intergenic
GCAATTAAGGATGGTGCAGA+AGG 0.540296 8_4:+18133616 Msa1317090:CDS
TCTGTCAGATAGCACAGAAA+GGG 0.542853 8_4:-18132269 None:intergenic
TTGACTGAGATTAGACAAGT+TGG 0.542880 8_4:+18132721 Msa1317090:CDS
AGAAGGACCACAAGGATGGC+AGG 0.544881 8_4:+18133633 Msa1317090:CDS
AAGCTCCTTAGGAGCAACCT+TGG 0.546190 8_4:-18135184 None:intergenic
ATTGCAGGAATCTGATGGCT+TGG 0.548308 8_4:+18134117 Msa1317090:intron
ACTGAGATTAGACAAGTTGG+TGG 0.549104 8_4:+18132724 Msa1317090:CDS
TACGAAGAGAATTCTATAGC+AGG 0.550738 8_4:+18136276 Msa1317090:three_prime_UTR
GGTAAAAGTAGTAGAATTGA+GGG 0.556037 8_4:-18132245 None:intergenic
TTCCGGGAAAATTAGGACAT+CGG 0.564881 8_4:+18135368 Msa1317090:intron
TGATTGTGAACATTGTGTTG+TGG 0.565253 8_4:+18136496 Msa1317090:three_prime_UTR
GGGTAAAAGTAGTAGAATTG+AGG 0.566641 8_4:-18132246 None:intergenic
ATGCAAAATTAGGTGCTGAT+GGG 0.571276 8_4:+18132671 Msa1317090:CDS
TATGCAAAATTAGGTGCTGA+TGG 0.573919 8_4:+18132670 Msa1317090:CDS
GAGAGTCTTATTGTTGGCGG+AGG 0.576633 8_4:-18135408 None:intergenic
TGATGGAAGCCAGATTTGAT+GGG 0.580060 8_4:+18133539 Msa1317090:intron
TTCGTACAAGTGAAACTCTA+GGG 0.581063 8_4:-18136259 None:intergenic
TTGCAGCTGATCCTACAAGT+TGG 0.583303 8_4:-18134313 None:intergenic
CAAGAAGCTTCTATTTGCTG+AGG 0.588875 8_4:+18134352 Msa1317090:CDS
TTGTTTCTTTGTGGAATGAG+TGG 0.592557 8_4:-18132092 None:intergenic
AACCCTGTAATTCTTGCTGG+TGG 0.593908 8_4:+18132562 Msa1317090:CDS
TCTGCTTATGCAATTAAGGA+TGG 0.593981 8_4:+18133607 Msa1317090:CDS
TTGTGAACATTGTGTTGTGG+AGG 0.597009 8_4:+18136499 Msa1317090:three_prime_UTR
GTGCAGAAGGACCACAAGGA+TGG 0.597232 8_4:+18133629 Msa1317090:CDS
GGTTGATTGCAGGAATCTGA+TGG 0.599719 8_4:+18134112 Msa1317090:intron
CCAGAGCTTGCTACAGCTGG+CGG 0.602467 8_4:+18135452 Msa1317090:CDS
GTCAGATAGCACAGAAAGGG+GGG 0.603525 8_4:-18132266 None:intergenic
TGCAGCAATCCCAAGAGTAA+CGG 0.604148 8_4:-18134140 None:intergenic
GTTGGTGGACCAAATGTTGG+TGG 0.607555 8_4:+18132739 Msa1317090:CDS
AGTACAAAATTATGCTATGG+AGG 0.608891 8_4:+18132222 Msa1317090:exon
CTGTCAGATAGCACAGAAAG+GGG 0.611761 8_4:-18132268 None:intergenic
AAAATCTGAGACAAAACCAA+TGG 0.614076 8_4:-18132604 None:intergenic
TCACCACCACCAGAAGCACT+AGG 0.618550 8_4:-18132490 None:intergenic
TGTACTACAGAAAGTTTGTG+AGG 0.620051 8_4:-18132205 None:intergenic
ATAAATACCTGCCATCCTTG+TGG 0.630600 8_4:-18133640 None:intergenic
ATAAAGGTGATGATAAGCCA+GGG 0.631344 8_4:+18132791 Msa1317090:CDS
CACCACCAGCAAGAATTACA+GGG 0.636596 8_4:-18132564 None:intergenic
TGTCAGATAGCACAGAAAGG+GGG 0.640656 8_4:-18132267 None:intergenic
CAAGTTGGTGGACCAAATGT+TGG 0.652710 8_4:+18132736 Msa1317090:CDS
CAATCTCCTAGTGCTTCTGG+TGG 0.655117 8_4:+18132484 Msa1317090:CDS
GATGGTGCAGAAGGACCACA+AGG 0.670156 8_4:+18133625 Msa1317090:CDS
TGGTTTGAAGAAGAAATCAG+TGG 0.684337 8_4:+18132759 Msa1317090:CDS
TCAGTTGTGAATGTTAACAA+TGG 0.693297 8_4:+18132421 Msa1317090:CDS
GGAAAATTAGGACATCGGAA+AGG 0.694122 8_4:+18135373 Msa1317090:intron
TAATGCAATGGGTGACACTG+AGG 0.732068 8_4:-18132000 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTCTTAAATTATTATTAG+TGG + chr8_4:18133158-18133177 Msa1317090:intron 10.0%
!!! TATTCTTTAATTTAATAGAA+GGG - chr8_4:18133937-18133956 None:intergenic 10.0%
!! TATTAAATTAAAGAATACTA+TGG + chr8_4:18133940-18133959 Msa1317090:intron 10.0%
!! AACAATAATAATAAATGAAA+AGG + chr8_4:18134817-18134836 Msa1317090:intron 10.0%
!!! TCATTAAATTTTTAATTTGA+TGG + chr8_4:18135115-18135134 Msa1317090:intron 10.0%
!!! TTTATCAAAGAATTTTCAAA+AGG + chr8_4:18132378-18132397 Msa1317090:CDS 15.0%
!!! TTATCAAAGAATTTTCAAAA+GGG + chr8_4:18132379-18132398 Msa1317090:CDS 15.0%
!!! GTATTCTTTAATTTAATAGA+AGG - chr8_4:18133938-18133957 None:intergenic 15.0%
!! ATAAATTATTATGTTTGTGT+CGG + chr8_4:18134588-18134607 Msa1317090:intron 15.0%
!!! TTAATATTGTTTTCTTTGAA+TGG + chr8_4:18135342-18135361 Msa1317090:intron 15.0%
!!! TTATTTTCTCAAATTATTGT+CGG + chr8_4:18136049-18136068 Msa1317090:intron 15.0%
!! ACATGAATATAAAACAAAAT+TGG - chr8_4:18136159-18136178 None:intergenic 15.0%
!! AAAAATGCTTATGCAAAATT+AGG + chr8_4:18132661-18132680 Msa1317090:CDS 20.0%
!! TATATCATAATTCATAAGCA+TGG - chr8_4:18132940-18132959 None:intergenic 20.0%
!! TAACTGTGATATAGAAAAAT+TGG + chr8_4:18133031-18133050 Msa1317090:intron 20.0%
!! TGAGTGTTTATAATTAATGT+CGG + chr8_4:18134091-18134110 Msa1317090:intron 20.0%
!! ATAAACATACAACAGAAAAA+TGG - chr8_4:18134465-18134484 None:intergenic 20.0%
!!! ATATATGAGTTAGTTTTGTA+AGG + chr8_4:18134547-18134566 Msa1317090:intron 20.0%
!!! TATATGAGTTAGTTTTGTAA+GGG + chr8_4:18134548-18134567 Msa1317090:intron 20.0%
!!! TTGAATTTCTTTTACCTATT+TGG - chr8_4:18134660-18134679 None:intergenic 20.0%
!! TAGGTAAAAGAAATTCAAAA+TGG + chr8_4:18134662-18134681 Msa1317090:intron 20.0%
!! TAAGATTAATCCAATTATAG+AGG - chr8_4:18134722-18134741 None:intergenic 20.0%
!! CTATAATTGGATTAATCTTA+CGG + chr8_4:18134722-18134741 Msa1317090:intron 20.0%
!!! TATAAGATCATATCTTTTTC+AGG - chr8_4:18134784-18134803 None:intergenic 20.0%
!!! TAAATTTTTAATTTGATGGC+AGG + chr8_4:18135119-18135138 Msa1317090:intron 20.0%
!! AAAACAATATTAAACAGGAA+GGG - chr8_4:18135335-18135354 None:intergenic 20.0%
!! CAAAGAAAACAATATTAAAC+AGG - chr8_4:18135340-18135359 None:intergenic 20.0%
!! GAAATTATGACATTACATAT+GGG - chr8_4:18135676-18135695 None:intergenic 20.0%
!! TGAAATTATGACATTACATA+TGG - chr8_4:18135677-18135696 None:intergenic 20.0%
!! ATCCAAAAATCTATCAAATA+GGG - chr8_4:18135794-18135813 None:intergenic 20.0%
!! GATGAAATACTTAATGAAAT+AGG + chr8_4:18135966-18135985 Msa1317090:intron 20.0%
!!! AGTAAAAGAATGTGTTGTTT+TGG - chr8_4:18132039-18132058 None:intergenic 25.0%
! ATGAAATTTAGAAGCTCAAA+GGG - chr8_4:18132155-18132174 None:intergenic 25.0%
! TGTAGTACAAAATTATGCTA+TGG + chr8_4:18132219-18132238 Msa1317090:exon 25.0%
!!! TTAACATATGAAGAAGCATT+AGG + chr8_4:18132460-18132479 Msa1317090:CDS 25.0%
!!! TCAGATTTTGAAAAAACCTA+AGG + chr8_4:18132618-18132637 Msa1317090:CDS 25.0%
!!! CAATTTTATTTGCAGCATTT+TGG + chr8_4:18132896-18132915 Msa1317090:intron 25.0%
! GAAAAATTGGAAGATAAGTT+AGG + chr8_4:18133044-18133063 Msa1317090:intron 25.0%
! TTGAATGTAATCACATATGT+TGG - chr8_4:18133130-18133149 None:intergenic 25.0%
! TAAATCTGCTTATGCAATTA+AGG + chr8_4:18133603-18133622 Msa1317090:CDS 25.0%
! ATTTGAGCTTTCTCAAATTA+AGG + chr8_4:18133995-18134014 Msa1317090:intron 25.0%
! TATTATTGCATGTTGAGAAA+AGG - chr8_4:18134226-18134245 None:intergenic 25.0%
! CAACATGCAATAATACATTA+TGG + chr8_4:18134231-18134250 Msa1317090:intron 25.0%
!!! ATATGAGTTAGTTTTGTAAG+GGG + chr8_4:18134549-18134568 Msa1317090:intron 25.0%
! ATTAAGTGAAATAGGTAAAC+AGG + chr8_4:18134619-18134638 Msa1317090:intron 25.0%
!! AAGTTAATTTTGTGCCAAAT+AGG + chr8_4:18134643-18134662 Msa1317090:intron 25.0%
! ATTACATAAACAAGAAGAGT+TGG + chr8_4:18134875-18134894 Msa1317090:intron 25.0%
!!! GAAACTTATTGCTTTTCTAA+TGG - chr8_4:18134940-18134959 None:intergenic 25.0%
! GAAAACAATATTAAACAGGA+AGG - chr8_4:18135336-18135355 None:intergenic 25.0%
!! TTTTCTTTGAATGGAATTTC+CGG + chr8_4:18135351-18135370 Msa1317090:intron 25.0%
! GATCCAAAAATCTATCAAAT+AGG - chr8_4:18135795-18135814 None:intergenic 25.0%
! TTAATTGAACGTAACTACAT+GGG - chr8_4:18136028-18136047 None:intergenic 25.0%
! ATTAATTGAACGTAACTACA+TGG - chr8_4:18136029-18136048 None:intergenic 25.0%
!! TTGATACATACTGAGTATTT+TGG - chr8_4:18136314-18136333 None:intergenic 25.0%
! AATGTTCACAATCACAAAAA+AGG - chr8_4:18136490-18136509 None:intergenic 25.0%
!!! TTAGTAAGGCATTTAACTTT+TGG + chr8_4:18136657-18136676 Msa1317090:three_prime_UTR 25.0%
!!! AAAGAATGTGTTGTTTTGGT+GGG - chr8_4:18132035-18132054 None:intergenic 30.0%
!!! AAAAGAATGTGTTGTTTTGG+TGG - chr8_4:18132036-18132055 None:intergenic 30.0%
! ATGATGAGTTTGTTTCTTTG+TGG - chr8_4:18132104-18132123 None:intergenic 30.0%
CATGAAATTTAGAAGCTCAA+AGG - chr8_4:18132156-18132175 None:intergenic 30.0%
CTCTCAAAATTTGCAACTTA+AGG - chr8_4:18132185-18132204 None:intergenic 30.0%
AGTACAAAATTATGCTATGG+AGG + chr8_4:18132222-18132241 Msa1317090:exon 30.0%
GGTAAAAGTAGTAGAATTGA+GGG - chr8_4:18132248-18132267 None:intergenic 30.0%
! CTTTGCATGAAAATTTTGTG+GGG - chr8_4:18132309-18132328 None:intergenic 30.0%
! GCTTTGCATGAAAATTTTGT+GGG - chr8_4:18132310-18132329 None:intergenic 30.0%
! AGCTTTGCATGAAAATTTTG+TGG - chr8_4:18132311-18132330 None:intergenic 30.0%
TCAGTTGTGAATGTTAACAA+TGG + chr8_4:18132421-18132440 Msa1317090:CDS 30.0%
!! GGTTTTGTAGATAGTGTTAT+AGG + chr8_4:18132526-18132545 Msa1317090:CDS 30.0%
! AAAATCTGAGACAAAACCAA+TGG - chr8_4:18132607-18132626 None:intergenic 30.0%
!! TTTTGAAAAAACCTAAGGCT+TGG + chr8_4:18132623-18132642 Msa1317090:CDS 30.0%
TTTGAAAAAACCTAAGGCTT+GGG + chr8_4:18132624-18132643 Msa1317090:CDS 30.0%
!! GAAGCTTTCTTTGAAGTTTA+AGG + chr8_4:18132822-18132841 Msa1317090:CDS 30.0%
ATGAACAATGTAGTATTCTC+AGG - chr8_4:18132850-18132869 None:intergenic 30.0%
TTGTTCATTCTTGACAAGTA+AGG + chr8_4:18132862-18132881 Msa1317090:intron 30.0%
! TTGATCATTACTTCAGCTTT+TGG - chr8_4:18133276-18133295 None:intergenic 30.0%
! AATGACCACAATTTTCTGTT+TGG + chr8_4:18133298-18133317 Msa1317090:intron 30.0%
TTTCACCAAACAGAAAATTG+TGG - chr8_4:18133306-18133325 None:intergenic 30.0%
! CGTAATTTGACTTAACATGT+GGG + chr8_4:18133438-18133457 Msa1317090:intron 30.0%
! GTAATTTGACTTAACATGTG+GGG + chr8_4:18133439-18133458 Msa1317090:intron 30.0%
AGCAGATTTAAATCCGTTAA+GGG - chr8_4:18133593-18133612 None:intergenic 30.0%
AAGCAGATTTAAATCCGTTA+AGG - chr8_4:18133594-18133613 None:intergenic 30.0%
! TTGGCGAAGATAGAAAATTT+TGG - chr8_4:18133692-18133711 None:intergenic 30.0%
AATATGTGATGTGAGTGTAT+TGG - chr8_4:18133711-18133730 None:intergenic 30.0%
GATACTATCAATGATGCAAT+CGG + chr8_4:18133808-18133827 Msa1317090:CDS 30.0%
GGCAATAAGTAATAACTCAT+TGG - chr8_4:18134205-18134224 None:intergenic 30.0%
!! GTAAGTTTGTTTTTCTATGC+AGG + chr8_4:18134374-18134393 Msa1317090:intron 30.0%
AACATACAACAGAAAAATGG+TGG - chr8_4:18134462-18134481 None:intergenic 30.0%
TAATTTACACTCTCGTGTTA+TGG - chr8_4:18134525-18134544 None:intergenic 30.0%
AATTATTATGTTTGTGTCGG+TGG + chr8_4:18134591-18134610 Msa1317090:intron 30.0%
TGGCTAAGATTAAGTGAAAT+AGG + chr8_4:18134611-18134630 Msa1317090:intron 30.0%
ACCAACAATACCTCTATAAT+TGG + chr8_4:18134709-18134728 Msa1317090:intron 30.0%
!! TCCAATTATAGAGGTATTGT+TGG - chr8_4:18134713-18134732 None:intergenic 30.0%
GAAGTAAACATAAGCAAACA+CGG - chr8_4:18134975-18134994 None:intergenic 30.0%
ATATGCAATGATCTTCCTAA+TGG + chr8_4:18135023-18135042 Msa1317090:intron 30.0%
AAATGTTCTTCACTACCATT+AGG - chr8_4:18135041-18135060 None:intergenic 30.0%
!!! CTTGTTTTAGTGTTTTCTTC+CGG - chr8_4:18135146-18135165 None:intergenic 30.0%
! TAATGAGTTTTTGAACACCA+AGG + chr8_4:18135167-18135186 Msa1317090:CDS 30.0%
GCTCTTGCAACTAATTTATA+AGG - chr8_4:18135252-18135271 None:intergenic 30.0%
TTTCTTTGAATGGAATTTCC+GGG + chr8_4:18135352-18135371 Msa1317090:intron 30.0%
TATGACATTACATATGGGTA+TGG - chr8_4:18135671-18135690 None:intergenic 30.0%
AAAAATCTATCAAATAGGGC+TGG - chr8_4:18135790-18135809 None:intergenic 30.0%
! AGCCCTATTTGATAGATTTT+TGG + chr8_4:18135789-18135808 Msa1317090:intron 30.0%
ATCCTTTACTTCACATACTT+AGG - chr8_4:18135826-18135845 None:intergenic 30.0%
TATGTGTAATTGCAAAATGC+AGG - chr8_4:18135911-18135930 None:intergenic 30.0%
! CATCCTTTTCTTGCAAAAAT+GGG - chr8_4:18135950-18135969 None:intergenic 30.0%
! TCATCCTTTTCTTGCAAAAA+TGG - chr8_4:18135951-18135970 None:intergenic 30.0%
CTTCAACATACATGAAACTT+AGG + chr8_4:18136381-18136400 Msa1317090:three_prime_UTR 30.0%
!!! TCAGTTTTGAATAAGCAACA+AGG + chr8_4:18136587-18136606 Msa1317090:three_prime_UTR 30.0%
!! TATGTTGATTCATGAGAGTT+TGG + chr8_4:18136632-18136651 Msa1317090:three_prime_UTR 30.0%
ATGAGAGTTTGGATTTAGTA+AGG + chr8_4:18136643-18136662 Msa1317090:three_prime_UTR 30.0%
ATGGGAGAAGATAGAAAAAG+AGG - chr8_4:18132068-18132087 None:intergenic 35.0%
! TTGTTTCTTTGTGGAATGAG+TGG - chr8_4:18132095-18132114 None:intergenic 35.0%
AATTTAGAAGCTCAAAGGGT+TGG - chr8_4:18132151-18132170 None:intergenic 35.0%
TGTACTACAGAAAGTTTGTG+AGG - chr8_4:18132208-18132227 None:intergenic 35.0%
GGGTAAAAGTAGTAGAATTG+AGG - chr8_4:18132249-18132268 None:intergenic 35.0%
TTGAAAAAACCTAAGGCTTG+GGG + chr8_4:18132625-18132644 Msa1317090:CDS 35.0%
!! TATGCAAAATTAGGTGCTGA+TGG + chr8_4:18132670-18132689 Msa1317090:CDS 35.0%
!! ATGCAAAATTAGGTGCTGAT+GGG + chr8_4:18132671-18132690 Msa1317090:CDS 35.0%
TTGACTGAGATTAGACAAGT+TGG + chr8_4:18132721-18132740 Msa1317090:CDS 35.0%
TTCTTCAAACCACCAACATT+TGG - chr8_4:18132751-18132770 None:intergenic 35.0%
TGGTTTGAAGAAGAAATCAG+TGG + chr8_4:18132759-18132778 Msa1317090:CDS 35.0%
TCAGTGGCAGTAACTTATAA+AGG + chr8_4:18132775-18132794 Msa1317090:CDS 35.0%
TATAAAGGTGATGATAAGCC+AGG + chr8_4:18132790-18132809 Msa1317090:CDS 35.0%
ATAAAGGTGATGATAAGCCA+GGG + chr8_4:18132791-18132810 Msa1317090:CDS 35.0%
CACATATGTTGGTATCATGT+CGG - chr8_4:18133119-18133138 None:intergenic 35.0%
ATTGATGTCAGTGTTGTATC+CGG + chr8_4:18133187-18133206 Msa1317090:intron 35.0%
TTCATAGTCCAAATGAGTGT+AGG + chr8_4:18133225-18133244 Msa1317090:intron 35.0%
TCATAGTCCAAATGAGTGTA+GGG + chr8_4:18133226-18133245 Msa1317090:intron 35.0%
TACATAGGCTATGTTCTTTG+AGG + chr8_4:18133357-18133376 Msa1317090:intron 35.0%
! GCGTAATTTGACTTAACATG+TGG + chr8_4:18133437-18133456 Msa1317090:intron 35.0%
TCTGCTTATGCAATTAAGGA+TGG + chr8_4:18133607-18133626 Msa1317090:CDS 35.0%
TCTTGAATTCTGCAGAATAG+TGG + chr8_4:18133730-18133749 Msa1317090:intron 35.0%
!!! AAAGCATTGAGCTTGGATTT+TGG + chr8_4:18133775-18133794 Msa1317090:CDS 35.0%
! TTTTCAGACTGCAAAACAGT+TGG + chr8_4:18133906-18133925 Msa1317090:intron 35.0%
! AGGATTTTTGCAAGCAAGAA+AGG + chr8_4:18134015-18134034 Msa1317090:intron 35.0%
! GGATTTTTGCAAGCAAGAAA+GGG + chr8_4:18134016-18134035 Msa1317090:intron 35.0%
! AATTAATGTCGGTTGATTGC+AGG + chr8_4:18134102-18134121 Msa1317090:intron 35.0%
CGTGACATTACTCTATTTGT+AGG + chr8_4:18134277-18134296 Msa1317090:intron 35.0%
GAAACAATTCTCCAACTTGT+AGG + chr8_4:18134302-18134321 Msa1317090:CDS 35.0%
!! GTTTGTTTTTCTATGCAGGA+TGG + chr8_4:18134378-18134397 Msa1317090:intron 35.0%
!! TTATAGAGGTATTGTTGGTG+AGG - chr8_4:18134708-18134727 None:intergenic 35.0%
! TCTTACGGTTTAAGTGTTGT+TGG + chr8_4:18134737-18134756 Msa1317090:intron 35.0%
!!! TTTTAATTTGATGGCAGGAC+CGG + chr8_4:18135124-18135143 Msa1317090:intron 35.0%
ATGGAATTTCCGGGAAAATT+AGG + chr8_4:18135361-18135380 Msa1317090:intron 35.0%
!! TGATGCTTCTACTTTTGTCT+CGG - chr8_4:18135564-18135583 None:intergenic 35.0%
!! TCTGCCTTTGTTTCAGTTTT+CGG - chr8_4:18135617-18135636 None:intergenic 35.0%
TTACTTCACATACTTAGGCA+GGG - chr8_4:18135821-18135840 None:intergenic 35.0%
TTTACTTCACATACTTAGGC+AGG - chr8_4:18135822-18135841 None:intergenic 35.0%
TGCCTAAGTATGTGAAGTAA+AGG + chr8_4:18135821-18135840 Msa1317090:intron 35.0%
CTTCTGCCTAAGTATGTAAT+TGG - chr8_4:18135855-18135874 None:intergenic 35.0%
!! AGTCCCATTTTTGCAAGAAA+AGG + chr8_4:18135944-18135963 Msa1317090:intron 35.0%
ATGAAATAGGAGACAATGTC+CGG + chr8_4:18135979-18135998 Msa1317090:intron 35.0%
TACTGCAAGTCAAAAAAGAG+AGG - chr8_4:18136199-18136218 None:intergenic 35.0%
! AGATGAAGGAGGTTTGAAAT+CGG - chr8_4:18136224-18136243 None:intergenic 35.0%
TTCGTACAAGTGAAACTCTA+GGG - chr8_4:18136262-18136281 None:intergenic 35.0%
TACGAAGAGAATTCTATAGC+AGG + chr8_4:18136276-18136295 Msa1317090:three_prime_UTR 35.0%
GTATGTTGAAGATGTTCTTC+TGG - chr8_4:18136372-18136391 None:intergenic 35.0%
CACAAAAAAGGTTTAGTGAG+TGG - chr8_4:18136478-18136497 None:intergenic 35.0%
TGATTGTGAACATTGTGTTG+TGG + chr8_4:18136496-18136515 Msa1317090:three_prime_UTR 35.0%
!! GGTTTGGTGTGTAATGCAAT+GGG - chr8_4:18132014-18132033 None:intergenic 40.0%
!!! ATGTGTTGTTTTGGTGGGTT+TGG - chr8_4:18132030-18132049 None:intergenic 40.0%
TGTGGAATGAGTGGCAAAAT+GGG - chr8_4:18132086-18132105 None:intergenic 40.0%
TTGTGGAATGAGTGGCAAAA+TGG - chr8_4:18132087-18132106 None:intergenic 40.0%
TCTGTCAGATAGCACAGAAA+GGG - chr8_4:18132272-18132291 None:intergenic 40.0%
TTCTGTCAGATAGCACAGAA+AGG - chr8_4:18132273-18132292 None:intergenic 40.0%
GGTGGTGACATTGATGTTAA+TGG + chr8_4:18132505-18132524 Msa1317090:CDS 40.0%
GCTCAGTTGCTTGATATAAG+AGG + chr8_4:18132697-18132716 Msa1317090:CDS 40.0%
! ACTGAGATTAGACAAGTTGG+TGG + chr8_4:18132724-18132743 Msa1317090:CDS 40.0%
GAAAGCTTCTTCAAAAACCC+TGG - chr8_4:18132811-18132830 None:intergenic 40.0%
CATAGTCCAAATGAGTGTAG+GGG + chr8_4:18133227-18133246 Msa1317090:intron 40.0%
AAGTTTCCCCTACACTCATT+TGG - chr8_4:18133236-18133255 None:intergenic 40.0%
! AGTTTTACCAGTCACCACAT+AGG + chr8_4:18133333-18133352 Msa1317090:intron 40.0%
! GTTTTACCAGTCACCACATA+GGG + chr8_4:18133334-18133353 Msa1317090:intron 40.0%
CTGATTGAGTGAACTTGTGA+TGG + chr8_4:18133522-18133541 Msa1317090:intron 40.0%
TGATGGAAGCCAGATTTGAT+GGG + chr8_4:18133539-18133558 Msa1317090:intron 40.0%
TTCAGAGTTCCCATCAAATC+TGG - chr8_4:18133551-18133570 None:intergenic 40.0%
ATTTGATGGGAACTCTGAAC+TGG + chr8_4:18133552-18133571 Msa1317090:CDS 40.0%
GCAGAGTTAGTTACCCTTAA+CGG + chr8_4:18133577-18133596 Msa1317090:CDS 40.0%
ATAAATACCTGCCATCCTTG+TGG - chr8_4:18133643-18133662 None:intergenic 40.0%
!! ACCAAAGAAAGCATTGAGCT+TGG + chr8_4:18133768-18133787 Msa1317090:CDS 40.0%
TCCAAGCTCAATGCTTTCTT+TGG - chr8_4:18133772-18133791 None:intergenic 40.0%
TGCAATCGGAGTATGTATCT+TGG + chr8_4:18133822-18133841 Msa1317090:intron 40.0%
GATGTACTCAAACTCTCTCT+TGG + chr8_4:18133962-18133981 Msa1317090:intron 40.0%
!!! GTATTAGCCTTTTCTGAGGT+TGG + chr8_4:18134178-18134197 Msa1317090:intron 40.0%
! CAAGAAGCTTCTATTTGCTG+AGG + chr8_4:18134352-18134371 Msa1317090:CDS 40.0%
ACAGAAAAATGGTGGCTTTC+TGG - chr8_4:18134454-18134473 None:intergenic 40.0%
! TACGGTTTAAGTGTTGTTGG+AGG + chr8_4:18134740-18134759 Msa1317090:intron 40.0%
! ACGGTTTAAGTGTTGTTGGA+GGG + chr8_4:18134741-18134760 Msa1317090:intron 40.0%
TTTCTAATGGCGCAAAGTCA+AGG - chr8_4:18134927-18134946 None:intergenic 40.0%
CATTGCATATGAGAGAGTAG+AGG - chr8_4:18135013-18135032 None:intergenic 40.0%
ATTTCATCAGCAAGCTCCTT+AGG - chr8_4:18135198-18135217 None:intergenic 40.0%
!! GGAGCTTGCTGATGAAATAA+AGG + chr8_4:18135200-18135219 Msa1317090:CDS 40.0%
GAGCAATGCATCACAATTGA+CGG + chr8_4:18135268-18135287 Msa1317090:intron 40.0%
TTCCGGGAAAATTAGGACAT+CGG + chr8_4:18135368-18135387 Msa1317090:intron 40.0%
! TTCCGATGTCCTAATTTTCC+CGG - chr8_4:18135373-18135392 None:intergenic 40.0%
GGAAAATTAGGACATCGGAA+AGG + chr8_4:18135373-18135392 Msa1317090:intron 40.0%
! GACTATTTTCTGTTGGTGCA+GGG - chr8_4:18135433-18135452 None:intergenic 40.0%
!!! AGCTCTGGACTATTTTCTGT+TGG - chr8_4:18135440-18135459 None:intergenic 40.0%
!! TGCTGCTTCTACTTTTGTCT+CGG - chr8_4:18135516-18135535 None:intergenic 40.0%
!! ATGCTTCTACTTTTGTCTCG+GGG - chr8_4:18135562-18135581 None:intergenic 40.0%
!! GATGCTTCTACTTTTGTCTC+GGG - chr8_4:18135563-18135582 None:intergenic 40.0%
ACAGAGTTTATTTCAGGAGC+AGG - chr8_4:18135593-18135612 None:intergenic 40.0%
TTCGGCACAGAGTTTATTTC+AGG - chr8_4:18135599-18135618 None:intergenic 40.0%
TGTGCCGAAAACTGAAACAA+AGG + chr8_4:18135610-18135629 Msa1317090:CDS 40.0%
ACATATGGGTATGGTGAAAG+TGG - chr8_4:18135662-18135681 None:intergenic 40.0%
TCTATCAAATAGGGCTGGAA+AGG - chr8_4:18135785-18135804 None:intergenic 40.0%
GACGTGCCAATTACATACTT+AGG + chr8_4:18135846-18135865 Msa1317090:intron 40.0%
GCCAATGTCTATATTGTGTC+CGG + chr8_4:18136081-18136100 Msa1317090:intron 40.0%
ACCGGACACAATATAGACAT+TGG - chr8_4:18136085-18136104 None:intergenic 40.0%
TGAAACACTTTCACAGACAC+CGG - chr8_4:18136103-18136122 None:intergenic 40.0%
AGAGAGGCAAAGTATGTGTT+AGG - chr8_4:18136183-18136202 None:intergenic 40.0%
! GATGAAGGAGGTTTGAAATC+GGG - chr8_4:18136223-18136242 None:intergenic 40.0%
TTTGAAGGAGATGGAGATGA+AGG - chr8_4:18136238-18136257 None:intergenic 40.0%
CTTCGTACAAGTGAAACTCT+AGG - chr8_4:18136263-18136282 None:intergenic 40.0%
CTGGCAGGATTATAGATTGT+AGG - chr8_4:18136353-18136372 None:intergenic 40.0%
TAGTGAGTGGCACAAATGTA+AGG - chr8_4:18136465-18136484 None:intergenic 40.0%
TTGTGAACATTGTGTTGTGG+AGG + chr8_4:18136499-18136518 Msa1317090:three_prime_UTR 40.0%
!! GGGTTTGGTGTGTAATGCAA+TGG - chr8_4:18132015-18132034 None:intergenic 45.0%
TGTCAGATAGCACAGAAAGG+GGG - chr8_4:18132270-18132289 None:intergenic 45.0%
CTGTCAGATAGCACAGAAAG+GGG - chr8_4:18132271-18132290 None:intergenic 45.0%
GAGAACCCTGTAATTCTTGC+TGG + chr8_4:18132559-18132578 Msa1317090:CDS 45.0%
AACCCTGTAATTCTTGCTGG+TGG + chr8_4:18132562-18132581 Msa1317090:CDS 45.0%
CACCACCAGCAAGAATTACA+GGG - chr8_4:18132567-18132586 None:intergenic 45.0%
ACACCACCAGCAAGAATTAC+AGG - chr8_4:18132568-18132587 None:intergenic 45.0%
! TGCTGGTGGTGTAGCTATAT+TGG + chr8_4:18132576-18132595 Msa1317090:CDS 45.0%
AGCTATATTGGCAGTGCCAT+TGG + chr8_4:18132588-18132607 Msa1317090:CDS 45.0%
!! CAAGTTGGTGGACCAAATGT+TGG + chr8_4:18132736-18132755 Msa1317090:CDS 45.0%
TGTCGGACACTAACACATGT+CGG - chr8_4:18133102-18133121 None:intergenic 45.0%
! TGAAGCACTAACACAGACAC+CGG - chr8_4:18133209-18133228 None:intergenic 45.0%
TATGTACCCTATGTGGTGAC+TGG - chr8_4:18133343-18133362 None:intergenic 45.0%
AGTCACCACATAGGGTACAT+AGG + chr8_4:18133342-18133361 Msa1317090:intron 45.0%
CATAGCCTATGTACCCTATG+TGG - chr8_4:18133350-18133369 None:intergenic 45.0%
TACGCAGACTGCAGATGTAT+CGG - chr8_4:18133422-18133441 None:intergenic 45.0%
! GTGATGGAAGCCAGATTTGA+TGG + chr8_4:18133538-18133557 Msa1317090:intron 45.0%
GCAATTAAGGATGGTGCAGA+AGG + chr8_4:18133616-18133635 Msa1317090:CDS 45.0%
TGCAGAATAGTGGTCTTCCT+TGG + chr8_4:18133740-18133759 Msa1317090:intron 45.0%
! GCTTTCTTTGGTTCAGTCCA+AGG - chr8_4:18133760-18133779 None:intergenic 45.0%
GCAAGCAAGAAAGGGAACAT+AGG + chr8_4:18134024-18134043 Msa1317090:intron 45.0%
GGTTGATTGCAGGAATCTGA+TGG + chr8_4:18134112-18134131 Msa1317090:intron 45.0%
ATTGCAGGAATCTGATGGCT+TGG + chr8_4:18134117-18134136 Msa1317090:intron 45.0%
TGCAGCAATCCCAAGAGTAA+CGG - chr8_4:18134143-18134162 None:intergenic 45.0%
ATTGCTGCAGCTACTGGATT+GGG + chr8_4:18134154-18134173 Msa1317090:CDS 45.0%
!!! GGGTGTATTAGCCTTTTCTG+AGG + chr8_4:18134174-18134193 Msa1317090:CDS 45.0%
CATTGGACCAACCTCAGAAA+AGG - chr8_4:18134188-18134207 None:intergenic 45.0%
TTGCAGCTGATCCTACAAGT+TGG - chr8_4:18134316-18134335 None:intergenic 45.0%
! CGGTTTAAGTGTTGTTGGAG+GGG + chr8_4:18134742-18134761 Msa1317090:intron 45.0%
!! AGGGAGAGTCTTATTGTTGG+CGG - chr8_4:18135414-18135433 None:intergenic 45.0%
!! TGCAGGGAGAGTCTTATTGT+TGG - chr8_4:18135417-18135436 None:intergenic 45.0%
! GGACTATTTTCTGTTGGTGC+AGG - chr8_4:18135434-18135453 None:intergenic 45.0%
TTTGTCTCGGGGACAATTTC+AGG - chr8_4:18135503-18135522 None:intergenic 45.0%
!! CTGCTTCTACTTTTGTCTCG+GGG - chr8_4:18135514-18135533 None:intergenic 45.0%
!! GCTGCTTCTACTTTTGTCTC+GGG - chr8_4:18135515-18135534 None:intergenic 45.0%
TTTGTCTCGGGGACAATTTC+AGG - chr8_4:18135503-18135522 None:intergenic 45.0%
GGGTATGGTGAAAGTGGTTT+AGG - chr8_4:18135656-18135675 None:intergenic 45.0%
TTCACATACTTAGGCAGGGA+CGG - chr8_4:18135817-18135836 None:intergenic 45.0%
! CGTAACTACATGGGTTGTGT+TGG - chr8_4:18136019-18136038 None:intergenic 45.0%
!! GTGAAACTCTAGGGCTTTGA+AGG - chr8_4:18136253-18136272 None:intergenic 45.0%
GTTGAAGATGTTCTTCTGGC+AGG - chr8_4:18136368-18136387 None:intergenic 45.0%
!!! CTATTTATTATATATTATTT+TGG - chr8_4:18134854-18134873 None:intergenic 5.0%
!! ATTAAAAATTTAATGAAAAA+AGG - chr8_4:18135111-18135130 None:intergenic 5.0%
GTCAGATAGCACAGAAAGGG+GGG - chr8_4:18132269-18132288 None:intergenic 50.0%
GGACAATCTCCTAGTGCTTC+TGG + chr8_4:18132481-18132500 Msa1317090:CDS 50.0%
CAATCTCCTAGTGCTTCTGG+TGG + chr8_4:18132484-18132503 Msa1317090:CDS 50.0%
GATTCAACACCCCAAGCCTT+AGG - chr8_4:18132637-18132656 None:intergenic 50.0%
! GTTGGTGGACCAAATGTTGG+TGG + chr8_4:18132739-18132758 Msa1317090:CDS 50.0%
! ATGGCTTGGCCGTTACTCTT+GGG + chr8_4:18134131-18134150 Msa1317090:CDS 50.0%
GATTGCTGCAGCTACTGGAT+TGG + chr8_4:18134153-18134172 Msa1317090:CDS 50.0%
! GGTATTGTTGGTGAGGCAGA+TGG - chr8_4:18134701-18134720 None:intergenic 50.0%
GAACACCAAGGTTGCTCCTA+AGG + chr8_4:18135179-18135198 Msa1317090:CDS 50.0%
AAGCTCCTTAGGAGCAACCT+TGG - chr8_4:18135187-18135206 None:intergenic 50.0%
! GTCTTATTGTTGGCGGAGGT+TGG - chr8_4:18135407-18135426 None:intergenic 50.0%
!! GAGAGTCTTATTGTTGGCGG+AGG - chr8_4:18135411-18135430 None:intergenic 50.0%
GAAAGTGGTTTAGGCTGCAC+AGG - chr8_4:18135647-18135666 None:intergenic 50.0%
AGACAATGTCCGGTGTCTGA+CGG + chr8_4:18135989-18136008 Msa1317090:intron 50.0%
GTTGGTATACCGTCAGACAC+CGG - chr8_4:18136001-18136020 None:intergenic 50.0%
GAAGGAGATGGAGATGAAGG+AGG - chr8_4:18136235-18136254 None:intergenic 50.0%
!! CTCTAGGGCTTTGAAGGAGA+TGG - chr8_4:18136247-18136266 None:intergenic 50.0%
TCTCCTAGTGCTTCTGGTGG+TGG + chr8_4:18132487-18132506 Msa1317090:CDS 55.0%
!! TCACCACCACCAGAAGCACT+AGG - chr8_4:18132493-18132512 None:intergenic 55.0%
GATGGTGCAGAAGGACCACA+AGG + chr8_4:18133625-18133644 Msa1317090:CDS 55.0%
GTGCAGAAGGACCACAAGGA+TGG + chr8_4:18133629-18133648 Msa1317090:CDS 55.0%
AGAAGGACCACAAGGATGGC+AGG + chr8_4:18133633-18133652 Msa1317090:CDS 55.0%
! GATGGCTTGGCCGTTACTCT+TGG + chr8_4:18134130-18134149 Msa1317090:CDS 55.0%
CTTGGGATTGCTGCAGCTAC+TGG + chr8_4:18134148-18134167 Msa1317090:CDS 55.0%
!! AGTCCAGAGCTTGCTACAGC+TGG + chr8_4:18135449-18135468 Msa1317090:CDS 55.0%
!! TGAGGCAGATGGTGCTGCAG+GGG - chr8_4:18134690-18134709 None:intergenic 60.0%
!! GTGAGGCAGATGGTGCTGCA+GGG - chr8_4:18134691-18134710 None:intergenic 60.0%
!! CCAGAGCTTGCTACAGCTGG+CGG + chr8_4:18135452-18135471 Msa1317090:CDS 60.0%
!! GGTGAGGCAGATGGTGCTGC+AGG - chr8_4:18134692-18134711 None:intergenic 65.0%
CCGCCAGCTGTAGCAAGCTC+TGG - chr8_4:18135455-18135474 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 18132001 18136784 18132001 ID=Msa1317090;Name=Msa1317090
chr8_4 mRNA 18132001 18136784 18132001 ID=Msa1317090-mRNA-1;Parent=Msa1317090;Name=Msa1317090-mRNA-1;_AED=0.04;_eAED=0.04;_QI=237|1|0.87|1|1|1|8|520|467
chr8_4 exon 18132001 18132878 18132001 ID=Msa1317090-mRNA-1:exon:6699;Parent=Msa1317090-mRNA-1
chr8_4 exon 18133552 18133654 18133552 ID=Msa1317090-mRNA-1:exon:6700;Parent=Msa1317090-mRNA-1
chr8_4 exon 18133745 18133831 18133745 ID=Msa1317090-mRNA-1:exon:6701;Parent=Msa1317090-mRNA-1
chr8_4 exon 18134124 18134195 18134124 ID=Msa1317090-mRNA-1:exon:6702;Parent=Msa1317090-mRNA-1
chr8_4 exon 18134299 18134373 18134299 ID=Msa1317090-mRNA-1:exon:6703;Parent=Msa1317090-mRNA-1
chr8_4 exon 18135141 18135221 18135141 ID=Msa1317090-mRNA-1:exon:6704;Parent=Msa1317090-mRNA-1
chr8_4 exon 18135383 18135679 18135383 ID=Msa1317090-mRNA-1:exon:6705;Parent=Msa1317090-mRNA-1
chr8_4 exon 18136217 18136784 18136217 ID=Msa1317090-mRNA-1:exon:6706;Parent=Msa1317090-mRNA-1
chr8_4 five_prime_UTR 18132001 18132237 18132001 ID=Msa1317090-mRNA-1:five_prime_utr;Parent=Msa1317090-mRNA-1
chr8_4 CDS 18132238 18132878 18132238 ID=Msa1317090-mRNA-1:cds;Parent=Msa1317090-mRNA-1
chr8_4 CDS 18133552 18133654 18133552 ID=Msa1317090-mRNA-1:cds;Parent=Msa1317090-mRNA-1
chr8_4 CDS 18133745 18133831 18133745 ID=Msa1317090-mRNA-1:cds;Parent=Msa1317090-mRNA-1
chr8_4 CDS 18134124 18134195 18134124 ID=Msa1317090-mRNA-1:cds;Parent=Msa1317090-mRNA-1
chr8_4 CDS 18134299 18134373 18134299 ID=Msa1317090-mRNA-1:cds;Parent=Msa1317090-mRNA-1
chr8_4 CDS 18135141 18135221 18135141 ID=Msa1317090-mRNA-1:cds;Parent=Msa1317090-mRNA-1
chr8_4 CDS 18135383 18135679 18135383 ID=Msa1317090-mRNA-1:cds;Parent=Msa1317090-mRNA-1
chr8_4 CDS 18136217 18136264 18136217 ID=Msa1317090-mRNA-1:cds;Parent=Msa1317090-mRNA-1
chr8_4 three_prime_UTR 18136265 18136784 18136265 ID=Msa1317090-mRNA-1:three_prime_utr;Parent=Msa1317090-mRNA-1
Gene Sequence

>Msa1317090

ATGGAGGCCCTCAATTCTACTACTTTTACCCCCCTTTCTGTGCTATCTGACAGAACAAAACACAAACACCCCACAAAATTTTCATGCAAAGCTTCAAACTTTTCAACTTCAATCAACAAAAAACAGAACTTAAGAGAGTTTTTATCAAAGAATTTTCAAAAGGGTCTTTTTCTTGCTGCAGCTTCAGTTGTGAATGTTAACAATGGTGAATTTGCAAATGCTTTAACATATGAAGAAGCATTAGGACAATCTCCTAGTGCTTCTGGTGGTGGTGACATTGATGTTAATGGTTTTGTAGATAGTGTTATAGGCTTTGCAACTGAGAACCCTGTAATTCTTGCTGGTGGTGTAGCTATATTGGCAGTGCCATTGGTTTTGTCTCAGATTTTGAAAAAACCTAAGGCTTGGGGTGTTGAATCTGCTAAAAATGCTTATGCAAAATTAGGTGCTGATGGGAATGCTCAGTTGCTTGATATAAGAGGTTTGACTGAGATTAGACAAGTTGGTGGACCAAATGTTGGTGGTTTGAAGAAGAAATCAGTGGCAGTAACTTATAAAGGTGATGATAAGCCAGGGTTTTTGAAGAAGCTTTCTTTGAAGTTTAAGGAGCCTGAGAATACTACATTGTTCATTCTTGACAAATTTGATGGGAACTCTGAACTGGTTGCAGAGTTAGTTACCCTTAACGGATTTAAATCTGCTTATGCAATTAAGGATGGTGCAGAAGGACCACAAGGATGGCAGAATAGTGGTCTTCCTTGGACTGAACCAAAGAAAGCATTGAGCTTGGATTTTGGCAGTTTGACAGATACTATCAATGATGCAATCGGAGAATCTGATGGCTTGGCCGTTACTCTTGGGATTGCTGCAGCTACTGGATTGGGTGTATTAGCCTTTTCTGAGGTAGAAACAATTCTCCAACTTGTAGGATCAGCTGCAATTGTTCAGTTTGCAAGCAAGAAGCTTCTATTTGCTGAGGACCGGAAGAAAACACTAAAACAAGTTAATGAGTTTTTGAACACCAAGGTTGCTCCTAAGGAGCTTGCTGATGAAATAAAGGACATCGGAAAGGCTCTTCTACCAACCTCCGCCAACAATAAGACTCTCCCTGCACCAACAGAAAATAGTCCAGAGCTTGCTACAGCTGGCGGAACTGTATTGAACGCAGAAGCTACTCCTGAAATTGTCCCCGAGACAAAAGTAGAAGCAGCAGCAGAAGCTACTCCTGAAATTGTCCCCGAGACAAAAGTAGAAGCATCAGCAGAACCTGCTCCTGAAATAAACTCTGTGCCGAAAACTGAAACAAAGGCAGAGTCAATTCCTGTGCAGCCTAAACCACTTTCACCATACCCATATTATCCCGATTTCAAACCTCCTTCATCTCCATCTCCTTCAAAGCCCTAG

Protein sequence

>Msa1317090

MEALNSTTFTPLSVLSDRTKHKHPTKFSCKASNFSTSINKKQNLREFLSKNFQKGLFLAAASVVNVNNGEFANALTYEEALGQSPSASGGGDIDVNGFVDSVIGFATENPVILAGGVAILAVPLVLSQILKKPKAWGVESAKNAYAKLGADGNAQLLDIRGLTEIRQVGGPNVGGLKKKSVAVTYKGDDKPGFLKKLSLKFKEPENTTLFILDKFDGNSELVAELVTLNGFKSAYAIKDGAEGPQGWQNSGLPWTEPKKALSLDFGSLTDTINDAIGESDGLAVTLGIAAATGLGVLAFSEVETILQLVGSAAIVQFASKKLLFAEDRKKTLKQVNEFLNTKVAPKELADEIKDIGKALLPTSANNKTLPAPTENSPELATAGGTVLNAEATPEIVPETKVEAAAEATPEIVPETKVEASAEPAPEINSVPKTETKAESIPVQPKPLSPYPYYPDFKPPSSPSPSKP*