AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0788490


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0788490 MtrunA17_Chr5g0434971 97.150 386 10 1 1 385 1 386 0.0 764
Msa0788490 MtrunA17_Chr6g0474331 74.320 331 84 1 53 382 15 345 0.0 515
Msa0788490 MtrunA17_Chr1g0204101 74.847 326 79 2 54 378 13 336 1.70e-180 504
Msa0788490 MtrunA17_Chr2g0329451 68.421 323 100 2 56 378 5 325 2.15e-162 458
Msa0788490 MtrunA17_Chr1g0188291 66.987 312 102 1 63 374 5 315 3.46e-157 445
Msa0788490 MtrunA17_Chr4g0033631 66.771 319 105 1 64 382 13 330 1.07e-155 441
Msa0788490 MtrunA17_Chr1g0183241 58.934 319 109 3 61 378 105 402 8.67e-125 366
Msa0788490 MtrunA17_Chr1g0171921 56.748 326 131 6 61 381 178 498 1.23e-116 349
Msa0788490 MtrunA17_Chr1g0183661 57.343 286 109 3 81 365 3 276 1.23e-111 328
Msa0788490 MtrunA17_Chr1g0177771 54.938 324 127 5 61 381 248 555 9.17e-110 332
Msa0788490 MtrunA17_Chr1g0177321 52.778 324 125 5 61 381 174 472 5.88e-103 312
Msa0788490 MtrunA17_Chr7g0246421 61.658 193 73 1 190 381 2 194 4.27e-83 251
Msa0788490 MtrunA17_Chr1g0176221 49.576 236 89 2 143 378 1 206 4.90e-68 214
Msa0788490 MtrunA17_Chr4g0008441 33.056 360 195 4 65 378 92 451 6.20e-55 187
Msa0788490 MtrunA17_Chr7g0246411 64.615 130 44 1 63 190 38 167 1.92e-53 175
Msa0788490 MtrunA17_Chr4g0020911 60.741 135 52 1 189 322 55 189 8.77e-51 169
Msa0788490 MtrunA17_Chr5g0419371 30.548 347 199 7 65 374 209 550 3.26e-47 169
Msa0788490 MtrunA17_Chr2g0314311 27.931 290 182 7 97 380 89 357 1.57e-15 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0788490 AT1G66430.1 78.295 387 77 4 1 384 1 383 0.0 595
Msa0788490 AT5G51830.2 72.561 328 88 2 55 380 11 338 2.97e-175 492
Msa0788490 AT5G51830.1 72.561 328 88 2 55 380 11 338 2.97e-175 492
Msa0788490 AT3G59480.1 67.188 320 103 2 63 382 7 324 9.97e-158 447
Msa0788490 AT1G06030.1 66.984 315 103 1 66 380 11 324 7.54e-156 442
Msa0788490 AT4G10260.1 67.961 309 98 1 64 372 4 311 3.23e-154 437
Msa0788490 AT1G06020.1 65.312 320 110 1 61 380 5 323 1.19e-153 437
Msa0788490 AT2G31390.1 65.931 317 107 1 66 382 9 324 1.48e-153 436
Msa0788490 AT3G54090.1 33.056 360 194 6 65 378 102 460 2.49e-55 189
Msa0788490 AT1G50390.1 50.575 174 56 1 211 384 1 144 9.91e-51 167
Msa0788490 AT1G69200.1 30.395 329 194 6 65 359 205 532 3.54e-44 162
Msa0788490 AT1G17160.1 27.027 296 179 9 97 380 105 375 1.27e-14 75.1

Find 119 sgRNAs with CRISPR-Local

Find 518 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAACCTGAGGCTTCCTTTA+TGG 0.168693 5_2:+75188517 Msa0788490:CDS
AGAACAGTGTTGAATGTTAA+TGG 0.178871 5_2:-75183924 None:intergenic
GAGAAGGAATTCTGAGTATA+TGG 0.229087 5_2:+75188559 Msa0788490:CDS
ACAAAGGCAATACCTGAAAA+TGG 0.237120 5_2:+75186077 Msa0788490:CDS
CCAAGTCTAGTTCATCTTCT+TGG 0.239311 5_2:-75188249 None:intergenic
AACTGTTAGTGGCCTTTCTT+TGG 0.246570 5_2:+75186166 Msa0788490:CDS
TACGGATCTTTCATTACTTC+AGG 0.289822 5_2:+75189416 Msa0788490:CDS
TTAAAATTCAACCGAACATT+AGG 0.296573 5_2:-75184107 None:intergenic
CAGGCCAAGATCTTTCATTA+TGG 0.304009 5_2:+75188402 Msa0788490:intron
AGAGGCGATTCCTTTGTTTC+AGG 0.315237 5_2:-75186104 None:intergenic
TGATGCACCGGCATTTAAAA+AGG 0.319751 5_2:+75186190 Msa0788490:CDS
TCGCCTCTGGTGGTTTGTTT+CGG 0.326535 5_2:+75186119 Msa0788490:CDS
GATTTGTTGGATTACTGTTT+CGG 0.333070 5_2:-75183872 None:intergenic
CGAACAACAGCATCATTGTA+TGG 0.334727 5_2:-75188794 None:intergenic
TCAGTTCACGTGGTTGCATA+TGG 0.335685 5_2:+75190539 Msa0788490:three_prime_UTR
AGAACCAAGTGTTCTAATAA+TGG 0.344827 5_2:+75190462 Msa0788490:three_prime_UTR
AACATCAGGTTATATATGTT+TGG 0.348565 5_2:+75190502 Msa0788490:three_prime_UTR
GTCATTCTTTATCCAACATC+AGG 0.368894 5_2:+75190488 Msa0788490:three_prime_UTR
ACAAGGAGTAGTTTGAGGTT+TGG 0.379921 5_2:-75188830 None:intergenic
CGAATATGAAATTATGATAC+AGG 0.390760 5_2:-75190387 None:intergenic
TGAATTGAGTTATGATTTGT+TGG 0.393998 5_2:-75183885 None:intergenic
AAGCCGATGAACCTCCTAAT+CGG 0.394552 5_2:-75186253 None:intergenic
CTCTCCATTATTAGAACACT+TGG 0.398882 5_2:-75190466 None:intergenic
CTCGTTCTCCATCACTCCTT+AGG 0.400314 5_2:-75188186 None:intergenic
GAGGCGATTCCTTTGTTTCA+GGG 0.403590 5_2:-75186103 None:intergenic
CATAAAGGAAGCCTCAGGTT+AGG 0.408170 5_2:-75188516 None:intergenic
CTCATTCTCCTCCTAATGTT+CGG 0.412156 5_2:+75184096 Msa0788490:CDS
GTTTCCTTTGTGGGCAATGC+TGG 0.413312 5_2:-75190342 None:intergenic
CCAACCCATTGTTAAAGCTT+CGG 0.423542 5_2:+75184061 Msa0788490:CDS
CTATCTGCAGAAGGCCATAA+AGG 0.427028 5_2:-75188531 None:intergenic
CCTTTCTTTGGCTGATGCAC+CGG 0.434505 5_2:+75186178 Msa0788490:CDS
CCTGCAGCCTTCTGCACCTT+CGG 0.435704 5_2:-75188855 None:intergenic
TTCAGAACAGTTTCCTTTGT+GGG 0.437378 5_2:-75190351 None:intergenic
CGAACCATAATGAAAGATCT+TGG 0.441728 5_2:-75188406 None:intergenic
GCTAAGGCGGTACGTGCACC+AGG 0.444231 5_2:-75188154 None:intergenic
CGGTAACAAGGAGTAGTTTG+AGG 0.447611 5_2:-75188835 None:intergenic
ATTATGATACAGGTTTAAGC+AGG 0.460599 5_2:-75190377 None:intergenic
CCAAGAAGATGAACTAGACT+TGG 0.462137 5_2:+75188249 Msa0788490:CDS
CGGTAGAGTGGCGGGAATGA+AGG 0.464461 5_2:+75189329 Msa0788490:CDS
GCTGTAGGCATATCCCGATT+AGG 0.469524 5_2:+75186239 Msa0788490:CDS
CAGGTTGGTGAGGATGAATT+CGG 0.473756 5_2:+75188070 Msa0788490:intron
GGAGTAGTTTGAGGTTTGGA+TGG 0.478027 5_2:-75188826 None:intergenic
CTCAAGTTTGCCAATGCTTG+TGG 0.478682 5_2:+75190288 Msa0788490:CDS
AAATGGGAGCCCTGAAACAA+AGG 0.480045 5_2:+75186094 Msa0788490:CDS
TGAAACAAAGGAATCGCCTC+TGG 0.480047 5_2:+75186106 Msa0788490:CDS
CAAAGGCAATACCTGAAAAT+GGG 0.487466 5_2:+75186078 Msa0788490:CDS
TTCTTTCTGCTTCACAAGTG+TGG 0.490123 5_2:+75184007 Msa0788490:CDS
AGCCGATGAACCTCCTAATC+GGG 0.490889 5_2:-75186252 None:intergenic
TTGCTAGAAGAGATGTTGAT+TGG 0.493133 5_2:-75190574 None:intergenic
TTGGAGAAGCATATCAGCAC+TGG 0.493942 5_2:-75188230 None:intergenic
AAAACCGAAGCTTTAACAAT+GGG 0.494614 5_2:-75184065 None:intergenic
CCTTAGCATTTGTTACCCTA+AGG 0.495366 5_2:+75188170 Msa0788490:CDS
ATTCAGAACAGTTTCCTTTG+TGG 0.496575 5_2:-75190352 None:intergenic
ATAAAGGAAGCCTCAGGTTA+GGG 0.497182 5_2:-75188515 None:intergenic
TTAGGAGGAGAATGAGATGA+AGG 0.501955 5_2:-75184089 None:intergenic
GAATTCAGCGGTAGAGTGGC+GGG 0.505457 5_2:+75189321 Msa0788490:CDS
TCGTTCTCCATCACTCCTTA+GGG 0.506828 5_2:-75188185 None:intergenic
AGAAGGAATTCTGAGTATAT+GGG 0.508950 5_2:+75188560 Msa0788490:CDS
TATAACAGAACCATGCAAAT+CGG 0.510105 5_2:+75188437 Msa0788490:CDS
ATGCCTACAGCAACATTAGC+AGG 0.513767 5_2:-75186227 None:intergenic
GCAAAGGCTGCAAAAGAAGC+TGG 0.517282 5_2:+75188474 Msa0788490:CDS
TACTGTTTCGGAGGAAGCAA+AGG 0.518381 5_2:-75183860 None:intergenic
CCGAAGGTGCAGAAGGCTGC+AGG 0.522313 5_2:+75188855 Msa0788490:CDS
AGTGTGGTTTCTAACCCTCC+TGG 0.524883 5_2:+75184023 Msa0788490:CDS
CAGGGTCAAAACGCATCCCT+TGG 0.526315 5_2:-75188135 None:intergenic
GAAAATAATGTAAACAGCCA+AGG 0.527985 5_2:+75188118 Msa0788490:CDS
CCGAAGCTTTAACAATGGGT+TGG 0.529981 5_2:-75184061 None:intergenic
AAGAAAGGCCACTAACAGTT+GGG 0.530391 5_2:-75186163 None:intergenic
AAATTCAACCGAACATTAGG+AGG 0.534291 5_2:-75184104 None:intergenic
AGTCAATGCACCACAAGCAT+TGG 0.535360 5_2:-75190298 None:intergenic
CCGGTGCATCAGCCAAAGAA+AGG 0.542352 5_2:-75186178 None:intergenic
ATCCCGATTAGGAGGTTCAT+CGG 0.545549 5_2:+75186250 Msa0788490:CDS
GCAGTTGACACCACTGGTGC+TGG 0.552715 5_2:+75189357 Msa0788490:CDS
TTTGTTACCCTAAGGAGTGA+TGG 0.553179 5_2:+75188178 Msa0788490:CDS
AAAGAAAGGCCACTAACAGT+TGG 0.555253 5_2:-75186164 None:intergenic
AAACATATATAACCTGATGT+TGG 0.555437 5_2:-75190500 None:intergenic
CTTCTGCACCTTCGGTAACA+AGG 0.557864 5_2:-75188847 None:intergenic
TGGAGAAGCATATCAGCACT+GGG 0.560245 5_2:-75188229 None:intergenic
GGCACACGTAGCTGCAGCAA+AGG 0.562775 5_2:+75188458 Msa0788490:CDS
TGTTCTATGGCTCTTCAATG+TGG 0.571763 5_2:+75183984 Msa0788490:exon
ACATTAGCAGGAGCACCACC+TGG 0.573506 5_2:-75186215 None:intergenic
GAACAACAGCATCATTGTAT+GGG 0.576967 5_2:-75188793 None:intergenic
AAAATAATGTAAACAGCCAA+GGG 0.579126 5_2:+75188119 Msa0788490:CDS
CCTTAGGGTAACAAATGCTA+AGG 0.580393 5_2:-75188170 None:intergenic
TGGATGAATTTAGCTGAACC+AGG 0.581772 5_2:-75184041 None:intergenic
CTTGTTACCGAAGGTGCAGA+AGG 0.585420 5_2:+75188848 Msa0788490:CDS
GCAGGAATTCAGCGGTAGAG+TGG 0.585659 5_2:+75189317 Msa0788490:intron
GCTCCTGCTAATGTTGCTGT+AGG 0.587693 5_2:+75186224 Msa0788490:CDS
AAGGCCATAAAGGAAGCCTC+AGG 0.593306 5_2:-75188521 None:intergenic
CTTTGTTACAGGAAAGACAA+AGG 0.596846 5_2:+75186061 Msa0788490:intron
AATACTATCACAATTAGCTA+CGG 0.601113 5_2:+75189398 Msa0788490:CDS
GCTACGTGTGCCGATTTGCA+TGG 0.603029 5_2:-75188447 None:intergenic
TAGAGTGGCGGGAATGAAGG+TGG 0.603673 5_2:+75189332 Msa0788490:CDS
GGAATTCAGCGGTAGAGTGG+CGG 0.604839 5_2:+75189320 Msa0788490:intron
TGAATTTAGCTGAACCAGGA+GGG 0.605670 5_2:-75184037 None:intergenic
CATTGAAGAGCCATAGAACA+AGG 0.612318 5_2:-75183981 None:intergenic
TGTCTTATGACCCTAACCTG+AGG 0.617249 5_2:+75188505 Msa0788490:CDS
AACAAAGGAATCGCCTCTGG+TGG 0.618641 5_2:+75186109 Msa0788490:CDS
GTAGGCATATCCCGATTAGG+AGG 0.620851 5_2:+75186242 Msa0788490:CDS
TTGTTGGATTACTGTTTCGG+AGG 0.621285 5_2:-75183869 None:intergenic
TCTCTAGCACTATCTGCAGA+AGG 0.622016 5_2:-75188540 None:intergenic
TATGCTTGCAGATATACTCA+AGG 0.627173 5_2:+75188096 Msa0788490:CDS
AAACTACTCCTTGTTACCGA+AGG 0.636668 5_2:+75188839 Msa0788490:CDS
TATTCTTTGCAGGAATTCAG+CGG 0.640550 5_2:+75189309 Msa0788490:intron
GGAGACTGCAGATATCATCA+AGG 0.647359 5_2:+75188581 Msa0788490:CDS
TTATGATACAGGTTTAAGCA+GGG 0.652369 5_2:-75190376 None:intergenic
GCATTGACTGTGACTGAGAG+AGG 0.655698 5_2:+75190312 Msa0788490:CDS
ATGAATTTAGCTGAACCAGG+AGG 0.662711 5_2:-75184038 None:intergenic
GTGGATGCAGTTGACACCAC+TGG 0.675421 5_2:+75189351 Msa0788490:CDS
AAAAGCGTCACCAGCACCAG+TGG 0.676240 5_2:-75189367 None:intergenic
TCTGCAGATAGTGCTAGAGA+AGG 0.676637 5_2:+75188543 Msa0788490:CDS
AATACCAGCATTGCCCACAA+AGG 0.679434 5_2:+75190338 Msa0788490:CDS
TAGGGTAACAAATGCTAAGG+CGG 0.682155 5_2:-75188167 None:intergenic
AGACTTGGACTTAATCACAA+AGG 0.693543 5_2:+75188264 Msa0788490:CDS
GCAACATGTACAGGTTGGTG+AGG 0.694645 5_2:+75188060 Msa0788490:intron
TCTCCGAAACAAACCACCAG+AGG 0.694686 5_2:-75186122 None:intergenic
AGGCTGCAGGTATTACACCA+AGG 0.733944 5_2:+75188868 Msa0788490:CDS
CTAAGGCGGTACGTGCACCA+GGG 0.735969 5_2:-75188153 None:intergenic
GGAGAAGCATATCAGCACTG+GGG 0.798655 5_2:-75188228 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGAAATCAAATATAAT+GGG - chr5_2:75186467-75186486 None:intergenic 10.0%
!!! AATTTTGAAATCAAATATAA+TGG - chr5_2:75186468-75186487 None:intergenic 10.0%
!! ATAAAAAAAAAAACTTTACA+GGG - chr5_2:75187441-75187460 None:intergenic 10.0%
!! AATAAAAAAAAAAACTTTAC+AGG - chr5_2:75187442-75187461 None:intergenic 10.0%
!!! AAAACAAATTATTTTTACAA+GGG - chr5_2:75187469-75187488 None:intergenic 10.0%
!! CTTGAAAAAAAAAATAAAAT+TGG + chr5_2:75187527-75187546 Msa0788490:intron 10.0%
!!! ATAATTTAAGATACATTTTT+TGG - chr5_2:75187793-75187812 None:intergenic 10.0%
!!! TAATGTTTTATCATAAAATT+TGG - chr5_2:75189169-75189188 None:intergenic 10.0%
!!! AATTTTATGATAAAACATTA+TGG + chr5_2:75189169-75189188 Msa0788490:intron 10.0%
!! AAAATAAAATAAAGAAATCA+TGG - chr5_2:75189261-75189280 None:intergenic 10.0%
!!! TCTTTATTTTATTTTTTGAA+AGG + chr5_2:75189266-75189285 Msa0788490:intron 10.0%
!!! ATCAATTTTTTTTTTTTTTG+TGG + chr5_2:75189518-75189537 Msa0788490:intron 10.0%
!! TAAAAAAAAAAACTTTACAG+GGG - chr5_2:75187440-75187459 None:intergenic 15.0%
!!! AAACAAATTATTTTTACAAG+GGG - chr5_2:75187468-75187487 None:intergenic 15.0%
!!! CAAAACAAATTATTTTTACA+AGG - chr5_2:75187470-75187489 None:intergenic 15.0%
!!! AATAAAATTGGTTTTTTGTT+TGG + chr5_2:75187539-75187558 Msa0788490:intron 15.0%
!!! ATCAAAACAAAAAATTTTAC+AGG + chr5_2:75187578-75187597 Msa0788490:intron 15.0%
!!! TCAAAACAAAAAATTTTACA+GGG + chr5_2:75187579-75187598 Msa0788490:intron 15.0%
!! TCAAAAAAAAAAATTTACAG+TGG + chr5_2:75187609-75187628 Msa0788490:intron 15.0%
!! CAAAAAAAAAAATTTACAGT+GGG + chr5_2:75187610-75187629 Msa0788490:intron 15.0%
!! AAAAAAAAAAATTTACAGTG+GGG + chr5_2:75187611-75187630 Msa0788490:intron 15.0%
!!! TTAAATTTTTCATGATTAGT+TGG - chr5_2:75190661-75190680 None:intergenic 15.0%
!!! TTTTAAAGGTAAATCAATTC+TGG + chr5_2:75184124-75184143 Msa0788490:intron 20.0%
!! TTTAAAGGTAAATCAATTCT+GGG + chr5_2:75184125-75184144 Msa0788490:intron 20.0%
!! CATGTTTATTATTTCATGAA+AGG + chr5_2:75184269-75184288 Msa0788490:intron 20.0%
!!! TTTTGGAATTTTGAAATCTA+AGG + chr5_2:75184315-75184334 Msa0788490:intron 20.0%
!! CATATAAGTGTTTATGTATA+AGG + chr5_2:75184481-75184500 Msa0788490:intron 20.0%
!! TCAAATAAGTCAATTCAAAT+AGG + chr5_2:75184680-75184699 Msa0788490:intron 20.0%
!!! AATTATAAGAACCACTTTTT+AGG + chr5_2:75184911-75184930 Msa0788490:intron 20.0%
!!! ATTTTCTTGGTAATTATCAA+GGG + chr5_2:75185156-75185175 Msa0788490:intron 20.0%
!!! ATTAGTCCATTTAATTTACT+TGG + chr5_2:75185347-75185366 Msa0788490:intron 20.0%
!!! TTAGTCCATTTAATTTACTT+GGG + chr5_2:75185348-75185367 Msa0788490:intron 20.0%
!! ATATTGCATTCAAATGTAAT+GGG + chr5_2:75185607-75185626 Msa0788490:intron 20.0%
!! TTGTTCCATGAAATATATAT+AGG + chr5_2:75186521-75186540 Msa0788490:intron 20.0%
!! AACATCCTATATATATTTCA+TGG - chr5_2:75186529-75186548 None:intergenic 20.0%
!! AAAAAGTGATTATAAATAGG+AGG - chr5_2:75186736-75186755 None:intergenic 20.0%
!!! TCCTATTTATAATCACTTTT+TGG + chr5_2:75186735-75186754 Msa0788490:intron 20.0%
!!! CCTATTTATAATCACTTTTT+GGG + chr5_2:75186736-75186755 Msa0788490:intron 20.0%
!! TCAAATATTACTTGTAATGA+GGG - chr5_2:75187180-75187199 None:intergenic 20.0%
!! TTCAAATATTACTTGTAATG+AGG - chr5_2:75187181-75187200 None:intergenic 20.0%
!! AAAAAAAAAAACTTTACAGG+GGG - chr5_2:75187439-75187458 None:intergenic 20.0%
!!! AACAAATTATTTTTACAAGG+GGG - chr5_2:75187467-75187486 None:intergenic 20.0%
!!! AAGAAATTTTCGTTTTTGTT+TGG - chr5_2:75187510-75187529 None:intergenic 20.0%
!!! CAAAACAAAAAATTTTACAG+GGG + chr5_2:75187580-75187599 Msa0788490:intron 20.0%
!! GTAAAAAATGTTCATGATAA+GGG - chr5_2:75187694-75187713 None:intergenic 20.0%
!!! ATAAAGTTGATAAATGTAGA+TGG - chr5_2:75187716-75187735 None:intergenic 20.0%
!! ATTAGGTAATTCTTGTAAAA+TGG - chr5_2:75187860-75187879 None:intergenic 20.0%
!! TAAGTATGTCTATAATTATG+TGG + chr5_2:75187899-75187918 Msa0788490:intron 20.0%
!!! TTCTGTTATTTATTTCTTAC+AGG + chr5_2:75188383-75188402 Msa0788490:intron 20.0%
!!! TTTTCTAGAATAAGAATTAC+AGG + chr5_2:75188668-75188687 Msa0788490:intron 20.0%
!! TATCTAATTACACATAGATT+AGG + chr5_2:75188934-75188953 Msa0788490:intron 20.0%
!! GTTGTTTGGTTAAAATATTT+GGG - chr5_2:75189480-75189499 None:intergenic 20.0%
!! TATTTCTTTAAGCTACTATA+GGG - chr5_2:75189825-75189844 None:intergenic 20.0%
!! ATATTTCTTTAAGCTACTAT+AGG - chr5_2:75189826-75189845 None:intergenic 20.0%
!! ATAAGCATTTATATGATAAG+TGG + chr5_2:75189909-75189928 Msa0788490:intron 20.0%
!! TAGGTATATCCTAAATTTAA+GGG - chr5_2:75189975-75189994 None:intergenic 20.0%
!! ATAGGTATATCCTAAATTTA+AGG - chr5_2:75189976-75189995 None:intergenic 20.0%
!! AACATAAACTAAAATGCAAT+GGG - chr5_2:75190125-75190144 None:intergenic 20.0%
!! TAACATAAACTAAAATGCAA+TGG - chr5_2:75190126-75190145 None:intergenic 20.0%
!!! CATATTCGAGTATTAATTTT+TGG + chr5_2:75190402-75190421 Msa0788490:three_prime_UTR 20.0%
!!! ATTAATTTTTGGTGAAGTTT+AGG + chr5_2:75190413-75190432 Msa0788490:three_prime_UTR 20.0%
!!! AAGTGAGCAATTAATTTTAT+AGG + chr5_2:75190620-75190639 Msa0788490:three_prime_UTR 20.0%
!!! AGTGAGCAATTAATTTTATA+GGG + chr5_2:75190621-75190640 Msa0788490:three_prime_UTR 20.0%
!! TGAATTGAGTTATGATTTGT+TGG - chr5_2:75183888-75183907 None:intergenic 25.0%
! TTAAAATTCAACCGAACATT+AGG - chr5_2:75184110-75184129 None:intergenic 25.0%
!! AATGTTCGGTTGAATTTTAA+AGG + chr5_2:75184110-75184129 Msa0788490:CDS 25.0%
!! CAAAAAATTTTGCTCATTTC+AGG - chr5_2:75184213-75184232 None:intergenic 25.0%
!! AATGAGTGAAATTGGAATTT+TGG + chr5_2:75184298-75184317 Msa0788490:intron 25.0%
!! ACAAGATTTTCCTATTTGTT+TGG + chr5_2:75184418-75184437 Msa0788490:intron 25.0%
! AAGTGGTTCTTATAATTCAA+GGG - chr5_2:75184908-75184927 None:intergenic 25.0%
! AAAGTGGTTCTTATAATTCA+AGG - chr5_2:75184909-75184928 None:intergenic 25.0%
!!! ATGCAGTTTTATCATCAATT+TGG + chr5_2:75185046-75185065 Msa0788490:intron 25.0%
!!! TGCAGTTTTATCATCAATTT+GGG + chr5_2:75185047-75185066 Msa0788490:intron 25.0%
!!! CATTTTCTTGGTAATTATCA+AGG + chr5_2:75185155-75185174 Msa0788490:intron 25.0%
! GATATTGCATTCAAATGTAA+TGG + chr5_2:75185606-75185625 Msa0788490:intron 25.0%
! TATTGCATTCAAATGTAATG+GGG + chr5_2:75185608-75185627 Msa0788490:intron 25.0%
! ATATTTCATGGAACAAAACA+GGG - chr5_2:75186517-75186536 None:intergenic 25.0%
! TATATTTCATGGAACAAAAC+AGG - chr5_2:75186518-75186537 None:intergenic 25.0%
! TTAGAAATAGACATAACTGA+TGG + chr5_2:75186614-75186633 Msa0788490:intron 25.0%
! CCCAAAAAGTGATTATAAAT+AGG - chr5_2:75186739-75186758 None:intergenic 25.0%
! GATTATTCATTTCACTAACA+CGG - chr5_2:75186841-75186860 None:intergenic 25.0%
!! TCTAACAGCACAAATTTTTA+AGG + chr5_2:75186859-75186878 Msa0788490:intron 25.0%
!! CTAACAGCACAAATTTTTAA+GGG + chr5_2:75186860-75186879 Msa0788490:intron 25.0%
!!! TAACAGCACAAATTTTTAAG+GGG + chr5_2:75186861-75186880 Msa0788490:intron 25.0%
!!! ATTGACTTGTGAATCTTATT+GGG + chr5_2:75186891-75186910 Msa0788490:intron 25.0%
! TTTCTGTAAATATAAGCAAG+AGG - chr5_2:75187009-75187028 None:intergenic 25.0%
!! TGATATTGAGTACATTTTGA+TGG - chr5_2:75187036-75187055 None:intergenic 25.0%
!! ATCTAAGGAGATATTTTTCT+AGG - chr5_2:75187226-75187245 None:intergenic 25.0%
! GGTAAAAAATGTTCATGATA+AGG - chr5_2:75187695-75187714 None:intergenic 25.0%
! AATCTTGTTGAAATTGAGTT+TGG - chr5_2:75188028-75188047 None:intergenic 25.0%
! AAAATAATGTAAACAGCCAA+GGG + chr5_2:75188119-75188138 Msa0788490:CDS 25.0%
! ACGACAATAATATAAGCATT+AGG - chr5_2:75188356-75188375 None:intergenic 25.0%
!! GAGATTTCTTTTCTTACAAA+TGG + chr5_2:75188764-75188783 Msa0788490:CDS 25.0%
!!! CTTCTCTTATAGTTTTTTCT+AGG - chr5_2:75189111-75189130 None:intergenic 25.0%
!!! AGCTTTATTTTATTCTTTGC+AGG + chr5_2:75189299-75189318 Msa0788490:intron 25.0%
! AATACTATCACAATTAGCTA+CGG + chr5_2:75189398-75189417 Msa0788490:CDS 25.0%
! GGTTGTTTGGTTAAAATATT+TGG - chr5_2:75189481-75189500 None:intergenic 25.0%
! TTTCTTAACTCATTTGCATT+GGG - chr5_2:75189624-75189643 None:intergenic 25.0%
! ATTTCTTAACTCATTTGCAT+TGG - chr5_2:75189625-75189644 None:intergenic 25.0%
!!! GAAATTAAACTTGTTATTGC+TGG + chr5_2:75189640-75189659 Msa0788490:intron 25.0%
!! TAGAGTTTTCACTACATTAT+AGG - chr5_2:75189994-75190013 None:intergenic 25.0%
! CGAATATGAAATTATGATAC+AGG - chr5_2:75190390-75190409 None:intergenic 25.0%
! AAACATATATAACCTGATGT+TGG - chr5_2:75190503-75190522 None:intergenic 25.0%
! AACATCAGGTTATATATGTT+TGG + chr5_2:75190502-75190521 Msa0788490:three_prime_UTR 25.0%
!! TATATAATTTTCAGTTCACG+TGG + chr5_2:75190529-75190548 Msa0788490:three_prime_UTR 25.0%
!! GATTTGTTGGATTACTGTTT+CGG - chr5_2:75183875-75183894 None:intergenic 30.0%
! AGAACAGTGTTGAATGTTAA+TGG - chr5_2:75183927-75183946 None:intergenic 30.0%
! AAGTGATTTTCCTTGTTCTA+TGG + chr5_2:75183971-75183990 Msa0788490:exon 30.0%
! AAAACCGAAGCTTTAACAAT+GGG - chr5_2:75184068-75184087 None:intergenic 30.0%
! AAAAACCGAAGCTTTAACAA+TGG - chr5_2:75184069-75184088 None:intergenic 30.0%
! ATGATTTGGCACAATAAAAG+AGG + chr5_2:75184351-75184370 Msa0788490:intron 30.0%
!! TGACATCCATAAGTTGTTTT+CGG - chr5_2:75184601-75184620 None:intergenic 30.0%
! ATACTTTAAGCAGCTTTATC+TGG + chr5_2:75184837-75184856 Msa0788490:intron 30.0%
AGTGGTTCTTATAATTCAAG+GGG - chr5_2:75184907-75184926 None:intergenic 30.0%
! TTTTGTTAGGAGTCTACATT+GGG - chr5_2:75184945-75184964 None:intergenic 30.0%
! GTTTTATCATCAATTTGGGA+TGG + chr5_2:75185051-75185070 Msa0788490:intron 30.0%
!! AAAAGGTATTCGGGTATTTA+TGG + chr5_2:75185104-75185123 Msa0788490:intron 30.0%
GTCACAAAAAACACAATCTT+GGG - chr5_2:75185239-75185258 None:intergenic 30.0%
!!! TGTTTTTTGTGACGAATTTG+TGG + chr5_2:75185246-75185265 Msa0788490:intron 30.0%
AACTGCCCAAGTAAATTAAA+TGG - chr5_2:75185356-75185375 None:intergenic 30.0%
! ATTTAATTTACTTGGGCAGT+TGG + chr5_2:75185355-75185374 Msa0788490:intron 30.0%
AGGCTAATAATAAAAGGTTG+AGG + chr5_2:75185393-75185412 Msa0788490:intron 30.0%
AATAATAAAAGGTTGAGGCA+TGG + chr5_2:75185398-75185417 Msa0788490:intron 30.0%
AAGGATGTTTATCAATGTTG+TGG + chr5_2:75185475-75185494 Msa0788490:intron 30.0%
TACATTTGAATGCAATATCC+CGG - chr5_2:75185605-75185624 None:intergenic 30.0%
!! TGGGATTATTTTGTAGATCA+GGG + chr5_2:75185789-75185808 Msa0788490:intron 30.0%
TTTAGAGATGTGTGTAATTG+AGG + chr5_2:75185949-75185968 Msa0788490:intron 30.0%
TCTCAACATTTCTTTGTTAC+AGG + chr5_2:75186050-75186069 Msa0788490:intron 30.0%
TGTACTTTATTGTGCAACTT+AGG + chr5_2:75186345-75186364 Msa0788490:intron 30.0%
ATGTCAAGCAAAGTCAATAT+TGG - chr5_2:75186378-75186397 None:intergenic 30.0%
GGACTATAATGATAAGTAGA+TGG - chr5_2:75186559-75186578 None:intergenic 30.0%
!! GTTATGTCTATTTCTAACAG+AGG - chr5_2:75186611-75186630 None:intergenic 30.0%
ATTAACCACCTCTTAGAATT+CGG + chr5_2:75186661-75186680 Msa0788490:intron 30.0%
!! CATTGACTTGTGAATCTTAT+TGG + chr5_2:75186890-75186909 Msa0788490:intron 30.0%
TTCTGTGTCATCATCTTTAA+TGG - chr5_2:75186935-75186954 None:intergenic 30.0%
AAACCTCAAAATTAACCCAA+AGG + chr5_2:75187079-75187098 Msa0788490:intron 30.0%
GTGTGTATCACCTTATAAAT+TGG + chr5_2:75187101-75187120 Msa0788490:intron 30.0%
CAATTTCTTCAATAGTCGTA+TGG + chr5_2:75187355-75187374 Msa0788490:intron 30.0%
GAAATGACCTATATTACAGA+GGG - chr5_2:75187409-75187428 None:intergenic 30.0%
TCTGTAATATAGGTCATTTC+CGG + chr5_2:75187409-75187428 Msa0788490:intron 30.0%
TTAAATGAGCCAAAAGAAAG+GGG - chr5_2:75187766-75187785 None:intergenic 30.0%
CTTAAATGAGCCAAAAGAAA+GGG - chr5_2:75187767-75187786 None:intergenic 30.0%
AGCAGAAATTACATAGTTAG+GGG - chr5_2:75187947-75187966 None:intergenic 30.0%
CAGCAGAAATTACATAGTTA+GGG - chr5_2:75187948-75187967 None:intergenic 30.0%
GAAAATAATGTAAACAGCCA+AGG + chr5_2:75188118-75188137 Msa0788490:CDS 30.0%
TATAACAGAACCATGCAAAT+CGG + chr5_2:75188437-75188456 Msa0788490:CDS 30.0%
AGAAGGAATTCTGAGTATAT+GGG + chr5_2:75188560-75188579 Msa0788490:CDS 30.0%
AACGAAACATAACACACTAT+TGG - chr5_2:75188649-75188668 None:intergenic 30.0%
CATTGTTATAGAATCCATGT+TGG + chr5_2:75188982-75189001 Msa0788490:intron 30.0%
! AATCCATGTTGGTAGAAAAT+AGG + chr5_2:75188993-75189012 Msa0788490:intron 30.0%
AAACTATAAGAGAAGCTATC+TGG + chr5_2:75189116-75189135 Msa0788490:intron 30.0%
!! GGCTTTAAATTGCAGTATTA+AGG - chr5_2:75189596-75189615 None:intergenic 30.0%
TGGTTTAAGAAAACAACTTG+CGG + chr5_2:75189660-75189679 Msa0788490:intron 30.0%
GCTTAAAGAAATATCTTACG+TGG + chr5_2:75189832-75189851 Msa0788490:intron 30.0%
TTGTTAGTTACTCATCGAAA+CGG + chr5_2:75189948-75189967 Msa0788490:intron 30.0%
! AGCACATTCATGTAATGTTT+TGG - chr5_2:75190051-75190070 None:intergenic 30.0%
TTATGATACAGGTTTAAGCA+GGG - chr5_2:75190379-75190398 None:intergenic 30.0%
ATTATGATACAGGTTTAAGC+AGG - chr5_2:75190380-75190399 None:intergenic 30.0%
AGAACCAAGTGTTCTAATAA+TGG + chr5_2:75190462-75190481 Msa0788490:three_prime_UTR 30.0%
AAATTCAACCGAACATTAGG+AGG - chr5_2:75184107-75184126 None:intergenic 35.0%
GGCAATTGAATGAGTGAAAT+TGG + chr5_2:75184290-75184309 Msa0788490:intron 35.0%
!! GCTCAAGAATGTTGATGATT+TGG + chr5_2:75184337-75184356 Msa0788490:intron 35.0%
! AAAAGAGGTGCAAAGATGTT+AGG + chr5_2:75184366-75184385 Msa0788490:intron 35.0%
AGTCGTTTCTCCAAACAAAT+AGG - chr5_2:75184431-75184450 None:intergenic 35.0%
AGACTGTTCATGAGAACTTA+TGG - chr5_2:75184634-75184653 None:intergenic 35.0%
! AATTTTAAGCCTCGCTGTTT+TGG + chr5_2:75184725-75184744 Msa0788490:intron 35.0%
!! TATCACCCAATGAAGTATTG+TGG - chr5_2:75184820-75184839 None:intergenic 35.0%
! CTTTTGTTAGGAGTCTACAT+TGG - chr5_2:75184946-75184965 None:intergenic 35.0%
! ATGCATTTGTTGCAACTAAG+TGG + chr5_2:75185020-75185039 Msa0788490:intron 35.0%
! CAATAGCTTTTCGAAGCATA+AGG - chr5_2:75185204-75185223 None:intergenic 35.0%
CGTCACAAAAAACACAATCT+TGG - chr5_2:75185240-75185259 None:intergenic 35.0%
GAGGAGAGGCTAATAATAAA+AGG + chr5_2:75185387-75185406 Msa0788490:intron 35.0%
TTATTTGGCATGCGACAATT+TGG + chr5_2:75185429-75185448 Msa0788490:intron 35.0%
TATTTGGCATGCGACAATTT+GGG + chr5_2:75185430-75185449 Msa0788490:intron 35.0%
TATGGTGTAGTAGGAATGAA+AGG + chr5_2:75185456-75185475 Msa0788490:intron 35.0%
GATGTTTATCAATGTTGTGG+AGG + chr5_2:75185478-75185497 Msa0788490:intron 35.0%
AGACAATACCTTGATATCCT+CGG - chr5_2:75185519-75185538 None:intergenic 35.0%
!! AGGATATCAAGGTATTGTCT+TGG + chr5_2:75185519-75185538 Msa0788490:intron 35.0%
!! ATATCAAGGTATTGTCTTGG+AGG + chr5_2:75185522-75185541 Msa0788490:intron 35.0%
ACCACTCATAGAATAAGCAA+GGG - chr5_2:75185574-75185593 None:intergenic 35.0%
CTTATTCTATGAGTGGTGTT+GGG + chr5_2:75185577-75185596 Msa0788490:intron 35.0%
ACATTTGAATGCAATATCCC+GGG - chr5_2:75185604-75185623 None:intergenic 35.0%
!! AGGTGTTTATGTTTTGCTGT+CGG + chr5_2:75185637-75185656 Msa0788490:intron 35.0%
! AGTTTGTGTGTGTTTTTCGT+AGG + chr5_2:75185747-75185766 Msa0788490:intron 35.0%
CTGATCTACAAAATAATCCC+AGG - chr5_2:75185790-75185809 None:intergenic 35.0%
!! CTGGGATTATTTTGTAGATC+AGG + chr5_2:75185788-75185807 Msa0788490:intron 35.0%
!!! GATCAGGGTGTTTTGTTTTT+TGG + chr5_2:75185804-75185823 Msa0788490:intron 35.0%
! TGCTTCTTTAGTTTCACTTC+TGG + chr5_2:75185997-75186016 Msa0788490:intron 35.0%
CTTTGTTACAGGAAAGACAA+AGG + chr5_2:75186061-75186080 Msa0788490:intron 35.0%
ACAAAGGCAATACCTGAAAA+TGG + chr5_2:75186077-75186096 Msa0788490:CDS 35.0%
CAAAGGCAATACCTGAAAAT+GGG + chr5_2:75186078-75186097 Msa0788490:CDS 35.0%
!!! TTCATCGGCTTTTATTGGAA+AGG + chr5_2:75186265-75186284 Msa0788490:CDS 35.0%
GTTCGTTCTATACACTTTAC+AGG + chr5_2:75186310-75186329 Msa0788490:intron 35.0%
TTACTCGAGTATGAGATGTA+GGG - chr5_2:75186409-75186428 None:intergenic 35.0%
TAACACATTTCCCAAAGGAA+GGG + chr5_2:75186426-75186445 Msa0788490:intron 35.0%
GTGACATATTTCGTCATTGA+GGG - chr5_2:75186580-75186599 None:intergenic 35.0%
! AGGTGGTTAATTGACTTAAC+GGG - chr5_2:75186652-75186671 None:intergenic 35.0%
! GAGGTGGTTAATTGACTTAA+CGG - chr5_2:75186653-75186672 None:intergenic 35.0%
TTAACCACCTCTTAGAATTC+GGG + chr5_2:75186662-75186681 Msa0788490:intron 35.0%
!! CCTTATATGCTGATTTCGTA+GGG - chr5_2:75186704-75186723 None:intergenic 35.0%
!! ACCTTATATGCTGATTTCGT+AGG - chr5_2:75186705-75186724 None:intergenic 35.0%
GAAATCAGCATATAAGGTGA+GGG + chr5_2:75186707-75186726 Msa0788490:intron 35.0%
GTCTCACGTAAAATGTGATA+TGG - chr5_2:75186762-75186781 None:intergenic 35.0%
GTGTCATCATCTTTAATGGT+TGG - chr5_2:75186931-75186950 None:intergenic 35.0%
!! ACACCTTTGGGTTAATTTTG+AGG - chr5_2:75187085-75187104 None:intergenic 35.0%
ATAAGGTGATACACACCTTT+GGG - chr5_2:75187097-75187116 None:intergenic 35.0%
TATAAGGTGATACACACCTT+TGG - chr5_2:75187098-75187117 None:intergenic 35.0%
AAATATCTCCTTAGATCACC+AGG + chr5_2:75187230-75187249 Msa0788490:intron 35.0%
GTCTTTACCCTCTGTAATAT+AGG + chr5_2:75187399-75187418 Msa0788490:intron 35.0%
GGAAATGACCTATATTACAG+AGG - chr5_2:75187640-75187659 None:intergenic 35.0%
!!! GTTTTGATTTACCCCCTAAT+AGG + chr5_2:75187484-75187503 Msa0788490:intron 35.0%
!! TTTTTGTTTGGCCTATTAGG+GGG - chr5_2:75187498-75187517 None:intergenic 35.0%
!! GTTTTTGTTTGGCCTATTAG+GGG - chr5_2:75187499-75187518 None:intergenic 35.0%
!! CGTTTTTGTTTGGCCTATTA+GGG - chr5_2:75187500-75187519 None:intergenic 35.0%
!! TCGTTTTTGTTTGGCCTATT+AGG - chr5_2:75187501-75187520 None:intergenic 35.0%
AAATTTACAGTGGGGAAAAC+CGG + chr5_2:75187619-75187638 Msa0788490:intron 35.0%
CCTGTAATATAGGTCATTTC+CGG - chr5_2:75187641-75187660 None:intergenic 35.0%
CGGAAATGACCTATATTACA+GGG + chr5_2:75187639-75187658 Msa0788490:intron 35.0%
GGAAATGACCTATATTACAG+GGG + chr5_2:75187640-75187659 Msa0788490:intron 35.0%
GAAATGACCTATATTACAGG+GGG + chr5_2:75187641-75187660 Msa0788490:intron 35.0%
AAATGACCTATATTACAGGG+GGG + chr5_2:75187642-75187661 Msa0788490:intron 35.0%
CCTTAAATGAGCCAAAAGAA+AGG - chr5_2:75187768-75187787 None:intergenic 35.0%
!!! CCTTTCTTTTGGCTCATTTA+AGG + chr5_2:75187765-75187784 Msa0788490:intron 35.0%
GCAGCAGAAATTACATAGTT+AGG - chr5_2:75187949-75187968 None:intergenic 35.0%
ACTATGTAATTTCTGCTGCT+TGG + chr5_2:75187950-75187969 Msa0788490:intron 35.0%
ACGATTATTGCAACATGTAC+AGG + chr5_2:75188051-75188070 Msa0788490:intron 35.0%
TTATTGCAACATGTACAGGT+TGG + chr5_2:75188055-75188074 Msa0788490:intron 35.0%
TATGCTTGCAGATATACTCA+AGG + chr5_2:75188096-75188115 Msa0788490:CDS 35.0%
AGACTTGGACTTAATCACAA+AGG + chr5_2:75188264-75188283 Msa0788490:CDS 35.0%
CATTAGGTATGAAGTTACAG+TGG - chr5_2:75188340-75188359 None:intergenic 35.0%
CGAACCATAATGAAAGATCT+TGG - chr5_2:75188409-75188428 None:intergenic 35.0%
GAGAAGGAATTCTGAGTATA+TGG + chr5_2:75188559-75188578 Msa0788490:CDS 35.0%
AAGGTTCTTCTCTCATCAAT+AGG + chr5_2:75188600-75188619 Msa0788490:intron 35.0%
AGGTTCTTCTCTCATCAATA+GGG + chr5_2:75188601-75188620 Msa0788490:intron 35.0%
GAACAACAGCATCATTGTAT+GGG - chr5_2:75188796-75188815 None:intergenic 35.0%
!! TAATTTTGGAAGGCATACCT+TGG - chr5_2:75188888-75188907 None:intergenic 35.0%
! GATGGAGTTGTAATTTTGGA+AGG - chr5_2:75188898-75188917 None:intergenic 35.0%
TCCAAAATTACAACTCCATC+TGG + chr5_2:75188898-75188917 Msa0788490:intron 35.0%
! TCCAGATGGAGTTGTAATTT+TGG - chr5_2:75188902-75188921 None:intergenic 35.0%
TACTTATAGTTGAGTCCAGA+TGG - chr5_2:75188916-75188935 None:intergenic 35.0%
! AAGCCTATTTTCTACCAACA+TGG - chr5_2:75188999-75189018 None:intergenic 35.0%
! TGTTGGTAGAAAATAGGCTT+AGG + chr5_2:75188999-75189018 Msa0788490:intron 35.0%
! AAAATAGGCTTAGGTGGTTT+TGG + chr5_2:75189008-75189027 Msa0788490:intron 35.0%
TAGGAGAGTGAGATCAAAAT+AGG + chr5_2:75189075-75189094 Msa0788490:intron 35.0%
TATTCTTTGCAGGAATTCAG+CGG + chr5_2:75189309-75189328 Msa0788490:intron 35.0%
TACGGATCTTTCATTACTTC+AGG + chr5_2:75189416-75189435 Msa0788490:CDS 35.0%
!! ACACGAGTTTTATGGTTGTT+TGG - chr5_2:75189494-75189513 None:intergenic 35.0%
! TGATCTACACACGAGTTTTA+TGG - chr5_2:75189502-75189521 None:intergenic 35.0%
! TCTGTTTTGTACTTGCACAA+AGG + chr5_2:75189696-75189715 Msa0788490:intron 35.0%
! CTGTTTTGTACTTGCACAAA+GGG + chr5_2:75189697-75189716 Msa0788490:intron 35.0%
CTAACTCTGTGATATCTTTC+TGG + chr5_2:75190159-75190178 Msa0788490:intron 35.0%
! ATGTTTTTCTAAACGCTACG+CGG + chr5_2:75190228-75190247 Msa0788490:intron 35.0%
TTCAGAACAGTTTCCTTTGT+GGG - chr5_2:75190354-75190373 None:intergenic 35.0%
ATTCAGAACAGTTTCCTTTG+TGG - chr5_2:75190355-75190374 None:intergenic 35.0%
CTCTCCATTATTAGAACACT+TGG - chr5_2:75190469-75190488 None:intergenic 35.0%
GTCATTCTTTATCCAACATC+AGG + chr5_2:75190488-75190507 Msa0788490:three_prime_UTR 35.0%
TTGCTAGAAGAGATGTTGAT+TGG - chr5_2:75190577-75190596 None:intergenic 35.0%
TTGTTGGATTACTGTTTCGG+AGG - chr5_2:75183872-75183891 None:intergenic 40.0%
CATTGAAGAGCCATAGAACA+AGG - chr5_2:75183984-75184003 None:intergenic 40.0%
TGTTCTATGGCTCTTCAATG+TGG + chr5_2:75183984-75184003 Msa0788490:exon 40.0%
TTCTTTCTGCTTCACAAGTG+TGG + chr5_2:75184007-75184026 Msa0788490:CDS 40.0%
TGAATTTAGCTGAACCAGGA+GGG - chr5_2:75184040-75184059 None:intergenic 40.0%
ATGAATTTAGCTGAACCAGG+AGG - chr5_2:75184041-75184060 None:intergenic 40.0%
TGGATGAATTTAGCTGAACC+AGG - chr5_2:75184044-75184063 None:intergenic 40.0%
CCAACCCATTGTTAAAGCTT+CGG + chr5_2:75184061-75184080 Msa0788490:CDS 40.0%
TTAGGAGGAGAATGAGATGA+AGG - chr5_2:75184092-75184111 None:intergenic 40.0%
CTCATTCTCCTCCTAATGTT+CGG + chr5_2:75184096-75184115 Msa0788490:CDS 40.0%
GATGCTGATGCATTGAAGAT+TGG + chr5_2:75184182-75184201 Msa0788490:intron 40.0%
GTGAGTTTGACTCTCTCTTA+AGG - chr5_2:75184400-75184419 None:intergenic 40.0%
!! AGTTGTTTTCGTAAGCTAGC+TGG + chr5_2:75184557-75184576 Msa0788490:intron 40.0%
ATTGGGCCGAAAACAACTTA+TGG + chr5_2:75184592-75184611 Msa0788490:intron 40.0%
AGCGAGGCTTAAAATTCAAG+GGG - chr5_2:75184721-75184740 None:intergenic 40.0%
CAGCGAGGCTTAAAATTCAA+GGG - chr5_2:75184722-75184741 None:intergenic 40.0%
ACAGCGAGGCTTAAAATTCA+AGG - chr5_2:75184723-75184742 None:intergenic 40.0%
CATTGTTAGGAGTCTCACAT+TGG - chr5_2:75184761-75184780 None:intergenic 40.0%
TCAAACAGTGGTGCATTGTT+AGG - chr5_2:75184774-75184793 None:intergenic 40.0%
TCCACTCCACAATACTTCAT+TGG + chr5_2:75184811-75184830 Msa0788490:intron 40.0%
CCACTCCACAATACTTCATT+GGG + chr5_2:75184812-75184831 Msa0788490:intron 40.0%
GGGAAGTCTTACCTAAAAAG+TGG - chr5_2:75184925-75184944 None:intergenic 40.0%
! CATTTGTTGCAACTAAGTGG+AGG + chr5_2:75185023-75185042 Msa0788490:intron 40.0%
! AATTTGGGATGGTGCTTGAA+GGG + chr5_2:75185062-75185081 Msa0788490:intron 40.0%
! AGTTAGTCCTTTGGAGGAAA+AGG + chr5_2:75185087-75185106 Msa0788490:intron 40.0%
!! CCTTTGGAGGAAAAGGTATT+CGG + chr5_2:75185094-75185113 Msa0788490:intron 40.0%
!! CTTTGGAGGAAAAGGTATTC+GGG + chr5_2:75185095-75185114 Msa0788490:intron 40.0%
GAAAATGCTACCACCTTAGA+TGG - chr5_2:75185142-75185161 None:intergenic 40.0%
! CTAAGGTGGTAGCATTTTCT+TGG + chr5_2:75185143-75185162 Msa0788490:intron 40.0%
AGCATAAGGTTTCGTCTAGT+TGG - chr5_2:75185190-75185209 None:intergenic 40.0%
ACACAATCTTGGGAACTTTG+TGG - chr5_2:75185229-75185248 None:intergenic 40.0%
!! GGCATGGTCTTATGCTTATT+TGG + chr5_2:75185414-75185433 Msa0788490:intron 40.0%
ATGCGACAATTTGGGTGATA+TGG + chr5_2:75185438-75185457 Msa0788490:intron 40.0%
TTTGGGTGATATGGTGTAGT+AGG + chr5_2:75185447-75185466 Msa0788490:intron 40.0%
CCACTCATAGAATAAGCAAG+GGG - chr5_2:75185573-75185592 None:intergenic 40.0%
CACCACTCATAGAATAAGCA+AGG - chr5_2:75185575-75185594 None:intergenic 40.0%
GCTTATTCTATGAGTGGTGT+TGG + chr5_2:75185576-75185595 Msa0788490:intron 40.0%
! CATTCAAATGTAATGGGGCA+CGG + chr5_2:75185613-75185632 Msa0788490:intron 40.0%
!! GGTGTTTATGTTTTGCTGTC+GGG + chr5_2:75185638-75185657 Msa0788490:intron 40.0%
ACACAAACAGCACAAACCAA+GGG - chr5_2:75185702-75185721 None:intergenic 40.0%
AACACAAACAGCACAAACCA+AGG - chr5_2:75185703-75185722 None:intergenic 40.0%
ACAAACTGTGCACAAAACTC+AGG - chr5_2:75185734-75185753 None:intergenic 40.0%
!!! CAGGGTGTTTTGTTTTTTGG+TGG + chr5_2:75185807-75185826 Msa0788490:intron 40.0%
! GATTTTGTCCCAACTGTTAG+TGG + chr5_2:75186155-75186174 Msa0788490:CDS 40.0%
AAGAAAGGCCACTAACAGTT+GGG - chr5_2:75186166-75186185 None:intergenic 40.0%
AAAGAAAGGCCACTAACAGT+TGG - chr5_2:75186167-75186186 None:intergenic 40.0%
AACTGTTAGTGGCCTTTCTT+TGG + chr5_2:75186166-75186185 Msa0788490:CDS 40.0%
! TGATGCACCGGCATTTAAAA+AGG + chr5_2:75186190-75186209 Msa0788490:CDS 40.0%
TCTATACACTTTACAGGCGA+AGG + chr5_2:75186316-75186335 Msa0788490:intron 40.0%
GTTACTCGAGTATGAGATGT+AGG - chr5_2:75186410-75186429 None:intergenic 40.0%
TCGAGTAACACATTTCCCAA+AGG + chr5_2:75186421-75186440 Msa0788490:intron 40.0%
GTAACACATTTCCCAAAGGA+AGG + chr5_2:75186425-75186444 Msa0788490:intron 40.0%
GGTGACATATTTCGTCATTG+AGG - chr5_2:75186581-75186600 None:intergenic 40.0%
!! TGTCTATTTCTAACAGAGGC+TGG - chr5_2:75186607-75186626 None:intergenic 40.0%
! ATTGACTTAACGGGTCATGT+TGG - chr5_2:75186643-75186662 None:intergenic 40.0%
ACTCATACCCGAATTCTAAG+AGG - chr5_2:75186672-75186691 None:intergenic 40.0%
CCCTACGAAATCAGCATATA+AGG + chr5_2:75186701-75186720 Msa0788490:intron 40.0%
CGAAATCAGCATATAAGGTG+AGG + chr5_2:75186706-75186725 Msa0788490:intron 40.0%
TTCCGTAAAACTGTAGAGCA+GGG - chr5_2:75187131-75187150 None:intergenic 40.0%
ATTCCGTAAAACTGTAGAGC+AGG - chr5_2:75187132-75187151 None:intergenic 40.0%
AGAACAAATTTCGTGCCTTC+AGG - chr5_2:75187262-75187281 None:intergenic 40.0%
! AGGCACGAAATTTGTTCTAG+AGG + chr5_2:75187264-75187283 Msa0788490:intron 40.0%
!! ATTTGTTCTAGAGGCGAACA+AGG + chr5_2:75187273-75187292 Msa0788490:intron 40.0%
!! GCATTCAGAGATGGGTTAAT+AGG + chr5_2:75187377-75187396 Msa0788490:intron 40.0%
AAACTTTACAGGGGGAAAAC+CGG - chr5_2:75187431-75187450 None:intergenic 40.0%
!!! GGTTTTTTGTTTGGCCTACT+CGG + chr5_2:75187548-75187567 Msa0788490:intron 40.0%
!!! GTTTTTTGTTTGGCCTACTC+GGG + chr5_2:75187549-75187568 Msa0788490:intron 40.0%
!!! TTTTTTGTTTGGCCTACTCG+GGG + chr5_2:75187550-75187569 Msa0788490:intron 40.0%
CCGGAAATGACCTATATTAC+AGG + chr5_2:75187638-75187657 Msa0788490:intron 40.0%
TCTTTACCCCCCTGTAATAT+AGG - chr5_2:75187651-75187670 None:intergenic 40.0%
CATGATAAGGGATCTCTGAA+GGG - chr5_2:75187682-75187701 None:intergenic 40.0%
TCATGATAAGGGATCTCTGA+AGG - chr5_2:75187683-75187702 None:intergenic 40.0%
! AACAACTCACCCCTTTCTTT+TGG + chr5_2:75187754-75187773 Msa0788490:intron 40.0%
AATAATACACGGTTCCTTGC+CGG + chr5_2:75187820-75187839 Msa0788490:intron 40.0%
AATGGAGCTACTCATCAAAC+CGG - chr5_2:75187842-75187861 None:intergenic 40.0%
TAGGGTAACAAATGCTAAGG+CGG - chr5_2:75188170-75188189 None:intergenic 40.0%
CCTTAGGGTAACAAATGCTA+AGG - chr5_2:75188173-75188192 None:intergenic 40.0%
! CCTTAGCATTTGTTACCCTA+AGG + chr5_2:75188170-75188189 Msa0788490:CDS 40.0%
TTTGTTACCCTAAGGAGTGA+TGG + chr5_2:75188178-75188197 Msa0788490:CDS 40.0%
! CCAAGTCTAGTTCATCTTCT+TGG - chr5_2:75188252-75188271 None:intergenic 40.0%
CCAAGAAGATGAACTAGACT+TGG + chr5_2:75188249-75188268 Msa0788490:CDS 40.0%
CAGGCCAAGATCTTTCATTA+TGG + chr5_2:75188402-75188421 Msa0788490:intron 40.0%
ATAAAGGAAGCCTCAGGTTA+GGG - chr5_2:75188518-75188537 None:intergenic 40.0%
CGAACAACAGCATCATTGTA+TGG - chr5_2:75188797-75188816 None:intergenic 40.0%
! ACAAGGAGTAGTTTGAGGTT+TGG - chr5_2:75188833-75188852 None:intergenic 40.0%
AAACTACTCCTTGTTACCGA+AGG + chr5_2:75188839-75188858 Msa0788490:CDS 40.0%
TGGTAGAAAATAGGCTTAGG+TGG + chr5_2:75189002-75189021 Msa0788490:intron 40.0%
CTTAACTCATTTGCATTGGG+TGG - chr5_2:75189621-75189640 None:intergenic 40.0%
GTGCAAGTACAAAACAGAAG+CGG - chr5_2:75189694-75189713 None:intergenic 40.0%
CGAAACGGACCCTTAAATTT+AGG + chr5_2:75189963-75189982 Msa0788490:intron 40.0%
CGGTTTAAACTTGCAGAAAG+AGG + chr5_2:75190248-75190267 Msa0788490:intron 40.0%
TACTGTTTCGGAGGAAGCAA+AGG - chr5_2:75183863-75183882 None:intergenic 45.0%
! CCGAAGCTTTAACAATGGGT+TGG - chr5_2:75184064-75184083 None:intergenic 45.0%
TAAGCTAGCTGGAGAGCTTA+TGG + chr5_2:75184568-75184587 Msa0788490:intron 45.0%
AGCTGGAGAGCTTATGGAAT+TGG + chr5_2:75184574-75184593 Msa0788490:intron 45.0%
GCTGGAGAGCTTATGGAATT+GGG + chr5_2:75184575-75184594 Msa0788490:intron 45.0%
GATAGCTTACCAAAACAGCG+AGG - chr5_2:75184737-75184756 None:intergenic 45.0%
!! CCCAATGAAGTATTGTGGAG+TGG - chr5_2:75184815-75184834 None:intergenic 45.0%
AAACCTCCATCGTCAAAGTC+TGG + chr5_2:75184864-75184883 Msa0788490:intron 45.0%
AAGGGGTTCTCTCATCTAAG+AGG - chr5_2:75184890-75184909 None:intergenic 45.0%
! GCAGTAGCTCGACTTTTGTT+AGG - chr5_2:75184958-75184977 None:intergenic 45.0%
! CAATTTGGGATGGTGCTTGA+AGG + chr5_2:75185061-75185080 Msa0788490:intron 45.0%
! ATTTGGGATGGTGCTTGAAG+GGG + chr5_2:75185063-75185082 Msa0788490:intron 45.0%
TGAAGGGGAAGTTAGTCCTT+TGG + chr5_2:75185078-75185097 Msa0788490:intron 45.0%
! CCGAATACCTTTTCCTCCAA+AGG - chr5_2:75185097-75185116 None:intergenic 45.0%
CGGGTATTTATGGAAGAGTC+CGG + chr5_2:75185114-75185133 Msa0788490:intron 45.0%
ACATTGCCGAGTCATACCAA+AGG + chr5_2:75185291-75185310 Msa0788490:intron 45.0%
TCCACACCTTTGGTATGACT+CGG - chr5_2:75185300-75185319 None:intergenic 45.0%
! AGTCATACCAAAGGTGTGGA+GGG + chr5_2:75185300-75185319 Msa0788490:intron 45.0%
AAAATCACCCTCCACACCTT+TGG - chr5_2:75185310-75185329 None:intergenic 45.0%
! TGTGGAGGGTGATTTTCGAT+TGG + chr5_2:75185314-75185333 Msa0788490:intron 45.0%
TACTTGGGCAGTTGGAATGT+TGG + chr5_2:75185363-75185382 Msa0788490:intron 45.0%
TGTGGAGGAGAGTGATGTTA+TGG + chr5_2:75185493-75185512 Msa0788490:intron 45.0%
TGTTATGGCCGAGGATATCA+AGG + chr5_2:75185508-75185527 Msa0788490:intron 45.0%
!! TCAAGGTATTGTCTTGGAGG+TGG + chr5_2:75185525-75185544 Msa0788490:intron 45.0%
CCCCTTGCTTATTCTATGAG+TGG + chr5_2:75185570-75185589 Msa0788490:intron 45.0%
!! TTATGTTTTGCTGTCGGGAG+AGG + chr5_2:75185643-75185662 Msa0788490:intron 45.0%
!! CTTGTTCAGGGGTTTGGTTT+TGG + chr5_2:75185673-75185692 Msa0788490:intron 45.0%
! CGTAGGTGTGACAACTGTTT+TGG + chr5_2:75185764-75185783 Msa0788490:intron 45.0%
!!! TGTGACAACTGTTTTGGCCT+GGG + chr5_2:75185770-75185789 Msa0788490:intron 45.0%
GTGAAATGGCGAGCAAAGAA+GGG - chr5_2:75185879-75185898 None:intergenic 45.0%
AGTGAAATGGCGAGCAAAGA+AGG - chr5_2:75185880-75185899 None:intergenic 45.0%
GCCATTTCACTACTAGTGGT+GGG + chr5_2:75185889-75185908 Msa0788490:intron 45.0%
ACCCACCACTAGTAGTGAAA+TGG - chr5_2:75185893-75185912 None:intergenic 45.0%
AAATGGGAGCCCTGAAACAA+AGG + chr5_2:75186094-75186113 Msa0788490:CDS 45.0%
! GAGGCGATTCCTTTGTTTCA+GGG - chr5_2:75186106-75186125 None:intergenic 45.0%
! AGAGGCGATTCCTTTGTTTC+AGG - chr5_2:75186107-75186126 None:intergenic 45.0%
TGAAACAAAGGAATCGCCTC+TGG + chr5_2:75186106-75186125 Msa0788490:CDS 45.0%
! CCTGGAGCCTTTTTAAATGC+CGG - chr5_2:75186200-75186219 None:intergenic 45.0%
GCATTTAAAAAGGCTCCAGG+TGG + chr5_2:75186200-75186219 Msa0788490:CDS 45.0%
ATGCCTACAGCAACATTAGC+AGG - chr5_2:75186230-75186249 None:intergenic 45.0%
ATCCCGATTAGGAGGTTCAT+CGG + chr5_2:75186250-75186269 Msa0788490:CDS 45.0%
AAGCCGATGAACCTCCTAAT+CGG - chr5_2:75186256-75186275 None:intergenic 45.0%
!!! GGAGGTTCATCGGCTTTTAT+TGG + chr5_2:75186260-75186279 Msa0788490:CDS 45.0%
CCAAGCAATACCCTTCCTTT+GGG - chr5_2:75186439-75186458 None:intergenic 45.0%
ACCAAGCAATACCCTTCCTT+TGG - chr5_2:75186440-75186459 None:intergenic 45.0%
ATTTCTAACAGAGGCTGGCA+TGG - chr5_2:75186602-75186621 None:intergenic 45.0%
! CATACCCGAATTCTAAGAGG+TGG - chr5_2:75186669-75186688 None:intergenic 45.0%
! GCAGGGCACTCCAATTTATA+AGG - chr5_2:75187114-75187133 None:intergenic 45.0%
! TGCCCTGCTCTACAGTTTTA+CGG + chr5_2:75187126-75187145 Msa0788490:intron 45.0%
AGTCGTATGGCATTCAGAGA+TGG + chr5_2:75187368-75187387 Msa0788490:intron 45.0%
GTCGTATGGCATTCAGAGAT+GGG + chr5_2:75187369-75187388 Msa0788490:intron 45.0%
!! TTTTTGTTTGGCCTACTCGG+GGG + chr5_2:75187551-75187570 Msa0788490:intron 45.0%
!!! TTTTGATTTACCCCCCGAGT+AGG - chr5_2:75187565-75187584 None:intergenic 45.0%
! GGGATCTCTGAAGGGTTAAT+AGG - chr5_2:75187674-75187693 None:intergenic 45.0%
!! CAGGTTGGTGAGGATGAATT+CGG + chr5_2:75188070-75188089 Msa0788490:intron 45.0%
TCGTTCTCCATCACTCCTTA+GGG - chr5_2:75188188-75188207 None:intergenic 45.0%
! TGGAGAAGCATATCAGCACT+GGG - chr5_2:75188232-75188251 None:intergenic 45.0%
! TTGGAGAAGCATATCAGCAC+TGG - chr5_2:75188233-75188252 None:intergenic 45.0%
TGTCTTATGACCCTAACCTG+AGG + chr5_2:75188505-75188524 Msa0788490:CDS 45.0%
CATAAAGGAAGCCTCAGGTT+AGG - chr5_2:75188519-75188538 None:intergenic 45.0%
CTAACCTGAGGCTTCCTTTA+TGG + chr5_2:75188517-75188536 Msa0788490:CDS 45.0%
CTATCTGCAGAAGGCCATAA+AGG - chr5_2:75188534-75188553 None:intergenic 45.0%
TCTCTAGCACTATCTGCAGA+AGG - chr5_2:75188543-75188562 None:intergenic 45.0%
TCTGCAGATAGTGCTAGAGA+AGG + chr5_2:75188543-75188562 Msa0788490:CDS 45.0%
GGAGACTGCAGATATCATCA+AGG + chr5_2:75188581-75188600 Msa0788490:CDS 45.0%
! GGAGTAGTTTGAGGTTTGGA+TGG - chr5_2:75188829-75188848 None:intergenic 45.0%
CGGTAACAAGGAGTAGTTTG+AGG - chr5_2:75188838-75188857 None:intergenic 45.0%
TCGTACGAAGAGTAGATCAG+AGG + chr5_2:75189052-75189071 Msa0788490:intron 45.0%
ACGAAGAGTAGATCAGAGGT+AGG + chr5_2:75189056-75189075 Msa0788490:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr5_2:75189218-75189237 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr5_2:75189219-75189238 None:intergenic 45.0%
ACTTGCACAAAGGGCTCATT+TGG + chr5_2:75189706-75189725 Msa0788490:intron 45.0%
CTCAAGTTTGCCAATGCTTG+TGG + chr5_2:75190288-75190307 Msa0788490:CDS 45.0%
AGTCAATGCACCACAAGCAT+TGG - chr5_2:75190301-75190320 None:intergenic 45.0%
AATACCAGCATTGCCCACAA+AGG + chr5_2:75190338-75190357 Msa0788490:CDS 45.0%
TCAGTTCACGTGGTTGCATA+TGG + chr5_2:75190539-75190558 Msa0788490:three_prime_UTR 45.0%
!! TTATTATAAATAATAATACA+CGG + chr5_2:75187809-75187828 Msa0788490:intron 5.0%
!! ATTATATAACTTAAAATATT+AGG - chr5_2:75187877-75187896 None:intergenic 5.0%
AGTGTGGTTTCTAACCCTCC+TGG + chr5_2:75184023-75184042 Msa0788490:CDS 50.0%
GGTCGTCAACTCTCAAACAG+TGG - chr5_2:75184786-75184805 None:intergenic 50.0%
AGTATTGTGGAGTGGACGTG+AGG - chr5_2:75184807-75184826 None:intergenic 50.0%
AAGAGGCCAGACTTTGACGA+TGG - chr5_2:75184873-75184892 None:intergenic 50.0%
AGGGGAAGTTAGTCCTTTGG+AGG + chr5_2:75185081-75185100 Msa0788490:intron 50.0%
! GAGTCATACCAAAGGTGTGG+AGG + chr5_2:75185299-75185318 Msa0788490:intron 50.0%
GTTGGAATGTTGGAGAGGAG+AGG + chr5_2:75185373-75185392 Msa0788490:intron 50.0%
! CAAATGTAATGGGGCACGGA+AGG + chr5_2:75185617-75185636 Msa0788490:intron 50.0%
!! AGAGGTGCAGGTCTTGTTCA+GGG + chr5_2:75185661-75185680 Msa0788490:intron 50.0%
!!! GGTTTGGTTTTGGTGTCCCT+TGG + chr5_2:75185683-75185702 Msa0788490:intron 50.0%
!!! GTGTGACAACTGTTTTGGCC+TGG + chr5_2:75185769-75185788 Msa0788490:intron 50.0%
!!! TGTTTTTTGGTGGCAGCGTG+TGG + chr5_2:75185817-75185836 Msa0788490:intron 50.0%
!!! GTTTTTTGGTGGCAGCGTGT+GGG + chr5_2:75185818-75185837 Msa0788490:intron 50.0%
GCTCGCCATTTCACTACTAG+TGG + chr5_2:75185885-75185904 Msa0788490:intron 50.0%
CGCCATTTCACTACTAGTGG+TGG + chr5_2:75185888-75185907 Msa0788490:intron 50.0%
! GTTTCAGGGCTCCCATTTTC+AGG - chr5_2:75186092-75186111 None:intergenic 50.0%
AACAAAGGAATCGCCTCTGG+TGG + chr5_2:75186109-75186128 Msa0788490:CDS 50.0%
!! TCGCCTCTGGTGGTTTGTTT+CGG + chr5_2:75186119-75186138 Msa0788490:CDS 50.0%
TCTCCGAAACAAACCACCAG+AGG - chr5_2:75186125-75186144 None:intergenic 50.0%
CCTTTCTTTGGCTGATGCAC+CGG + chr5_2:75186178-75186197 Msa0788490:CDS 50.0%
CCGGCATTTAAAAAGGCTCC+AGG + chr5_2:75186197-75186216 Msa0788490:CDS 50.0%
GCTCCTGCTAATGTTGCTGT+AGG + chr5_2:75186224-75186243 Msa0788490:CDS 50.0%
GCTGTAGGCATATCCCGATT+AGG + chr5_2:75186239-75186258 Msa0788490:CDS 50.0%
GTAGGCATATCCCGATTAGG+AGG + chr5_2:75186242-75186261 Msa0788490:CDS 50.0%
AGCCGATGAACCTCCTAATC+GGG - chr5_2:75186255-75186274 None:intergenic 50.0%
!! CCCAAAGGAAGGGTATTGCT+TGG + chr5_2:75186436-75186455 Msa0788490:intron 50.0%
TCACCAAGTGACTGCTTAGG+TGG - chr5_2:75186818-75186837 None:intergenic 50.0%
GGTTCAGTCCTGGTGATCTA+AGG - chr5_2:75187241-75187260 None:intergenic 50.0%
ATCACCAGGACTGAACCTGA+AGG + chr5_2:75187244-75187263 Msa0788490:intron 50.0%
!! TTTTGTTTGGCCTACTCGGG+GGG + chr5_2:75187552-75187571 Msa0788490:intron 50.0%
AGCTACTCATCAAACCGGCA+AGG - chr5_2:75187837-75187856 None:intergenic 50.0%
!! GCAACATGTACAGGTTGGTG+AGG + chr5_2:75188060-75188079 Msa0788490:intron 50.0%
CTCGTTCTCCATCACTCCTT+AGG - chr5_2:75188189-75188208 None:intergenic 50.0%
! GGAGAAGCATATCAGCACTG+GGG - chr5_2:75188231-75188250 None:intergenic 50.0%
GCAAAGGCTGCAAAAGAAGC+TGG + chr5_2:75188474-75188493 Msa0788490:CDS 50.0%
AAGGCCATAAAGGAAGCCTC+AGG - chr5_2:75188524-75188543 None:intergenic 50.0%
CTTCTGCACCTTCGGTAACA+AGG - chr5_2:75188850-75188869 None:intergenic 50.0%
! CTTGTTACCGAAGGTGCAGA+AGG + chr5_2:75188848-75188867 Msa0788490:CDS 50.0%
AGGCTGCAGGTATTACACCA+AGG + chr5_2:75188868-75188887 Msa0788490:CDS 50.0%
CTTCGTACGACAGCATCTAC+AGG - chr5_2:75189042-75189061 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr5_2:75189214-75189233 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr5_2:75189220-75189239 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr5_2:75189217-75189236 Msa0788490:intron 50.0%
ACTCATTTGCATTGGGTGGC+AGG - chr5_2:75189617-75189636 None:intergenic 50.0%
TGCACAAAGGGCTCATTTGG+AGG + chr5_2:75189709-75189728 Msa0788490:intron 50.0%
!! GCATTGACTGTGACTGAGAG+AGG + chr5_2:75190312-75190331 Msa0788490:CDS 50.0%
GTTTCCTTTGTGGGCAATGC+TGG - chr5_2:75190345-75190364 None:intergenic 50.0%
AGGCCAGACTTTGACGATGG+AGG - chr5_2:75184870-75184889 None:intergenic 55.0%
GAAGAGTCCGGCTCCATCTA+AGG + chr5_2:75185126-75185145 Msa0788490:intron 55.0%
GCTACCACCTTAGATGGAGC+CGG - chr5_2:75185136-75185155 None:intergenic 55.0%
GCCGAGTCATACCAAAGGTG+TGG + chr5_2:75185296-75185315 Msa0788490:intron 55.0%
GGGCAGTTGGAATGTTGGAG+AGG + chr5_2:75185368-75185387 Msa0788490:intron 55.0%
GGAGAGTGATGTTATGGCCG+AGG + chr5_2:75185499-75185518 Msa0788490:intron 55.0%
! CTATGAGTGGTGTTGGGACC+CGG + chr5_2:75185583-75185602 Msa0788490:intron 55.0%
! TATGAGTGGTGTTGGGACCC+GGG + chr5_2:75185584-75185603 Msa0788490:intron 55.0%
!! GAGAGGTGCAGGTCTTGTTC+AGG + chr5_2:75185660-75185679 Msa0788490:intron 55.0%
!! GAGGTGCAGGTCTTGTTCAG+GGG + chr5_2:75185662-75185681 Msa0788490:intron 55.0%
!! GCAGGTCTTGTTCAGGGGTT+TGG + chr5_2:75185667-75185686 Msa0788490:intron 55.0%
CCGGTGCATCAGCCAAAGAA+AGG - chr5_2:75186181-75186200 None:intergenic 55.0%
!! ACATTAGCAGGAGCACCACC+TGG - chr5_2:75186218-75186237 None:intergenic 55.0%
ACACCAGCCAAGCATCTGCA+TGG + chr5_2:75186787-75186806 Msa0788490:intron 55.0%
CCAAGTGACTGCTTAGGTGG+TGG - chr5_2:75186815-75186834 None:intergenic 55.0%
CCACCACCTAAGCAGTCACT+TGG + chr5_2:75186812-75186831 Msa0788490:intron 55.0%
CGGTCACCAAGTGACTGCTT+AGG - chr5_2:75186821-75186840 None:intergenic 55.0%
CAGGGTCAAAACGCATCCCT+TGG - chr5_2:75188138-75188157 None:intergenic 55.0%
!! CAAGGGATGCGTTTTGACCC+TGG + chr5_2:75188136-75188155 Msa0788490:CDS 55.0%
!! GCTACGTGTGCCGATTTGCA+TGG - chr5_2:75188450-75188469 None:intergenic 55.0%
ACTAAGTGGGGTCGGCTACA+TGG - chr5_2:75189206-75189225 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG + chr5_2:75189205-75189224 Msa0788490:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG + chr5_2:75189206-75189225 Msa0788490:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG + chr5_2:75189212-75189231 Msa0788490:intron 55.0%
GCAGGAATTCAGCGGTAGAG+TGG + chr5_2:75189317-75189336 Msa0788490:intron 55.0%
GGAATTCAGCGGTAGAGTGG+CGG + chr5_2:75189320-75189339 Msa0788490:intron 55.0%
GAATTCAGCGGTAGAGTGGC+GGG + chr5_2:75189321-75189340 Msa0788490:CDS 55.0%
! TAGAGTGGCGGGAATGAAGG+TGG + chr5_2:75189332-75189351 Msa0788490:CDS 55.0%
GTGGATGCAGTTGACACCAC+TGG + chr5_2:75189351-75189370 Msa0788490:CDS 55.0%
!! AAAAGCGTCACCAGCACCAG+TGG - chr5_2:75189370-75189389 None:intergenic 55.0%
!!! TGGTGCTGGTGACGCTTTTG+TGG + chr5_2:75189371-75189390 Msa0788490:CDS 55.0%
GAGTCCGGCTCCATCTAAGG+TGG + chr5_2:75185129-75185148 Msa0788490:intron 60.0%
! TTTGCTGTCGGGAGAGGTGC+AGG + chr5_2:75185649-75185668 Msa0788490:intron 60.0%
GTGCCATGCAGATGCTTGGC+TGG - chr5_2:75186793-75186812 None:intergenic 60.0%
!! GGTGGTGCCATGCAGATGCT+TGG - chr5_2:75186797-75186816 None:intergenic 60.0%
! CGTGCCTTCAGGTTCAGTCC+TGG - chr5_2:75187251-75187270 None:intergenic 60.0%
CTAAGGCGGTACGTGCACCA+GGG - chr5_2:75188156-75188175 None:intergenic 60.0%
GGCACACGTAGCTGCAGCAA+AGG + chr5_2:75188458-75188477 Msa0788490:CDS 60.0%
CCTGCAGCCTTCTGCACCTT+CGG - chr5_2:75188858-75188877 None:intergenic 60.0%
! CGGTAGAGTGGCGGGAATGA+AGG + chr5_2:75189329-75189348 Msa0788490:CDS 60.0%
GCAGTTGACACCACTGGTGC+TGG + chr5_2:75189357-75189376 Msa0788490:CDS 60.0%
!! GCTGGTGACGCTTTTGTGGC+TGG + chr5_2:75189375-75189394 Msa0788490:CDS 60.0%
TGGCAGCGTGTGGGTCGCTT+TGG + chr5_2:75185827-75185846 Msa0788490:intron 65.0%
GCTAAGGCGGTACGTGCACC+AGG - chr5_2:75188157-75188176 None:intergenic 65.0%
! CCGAAGGTGCAGAAGGCTGC+AGG + chr5_2:75188855-75188874 Msa0788490:CDS 65.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 75183789 75190703 75183789 ID=Msa0788490;Name=Msa0788490
chr5_2 mRNA 75183789 75190703 75183789 ID=Msa0788490-mRNA-1;Parent=Msa0788490;Name=Msa0788490-mRNA-1;_AED=0.11;_eAED=0.11;_QI=201|1|1|1|1|1|7|305|385
chr5_2 exon 75183789 75184131 75183789 ID=Msa0788490-mRNA-1:exon:22971;Parent=Msa0788490-mRNA-1
chr5_2 exon 75186072 75186286 75186072 ID=Msa0788490-mRNA-1:exon:22972;Parent=Msa0788490-mRNA-1
chr5_2 exon 75188073 75188285 75188073 ID=Msa0788490-mRNA-1:exon:22973;Parent=Msa0788490-mRNA-1
chr5_2 exon 75188405 75188602 75188405 ID=Msa0788490-mRNA-1:exon:22974;Parent=Msa0788490-mRNA-1
chr5_2 exon 75188752 75188889 75188752 ID=Msa0788490-mRNA-1:exon:22975;Parent=Msa0788490-mRNA-1
chr5_2 exon 75189321 75189437 75189321 ID=Msa0788490-mRNA-1:exon:22976;Parent=Msa0788490-mRNA-1
chr5_2 exon 75190264 75190703 75190264 ID=Msa0788490-mRNA-1:exon:22977;Parent=Msa0788490-mRNA-1
chr5_2 five_prime_UTR 75183789 75183989 75183789 ID=Msa0788490-mRNA-1:five_prime_utr;Parent=Msa0788490-mRNA-1
chr5_2 CDS 75183990 75184131 75183990 ID=Msa0788490-mRNA-1:cds;Parent=Msa0788490-mRNA-1
chr5_2 CDS 75186072 75186286 75186072 ID=Msa0788490-mRNA-1:cds;Parent=Msa0788490-mRNA-1
chr5_2 CDS 75188073 75188285 75188073 ID=Msa0788490-mRNA-1:cds;Parent=Msa0788490-mRNA-1
chr5_2 CDS 75188405 75188602 75188405 ID=Msa0788490-mRNA-1:cds;Parent=Msa0788490-mRNA-1
chr5_2 CDS 75188752 75188889 75188752 ID=Msa0788490-mRNA-1:cds;Parent=Msa0788490-mRNA-1
chr5_2 CDS 75189321 75189437 75189321 ID=Msa0788490-mRNA-1:cds;Parent=Msa0788490-mRNA-1
chr5_2 CDS 75190264 75190398 75190264 ID=Msa0788490-mRNA-1:cds;Parent=Msa0788490-mRNA-1
chr5_2 three_prime_UTR 75190399 75190703 75190399 ID=Msa0788490-mRNA-1:three_prime_utr;Parent=Msa0788490-mRNA-1
Gene Sequence

>Msa0788490

ATGGCTCTTCAATGTGGTTCTTTCTGCTTCACAAGTGTGGTTTCTAACCCTCCTGGTTCAGCTAAATTCATCCAACCCATTGTTAAAGCTTCGGTTTTTCCTTCATCTCATTCTCCTCCTAATGTTCGGTTGAATTTTAAAGGAAAGACAAAGGCAATACCTGAAAATGGGAGCCCTGAAACAAAGGAATCGCCTCTGGTGGTTTGTTTCGGAGAAATGCTCATTGATTTTGTCCCAACTGTTAGTGGCCTTTCTTTGGCTGATGCACCGGCATTTAAAAAGGCTCCAGGTGGTGCTCCTGCTAATGTTGCTGTAGGCATATCCCGATTAGGAGGTTCATCGGCTTTTATTGGAAAGGTTGGTGAGGATGAATTCGGATATATGCTTGCAGATATACTCAAGGAAAATAATGTAAACAGCCAAGGGATGCGTTTTGACCCTGGTGCACGTACCGCCTTAGCATTTGTTACCCTAAGGAGTGATGGAGAACGAGAGTTCATGTTTTATCGTAACCCCAGTGCTGATATGCTTCTCCAAGAAGATGAACTAGACTTGGACTTAATCACAAAGGCCAAGATCTTTCATTATGGTTCGATAAGTCTTATAACAGAACCATGCAAATCGGCACACGTAGCTGCAGCAAAGGCTGCAAAAGAAGCTGGTGTATTTCTGTCTTATGACCCTAACCTGAGGCTTCCTTTATGGCCTTCTGCAGATAGTGCTAGAGAAGGAATTCTGAGTATATGGGAGACTGCAGATATCATCAAGATTAGTGAAGAAGAGATTTCTTTTCTTACAAATGGTGAAGACCCATACAATGATGCTGTTGTTCGAAAACTTTTCCATCCAAACCTCAAACTACTCCTTGTTACCGAAGGTGCAGAAGGCTGCAGGTATTACACCAAGGAATTCAGCGGTAGAGTGGCGGGAATGAAGGTGGATGCAGTTGACACCACTGGTGCTGGTGACGCTTTTGTGGCTGGAATACTATCACAATTAGCTACGGATCTTTCATTACTTCAGAAAGAGGAACAATTGAGAGAATCTCTCAAGTTTGCCAATGCTTGTGGTGCATTGACTGTGACTGAGAGAGGTGCAATACCAGCATTGCCCACAAAGGAAACTGTTCTGAATGCCCTGCTTAAACCTGTATCATAA

Protein sequence

>Msa0788490

MALQCGSFCFTSVVSNPPGSAKFIQPIVKASVFPSSHSPPNVRLNFKGKTKAIPENGSPETKESPLVVCFGEMLIDFVPTVSGLSLADAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGEDEFGYMLADILKENNVNSQGMRFDPGARTALAFVTLRSDGEREFMFYRNPSADMLLQEDELDLDLITKAKIFHYGSISLITEPCKSAHVAAAKAAKEAGVFLSYDPNLRLPLWPSADSAREGILSIWETADIIKISEEEISFLTNGEDPYNDAVVRKLFHPNLKLLLVTEGAEGCRYYTKEFSGRVAGMKVDAVDTTGAGDAFVAGILSQLATDLSLLQKEEQLRESLKFANACGALTVTERGAIPALPTKETVLNALLKPVS*