AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1157940

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1157940 MtrunA17_Chr7g0252281 94.405 983 54 1 1 983 1 982 0.0 1910
Msa1157940 MtrunA17_Chr6g0461901 48.331 629 285 12 3 595 1 625 3.89e-167 514
Msa1157940 MtrunA17_Chr2g0327571 25.664 226 142 6 89 297 81 297 8.69e-14 76.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1157940 AT5G13950.3 44.598 435 222 6 3 428 1 425 3.42e-108 358
Msa1157940 AT5G13950.3 27.586 377 209 15 650 982 597 953 6.61e-21 99.8
Msa1157940 AT5G13950.1 44.988 429 214 6 3 428 1 410 6.68e-108 357
Msa1157940 AT5G13950.1 27.586 377 209 15 650 982 582 938 6.14e-21 99.8
Msa1157940 AT5G13950.2 44.988 429 214 6 3 428 1 410 6.68e-108 357
Msa1157940 AT5G13950.2 27.586 377 209 15 650 982 582 938 6.14e-21 99.8
Msa1157940 AT5G13950.4 44.988 429 214 6 3 428 1 410 6.68e-108 357
Msa1157940 AT5G13950.4 27.586 377 209 15 650 982 582 938 6.14e-21 99.8
Msa1157940 AT3G45830.1 33.758 157 96 3 89 240 80 233 4.32e-17 87.4
Msa1157940 AT1G02290.1 33.871 124 78 2 85 205 31 153 1.39e-15 80.9

Find 304 sgRNAs with CRISPR-Local

Find 579 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATAATTAAATAAATATT+TGG 0.143216 7_4:-46966288 None:intergenic
TTGGAAACCCTTTCTTAAAA+TGG 0.183676 7_4:+46968505 Msa1157940:CDS
AGGACTAAACGAAAGAATTT+TGG 0.201867 7_4:+46968039 Msa1157940:CDS
CAAAATTAACTATGTTAATT+AGG 0.209520 7_4:-46973602 None:intergenic
AGCGAGTGTGAAGGGCAATT+TGG 0.214860 7_4:-46966565 None:intergenic
GTGTAGTTTGCCTCCTTTCT+TGG 0.223658 7_4:-46970881 None:intergenic
CTCTTCAGACCAGCAAATTC+AGG 0.228547 7_4:+46973208 Msa1157940:CDS
CAGGGGTGCTTCACTTTGTT+CGG 0.235888 7_4:+46969337 Msa1157940:intron
GTTGTCCAGGAATTACTTTC+TGG 0.238235 7_4:+46968468 Msa1157940:CDS
GCTGAAGCCATCATATTTCT+TGG 0.241352 7_4:-46970829 None:intergenic
TAGTACTCTTAACTGTGTTT+TGG 0.255011 7_4:+46971418 Msa1157940:CDS
CCTTAAAATGACTATAAAAT+TGG 0.257108 7_4:-46972953 None:intergenic
AAGGGTTACCTGAACGTAAT+TGG 0.266046 7_4:-46973331 None:intergenic
CGCTGTTGTGATAAGAATTA+TGG 0.276488 7_4:-46972041 None:intergenic
GCGAGTGTGAAGGGCAATTT+GGG 0.286152 7_4:-46966564 None:intergenic
CTTGTCCCATTGAGGAAATT+TGG 0.294813 7_4:-46970108 None:intergenic
CATGCTCCTCCTCCTGGGCC+TGG 0.296666 7_4:-46971948 None:intergenic
ATGTCAAACCTCAGAATATT+TGG 0.297027 7_4:-46969612 None:intergenic
CCACCCCTTTCATATAGATT+TGG 0.298364 7_4:+46972485 Msa1157940:CDS
AAGAGCTGGGTTAAATTTCC+AGG 0.308776 7_4:+46972902 Msa1157940:CDS
TCTTGGTGTAAATTAGATTC+TGG 0.308815 7_4:-46972744 None:intergenic
TGCCCTTCACACTCGCTCTT+AGG 0.310434 7_4:+46966571 Msa1157940:five_prime_UTR
TTATGGAGGGACGGGTTCTC+TGG 0.322298 7_4:-46972024 None:intergenic
CAAAGAAGAAAGCAATTAAA+TGG 0.322965 7_4:+46967979 Msa1157940:CDS
TGCAGCTAGTGGATCTTGCC+TGG 0.327302 7_4:-46973090 None:intergenic
AATCTCACATTTCTGTTGAA+TGG 0.330598 7_4:+46968091 Msa1157940:CDS
TCAACAGCCATTAGCATATA+AGG 0.331673 7_4:-46967955 None:intergenic
TTATCATTTGGCAGTATGAT+TGG 0.332500 7_4:+46969528 Msa1157940:intron
TCATGGTAAACAATCATATC+TGG 0.336872 7_4:-46969371 None:intergenic
CCTACTTTAAATGATCAAAT+AGG 0.340260 7_4:+46973542 Msa1157940:CDS
AATTCCTGGACAACTTGATT+TGG 0.341371 7_4:-46968459 None:intergenic
CCACCACTTACATATAGATT+TGG 0.345520 7_4:+46972281 Msa1157940:CDS
TCCAGGCACCCTGAATTTGC+TGG 0.348294 7_4:-46973217 None:intergenic
AGCCAATTTGCTCCTGGCTT+TGG 0.349564 7_4:-46972824 None:intergenic
CCACCGCTTGGATATAGATT+TGG 0.350247 7_4:+46972074 Msa1157940:CDS
GGGCAATTTGGGGATTATAA+TGG 0.351503 7_4:-46966553 None:intergenic
GCTTGAAAATTCAGGTTGAT+AGG 0.354916 7_4:+46973779 Msa1157940:three_prime_UTR
CACCACCATGCTCCTCCTCC+TGG 0.359202 7_4:-46971954 None:intergenic
TTCATGCCAGAAAACGTATC+AGG 0.360939 7_4:+46973032 Msa1157940:CDS
ATCTACTACTCCATAGGTTC+TGG 0.362720 7_4:-46973390 None:intergenic
TGACATCCGGGTCATATTCC+TGG 0.366334 7_4:+46970056 Msa1157940:CDS
TTTATATTGTTGAAACAAAC+TGG 0.367453 7_4:+46973939 Msa1157940:three_prime_UTR
TTTCTTAAGCAGTTTCTTCC+TGG 0.369686 7_4:+46968426 Msa1157940:CDS
TGTAGTTTGCCTCCTTTCTT+GGG 0.371010 7_4:-46970880 None:intergenic
TACCAAAGCCAGGAGCAAAT+TGG 0.371663 7_4:+46972822 Msa1157940:CDS
GATGCTTCACATAACAAAAC+TGG 0.378324 7_4:+46972123 Msa1157940:CDS
CCTTGATATATGACATATAT+TGG 0.379166 7_4:-46970933 None:intergenic
CCCGCTTGGCAACAACCCTT+TGG 0.379771 7_4:-46968125 None:intergenic
GCTCAGCTCCACACTTTCCT+AGG 0.380117 7_4:-46966414 None:intergenic
TTATTAACGGAGGAATTCTC+TGG 0.384178 7_4:-46972435 None:intergenic
TATCTCACCTTATATGCTAA+TGG 0.389223 7_4:+46967948 Msa1157940:exon
TAGATTCTGGACCAATCATT+CGG 0.389987 7_4:-46972731 None:intergenic
ATTAATACCGATAATTTCAT+TGG 0.390440 7_4:+46973173 Msa1157940:CDS
ATGTCCATCGTGATCAAATC+TGG 0.393064 7_4:-46968187 None:intergenic
ATGGGTAAGCTTGAAAATTC+AGG 0.396966 7_4:+46973771 Msa1157940:three_prime_UTR
TGCATGTTATGAATCACTTC+GGG 0.399595 7_4:+46973968 Msa1157940:three_prime_UTR
ATGATATAAAGAAAAGAAAA+TGG 0.408606 7_4:+46969984 Msa1157940:CDS
CAACATGATTGTTACCTCAT+AGG 0.410649 7_4:-46968280 None:intergenic
CTGCAAGAAATATTACTGAT+TGG 0.411422 7_4:+46973108 Msa1157940:CDS
TTCCTTTCGCCCAGAACCTA+TGG 0.411584 7_4:+46973380 Msa1157940:CDS
AGAACAAAACCGAGCATTCA+AGG 0.411771 7_4:+46972544 Msa1157940:CDS
TCATTCGGGTTTGTCTATCT+TGG 0.413250 7_4:-46972716 None:intergenic
GCCTGTTGGCAGTGTAGTCA+TGG 0.416847 7_4:-46972668 None:intergenic
TAATTTCTATAGGTTACAAT+TGG 0.427079 7_4:+46971610 Msa1157940:intron
TATCTAGATGTTAGATGTGT+TGG 0.431063 7_4:+46973737 Msa1157940:intron
CGTTTAGTCCTATATTGCTC+TGG 0.433752 7_4:-46968027 None:intergenic
ATCTCACATTTCTGTTGAAT+GGG 0.435644 7_4:+46968092 Msa1157940:CDS
CTTGAAAATTCAGGTTGATA+GGG 0.436970 7_4:+46973780 Msa1157940:three_prime_UTR
GTCATACTTAAATCATAGTA+AGG 0.437696 7_4:-46972645 None:intergenic
AGGAGTCCAGGCCCAGGAGG+AGG 0.438122 7_4:+46971942 Msa1157940:CDS
TGCAAGAAATATTACTGATT+GGG 0.439743 7_4:+46973109 Msa1157940:CDS
CCTATTTGATCATTTAAAGT+AGG 0.442467 7_4:-46973542 None:intergenic
GATAGACAAACCCGAATGAT+TGG 0.444589 7_4:+46972720 Msa1157940:CDS
AGGGGTGCTTCACTTTGTTC+GGG 0.446244 7_4:+46969338 Msa1157940:intron
AGGTTCTGGGCGAAAGGAAC+TGG 0.447274 7_4:-46973376 None:intergenic
ATGGTTCTCCAGAGCAATAT+AGG 0.448577 7_4:+46968019 Msa1157940:CDS
TCCCTGCATCATATGCAAAC+TGG 0.449155 7_4:+46971645 Msa1157940:CDS
ACCAGCAAATTCAGGGTGCC+TGG 0.450331 7_4:+46973216 Msa1157940:CDS
GAACACTAAATAAGTTATGA+TGG 0.450851 7_4:-46973295 None:intergenic
AGATTCTGGACCAATCATTC+GGG 0.451414 7_4:-46972730 None:intergenic
TTGGAATATCGTTTGAAGCC+TGG 0.452698 7_4:-46972920 None:intergenic
CTTGGCGAAGACTTCAATAA+AGG 0.452793 7_4:+46970802 Msa1157940:CDS
GCCATTGCCAGATCCATTCC+AGG 0.452838 7_4:-46973234 None:intergenic
GCAGCTAGTGGATCTTGCCT+GGG 0.453568 7_4:-46973089 None:intergenic
GTGTGTCTGATTGACTCATA+AGG 0.453911 7_4:-46973350 None:intergenic
GAAATTGTAGGCGGTGGTGA+GGG 0.456750 7_4:-46966643 None:intergenic
CAGGGTGCCTGGAATGGATC+TGG 0.457650 7_4:+46973227 Msa1157940:CDS
CTTCATCTTCCAAGCTAGAC+TGG 0.460981 7_4:-46971984 None:intergenic
CATCTCCAGAAAGTAATTCC+TGG 0.461244 7_4:-46968473 None:intergenic
GTAATATTTCTTGCAGCTAG+TGG 0.461801 7_4:-46973101 None:intergenic
TTTGCAAACGTCTCTAACAT+TGG 0.462030 7_4:+46972980 Msa1157940:CDS
GCAATTAAATGGTGCAAGCC+TGG 0.462158 7_4:+46967990 Msa1157940:CDS
CAATATAACCAATTACGTTC+AGG 0.463122 7_4:+46973323 Msa1157940:CDS
AGGCGGTGGTGAGGGGAAAG+TGG 0.464420 7_4:-46966635 None:intergenic
CGAACTTGTTAAGAGTTTGA+AGG 0.465315 7_4:+46971373 Msa1157940:CDS
ACAGTATCATTATACGAGAA+AGG 0.465348 7_4:-46972402 None:intergenic
ATAATTACCGGTGAAATTGT+AGG 0.466975 7_4:-46966655 None:intergenic
GGTGCAAGCCTGGTTAGTTA+TGG 0.469377 7_4:+46968000 Msa1157940:CDS
CATACTTGAGGTCGTGGAAC+CGG 0.472548 7_4:+46973567 Msa1157940:CDS
CAGTATCATTATACGAGAAA+GGG 0.472916 7_4:-46972401 None:intergenic
GTTCATAATCCTTGAATGCT+CGG 0.474142 7_4:-46972553 None:intergenic
GGGAATGTTACAGTGACATC+CGG 0.474724 7_4:+46970043 Msa1157940:CDS
GTACACAATTGAACATTCAA+TGG 0.475973 7_4:+46972341 Msa1157940:CDS
CTCATCAAGGACAACGGGAT+TGG 0.476228 7_4:+46972858 Msa1157940:CDS
CTCATTGCCTTGTCCCATTG+AGG 0.477090 7_4:-46970116 None:intergenic
CTCATCCATGTCATATCATC+AGG 0.478114 7_4:-46973503 None:intergenic
GTCCAGTTTGCATATGATGC+AGG 0.478775 7_4:-46971647 None:intergenic
TCTCCAAATCTATATGTAAG+TGG 0.478786 7_4:-46972284 None:intergenic
CCAAAGGGTTGTTGCCAAGC+GGG 0.480617 7_4:+46968125 Msa1157940:CDS
TCTGGAGATGAATTTCACTT+TGG 0.481121 7_4:+46968486 Msa1157940:CDS
CAAATTCAGGGTGCCTGGAA+TGG 0.481854 7_4:+46973221 Msa1157940:CDS
ACCACCATGCTCCTCCTCCT+GGG 0.485109 7_4:-46971953 None:intergenic
CCCATGACTACACTGCCAAC+AGG 0.485792 7_4:+46972667 Msa1157940:CDS
TGACATCCAAATTTCCTCAA+TGG 0.487454 7_4:+46970102 Msa1157940:CDS
GAAAGATAAATCAAATGTAC+TGG 0.487967 7_4:+46971721 Msa1157940:CDS
ATGTTTAGATCACTTTGCAC+TGG 0.488346 7_4:-46968066 None:intergenic
AGTCCCTCATCAAGGACAAC+GGG 0.488563 7_4:+46972853 Msa1157940:CDS
ATAATTTCATTGGTCAGCCT+TGG 0.490290 7_4:+46973183 Msa1157940:CDS
TGCTTTCTCCTCTTCATCCC+AGG 0.490732 7_4:-46970074 None:intergenic
TGTGTTGGAAAGAGAAAGCA+TGG 0.491663 7_4:+46973752 Msa1157940:three_prime_UTR
TTTAGATCACTTTGCACTGG+TGG 0.491752 7_4:-46968063 None:intergenic
ACAATTACGTAAATATCATA+AGG 0.492095 7_4:+46969430 Msa1157940:CDS
AACAAGTTCGTGCTGCGTCT+TGG 0.492550 7_4:-46971360 None:intergenic
GCTTCAAACGATATTCCAAT+GGG 0.494112 7_4:+46972924 Msa1157940:CDS
TATGGAGGGACGGGTTCTCT+GGG 0.494784 7_4:-46972023 None:intergenic
TAAATCAAATGTACTGGTAG+AGG 0.495032 7_4:+46971727 Msa1157940:CDS
GAAAAGAAAATGGTCAAACT+TGG 0.496665 7_4:+46969994 Msa1157940:CDS
TCGTGATCAAATCTGGCAAA+TGG 0.497519 7_4:-46968180 None:intergenic
CACAGTTAAGAGTACTAGCC+GGG 0.497861 7_4:-46971412 None:intergenic
GAGCACAGGAGTCCAGGCCC+AGG 0.499157 7_4:+46971936 Msa1157940:CDS
GAATCAAGCCAATTTGCTCC+TGG 0.500105 7_4:-46972830 None:intergenic
TCTTCAGACCAGCAAATTCA+GGG 0.500856 7_4:+46973209 Msa1157940:CDS
GACATCCAAATTTCCTCAAT+GGG 0.501103 7_4:+46970103 Msa1157940:CDS
TGGATTTCTAATTAAGCTGA+AGG 0.501554 7_4:+46969548 Msa1157940:CDS
AAGTGAAGTGCTTTCCTATG+AGG 0.502687 7_4:+46968266 Msa1157940:CDS
GGCTGTTAGTGCCCCTCGCA+TGG 0.503567 7_4:+46973130 Msa1157940:CDS
TTCAACGATTATGAAATGTC+AGG 0.503971 7_4:+46972149 Msa1157940:CDS
TGTCGAGAGACGGGTTCTGT+TGG 0.505359 7_4:-46972230 None:intergenic
AGGCTGACCAATGAAATTAT+CGG 0.505474 7_4:-46973180 None:intergenic
CCAATATATGTCATATATCA+AGG 0.507528 7_4:+46970933 Msa1157940:CDS
GACCTGCAAAAGTCCAGAAA+AGG 0.508932 7_4:+46969581 Msa1157940:CDS
TCTACTACTCCATAGGTTCT+GGG 0.512303 7_4:-46973389 None:intergenic
TGATAAGAATTATGGAGGGA+CGG 0.512882 7_4:-46972033 None:intergenic
CTGCATGTTATGAATCACTT+CGG 0.513067 7_4:+46973967 Msa1157940:three_prime_UTR
ATTCAAGGATTATGAACTCT+CGG 0.514090 7_4:+46972559 Msa1157940:CDS
AGAGCCAAATCAAGTTGTCC+AGG 0.514668 7_4:+46968455 Msa1157940:CDS
AAATTGTAGGCGGTGGTGAG+GGG 0.514717 7_4:-46966642 None:intergenic
CCTTCGCGCCAACTTGCTCT+CGG 0.516302 7_4:-46966436 None:intergenic
ACTGGAGCAAGATCCACAAA+AGG 0.517558 7_4:+46973627 Msa1157940:three_prime_UTR
TGATCTAGTGGATGAGAAGA+TGG 0.518345 7_4:-46973446 None:intergenic
GATAAGAATTATGGAGGGAC+GGG 0.519423 7_4:-46972032 None:intergenic
CTCCATAGGTTCTGGGCGAA+AGG 0.522077 7_4:-46973382 None:intergenic
ATCCACAAAAGGGATGAGAT+AGG 0.522500 7_4:+46973638 Msa1157940:three_prime_UTR
CTTCGGTTCTTACCAAAGCC+AGG 0.523206 7_4:+46972812 Msa1157940:CDS
TCATCAGGCACCAGAGCACC+AGG 0.523585 7_4:-46973488 None:intergenic
GGAAAGTGGAAAACGAAGTA+AGG 0.523882 7_4:-46966621 None:intergenic
GTTGCCAAGCGGGAACAGAT+TGG 0.526201 7_4:+46968135 Msa1157940:CDS
AAGTCAGATGATGGTCCCTT+CGG 0.526856 7_4:+46972795 Msa1157940:CDS
TAAAATTGGCCATTCCCCAT+TGG 0.527911 7_4:-46972939 None:intergenic
CTTGATTCAGTCCCTCATCA+AGG 0.528173 7_4:+46972845 Msa1157940:CDS
AGGTGAACCAAGAAATATGA+TGG 0.529602 7_4:+46970822 Msa1157940:CDS
TAGGATCATACTTGAGGTCG+TGG 0.530071 7_4:+46973561 Msa1157940:CDS
TGTTAATAACCAGTCTAGCT+TGG 0.530242 7_4:+46971975 Msa1157940:CDS
TATTAATGAACGGCTTTCAT+CGG 0.531588 7_4:-46967874 None:intergenic
GCACTTCACTTAAACTATCC+AGG 0.531960 7_4:-46968254 None:intergenic
CACTGCCAACAGGCTATCAC+TGG 0.532764 7_4:+46972677 Msa1157940:CDS
AGAAGAACTTGCATGAGCAT+TGG 0.532815 7_4:+46971495 Msa1157940:CDS
GAATCTTCATCGGATGAGAA+AGG 0.533045 7_4:-46972195 None:intergenic
GACATCCGGGTCATATTCCT+GGG 0.533135 7_4:+46970057 Msa1157940:CDS
ACCGGTGAAATTGTAGGCGG+TGG 0.533268 7_4:-46966649 None:intergenic
AAACAATCATATCTGGATGA+AGG 0.534015 7_4:-46969364 None:intergenic
GATAAGAATTGTCGAGAGAC+GGG 0.534554 7_4:-46972239 None:intergenic
TTCAATGGTTATGAACTCTC+AGG 0.535637 7_4:+46972356 Msa1157940:CDS
GCTGTGATAAGATTTATTAA+CGG 0.535743 7_4:-46972448 None:intergenic
ACACCAAGAAAACATTGGTA+AGG 0.539452 7_4:+46972758 Msa1157940:CDS
GGTATTAATGTGAGATTGAG+AGG 0.540132 7_4:-46973159 None:intergenic
GGGAGTTTCCTCCCGTGCCA+AGG 0.541221 7_4:-46973274 None:intergenic
GATCAAGGTCAGAGGCAAGC+TGG 0.541280 7_4:+46973002 Msa1157940:CDS
CGGGATGATTCCATCGGTGA+AGG 0.541376 7_4:+46972579 Msa1157940:CDS
ATGATGTTTGACAGGGTGCT+TGG 0.543416 7_4:+46970784 Msa1157940:intron
TGTGTCTGATTGACTCATAA+GGG 0.543563 7_4:-46973349 None:intergenic
AACCTAAGAGCGAGTGTGAA+GGG 0.543731 7_4:-46966573 None:intergenic
CGATGACGAGCTCCACCGCT+TGG 0.544441 7_4:+46972062 Msa1157940:CDS
GTTGCACATGAAAGTTATCA+AGG 0.547807 7_4:-46971445 None:intergenic
TTCAAGGATTATGAACTCTC+GGG 0.549456 7_4:+46972560 Msa1157940:CDS
CTCAGATGATCCTTCACCGA+TGG 0.549658 7_4:-46972589 None:intergenic
ACCTATGGAGTAGTAGATGC+AGG 0.550339 7_4:+46973395 Msa1157940:CDS
GCCTGGAATGGATCTGGCAA+TGG 0.553538 7_4:+46973233 Msa1157940:CDS
GGTAATATTTATTCTGACAC+AGG 0.554644 7_4:+46973053 Msa1157940:CDS
CTGGCTTTGGTAAGAACCGA+AGG 0.556503 7_4:-46972811 None:intergenic
ACCAAAGGGTTGTTGCCAAG+CGG 0.557753 7_4:+46968124 Msa1157940:CDS
GATGCCAATCTGTTCCCGCT+TGG 0.557815 7_4:-46968139 None:intergenic
CCGAGAGCAAGTTGGCGCGA+AGG 0.558552 7_4:+46966436 Msa1157940:five_prime_UTR
CTCAGCTCCACACTTTCCTA+GGG 0.558840 7_4:-46966413 None:intergenic
TAATTAAGCTGAAGGAGAGG+TGG 0.559139 7_4:+46969556 Msa1157940:CDS
TGAAATTGTAGGCGGTGGTG+AGG 0.560978 7_4:-46966644 None:intergenic
CAGGATGATCCCATCAGTGA+GGG 0.561185 7_4:+46972375 Msa1157940:CDS
GGCTGTTCACTATTAATGAA+CGG 0.561528 7_4:-46967884 None:intergenic
GGCTTCAAACGATATTCCAA+TGG 0.562243 7_4:+46972923 Msa1157940:CDS
AACACTAAATAAGTTATGAT+GGG 0.562434 7_4:-46973294 None:intergenic
AACGATATTCCAATGGGGAA+TGG 0.562666 7_4:+46972930 Msa1157940:CDS
AGTCTATTTAGTCAGAGCCT+TGG 0.562741 7_4:+46973257 Msa1157940:CDS
TCACGATGGACATGAAGTCT+TGG 0.563479 7_4:+46968197 Msa1157940:CDS
GTCATATTCCTGGGATGAAG+AGG 0.563546 7_4:+46970066 Msa1157940:CDS
ATCAAATAGGATCATACTTG+AGG 0.564325 7_4:+46973555 Msa1157940:CDS
TGATAAGAATTGTCGAGAGA+CGG 0.566428 7_4:-46972240 None:intergenic
CAGGATGATCCCATCGGTGA+AGG 0.567090 7_4:+46972168 Msa1157940:CDS
GGGAACAGATTGGCATCAGT+TGG 0.568573 7_4:+46968145 Msa1157940:CDS
CGTCCACTGAAATGATCTAG+TGG 0.572037 7_4:-46973458 None:intergenic
TCATCTAGTTCCGAAAATAA+CGG 0.572091 7_4:+46966461 Msa1157940:five_prime_UTR
ATTTAGTCAGAGCCTTGGCA+CGG 0.572165 7_4:+46973262 Msa1157940:CDS
TATTAACGGAGGAATTCTCT+GGG 0.573045 7_4:-46972434 None:intergenic
TTTAGTCAGAGCCTTGGCAC+GGG 0.573921 7_4:+46973263 Msa1157940:CDS
CAGGCCCAGGAGGAGGAGCA+TGG 0.574159 7_4:+46971949 Msa1157940:CDS
AGGTATCAAATGCTGAAAGC+AGG 0.575297 7_4:+46973877 Msa1157940:three_prime_UTR
TCAGAGATGATGATCATGAT+GGG 0.580024 7_4:+46970023 Msa1157940:CDS
TCTAACAAAAGAATCTTCAT+CGG 0.580598 7_4:-46972205 None:intergenic
ATCTTATCACAGCGATGATG+AGG 0.582360 7_4:+46972458 Msa1157940:CDS
TTCAGAGATGATGATCATGA+TGG 0.582825 7_4:+46970022 Msa1157940:CDS
CTGGAGAACCATAACTAACC+AGG 0.583931 7_4:-46968008 None:intergenic
CAGCTAGTGGATCTTGCCTG+GGG 0.584455 7_4:-46973088 None:intergenic
TTTCCAAATCTATATGAAAG+GGG 0.584653 7_4:-46972488 None:intergenic
TGATTTGGCTCTAAGTCACC+AGG 0.585102 7_4:-46968444 None:intergenic
AAAGGAGCTCCTTCACCGAT+GGG 0.586539 7_4:-46972177 None:intergenic
ACGTCTCTAACATTGGATCA+AGG 0.588129 7_4:+46972987 Msa1157940:CDS
AATCCCGTTGTCCTTGATGA+GGG 0.588768 7_4:-46972856 None:intergenic
TCTTTGATAAATAATTTGAA+CGG 0.588853 7_4:-46971467 None:intergenic
AATTAAGCTGAAGGAGAGGT+GGG 0.589330 7_4:+46969557 Msa1157940:CDS
GAAAGGAGCTCCTTCACCGA+TGG 0.589486 7_4:-46972178 None:intergenic
GGAATGTTACAGTGACATCC+GGG 0.591091 7_4:+46970044 Msa1157940:CDS
AGTCAGAGCCTTGGCACGGG+AGG 0.594185 7_4:+46973266 Msa1157940:CDS
CTGGAGCAAGATCCACAAAA+GGG 0.594278 7_4:+46973628 Msa1157940:three_prime_UTR
CAATCCCGTTGTCCTTGATG+AGG 0.596160 7_4:-46972857 None:intergenic
ACACAGTTAAGAGTACTAGC+CGG 0.596710 7_4:-46971413 None:intergenic
ATGGGATGCTAATCACCAAA+GGG 0.596779 7_4:+46968110 Msa1157940:CDS
TTCAGTGGACGTGATGCACC+TGG 0.598005 7_4:+46973470 Msa1157940:CDS
TCCAGTTTGCATATGATGCA+GGG 0.599519 7_4:-46971646 None:intergenic
ACCACCGCCTACAATTTCAC+CGG 0.601239 7_4:+46966648 Msa1157940:five_prime_UTR
CCAAATCTATATGAAAGGGG+TGG 0.601625 7_4:-46972485 None:intergenic
CAGCTAGCCCTAGGAAAGTG+TGG 0.601646 7_4:+46966406 Msa1157940:five_prime_UTR
AAGGCAATGAGCTTCAAAGA+AGG 0.601771 7_4:+46970128 Msa1157940:CDS
AAATTCTACCAAATATTCTG+AGG 0.602467 7_4:+46969604 Msa1157940:CDS
TTCTAATTAAGCTGAAGGAG+AGG 0.604463 7_4:+46969553 Msa1157940:CDS
GTGGGAGGAAGACCCAAGAA+AGG 0.606490 7_4:+46970868 Msa1157940:CDS
GAGAGGGTGCTACCATGCGA+GGG 0.607286 7_4:-46973142 None:intergenic
TTCATTAATAGTGAACAGCC+TGG 0.607810 7_4:+46967887 Msa1157940:five_prime_UTR
CAGGAAGTTACTTAATCCCC+AGG 0.608178 7_4:+46973072 Msa1157940:CDS
AACTCTCGGGATGATTCCAT+CGG 0.608690 7_4:+46972573 Msa1157940:CDS
CATCCACTAGATCATTTCAG+TGG 0.609335 7_4:+46973455 Msa1157940:CDS
CCAAATCTATATGTAAGTGG+TGG 0.609827 7_4:-46972281 None:intergenic
CCTGTTGGCAGTGTAGTCAT+GGG 0.611449 7_4:-46972667 None:intergenic
AATTTACACCAAGAAAACAT+TGG 0.611861 7_4:+46972753 Msa1157940:CDS
CATCGGTGAAGGATCATCTG+AGG 0.612176 7_4:+46972590 Msa1157940:CDS
ACTTGTGGACAGCTAGCCCT+AGG 0.614122 7_4:+46966397 Msa1157940:five_prime_UTR
CAAATTTCCTCAATGGGACA+AGG 0.614207 7_4:+46970109 Msa1157940:CDS
GATAACATTCATGCTAATGA+CGG 0.615175 7_4:+46970907 Msa1157940:CDS
TTCATCCCAGGAATATGACC+CGG 0.615803 7_4:-46970062 None:intergenic
ACCTGCATCTACTACTCCAT+AGG 0.618677 7_4:-46973396 None:intergenic
TGTTGTGATAAGAATTATGG+AGG 0.618980 7_4:-46972038 None:intergenic
GTTCTCTGGGACGCTAACAA+TGG 0.620420 7_4:-46972010 None:intergenic
GATGAAGAGGAGAAAGCATA+CGG 0.621806 7_4:+46970079 Msa1157940:CDS
TTTATGCTTAATAATGTGGG+AGG 0.622494 7_4:+46970853 Msa1157940:CDS
TCTCAAATTCAAGTGTTGTG+TGG 0.622989 7_4:+46966520 Msa1157940:five_prime_UTR
TAGTAGATGCAGGTACACAT+AGG 0.623213 7_4:+46973405 Msa1157940:CDS
ATCGGTGAAGGATCATCTGA+GGG 0.624551 7_4:+46972591 Msa1157940:CDS
TTACACAGGAAGTCAGATGA+TGG 0.625201 7_4:+46972786 Msa1157940:CDS
CAATTATGAAAGTACACTTG+TGG 0.628963 7_4:+46966382 Msa1157940:five_prime_UTR
GTGATAAGATTTATTAACGG+AGG 0.632896 7_4:-46972445 None:intergenic
GATCATCTGAGGGTCATGCA+TGG 0.633247 7_4:+46972601 Msa1157940:CDS
GAGCTGAGCCGAGAGCAAGT+TGG 0.633973 7_4:+46966428 Msa1157940:five_prime_UTR
TAACCTAAGAGCGAGTGTGA+AGG 0.638015 7_4:-46966574 None:intergenic
GGTATCATCTAAAAGCATCC+CGG 0.638736 7_4:+46971394 Msa1157940:CDS
CCAAATCTATATCCAAGCGG+TGG 0.639597 7_4:-46972074 None:intergenic
AGTATCATTATACGAGAAAG+GGG 0.642248 7_4:-46972400 None:intergenic
TCATACTTAAATCATAGTAA+GGG 0.643572 7_4:-46972644 None:intergenic
ATTTACCAGTGATAGCCTGT+TGG 0.645383 7_4:-46972682 None:intergenic
TTTGCCAGATTTGATCACGA+TGG 0.649072 7_4:+46968183 Msa1157940:CDS
TGGTGCCTGATGATATGACA+TGG 0.651255 7_4:+46973498 Msa1157940:CDS
CAGTCCCTCATCAAGGACAA+CGG 0.651612 7_4:+46972852 Msa1157940:CDS
AATGGGATGCTAATCACCAA+AGG 0.652621 7_4:+46968109 Msa1157940:CDS
TGGCTTTGGTAAGAACCGAA+GGG 0.653359 7_4:-46972810 None:intergenic
GGATGATCCCATCAGTGAGG+GGG 0.656394 7_4:+46972377 Msa1157940:CDS
GGAGGAAGACCCAAGAAAGG+AGG 0.658566 7_4:+46970871 Msa1157940:CDS
GTAAGGAATGAGATTGAGCG+AGG 0.660641 7_4:-46966604 None:intergenic
AGGATGATCCCATCAGTGAG+GGG 0.665172 7_4:+46972376 Msa1157940:CDS
TAACATTGGATCAAGGTCAG+AGG 0.665378 7_4:+46972994 Msa1157940:CDS
GAAAGGAGGCAAACTACACA+AGG 0.668351 7_4:+46970885 Msa1157940:CDS
AAATGTCAGGATGATCCCAT+CGG 0.670910 7_4:+46972162 Msa1157940:CDS
TGCTGGTCTGAAGAGAACCA+AGG 0.672607 7_4:-46973200 None:intergenic
AGAGGGTGCTACCATGCGAG+GGG 0.674689 7_4:-46973141 None:intergenic
GTATTAATGTGAGATTGAGA+GGG 0.675665 7_4:-46973158 None:intergenic
TCAGGATGATCCCATCAGTG+AGG 0.678980 7_4:+46972374 Msa1157940:CDS
GAGACATCTAGATATGTACA+TGG 0.679901 7_4:-46973696 None:intergenic
TTGGTAAGGAGTTGTTACAC+AGG 0.681191 7_4:+46972772 Msa1157940:CDS
CGAGTGTGAAGGGCAATTTG+GGG 0.683926 7_4:-46966563 None:intergenic
GTTGTGATAAGAATTATGGA+GGG 0.700399 7_4:-46972037 None:intergenic
ACATGGTGTTAAGTTGAGCA+TGG 0.703161 7_4:-46973679 None:intergenic
GCCCAGGAGGAGGAGCATGG+TGG 0.703424 7_4:+46971952 Msa1157940:CDS
TTACCAAATCTATATCCAAG+CGG 0.703973 7_4:-46972077 None:intergenic
ATTACCGGTGAAATTGTAGG+CGG 0.740081 7_4:-46966652 None:intergenic
GTGTTGGAAAGAGAAAGCAT+GGG 0.741213 7_4:+46973753 Msa1157940:three_prime_UTR
TCTAGTGGATGAGAAGATGG+TGG 0.755273 7_4:-46973443 None:intergenic
CTCGACAATTCTTATCACAG+CGG 0.757420 7_4:+46972246 Msa1157940:CDS
CTTCAAACGATATTCCAATG+GGG 0.772354 7_4:+46972925 Msa1157940:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACATAAAACAAAAAATATAA+AGG - chr7_4:46968830-46968849 None:intergenic 10.0%
!!! ATATTTTTGATAGATAAAAA+TGG - chr7_4:46970254-46970273 None:intergenic 10.0%
!!! AATGTTTTTATTTCTTATAT+TGG + chr7_4:46970630-46970649 Msa1157940:intron 10.0%
!! GAATTAATATAAATCAAATT+AGG - chr7_4:46971199-46971218 None:intergenic 10.0%
!!! GAAAAAAATATTTTATCAAA+AGG + chr7_4:46972507-46972526 Msa1157940:CDS 10.0%
!!! GATTATTTAATAATTTTCAA+AGG + chr7_4:46973857-46973876 Msa1157940:three_prime_UTR 10.0%
!!! TTATATTGTTTTAATTTTGG+TGG - chr7_4:46966243-46966262 None:intergenic 15.0%
!! ATAGAGAAATAAATAATTAC+CGG - chr7_4:46966670-46966689 None:intergenic 15.0%
!!! TTTTTGAAATATGATAATGT+AGG + chr7_4:46967313-46967332 Msa1157940:intron 15.0%
!! TATATTTATGATGACATATT+TGG - chr7_4:46967518-46967537 None:intergenic 15.0%
!!! ACAAAAACTGTTTATATTTT+TGG - chr7_4:46968328-46968347 None:intergenic 15.0%
!!! TTTTATTGAATATTGAGAAT+AGG - chr7_4:46969101-46969120 None:intergenic 15.0%
!! ATGATATAAAGAAAAGAAAA+TGG + chr7_4:46969984-46970003 Msa1157940:CDS 15.0%
!!! TCAATTTTTTTTTATCTAAG+AGG - chr7_4:46970231-46970250 None:intergenic 15.0%
!!! CAAAAAAAAATACTATTTTG+TGG + chr7_4:46971235-46971254 Msa1157940:intron 15.0%
!! TCTTTGATAAATAATTTGAA+CGG - chr7_4:46971470-46971489 None:intergenic 15.0%
!!! AGAAGATATTTAATTTCTAT+AGG + chr7_4:46971600-46971619 Msa1157940:intron 15.0%
!!! GAGAAAAATATTTTATCAAA+AGG + chr7_4:46972303-46972322 Msa1157940:CDS 15.0%
!!! AAAAATATTTTATCAAAAGG+AGG + chr7_4:46972306-46972325 Msa1157940:CDS 15.0%
!! CAAAATTAACTATGTTAATT+AGG - chr7_4:46973605-46973624 None:intergenic 15.0%
!! AACATACATCCAATAAAAAA+CGG + chr7_4:46966354-46966373 Msa1157940:five_prime_UTR 20.0%
!! TATGGTTAAATTTATCCATT+AGG + chr7_4:46967128-46967147 Msa1157940:intron 20.0%
!! ATGGTTAAATTTATCCATTA+GGG + chr7_4:46967129-46967148 Msa1157940:intron 20.0%
!! AAAAAGTTACTGTAAAAAGT+TGG - chr7_4:46967386-46967405 None:intergenic 20.0%
!! ATAACTAGTGAAGATAAATA+AGG + chr7_4:46967535-46967554 Msa1157940:intron 20.0%
!! ATTGCAAACTTTAATCATTA+TGG + chr7_4:46967569-46967588 Msa1157940:intron 20.0%
!!! TCTTTATATTTTCTTTGCAT+AGG + chr7_4:46968539-46968558 Msa1157940:intron 20.0%
!!! ACAATATTTCAGATTTTAGA+AGG + chr7_4:46968629-46968648 Msa1157940:intron 20.0%
!!! AATCAGTAAATTACTGTTTT+CGG - chr7_4:46968715-46968734 None:intergenic 20.0%
!!! AATTTACTGATTTCAGATTT+TGG + chr7_4:46968723-46968742 Msa1157940:intron 20.0%
!!! ATCAAATGAAATGTTTTACA+AGG + chr7_4:46968756-46968775 Msa1157940:intron 20.0%
!!! TTTGTATTATTAATTTGCTG+AGG - chr7_4:46969225-46969244 None:intergenic 20.0%
!! ACAATTACGTAAATATCATA+AGG + chr7_4:46969430-46969449 Msa1157940:CDS 20.0%
!!! ATATGTTGTCATTTATCATT+TGG + chr7_4:46969516-46969535 Msa1157940:intron 20.0%
!!! TATTCCATAATTTTATGACA+AGG + chr7_4:46969710-46969729 Msa1157940:intron 20.0%
!! ATGATTGAAAGAAATAATCT+GGG + chr7_4:46969787-46969806 Msa1157940:intron 20.0%
!!! GTATTTTATTAGAAAGTGTA+TGG + chr7_4:46970384-46970403 Msa1157940:intron 20.0%
!! TAATTTCTATAGGTTACAAT+TGG + chr7_4:46971610-46971629 Msa1157940:intron 20.0%
!!! GTAAAAGATGTTTTATCAAA+AGG + chr7_4:46972096-46972115 Msa1157940:CDS 20.0%
!!! TTTTCCAAATCTATATGAAA+GGG - chr7_4:46972492-46972511 None:intergenic 20.0%
!!! TTTTTCCAAATCTATATGAA+AGG - chr7_4:46972493-46972512 None:intergenic 20.0%
!! TCATACTTAAATCATAGTAA+GGG - chr7_4:46972647-46972666 None:intergenic 20.0%
!! CCTTAAAATGACTATAAAAT+TGG - chr7_4:46972956-46972975 None:intergenic 20.0%
!!! CCAATTTTATAGTCATTTTA+AGG + chr7_4:46972953-46972972 Msa1157940:CDS 20.0%
!! ATTAATACCGATAATTTCAT+TGG + chr7_4:46973173-46973192 Msa1157940:CDS 20.0%
!! AACACTAAATAAGTTATGAT+GGG - chr7_4:46973297-46973316 None:intergenic 20.0%
!!! AATTAGGTAAAACATTTTAC+CGG - chr7_4:46973589-46973608 None:intergenic 20.0%
!! TTTATATTGTTGAAACAAAC+TGG + chr7_4:46973939-46973958 Msa1157940:three_prime_UTR 20.0%
!! TATAGAAAACCCTTTTCATT+GGG - chr7_4:46966995-46967014 None:intergenic 25.0%
!! AATGAAAAGGGTTTTCTATA+GGG + chr7_4:46966995-46967014 Msa1157940:intron 25.0%
! AAAAAAATCAACATCCCTAA+TGG - chr7_4:46967146-46967165 None:intergenic 25.0%
!!! TTAGGGATGTTGATTTTTTT+TGG + chr7_4:46967146-46967165 Msa1157940:intron 25.0%
!!! TGTTATTTCAATATGACATG+TGG + chr7_4:46967200-46967219 Msa1157940:intron 25.0%
!! GTTATTTCAATATGACATGT+GGG + chr7_4:46967201-46967220 Msa1157940:intron 25.0%
!!! TTACAGTAACTTTTTTCCTT+TGG + chr7_4:46967391-46967410 Msa1157940:intron 25.0%
!!! TTTGATTTGCAGAATAAGTA+TGG + chr7_4:46967489-46967508 Msa1157940:intron 25.0%
! ATAACAATATAGACCATGTT+TGG - chr7_4:46967657-46967676 None:intergenic 25.0%
!! ATATTGTTATTCCTTAACCT+TGG + chr7_4:46967667-46967686 Msa1157940:intron 25.0%
!!! GTTTTGTTGAAACATAGAAT+TGG + chr7_4:46967706-46967725 Msa1157940:intron 25.0%
!! TAATTGAATCTCTTTGCTTT+TGG + chr7_4:46967833-46967852 Msa1157940:intron 25.0%
! CAAAGAAGAAAGCAATTAAA+TGG + chr7_4:46967979-46967998 Msa1157940:CDS 25.0%
! AGACAATTTAGAAATACTCT+TGG - chr7_4:46968351-46968370 None:intergenic 25.0%
!!! CATCTTACCATTTTAAGAAA+GGG - chr7_4:46968515-46968534 None:intergenic 25.0%
!!! ACATCTTACCATTTTAAGAA+AGG - chr7_4:46968516-46968535 None:intergenic 25.0%
!!! TTTTAGAAGGATGAAAACTA+TGG + chr7_4:46968642-46968661 Msa1157940:intron 25.0%
! TTTAGAAGGATGAAAACTAT+GGG + chr7_4:46968643-46968662 Msa1157940:intron 25.0%
! CTTGTAAAATAGGCAAAATT+TGG - chr7_4:46968690-46968709 None:intergenic 25.0%
!! CAAAGAAAACGAGATAATTT+TGG - chr7_4:46968789-46968808 None:intergenic 25.0%
!! CAAAATTATCTCGTTTTCTT+TGG + chr7_4:46968787-46968806 Msa1157940:intron 25.0%
! AGAATGAGTTTACTACATAA+TGG + chr7_4:46968982-46969001 Msa1157940:intron 25.0%
!!! CTACATAATGGTTATTTTCT+TGG + chr7_4:46968994-46969013 Msa1157940:intron 25.0%
! ATTGAATATTGAGAATAGGA+TGG - chr7_4:46969097-46969116 None:intergenic 25.0%
! AAATTGATAGAAACAGTTGA+AGG - chr7_4:46969134-46969153 None:intergenic 25.0%
! GAAAAAAGAACTTAAGTTTG+CGG + chr7_4:46969247-46969266 Msa1157940:intron 25.0%
! AAAAAAGAACTTAAGTTTGC+GGG + chr7_4:46969248-46969267 Msa1157940:intron 25.0%
! AAATTCTACCAAATATTCTG+AGG + chr7_4:46969604-46969623 Msa1157940:CDS 25.0%
!! CAGATTATTTCTTTCAATCA+TGG - chr7_4:46969788-46969807 None:intergenic 25.0%
! CATGATTGAAAGAAATAATC+TGG + chr7_4:46969786-46969805 Msa1157940:intron 25.0%
! TGATTGAAAGAAATAATCTG+GGG + chr7_4:46969788-46969807 Msa1157940:intron 25.0%
! AAACAATACAGACACTAAAT+AGG - chr7_4:46969925-46969944 None:intergenic 25.0%
! GATATTTGGTTGTTATGTTA+TGG + chr7_4:46970203-46970222 Msa1157940:intron 25.0%
! AATGAGTATCTATAACAAGT+AGG + chr7_4:46970287-46970306 Msa1157940:intron 25.0%
! ACACTTTCTAATAAAATACC+AGG - chr7_4:46970383-46970402 None:intergenic 25.0%
! AGAGCTATCTAAGTATTTAA+GGG - chr7_4:46970489-46970508 None:intergenic 25.0%
! TAACATAGTCAGAAGAAATA+AGG - chr7_4:46970543-46970562 None:intergenic 25.0%
!!! ATATTGGTATTTTGATTTGC+TGG + chr7_4:46970646-46970665 Msa1157940:intron 25.0%
! ATAACAAAATGATGTTTGAC+AGG + chr7_4:46970776-46970795 Msa1157940:intron 25.0%
! TAACAAAATGATGTTTGACA+GGG + chr7_4:46970777-46970796 Msa1157940:intron 25.0%
!! AGCTTTTATGCTTAATAATG+TGG + chr7_4:46970849-46970868 Msa1157940:CDS 25.0%
!! GCTTTTATGCTTAATAATGT+GGG + chr7_4:46970850-46970869 Msa1157940:CDS 25.0%
! CCTTGATATATGACATATAT+TGG - chr7_4:46970936-46970955 None:intergenic 25.0%
! CCAATATATGTCATATATCA+AGG + chr7_4:46970933-46970952 Msa1157940:CDS 25.0%
!!! ACAATCATTTTTTGTCACAT+CGG + chr7_4:46971089-46971108 Msa1157940:intron 25.0%
! GAAAGATAAATCAAATGTAC+TGG + chr7_4:46971721-46971740 Msa1157940:CDS 25.0%
!!! TTTTAATGGATCTTCAGAAA+AGG - chr7_4:46971758-46971777 None:intergenic 25.0%
! TTGAATTTGACAAGATACTT+AGG + chr7_4:46971823-46971842 Msa1157940:intron 25.0%
!!! GGTTTTAACAAAAACCTTAA+TGG - chr7_4:46971879-46971898 None:intergenic 25.0%
! GTATGGAAAATTAATGGAAA+AGG - chr7_4:46971900-46971919 None:intergenic 25.0%
!! TTTCCATTAATTTTCCATAC+AGG + chr7_4:46971900-46971919 Msa1157940:intron 25.0%
! TCTAACAAAAGAATCTTCAT+CGG - chr7_4:46972208-46972227 None:intergenic 25.0%
! GCTGTGATAAGATTTATTAA+CGG - chr7_4:46972451-46972470 None:intergenic 25.0%
! TTTCCAAATCTATATGAAAG+GGG - chr7_4:46972491-46972510 None:intergenic 25.0%
! GTCATACTTAAATCATAGTA+AGG - chr7_4:46972648-46972667 None:intergenic 25.0%
! AATTTACACCAAGAAAACAT+TGG + chr7_4:46972753-46972772 Msa1157940:CDS 25.0%
!!! TCTTTTTTGTTCATGATGAT+AGG - chr7_4:46972886-46972905 None:intergenic 25.0%
!! TGCAAGAAATATTACTGATT+GGG + chr7_4:46973109-46973128 Msa1157940:CDS 25.0%
! GAACACTAAATAAGTTATGA+TGG - chr7_4:46973298-46973317 None:intergenic 25.0%
!!! TCATTTAAAGTAGGATTTTG+AGG - chr7_4:46973536-46973555 None:intergenic 25.0%
!! CCTATTTGATCATTTAAAGT+AGG - chr7_4:46973545-46973564 None:intergenic 25.0%
! CCTACTTTAAATGATCAAAT+AGG + chr7_4:46973542-46973561 Msa1157940:CDS 25.0%
!! AACATAGTTAATTTTGTGAC+TGG + chr7_4:46973609-46973628 Msa1157940:three_prime_UTR 25.0%
! ACAAAATATAGCTCAAAAAG+AGG - chr7_4:46973905-46973924 None:intergenic 25.0%
!!! ATTGTCTCTCCGTTTTTTAT+TGG - chr7_4:46966366-46966385 None:intergenic 30.0%
! CAATTATGAAAGTACACTTG+TGG + chr7_4:46966382-46966401 Msa1157940:five_prime_UTR 30.0%
! TCATCTAGTTCCGAAAATAA+CGG + chr7_4:46966461-46966480 Msa1157940:five_prime_UTR 30.0%
ATAATTACCGGTGAAATTGT+AGG - chr7_4:46966658-46966677 None:intergenic 30.0%
TTTCATTATTCCTGTCAATG+CGG + chr7_4:46966719-46966738 Msa1157940:intron 30.0%
! TCCAATGTTTTTCTTCGTAT+TGG + chr7_4:46966758-46966777 Msa1157940:intron 30.0%
! CCAATGTTTTTCTTCGTATT+GGG + chr7_4:46966759-46966778 Msa1157940:intron 30.0%
GTTAAATTAGTATGCGTTGT+CGG + chr7_4:46966805-46966824 Msa1157940:intron 30.0%
ATTTGAATATTTGGACTGCA+TGG + chr7_4:46966945-46966964 Msa1157940:intron 30.0%
! CTATAGAAAACCCTTTTCAT+TGG - chr7_4:46966996-46967015 None:intergenic 30.0%
! CAATGAAAAGGGTTTTCTAT+AGG + chr7_4:46966994-46967013 Msa1157940:intron 30.0%
! ATGAAAAGGGTTTTCTATAG+GGG + chr7_4:46966996-46967015 Msa1157940:intron 30.0%
! GATAGCTTCATGCTTTAAAT+TGG + chr7_4:46967018-46967037 Msa1157940:intron 30.0%
!!! GTTGCATTGCAGTTTTATTA+TGG + chr7_4:46967110-46967129 Msa1157940:intron 30.0%
! AAGTCCAATTTTCTGTAGAA+CGG + chr7_4:46967285-46967304 Msa1157940:intron 30.0%
TATTCCGTTCTACAGAAAAT+TGG - chr7_4:46967292-46967311 None:intergenic 30.0%
AAGTTCAAAATACACACCAA+AGG - chr7_4:46967410-46967429 None:intergenic 30.0%
AACTGCTTAATGGAAAATTG+TGG - chr7_4:46967595-46967614 None:intergenic 30.0%
ACAGAATAAGAACTGCTTAA+TGG - chr7_4:46967605-46967624 None:intergenic 30.0%
TTATTCTGTAGAGGTAAGAA+TGG + chr7_4:46967616-46967635 Msa1157940:intron 30.0%
TAAAAACTTTGCACCAAACA+TGG + chr7_4:46967641-46967660 Msa1157940:intron 30.0%
AGTAAGTTACTTCCTATGAA+AGG - chr7_4:46967743-46967762 None:intergenic 30.0%
!!! GATCTTGTTTTGACATATTG+AGG + chr7_4:46967788-46967807 Msa1157940:intron 30.0%
TATTAATGAACGGCTTTCAT+CGG - chr7_4:46967877-46967896 None:intergenic 30.0%
TATCTCACCTTATATGCTAA+TGG + chr7_4:46967948-46967967 Msa1157940:exon 30.0%
! AGGACTAAACGAAAGAATTT+TGG + chr7_4:46968039-46968058 Msa1157940:CDS 30.0%
AATCTCACATTTCTGTTGAA+TGG + chr7_4:46968091-46968110 Msa1157940:CDS 30.0%
ATCTCACATTTCTGTTGAAT+GGG + chr7_4:46968092-46968111 Msa1157940:CDS 30.0%
! ATTGTCTTTTGTGAAACCTT+TGG + chr7_4:46968364-46968383 Msa1157940:intron 30.0%
TTGGAAACCCTTTCTTAAAA+TGG + chr7_4:46968505-46968524 Msa1157940:CDS 30.0%
AGCTCATGGAAAATATTTAG+TGG - chr7_4:46968583-46968602 None:intergenic 30.0%
!!! AACATTCATTTTAGAGCTCA+TGG - chr7_4:46968597-46968616 None:intergenic 30.0%
!! TGAGCTCTAAAATGAATGTT+AGG + chr7_4:46968597-46968616 Msa1157940:intron 30.0%
!!! GCAAAATTTGGTTTTAGTCT+TGG - chr7_4:46968678-46968697 None:intergenic 30.0%
! GTTTTCGGTTCTTGTAAAAT+AGG - chr7_4:46968700-46968719 None:intergenic 30.0%
!!! TTACTGATTTCAGATTTTGG+AGG + chr7_4:46968726-46968745 Msa1157940:intron 30.0%
CTATACATATTCTCAACTCT+TGG + chr7_4:46968925-46968944 Msa1157940:intron 30.0%
AATTTCTCAATTCTCTTCAG+TGG + chr7_4:46969149-46969168 Msa1157940:intron 30.0%
ATTTCTCAATTCTCTTCAGT+GGG + chr7_4:46969150-46969169 Msa1157940:intron 30.0%
AGATGATATGCCATAACATT+AGG - chr7_4:46969178-46969197 None:intergenic 30.0%
TGCATATTACCATTCATTTG+TGG - chr7_4:46969313-46969332 None:intergenic 30.0%
AATGGTAATATGCATTTGCA+GGG + chr7_4:46969319-46969338 Msa1157940:intron 30.0%
AAACAATCATATCTGGATGA+AGG - chr7_4:46969367-46969386 None:intergenic 30.0%
TCATGGTAAACAATCATATC+TGG - chr7_4:46969374-46969393 None:intergenic 30.0%
!! GATTCAGATCTTGTTTCTTT+TGG + chr7_4:46969482-46969501 Msa1157940:intron 30.0%
TTATCATTTGGCAGTATGAT+TGG + chr7_4:46969528-46969547 Msa1157940:intron 30.0%
TGGATTTCTAATTAAGCTGA+AGG + chr7_4:46969548-46969567 Msa1157940:CDS 30.0%
! TTTGGTAGAATTTCCTTTTC+TGG - chr7_4:46969597-46969616 None:intergenic 30.0%
ATGTCAAACCTCAGAATATT+TGG - chr7_4:46969615-46969634 None:intergenic 30.0%
!! ATATTCTGAGGTTTGACATT+TGG + chr7_4:46969616-46969635 Msa1157940:intron 30.0%
ACGTCCTTGTCATAAAATTA+TGG - chr7_4:46969717-46969736 None:intergenic 30.0%
TACTTACGTACTTACATAGA+TGG + chr7_4:46969758-46969777 Msa1157940:intron 30.0%
GAAAAGAAAATGGTCAAACT+TGG + chr7_4:46969994-46970013 Msa1157940:CDS 30.0%
ATCTATAACAAGTAGGTACA+TGG + chr7_4:46970294-46970313 Msa1157940:intron 30.0%
AATTTAGCATCAAATACCTC+GGG - chr7_4:46970352-46970371 None:intergenic 30.0%
CAATTTAGCATCAAATACCT+CGG - chr7_4:46970353-46970372 None:intergenic 30.0%
ATGCTAAATTGATAGAAACC+TGG + chr7_4:46970362-46970381 Msa1157940:intron 30.0%
CTAAGTATTTAAGGGGAATT+GGG - chr7_4:46970481-46970500 None:intergenic 30.0%
TCTAAGTATTTAAGGGGAAT+TGG - chr7_4:46970482-46970501 None:intergenic 30.0%
GAGCTATCTAAGTATTTAAG+GGG - chr7_4:46970488-46970507 None:intergenic 30.0%
GAGAGCTATCTAAGTATTTA+AGG - chr7_4:46970490-46970509 None:intergenic 30.0%
CTATTAATATGAGAGGATGA+GGG - chr7_4:46970512-46970531 None:intergenic 30.0%
ATGTTGCCTATTAATATGAG+AGG - chr7_4:46970519-46970538 None:intergenic 30.0%
ACTATATATCTTCTACTGGA+TGG + chr7_4:46970670-46970689 Msa1157940:intron 30.0%
TTTATGCTTAATAATGTGGG+AGG + chr7_4:46970853-46970872 Msa1157940:CDS 30.0%
GATAACATTCATGCTAATGA+CGG + chr7_4:46970907-46970926 Msa1157940:CDS 30.0%
ATCTCTGAACAATACTGAAT+TGG + chr7_4:46970974-46970993 Msa1157940:intron 30.0%
TGAACAATACTGAATTGGTA+GGG + chr7_4:46970979-46970998 Msa1157940:intron 30.0%
! TAGTGCTACTAAGTAATTAG+AGG + chr7_4:46971036-46971055 Msa1157940:intron 30.0%
! AGTGCTACTAAGTAATTAGA+GGG + chr7_4:46971037-46971056 Msa1157940:intron 30.0%
TGCTTTCTCATCATAAAAGA+AGG - chr7_4:46971265-46971284 None:intergenic 30.0%
CAGAATTATTAGCATCTCTA+AGG + chr7_4:46971305-46971324 Msa1157940:intron 30.0%
! TAGTACTCTTAACTGTGTTT+TGG + chr7_4:46971418-46971437 Msa1157940:CDS 30.0%
! AGTACTCTTAACTGTGTTTT+GGG + chr7_4:46971419-46971438 Msa1157940:CDS 30.0%
AATAACAATTCGTCAGAAGT+AGG - chr7_4:46971536-46971555 None:intergenic 30.0%
TCTAGTAAGCAAAGCAATAA+TGG - chr7_4:46971583-46971602 None:intergenic 30.0%
! TAAATCAAATGTACTGGTAG+AGG + chr7_4:46971727-46971746 Msa1157940:CDS 30.0%
! TCACTGCTAGGAAATTTTAA+TGG - chr7_4:46971772-46971791 None:intergenic 30.0%
CATCCTGTATGGAAAATTAA+TGG - chr7_4:46971906-46971925 None:intergenic 30.0%
GTTGTGATAAGAATTATGGA+GGG - chr7_4:46972040-46972059 None:intergenic 30.0%
TGTTGTGATAAGAATTATGG+AGG - chr7_4:46972041-46972060 None:intergenic 30.0%
TTACCAAATCTATATCCAAG+CGG - chr7_4:46972080-46972099 None:intergenic 30.0%
TTCAACGATTATGAAATGTC+AGG + chr7_4:46972149-46972168 Msa1157940:CDS 30.0%
TCTCCAAATCTATATGTAAG+TGG - chr7_4:46972287-46972306 None:intergenic 30.0%
GTACACAATTGAACATTCAA+TGG + chr7_4:46972341-46972360 Msa1157940:CDS 30.0%
AGTATCATTATACGAGAAAG+GGG - chr7_4:46972403-46972422 None:intergenic 30.0%
CAGTATCATTATACGAGAAA+GGG - chr7_4:46972404-46972423 None:intergenic 30.0%
ACAGTATCATTATACGAGAA+AGG - chr7_4:46972405-46972424 None:intergenic 30.0%
GTGATAAGATTTATTAACGG+AGG - chr7_4:46972448-46972467 None:intergenic 30.0%
ATTCAAGGATTATGAACTCT+CGG + chr7_4:46972559-46972578 Msa1157940:CDS 30.0%
! TCTTGGTGTAAATTAGATTC+TGG - chr7_4:46972747-46972766 None:intergenic 30.0%
ATCATGAACAAAAAAGAGCT+GGG + chr7_4:46972889-46972908 Msa1157940:CDS 30.0%
! ATATTACCTGATACGTTTTC+TGG - chr7_4:46973041-46973060 None:intergenic 30.0%
GGTAATATTTATTCTGACAC+AGG + chr7_4:46973053-46973072 Msa1157940:CDS 30.0%
CTGCAAGAAATATTACTGAT+TGG + chr7_4:46973108-46973127 Msa1157940:CDS 30.0%
GTATTAATGTGAGATTGAGA+GGG - chr7_4:46973161-46973180 None:intergenic 30.0%
CAATATAACCAATTACGTTC+AGG + chr7_4:46973323-46973342 Msa1157940:CDS 30.0%
!! TTTAAAGTAGGATTTTGAGG+AGG - chr7_4:46973533-46973552 None:intergenic 30.0%
ATCAAATAGGATCATACTTG+AGG + chr7_4:46973555-46973574 Msa1157940:CDS 30.0%
CTAACATCTAGATATGTACA+TGG - chr7_4:46973731-46973750 None:intergenic 30.0%
TATCTAGATGTTAGATGTGT+TGG + chr7_4:46973737-46973756 Msa1157940:intron 30.0%
!! CTTGAAAATTCAGGTTGATA+GGG + chr7_4:46973780-46973799 Msa1157940:three_prime_UTR 30.0%
! TCTCAAATTCAAGTGTTGTG+TGG + chr7_4:46966520-46966539 Msa1157940:five_prime_UTR 35.0%
CCCAATACGAAGAAAAACAT+TGG - chr7_4:46966762-46966781 None:intergenic 35.0%
! TTTTTCTTCGTATTGGGAGT+GGG + chr7_4:46966765-46966784 Msa1157940:intron 35.0%
TTGGAAGAGATGAAATAGTG+TGG + chr7_4:46966897-46966916 Msa1157940:intron 35.0%
TGGAAGAGATGAAATAGTGT+GGG + chr7_4:46966898-46966917 Msa1157940:intron 35.0%
AGAACAAACTCCCAATGAAA+AGG + chr7_4:46966982-46967001 Msa1157940:intron 35.0%
GAACAAACTCCCAATGAAAA+GGG + chr7_4:46966983-46967002 Msa1157940:intron 35.0%
CTGGAGCATAAATTCAACAA+TGG - chr7_4:46967065-46967084 None:intergenic 35.0%
TCACTAAAAACACAGAATGC+TGG - chr7_4:46967084-46967103 None:intergenic 35.0%
GTTCTACAGAAAATTGGACT+TGG - chr7_4:46967286-46967305 None:intergenic 35.0%
GATAATGTAGGTGACCTAAT+AGG + chr7_4:46967325-46967344 Msa1157940:intron 35.0%
TTCAACTATAGTCGCCTATT+AGG - chr7_4:46967342-46967361 None:intergenic 35.0%
AAGCAGTTCTTATTCTGTAG+AGG + chr7_4:46967607-46967626 Msa1157940:intron 35.0%
GCTTAGTTGAATCCTTTCAT+AGG + chr7_4:46967728-46967747 Msa1157940:intron 35.0%
!!! TGTTTTGACATATTGAGGCA+TGG + chr7_4:46967793-46967812 Msa1157940:intron 35.0%
GGCTGTTCACTATTAATGAA+CGG - chr7_4:46967887-46967906 None:intergenic 35.0%
TTCATTAATAGTGAACAGCC+TGG + chr7_4:46967887-46967906 Msa1157940:five_prime_UTR 35.0%
CAAGTATGAAGAAAAACACC+AGG - chr7_4:46967908-46967927 None:intergenic 35.0%
TCAACAGCCATTAGCATATA+AGG - chr7_4:46967958-46967977 None:intergenic 35.0%
ATGTTTAGATCACTTTGCAC+TGG - chr7_4:46968069-46968088 None:intergenic 35.0%
CAACATGATTGTTACCTCAT+AGG - chr7_4:46968283-46968302 None:intergenic 35.0%
TTTCTTAAGCAGTTTCTTCC+TGG + chr7_4:46968426-46968445 Msa1157940:CDS 35.0%
AATTCCTGGACAACTTGATT+TGG - chr7_4:46968462-46968481 None:intergenic 35.0%
TCTGGAGATGAATTTCACTT+TGG + chr7_4:46968486-46968505 Msa1157940:CDS 35.0%
!! CAATGAATTAACTCTAGAGC+TGG - chr7_4:46968903-46968922 None:intergenic 35.0%
!!! TACAGAACCACTGTCATTTT+AGG - chr7_4:46969025-46969044 None:intergenic 35.0%
CTTACCCAAATGCAATACTT+TGG + chr7_4:46969053-46969072 Msa1157940:intron 35.0%
!! CAGACCAAAGTATTGCATTT+GGG - chr7_4:46969060-46969079 None:intergenic 35.0%
!! ACTTTAGAGCCACAAATGAA+TGG + chr7_4:46969301-46969320 Msa1157940:intron 35.0%
GAATGGTAATATGCATTTGC+AGG + chr7_4:46969318-46969337 Msa1157940:intron 35.0%
ATGGTAATATGCATTTGCAG+GGG + chr7_4:46969320-46969339 Msa1157940:intron 35.0%
! CAGCTTTTAGATGTTTCTCA+TGG - chr7_4:46969391-46969410 None:intergenic 35.0%
AGAAACAAGATCTGAATCCA+CGG - chr7_4:46969480-46969499 None:intergenic 35.0%
!! AGATCTTGTTTCTTTTGGCA+TGG + chr7_4:46969487-46969506 Msa1157940:intron 35.0%
TTCTAATTAAGCTGAAGGAG+AGG + chr7_4:46969553-46969572 Msa1157940:CDS 35.0%
!! CAGAAGTATTGAGTAATGAC+AGG + chr7_4:46969685-46969704 Msa1157940:intron 35.0%
!! ACGTAAGTATTGAAAGCACA+GGG - chr7_4:46969747-46969766 None:intergenic 35.0%
!! TACGTAAGTATTGAAAGCAC+AGG - chr7_4:46969748-46969767 None:intergenic 35.0%
! TCAAATCTGAGATGAATCTG+AGG + chr7_4:46969822-46969841 Msa1157940:intron 35.0%
TAGCTAGACAAAAACTAGAG+TGG - chr7_4:46969860-46969879 None:intergenic 35.0%
TTCAGAGATGATGATCATGA+TGG + chr7_4:46970022-46970041 Msa1157940:CDS 35.0%
TCAGAGATGATGATCATGAT+GGG + chr7_4:46970023-46970042 Msa1157940:CDS 35.0%
TGACATCCAAATTTCCTCAA+TGG + chr7_4:46970102-46970121 Msa1157940:CDS 35.0%
GACATCCAAATTTCCTCAAT+GGG + chr7_4:46970103-46970122 Msa1157940:CDS 35.0%
TGAAGGTTGCTTCAGATATT+TGG + chr7_4:46970189-46970208 Msa1157940:intron 35.0%
ACATGGCATATGTTGTATCA+AGG + chr7_4:46970311-46970330 Msa1157940:intron 35.0%
!!! CGTGTATTCTGTTTTAGTAC+TGG - chr7_4:46970419-46970438 None:intergenic 35.0%
! AGAATACACGCAGTAGTTTT+GGG + chr7_4:46970429-46970448 Msa1157940:intron 35.0%
CCTATTAATATGAGAGGATG+AGG - chr7_4:46970513-46970532 None:intergenic 35.0%
CCTCATCCTCTCATATTAAT+AGG + chr7_4:46970510-46970529 Msa1157940:intron 35.0%
CTCAACTAACCTAACAAACT+AGG + chr7_4:46970564-46970583 Msa1157940:intron 35.0%
TGGCACTATATATCTTCTAC+TGG + chr7_4:46970666-46970685 Msa1157940:intron 35.0%
AGGTGAACCAAGAAATATGA+TGG + chr7_4:46970822-46970841 Msa1157940:CDS 35.0%
TATTGTTCAGAGATTCGAGA+GGG - chr7_4:46970968-46970987 None:intergenic 35.0%
CTGAACAATACTGAATTGGT+AGG + chr7_4:46970978-46970997 Msa1157940:intron 35.0%
GAACAATACTGAATTGGTAG+GGG + chr7_4:46970980-46970999 Msa1157940:intron 35.0%
! GTCTTGGTAATCTGAAACAT+GGG - chr7_4:46971347-46971366 None:intergenic 35.0%
!! CGAACTTGTTAAGAGTTTGA+AGG + chr7_4:46971373-46971392 Msa1157940:CDS 35.0%
GTTGCACATGAAAGTTATCA+AGG - chr7_4:46971448-46971467 None:intergenic 35.0%
!! AGCATTGGTTAGTAATGTTG+AGG + chr7_4:46971510-46971529 Msa1157940:intron 35.0%
! TCTGACGAATTGTTATTGCA+TGG + chr7_4:46971539-46971558 Msa1157940:intron 35.0%
TAGCATAATAGTGGCCATTA+AGG + chr7_4:46971862-46971881 Msa1157940:intron 35.0%
CAAAACATCATCATCCTGTA+TGG - chr7_4:46971917-46971936 None:intergenic 35.0%
TGTTAATAACCAGTCTAGCT+TGG + chr7_4:46971975-46971994 Msa1157940:CDS 35.0%
TGATAAGAATTATGGAGGGA+CGG - chr7_4:46972036-46972055 None:intergenic 35.0%
CGCTGTTGTGATAAGAATTA+TGG - chr7_4:46972044-46972063 None:intergenic 35.0%
GATGCTTCACATAACAAAAC+TGG + chr7_4:46972123-46972142 Msa1157940:CDS 35.0%
TGATAAGAATTGTCGAGAGA+CGG - chr7_4:46972243-46972262 None:intergenic 35.0%
CCAAATCTATATGTAAGTGG+TGG - chr7_4:46972284-46972303 None:intergenic 35.0%
CCACCACTTACATATAGATT+TGG + chr7_4:46972281-46972300 Msa1157940:CDS 35.0%
TTCAATGGTTATGAACTCTC+AGG + chr7_4:46972356-46972375 Msa1157940:CDS 35.0%
TATTAACGGAGGAATTCTCT+GGG - chr7_4:46972437-46972456 None:intergenic 35.0%
TTATTAACGGAGGAATTCTC+TGG - chr7_4:46972438-46972457 None:intergenic 35.0%
GTTCATAATCCTTGAATGCT+CGG - chr7_4:46972556-46972575 None:intergenic 35.0%
TTCAAGGATTATGAACTCTC+GGG + chr7_4:46972560-46972579 Msa1157940:CDS 35.0%
TAGATTCTGGACCAATCATT+CGG - chr7_4:46972734-46972753 None:intergenic 35.0%
ACACCAAGAAAACATTGGTA+AGG + chr7_4:46972758-46972777 Msa1157940:CDS 35.0%
! ACTCCTTACCAATGTTTTCT+TGG - chr7_4:46972764-46972783 None:intergenic 35.0%
CATCATGAACAAAAAAGAGC+TGG + chr7_4:46972888-46972907 Msa1157940:CDS 35.0%
GCTTCAAACGATATTCCAAT+GGG + chr7_4:46972924-46972943 Msa1157940:CDS 35.0%
CTTCAAACGATATTCCAATG+GGG + chr7_4:46972925-46972944 Msa1157940:CDS 35.0%
TTTGCAAACGTCTCTAACAT+TGG + chr7_4:46972980-46972999 Msa1157940:CDS 35.0%
GTAATATTTCTTGCAGCTAG+TGG - chr7_4:46973104-46973123 None:intergenic 35.0%
GGTATTAATGTGAGATTGAG+AGG - chr7_4:46973162-46973181 None:intergenic 35.0%
AGGCTGACCAATGAAATTAT+CGG - chr7_4:46973183-46973202 None:intergenic 35.0%
ATAATTTCATTGGTCAGCCT+TGG + chr7_4:46973183-46973202 Msa1157940:CDS 35.0%
! TGTGTCTGATTGACTCATAA+GGG - chr7_4:46973352-46973371 None:intergenic 35.0%
GAGACATCTAGATATGTACA+TGG - chr7_4:46973699-46973718 None:intergenic 35.0%
ATGGGTAAGCTTGAAAATTC+AGG + chr7_4:46973771-46973790 Msa1157940:three_prime_UTR 35.0%
!! GCTTGAAAATTCAGGTTGAT+AGG + chr7_4:46973779-46973798 Msa1157940:three_prime_UTR 35.0%
!! GCTCTCTCAACCGTTATTTT+CGG - chr7_4:46966474-46966493 None:intergenic 40.0%
GGGCAATTTGGGGATTATAA+TGG - chr7_4:46966556-46966575 None:intergenic 40.0%
GGAAAGTGGAAAACGAAGTA+AGG - chr7_4:46966624-46966643 None:intergenic 40.0%
ATTACCGGTGAAATTGTAGG+CGG - chr7_4:46966655-46966674 None:intergenic 40.0%
! GTTTTTCTTCGTATTGGGAG+TGG + chr7_4:46966764-46966783 Msa1157940:intron 40.0%
ATGAAATAGTGTGGGTCGTA+TGG + chr7_4:46966906-46966925 Msa1157940:intron 40.0%
! ATATGACATGTGGGTATTGC+AGG + chr7_4:46967210-46967229 Msa1157940:intron 40.0%
TGAATGCTGAGTTCCAAGTT+CGG + chr7_4:46967432-46967451 Msa1157940:intron 40.0%
TTCCTTAACCTTGGCTTCTA+TGG + chr7_4:46967676-46967695 Msa1157940:intron 40.0%
!!! CTTTGCTTTTGGTGCTTGTT+AGG + chr7_4:46967844-46967863 Msa1157940:intron 40.0%
ATGGTTCTCCAGAGCAATAT+AGG + chr7_4:46968019-46968038 Msa1157940:CDS 40.0%
CGTTTAGTCCTATATTGCTC+TGG - chr7_4:46968030-46968049 None:intergenic 40.0%
TTTAGATCACTTTGCACTGG+TGG - chr7_4:46968066-46968085 None:intergenic 40.0%
AATGGGATGCTAATCACCAA+AGG + chr7_4:46968109-46968128 Msa1157940:CDS 40.0%
ATGGGATGCTAATCACCAAA+GGG + chr7_4:46968110-46968129 Msa1157940:CDS 40.0%
TCGTGATCAAATCTGGCAAA+TGG - chr7_4:46968183-46968202 None:intergenic 40.0%
TTTGCCAGATTTGATCACGA+TGG + chr7_4:46968183-46968202 Msa1157940:CDS 40.0%
ATGTCCATCGTGATCAAATC+TGG - chr7_4:46968190-46968209 None:intergenic 40.0%
! GCCATGCCTGAAGAAATTTT+TGG + chr7_4:46968231-46968250 Msa1157940:CDS 40.0%
GCCAAAAATTTCTTCAGGCA+TGG - chr7_4:46968235-46968254 None:intergenic 40.0%
TCCAGGCCAAAAATTTCTTC+AGG - chr7_4:46968240-46968259 None:intergenic 40.0%
GCACTTCACTTAAACTATCC+AGG - chr7_4:46968257-46968276 None:intergenic 40.0%
! AAGTGAAGTGCTTTCCTATG+AGG + chr7_4:46968266-46968285 Msa1157940:CDS 40.0%
! TCTTTTGTGAAACCTTTGGC+AGG + chr7_4:46968368-46968387 Msa1157940:intron 40.0%
GTTGTCCAGGAATTACTTTC+TGG + chr7_4:46968468-46968487 Msa1157940:CDS 40.0%
CATCTCCAGAAAGTAATTCC+TGG - chr7_4:46968476-46968495 None:intergenic 40.0%
ATCAACAATGCTGTTACACG+TGG + chr7_4:46968875-46968894 Msa1157940:intron 40.0%
TCAACTCTTGGTATCCAACT+TGG + chr7_4:46968937-46968956 Msa1157940:intron 40.0%
!! CCAGACCAAAGTATTGCATT+TGG - chr7_4:46969061-46969080 None:intergenic 40.0%
CCAAATGCAATACTTTGGTC+TGG + chr7_4:46969058-46969077 Msa1157940:intron 40.0%
! TCAGTGGGTTCCTAATGTTA+TGG + chr7_4:46969165-46969184 Msa1157940:intron 40.0%
!! CATGCACAGTTATTTTACCG+TGG + chr7_4:46969460-46969479 Msa1157940:intron 40.0%
TAATTAAGCTGAAGGAGAGG+TGG + chr7_4:46969556-46969575 Msa1157940:CDS 40.0%
AATTAAGCTGAAGGAGAGGT+GGG + chr7_4:46969557-46969576 Msa1157940:CDS 40.0%
! TTCCTTTTCTGGACTTTTGC+AGG - chr7_4:46969586-46969605 None:intergenic 40.0%
TACTTCTGTTCGAAAGAGTG+TGG - chr7_4:46969673-46969692 None:intergenic 40.0%
! TGCCTACGTTGGTAGATAAA+AGG + chr7_4:46969881-46969900 Msa1157940:intron 40.0%
! GCCTACGTTGGTAGATAAAA+GGG + chr7_4:46969882-46969901 Msa1157940:intron 40.0%
! ACCCTTTTATCTACCAACGT+AGG - chr7_4:46969886-46969905 None:intergenic 40.0%
! ACAAGCTTTTTGCTTTGTGC+AGG + chr7_4:46969954-46969973 Msa1157940:intron 40.0%
! GATGAAGAGGAGAAAGCATA+CGG + chr7_4:46970079-46970098 Msa1157940:CDS 40.0%
CTTGTCCCATTGAGGAAATT+TGG - chr7_4:46970111-46970130 None:intergenic 40.0%
CAAATTTCCTCAATGGGACA+AGG + chr7_4:46970109-46970128 Msa1157940:CDS 40.0%
AAGGCAATGAGCTTCAAAGA+AGG + chr7_4:46970128-46970147 Msa1157940:CDS 40.0%
TGGCATATGTTGTATCAAGG+AGG + chr7_4:46970314-46970333 Msa1157940:intron 40.0%
GAGGAAGTAATTAATTCCCG+AGG + chr7_4:46970333-46970352 Msa1157940:intron 40.0%
! CAGAATACACGCAGTAGTTT+TGG + chr7_4:46970428-46970447 Msa1157940:intron 40.0%
!! GAATACACGCAGTAGTTTTG+GGG + chr7_4:46970430-46970449 Msa1157940:intron 40.0%
!!! AATACACGCAGTAGTTTTGG+GGG + chr7_4:46970431-46970450 Msa1157940:intron 40.0%
TTAAGGGGAATTGGGTCTTT+GGG - chr7_4:46970473-46970492 None:intergenic 40.0%
TTTAAGGGGAATTGGGTCTT+TGG - chr7_4:46970474-46970493 None:intergenic 40.0%
!! AGGTAGTTGCCTAGTTTGTT+AGG - chr7_4:46970576-46970595 None:intergenic 40.0%
CTTGGCGAAGACTTCAATAA+AGG + chr7_4:46970802-46970821 Msa1157940:CDS 40.0%
GCTGAAGCCATCATATTTCT+TGG - chr7_4:46970832-46970851 None:intergenic 40.0%
! TGTAGTTTGCCTCCTTTCTT+GGG - chr7_4:46970883-46970902 None:intergenic 40.0%
GTATTGTTCAGAGATTCGAG+AGG - chr7_4:46970969-46970988 None:intergenic 40.0%
! CGTCTTGGTAATCTGAAACA+TGG - chr7_4:46971348-46971367 None:intergenic 40.0%
!! GGTATCATCTAAAAGCATCC+CGG + chr7_4:46971394-46971413 Msa1157940:CDS 40.0%
!! ACACAGTTAAGAGTACTAGC+CGG - chr7_4:46971416-46971435 None:intergenic 40.0%
AGAAGAACTTGCATGAGCAT+TGG + chr7_4:46971495-46971514 Msa1157940:CDS 40.0%
TCCAGTTTGCATATGATGCA+GGG - chr7_4:46971649-46971668 None:intergenic 40.0%
CTATTATGCTACATGAGGCA+AGG - chr7_4:46971853-46971872 None:intergenic 40.0%
TGCCTCATGTAGCATAATAG+TGG + chr7_4:46971853-46971872 Msa1157940:intron 40.0%
!! GATGATGATGTTTTGAGCAC+AGG + chr7_4:46971922-46971941 Msa1157940:CDS 40.0%
GATAAGAATTATGGAGGGAC+GGG - chr7_4:46972035-46972054 None:intergenic 40.0%
AAATGTCAGGATGATCCCAT+CGG + chr7_4:46972162-46972181 Msa1157940:CDS 40.0%
GAATCTTCATCGGATGAGAA+AGG - chr7_4:46972198-46972217 None:intergenic 40.0%
GATAAGAATTGTCGAGAGAC+GGG - chr7_4:46972242-46972261 None:intergenic 40.0%
CTCGACAATTCTTATCACAG+CGG + chr7_4:46972246-46972265 Msa1157940:CDS 40.0%
ATCTTATCACAGCGATGATG+AGG + chr7_4:46972458-46972477 Msa1157940:CDS 40.0%
CCAAATCTATATGAAAGGGG+TGG - chr7_4:46972488-46972507 None:intergenic 40.0%
CCACCCCTTTCATATAGATT+TGG + chr7_4:46972485-46972504 Msa1157940:CDS 40.0%
AGAACAAAACCGAGCATTCA+AGG + chr7_4:46972544-46972563 Msa1157940:CDS 40.0%
ATTTACCAGTGATAGCCTGT+TGG - chr7_4:46972685-46972704 None:intergenic 40.0%
! TCATTCGGGTTTGTCTATCT+TGG - chr7_4:46972719-46972738 None:intergenic 40.0%
GATAGACAAACCCGAATGAT+TGG + chr7_4:46972720-46972739 Msa1157940:CDS 40.0%
AGATTCTGGACCAATCATTC+GGG - chr7_4:46972733-46972752 None:intergenic 40.0%
TTGGTAAGGAGTTGTTACAC+AGG + chr7_4:46972772-46972791 Msa1157940:CDS 40.0%
TTACACAGGAAGTCAGATGA+TGG + chr7_4:46972786-46972805 Msa1157940:CDS 40.0%
AAGAGCTGGGTTAAATTTCC+AGG + chr7_4:46972902-46972921 Msa1157940:CDS 40.0%
! TTGGAATATCGTTTGAAGCC+TGG - chr7_4:46972923-46972942 None:intergenic 40.0%
GGCTTCAAACGATATTCCAA+TGG + chr7_4:46972923-46972942 Msa1157940:CDS 40.0%
AACGATATTCCAATGGGGAA+TGG + chr7_4:46972930-46972949 Msa1157940:CDS 40.0%
TAAAATTGGCCATTCCCCAT+TGG - chr7_4:46972942-46972961 None:intergenic 40.0%
ACGTCTCTAACATTGGATCA+AGG + chr7_4:46972987-46973006 Msa1157940:CDS 40.0%
TAACATTGGATCAAGGTCAG+AGG + chr7_4:46972994-46973013 Msa1157940:CDS 40.0%
TTCATGCCAGAAAACGTATC+AGG + chr7_4:46973032-46973051 Msa1157940:CDS 40.0%
TCTTCAGACCAGCAAATTCA+GGG + chr7_4:46973209-46973228 Msa1157940:CDS 40.0%
AGTCTATTTAGTCAGAGCCT+TGG + chr7_4:46973257-46973276 Msa1157940:CDS 40.0%
AAGGGTTACCTGAACGTAAT+TGG - chr7_4:46973334-46973353 None:intergenic 40.0%
! GTGTGTCTGATTGACTCATA+AGG - chr7_4:46973353-46973372 None:intergenic 40.0%
TCTACTACTCCATAGGTTCT+GGG - chr7_4:46973392-46973411 None:intergenic 40.0%
ATCTACTACTCCATAGGTTC+TGG - chr7_4:46973393-46973412 None:intergenic 40.0%
TAGTAGATGCAGGTACACAT+AGG + chr7_4:46973405-46973424 Msa1157940:CDS 40.0%
! TGATCTAGTGGATGAGAAGA+TGG - chr7_4:46973449-46973468 None:intergenic 40.0%
CATCCACTAGATCATTTCAG+TGG + chr7_4:46973455-46973474 Msa1157940:CDS 40.0%
CTCATCCATGTCATATCATC+AGG - chr7_4:46973506-46973525 None:intergenic 40.0%
ATCCACAAAAGGGATGAGAT+AGG + chr7_4:46973638-46973657 Msa1157940:three_prime_UTR 40.0%
! AACCTATCTCATCCCTTTTG+TGG - chr7_4:46973643-46973662 None:intergenic 40.0%
!! ACATGGTGTTAAGTTGAGCA+TGG - chr7_4:46973682-46973701 None:intergenic 40.0%
TGTGTTGGAAAGAGAAAGCA+TGG + chr7_4:46973752-46973771 Msa1157940:three_prime_UTR 40.0%
! GTGTTGGAAAGAGAAAGCAT+GGG + chr7_4:46973753-46973772 Msa1157940:three_prime_UTR 40.0%
AGGTATCAAATGCTGAAAGC+AGG + chr7_4:46973877-46973896 Msa1157940:three_prime_UTR 40.0%
AGAGAGAGAGAGTGAGTATG+TGG - chr7_4:46966501-46966520 None:intergenic 45.0%
AACCTAAGAGCGAGTGTGAA+GGG - chr7_4:46966576-46966595 None:intergenic 45.0%
TAACCTAAGAGCGAGTGTGA+AGG - chr7_4:46966577-46966596 None:intergenic 45.0%
GTAAGGAATGAGATTGAGCG+AGG - chr7_4:46966607-46966626 None:intergenic 45.0%
! ACAAAACTCACCGCATTGAC+AGG - chr7_4:46966732-46966751 None:intergenic 45.0%
AAATAGTGTGGGTCGTATGG+CGG + chr7_4:46966909-46966928 Msa1157940:intron 45.0%
CACCATAGAAGCCAAGGTTA+AGG - chr7_4:46967681-46967700 None:intergenic 45.0%
CCAATTCACCATAGAAGCCA+AGG - chr7_4:46967687-46967706 None:intergenic 45.0%
CCTTGGCTTCTATGGTGAAT+TGG + chr7_4:46967684-46967703 Msa1157940:intron 45.0%
GCAATTAAATGGTGCAAGCC+TGG + chr7_4:46967990-46968009 Msa1157940:CDS 45.0%
CTGGAGAACCATAACTAACC+AGG - chr7_4:46968011-46968030 None:intergenic 45.0%
TCACGATGGACATGAAGTCT+TGG + chr7_4:46968197-46968216 Msa1157940:CDS 45.0%
!!! GCCTGAAGAAATTTTTGGCC+TGG + chr7_4:46968236-46968255 Msa1157940:CDS 45.0%
TGTGAAACCTTTGGCAGGTT+TGG + chr7_4:46968373-46968392 Msa1157940:intron 45.0%
GTGTATTCCAAACCTGCCAA+AGG - chr7_4:46968383-46968402 None:intergenic 45.0%
!! TGATTTGGCTCTAAGTCACC+AGG - chr7_4:46968447-46968466 None:intergenic 45.0%
! AGAGCCAAATCAAGTTGTCC+AGG + chr7_4:46968455-46968474 Msa1157940:CDS 45.0%
AGTGGAGTCACATGCTAACA+AGG - chr7_4:46968565-46968584 None:intergenic 45.0%
CAATGTGAGTCTAGCCAAGT+TGG - chr7_4:46968954-46968973 None:intergenic 45.0%
GGACATGCCTAAAATGACAG+TGG + chr7_4:46969015-46969034 Msa1157940:intron 45.0%
GACCTGCAAAAGTCCAGAAA+AGG + chr7_4:46969581-46969600 Msa1157940:CDS 45.0%
TGTCTAGCTAATGCCTACGT+TGG + chr7_4:46969870-46969889 Msa1157940:intron 45.0%
GGGAATGTTACAGTGACATC+CGG + chr7_4:46970043-46970062 Msa1157940:CDS 45.0%
GGAATGTTACAGTGACATCC+GGG + chr7_4:46970044-46970063 Msa1157940:CDS 45.0%
TTCATCCCAGGAATATGACC+CGG - chr7_4:46970065-46970084 None:intergenic 45.0%
GTCATATTCCTGGGATGAAG+AGG + chr7_4:46970066-46970085 Msa1157940:CDS 45.0%
AACATTCTGCGTCAGAAGTG+AGG - chr7_4:46970596-46970615 None:intergenic 45.0%
ATGGATGTCTTGCTTAGCTG+TGG + chr7_4:46970689-46970708 Msa1157940:intron 45.0%
! ATGATGTTTGACAGGGTGCT+TGG + chr7_4:46970784-46970803 Msa1157940:intron 45.0%
! GTGTAGTTTGCCTCCTTTCT+TGG - chr7_4:46970884-46970903 None:intergenic 45.0%
GAAAGGAGGCAAACTACACA+AGG + chr7_4:46970885-46970904 Msa1157940:CDS 45.0%
!! CACAGTTAAGAGTACTAGCC+GGG - chr7_4:46971415-46971434 None:intergenic 45.0%
TCCCTGCATCATATGCAAAC+TGG + chr7_4:46971645-46971664 Msa1157940:CDS 45.0%
GTCCAGTTTGCATATGATGC+AGG - chr7_4:46971650-46971669 None:intergenic 45.0%
ATGTATGCAAGCTCACTGCT+AGG - chr7_4:46971784-46971803 None:intergenic 45.0%
GGCCACTATTATGCTACATG+AGG - chr7_4:46971858-46971877 None:intergenic 45.0%
CTTCATCTTCCAAGCTAGAC+TGG - chr7_4:46971987-46972006 None:intergenic 45.0%
CCAAATCTATATCCAAGCGG+TGG - chr7_4:46972077-46972096 None:intergenic 45.0%
CCACCGCTTGGATATAGATT+TGG + chr7_4:46972074-46972093 Msa1157940:CDS 45.0%
AACTCTCGGGATGATTCCAT+CGG + chr7_4:46972573-46972592 Msa1157940:CDS 45.0%
ATCGGTGAAGGATCATCTGA+GGG + chr7_4:46972591-46972610 Msa1157940:CDS 45.0%
! AAGTCAGATGATGGTCCCTT+CGG + chr7_4:46972795-46972814 Msa1157940:CDS 45.0%
!! TGGCTTTGGTAAGAACCGAA+GGG - chr7_4:46972813-46972832 None:intergenic 45.0%
TACCAAAGCCAGGAGCAAAT+TGG + chr7_4:46972822-46972841 Msa1157940:CDS 45.0%
! GAATCAAGCCAATTTGCTCC+TGG - chr7_4:46972833-46972852 None:intergenic 45.0%
CTTGATTCAGTCCCTCATCA+AGG + chr7_4:46972845-46972864 Msa1157940:CDS 45.0%
AATCCCGTTGTCCTTGATGA+GGG - chr7_4:46972859-46972878 None:intergenic 45.0%
CAGGAAGTTACTTAATCCCC+AGG + chr7_4:46973072-46973091 Msa1157940:CDS 45.0%
CTCTTCAGACCAGCAAATTC+AGG + chr7_4:46973208-46973227 Msa1157940:CDS 45.0%
ATTTAGTCAGAGCCTTGGCA+CGG + chr7_4:46973262-46973281 Msa1157940:CDS 45.0%
ACCTATGGAGTAGTAGATGC+AGG + chr7_4:46973395-46973414 Msa1157940:CDS 45.0%
ACCTGCATCTACTACTCCAT+AGG - chr7_4:46973399-46973418 None:intergenic 45.0%
! TCTAGTGGATGAGAAGATGG+TGG - chr7_4:46973446-46973465 None:intergenic 45.0%
CGTCCACTGAAATGATCTAG+TGG - chr7_4:46973461-46973480 None:intergenic 45.0%
TGGTGCCTGATGATATGACA+TGG + chr7_4:46973498-46973517 Msa1157940:CDS 45.0%
TAGGATCATACTTGAGGTCG+TGG + chr7_4:46973561-46973580 Msa1157940:CDS 45.0%
ACTGGAGCAAGATCCACAAA+AGG + chr7_4:46973627-46973646 Msa1157940:three_prime_UTR 45.0%
CTGGAGCAAGATCCACAAAA+GGG + chr7_4:46973628-46973647 Msa1157940:three_prime_UTR 45.0%
!!! AAATTATATTGTTTTAATTT+TGG - chr7_4:46966246-46966265 None:intergenic 5.0%
!! ATCATAATTAAATAAATATT+TGG - chr7_4:46966291-46966310 None:intergenic 5.0%
!!! TTTTTTAATATTTTATCTTT+AGG + chr7_4:46966695-46966714 Msa1157940:intron 5.0%
!!! TTTTTAATATTTTATCTTTA+GGG + chr7_4:46966696-46966715 Msa1157940:intron 5.0%
!!! TTTAATATTGTTTTTTTATT+TGG + chr7_4:46966878-46966897 Msa1157940:intron 5.0%
!! AAAATTATAATTTGAATATT+TGG + chr7_4:46966936-46966955 Msa1157940:intron 5.0%
CTCAGCTCCACACTTTCCTA+GGG - chr7_4:46966416-46966435 None:intergenic 50.0%
CGAGTGTGAAGGGCAATTTG+GGG - chr7_4:46966566-46966585 None:intergenic 50.0%
GCGAGTGTGAAGGGCAATTT+GGG - chr7_4:46966567-46966586 None:intergenic 50.0%
AGCGAGTGTGAAGGGCAATT+TGG - chr7_4:46966568-46966587 None:intergenic 50.0%
AAATTGTAGGCGGTGGTGAG+GGG - chr7_4:46966645-46966664 None:intergenic 50.0%
GAAATTGTAGGCGGTGGTGA+GGG - chr7_4:46966646-46966665 None:intergenic 50.0%
TGAAATTGTAGGCGGTGGTG+AGG - chr7_4:46966647-46966666 None:intergenic 50.0%
ACCACCGCCTACAATTTCAC+CGG + chr7_4:46966648-46966667 Msa1157940:five_prime_UTR 50.0%
GACTGCATGGTGAAGTTGAG+AGG + chr7_4:46966958-46966977 Msa1157940:intron 50.0%
AGAGCAAACTGCACCGAACT+TGG - chr7_4:46967448-46967467 None:intergenic 50.0%
!! AAGTTCGGTGCAGTTTGCTC+TGG + chr7_4:46967447-46967466 Msa1157940:intron 50.0%
! GGTGCAAGCCTGGTTAGTTA+TGG + chr7_4:46968000-46968019 Msa1157940:CDS 50.0%
ACCAAAGGGTTGTTGCCAAG+CGG + chr7_4:46968124-46968143 Msa1157940:CDS 50.0%
GGGAACAGATTGGCATCAGT+TGG + chr7_4:46968145-46968164 Msa1157940:CDS 50.0%
!! CAGGGGTGCTTCACTTTGTT+CGG + chr7_4:46969337-46969356 Msa1157940:intron 50.0%
!! AGGGGTGCTTCACTTTGTTC+GGG + chr7_4:46969338-46969357 Msa1157940:intron 50.0%
TGACATCCGGGTCATATTCC+TGG + chr7_4:46970056-46970075 Msa1157940:CDS 50.0%
GACATCCGGGTCATATTCCT+GGG + chr7_4:46970057-46970076 Msa1157940:CDS 50.0%
TGCTTTCTCCTCTTCATCCC+AGG - chr7_4:46970077-46970096 None:intergenic 50.0%
CTCATTGCCTTGTCCCATTG+AGG - chr7_4:46970119-46970138 None:intergenic 50.0%
ATCGCTGCTGCACTTGATAC+TGG + chr7_4:46970156-46970175 Msa1157940:intron 50.0%
TCGCTGCTGCACTTGATACT+GGG + chr7_4:46970157-46970176 Msa1157940:intron 50.0%
! ATACTGGGCGGCTTTAGTGA+AGG + chr7_4:46970172-46970191 Msa1157940:intron 50.0%
! AATTGGGTCTTTGGGAAGGG+AGG - chr7_4:46970465-46970484 None:intergenic 50.0%
! GGGAATTGGGTCTTTGGGAA+GGG - chr7_4:46970468-46970487 None:intergenic 50.0%
TGTCTTGCTTAGCTGTGGTC+TGG + chr7_4:46970694-46970713 Msa1157940:intron 50.0%
AACAAGTTCGTGCTGCGTCT+TGG - chr7_4:46971363-46971382 None:intergenic 50.0%
!! TGTTTTGAGCACAGGAGTCC+AGG + chr7_4:46971930-46971949 Msa1157940:CDS 50.0%
!! GTTCTCTGGGACGCTAACAA+TGG - chr7_4:46972013-46972032 None:intergenic 50.0%
AAAGGAGCTCCTTCACCGAT+GGG - chr7_4:46972180-46972199 None:intergenic 50.0%
TCAGGATGATCCCATCAGTG+AGG + chr7_4:46972374-46972393 Msa1157940:CDS 50.0%
CAGGATGATCCCATCAGTGA+GGG + chr7_4:46972375-46972394 Msa1157940:CDS 50.0%
AGGATGATCCCATCAGTGAG+GGG + chr7_4:46972376-46972395 Msa1157940:CDS 50.0%
CTCAGATGATCCTTCACCGA+TGG - chr7_4:46972592-46972611 None:intergenic 50.0%
CATCGGTGAAGGATCATCTG+AGG + chr7_4:46972590-46972609 Msa1157940:CDS 50.0%
GATCATCTGAGGGTCATGCA+TGG + chr7_4:46972601-46972620 Msa1157940:CDS 50.0%
CCTGTTGGCAGTGTAGTCAT+GGG - chr7_4:46972670-46972689 None:intergenic 50.0%
!! CTGGCTTTGGTAAGAACCGA+AGG - chr7_4:46972814-46972833 None:intergenic 50.0%
CTTCGGTTCTTACCAAAGCC+AGG + chr7_4:46972812-46972831 Msa1157940:CDS 50.0%
! AGCCAATTTGCTCCTGGCTT+TGG - chr7_4:46972827-46972846 None:intergenic 50.0%
CAGTCCCTCATCAAGGACAA+CGG + chr7_4:46972852-46972871 Msa1157940:CDS 50.0%
AGTCCCTCATCAAGGACAAC+GGG + chr7_4:46972853-46972872 Msa1157940:CDS 50.0%
CAATCCCGTTGTCCTTGATG+AGG - chr7_4:46972860-46972879 None:intergenic 50.0%
CTCATCAAGGACAACGGGAT+TGG + chr7_4:46972858-46972877 Msa1157940:CDS 50.0%
! TGCTGGTCTGAAGAGAACCA+AGG - chr7_4:46973203-46973222 None:intergenic 50.0%
! CAAATTCAGGGTGCCTGGAA+TGG + chr7_4:46973221-46973240 Msa1157940:CDS 50.0%
TTTAGTCAGAGCCTTGGCAC+GGG + chr7_4:46973263-46973282 Msa1157940:CDS 50.0%
TTCCTTTCGCCCAGAACCTA+TGG + chr7_4:46973380-46973399 Msa1157940:CDS 50.0%
CATACTTGAGGTCGTGGAAC+CGG + chr7_4:46973567-46973586 Msa1157940:CDS 50.0%
ACTTGTGGACAGCTAGCCCT+AGG + chr7_4:46966397-46966416 Msa1157940:five_prime_UTR 55.0%
CAGCTAGCCCTAGGAAAGTG+TGG + chr7_4:46966406-46966425 Msa1157940:five_prime_UTR 55.0%
GCTCAGCTCCACACTTTCCT+AGG - chr7_4:46966417-46966436 None:intergenic 55.0%
TGCCCTTCACACTCGCTCTT+AGG + chr7_4:46966571-46966590 Msa1157940:five_prime_UTR 55.0%
ACCGGTGAAATTGTAGGCGG+TGG - chr7_4:46966652-46966671 None:intergenic 55.0%
!! CGGTGCAGTTTGCTCTGGAA+TGG + chr7_4:46967452-46967471 Msa1157940:intron 55.0%
CCAAAGGGTTGTTGCCAAGC+GGG + chr7_4:46968125-46968144 Msa1157940:CDS 55.0%
GTTGCCAAGCGGGAACAGAT+TGG + chr7_4:46968135-46968154 Msa1157940:CDS 55.0%
GATGCCAATCTGTTCCCGCT+TGG - chr7_4:46968142-46968161 None:intergenic 55.0%
CTGCTGCACTTGATACTGGG+CGG + chr7_4:46970160-46970179 Msa1157940:intron 55.0%
! GGGGAATTGGGTCTTTGGGA+AGG - chr7_4:46970469-46970488 None:intergenic 55.0%
GTGGGAGGAAGACCCAAGAA+AGG + chr7_4:46970868-46970887 Msa1157940:CDS 55.0%
GGAGGAAGACCCAAGAAAGG+AGG + chr7_4:46970871-46970890 Msa1157940:CDS 55.0%
! TATGGAGGGACGGGTTCTCT+GGG - chr7_4:46972026-46972045 None:intergenic 55.0%
! TTATGGAGGGACGGGTTCTC+TGG - chr7_4:46972027-46972046 None:intergenic 55.0%
CAGGATGATCCCATCGGTGA+AGG + chr7_4:46972168-46972187 Msa1157940:CDS 55.0%
GAAAGGAGCTCCTTCACCGA+TGG - chr7_4:46972181-46972200 None:intergenic 55.0%
! TGTCGAGAGACGGGTTCTGT+TGG - chr7_4:46972233-46972252 None:intergenic 55.0%
GGATGATCCCATCAGTGAGG+GGG + chr7_4:46972377-46972396 Msa1157940:CDS 55.0%
CGGGATGATTCCATCGGTGA+AGG + chr7_4:46972579-46972598 Msa1157940:CDS 55.0%
CCCATGACTACACTGCCAAC+AGG + chr7_4:46972667-46972686 Msa1157940:CDS 55.0%
GCCTGTTGGCAGTGTAGTCA+TGG - chr7_4:46972671-46972690 None:intergenic 55.0%
CACTGCCAACAGGCTATCAC+TGG + chr7_4:46972677-46972696 Msa1157940:CDS 55.0%
GATCAAGGTCAGAGGCAAGC+TGG + chr7_4:46973002-46973021 Msa1157940:CDS 55.0%
! CAGCTAGTGGATCTTGCCTG+GGG - chr7_4:46973091-46973110 None:intergenic 55.0%
! GCAGCTAGTGGATCTTGCCT+GGG - chr7_4:46973092-46973111 None:intergenic 55.0%
! TGCAGCTAGTGGATCTTGCC+TGG - chr7_4:46973093-46973112 None:intergenic 55.0%
! ACCAGCAAATTCAGGGTGCC+TGG + chr7_4:46973216-46973235 Msa1157940:CDS 55.0%
TCCAGGCACCCTGAATTTGC+TGG - chr7_4:46973220-46973239 None:intergenic 55.0%
GCCTGGAATGGATCTGGCAA+TGG + chr7_4:46973233-46973252 Msa1157940:CDS 55.0%
GCCATTGCCAGATCCATTCC+AGG - chr7_4:46973237-46973256 None:intergenic 55.0%
!! AGGTTCTGGGCGAAAGGAAC+TGG - chr7_4:46973379-46973398 None:intergenic 55.0%
!! CTCCATAGGTTCTGGGCGAA+AGG - chr7_4:46973385-46973404 None:intergenic 55.0%
TTCAGTGGACGTGATGCACC+TGG + chr7_4:46973470-46973489 Msa1157940:CDS 55.0%
GAGCTGAGCCGAGAGCAAGT+TGG + chr7_4:46966428-46966447 Msa1157940:five_prime_UTR 60.0%
! CCTTCGCGCCAACTTGCTCT+CGG - chr7_4:46966439-46966458 None:intergenic 60.0%
CCCGCTTGGCAACAACCCTT+TGG - chr7_4:46968128-46968147 None:intergenic 60.0%
ACCACCATGCTCCTCCTCCT+GGG - chr7_4:46971956-46971975 None:intergenic 60.0%
AAAGGGGCCCCCTCACTGAT+GGG - chr7_4:46972387-46972406 None:intergenic 60.0%
!! AGAGGGTGCTACCATGCGAG+GGG - chr7_4:46973144-46973163 None:intergenic 60.0%
!! GAGAGGGTGCTACCATGCGA+GGG - chr7_4:46973145-46973164 None:intergenic 60.0%
!! TGAGAGGGTGCTACCATGCG+AGG - chr7_4:46973146-46973165 None:intergenic 60.0%
! CAGGGTGCCTGGAATGGATC+TGG + chr7_4:46973227-46973246 Msa1157940:CDS 60.0%
ACGTGATGCACCTGGTGCTC+TGG + chr7_4:46973478-46973497 Msa1157940:CDS 60.0%
! TCATCAGGCACCAGAGCACC+AGG - chr7_4:46973491-46973510 None:intergenic 60.0%
! CCGAGAGCAAGTTGGCGCGA+AGG + chr7_4:46966436-46966455 Msa1157940:five_prime_UTR 65.0%
AGGCGGTGGTGAGGGGAAAG+TGG - chr7_4:46966638-46966657 None:intergenic 65.0%
CACCACCATGCTCCTCCTCC+TGG - chr7_4:46971957-46971976 None:intergenic 65.0%
CGATGACGAGCTCCACCGCT+TGG + chr7_4:46972062-46972081 Msa1157940:CDS 65.0%
GAAAGGGGCCCCCTCACTGA+TGG - chr7_4:46972388-46972407 None:intergenic 65.0%
GGCTGTTAGTGCCCCTCGCA+TGG + chr7_4:46973130-46973149 Msa1157940:CDS 65.0%
AGTCAGAGCCTTGGCACGGG+AGG + chr7_4:46973266-46973285 Msa1157940:CDS 65.0%
GGGAGTTTCCTCCCGTGCCA+AGG - chr7_4:46973277-46973296 None:intergenic 65.0%
GAGCACAGGAGTCCAGGCCC+AGG + chr7_4:46971936-46971955 Msa1157940:CDS 70.0%
CACAGGAGTCCAGGCCCAGG+AGG + chr7_4:46971939-46971958 Msa1157940:CDS 70.0%
AGGAGTCCAGGCCCAGGAGG+AGG + chr7_4:46971942-46971961 Msa1157940:CDS 70.0%
CATGCTCCTCCTCCTGGGCC+TGG - chr7_4:46971951-46971970 None:intergenic 70.0%
CAGGCCCAGGAGGAGGAGCA+TGG + chr7_4:46971949-46971968 Msa1157940:CDS 70.0%
! GCCCAGGAGGAGGAGCATGG+TGG + chr7_4:46971952-46971971 Msa1157940:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 46966222 46973989 46966222 ID=Msa1157940;Name=Msa1157940
chr7_4 mRNA 46966222 46973989 46966222 ID=Msa1157940-mRNA-1;Parent=Msa1157940;Name=Msa1157940-mRNA-1;_AED=0.06;_eAED=0.06;_QI=543|1|1|1|0.8|0.63|11|365|983
chr7_4 exon 46966222 46966669 46966222 ID=Msa1157940-mRNA-1:exon:12411;Parent=Msa1157940-mRNA-1
chr7_4 exon 46967866 46968287 46967866 ID=Msa1157940-mRNA-1:exon:12412;Parent=Msa1157940-mRNA-1
chr7_4 exon 46968390 46968526 46968390 ID=Msa1157940-mRNA-1:exon:12413;Parent=Msa1157940-mRNA-1
chr7_4 exon 46969340 46969453 46969340 ID=Msa1157940-mRNA-1:exon:12414;Parent=Msa1157940-mRNA-1
chr7_4 exon 46969542 46969625 46969542 ID=Msa1157940-mRNA-1:exon:12415;Parent=Msa1157940-mRNA-1
chr7_4 exon 46969976 46970149 46969976 ID=Msa1157940-mRNA-1:exon:12416;Parent=Msa1157940-mRNA-1
chr7_4 exon 46970798 46970954 46970798 ID=Msa1157940-mRNA-1:exon:12417;Parent=Msa1157940-mRNA-1
chr7_4 exon 46971356 46971516 46971356 ID=Msa1157940-mRNA-1:exon:12418;Parent=Msa1157940-mRNA-1
chr7_4 exon 46971622 46971748 46971622 ID=Msa1157940-mRNA-1:exon:12419;Parent=Msa1157940-mRNA-1
chr7_4 exon 46971922 46973711 46971922 ID=Msa1157940-mRNA-1:exon:12420;Parent=Msa1157940-mRNA-1
chr7_4 exon 46973744 46973989 46973744 ID=Msa1157940-mRNA-1:exon:12421;Parent=Msa1157940-mRNA-1
chr7_4 five_prime_UTR 46966222 46966669 46966222 ID=Msa1157940-mRNA-1:five_prime_utr;Parent=Msa1157940-mRNA-1
chr7_4 five_prime_UTR 46967866 46967960 46967866 ID=Msa1157940-mRNA-1:five_prime_utr;Parent=Msa1157940-mRNA-1
chr7_4 CDS 46967961 46968287 46967961 ID=Msa1157940-mRNA-1:cds;Parent=Msa1157940-mRNA-1
chr7_4 CDS 46968390 46968526 46968390 ID=Msa1157940-mRNA-1:cds;Parent=Msa1157940-mRNA-1
chr7_4 CDS 46969340 46969453 46969340 ID=Msa1157940-mRNA-1:cds;Parent=Msa1157940-mRNA-1
chr7_4 CDS 46969542 46969625 46969542 ID=Msa1157940-mRNA-1:cds;Parent=Msa1157940-mRNA-1
chr7_4 CDS 46969976 46970149 46969976 ID=Msa1157940-mRNA-1:cds;Parent=Msa1157940-mRNA-1
chr7_4 CDS 46970798 46970954 46970798 ID=Msa1157940-mRNA-1:cds;Parent=Msa1157940-mRNA-1
chr7_4 CDS 46971356 46971516 46971356 ID=Msa1157940-mRNA-1:cds;Parent=Msa1157940-mRNA-1
chr7_4 CDS 46971622 46971748 46971622 ID=Msa1157940-mRNA-1:cds;Parent=Msa1157940-mRNA-1
chr7_4 CDS 46971922 46973592 46971922 ID=Msa1157940-mRNA-1:cds;Parent=Msa1157940-mRNA-1
chr7_4 three_prime_UTR 46973593 46973711 46973593 ID=Msa1157940-mRNA-1:three_prime_utr;Parent=Msa1157940-mRNA-1
chr7_4 three_prime_UTR 46973744 46973989 46973744 ID=Msa1157940-mRNA-1:three_prime_utr;Parent=Msa1157940-mRNA-1
Gene Sequence

>Msa1157940

ATGCTAATGGCTGTTGATCAAAGAAGAAAGCAATTAAATGGTGCAAGCCTGGTTAGTTATGGTTCTCCAGAGCAATATAGGACTAAACGAAAGAATTTTGGACCACCAGTGCAAAGTGATCTAAACATGAAATCTCACATTTCTGTTGAATGGGATGCTAATCACCAAAGGGTTGTTGCCAAGCGGGAACAGATTGGCATCAGTTGGAGACAAACGAGACCATTTGCCAGATTTGATCACGATGGACATGAAGTCTTGGCAGATGTGCTTGCCATGCCTGAAGAAATTTTTGGCCTGGATAGTTTAAGTGAAGTGCTTTCCTATGAGGTTTGGAATACACAGCTTTCAGACAATGAGAGAAATTTTCTTAAGCAGTTTCTTCCTGGTGACTTAGAGCCAAATCAAGTTGTCCAGGAATTACTTTCTGGAGATGAATTTCACTTTGGAAACCCTTTCTTAAAATGGGGTGCTTCACTTTGTTCGGGCGACCTTCATCCAGATATGATTGTTTACCATGAGAAACATCTAAAAGCTGATAGAAGAGCATACTTCTCACAATTACGTAAATATCATAAGGATATGATTGGATTTCTAATTAAGCTGAAGGAGAGGTGGGAGACCTGCAAAAGTCCAGAAAAGGAAATTCTACCAAATATTCTGAGGTCAAAGAATGATATAAAGAAAAGAAAATGGTCAAACTTGGATGAATTCAGAGATGATGATCATGATGGGAATGTTACAGTGACATCCGGGTCATATTCCTGGGATGAAGAGGAGAAAGCATACGGTGACATCCAAATTTCCTCAATGGGACAAGGCAATGAGCTTCAAAGAAGGGTGCTTGGCGAAGACTTCAATAAAGGTGAACCAAGAAATATGATGGCTTCAGCTTTTATGCTTAATAATGTGGGAGGAAGACCCAAGAAAGGAGGCAAACTACACAAGGATAACATTCATGCTAATGACGGTGACCAATATATGTCATATATCAAGATTACCAAGACGCAGCACGAACTTGTTAAGAGTTTGAAGGTATCATCTAAAAGCATCCCGGCTAGTACTCTTAACTGTGTTTTGGGTGACCTTGATAACTTTCATGTGCAACCGTTCAAATTATTTATCAAAGAAGAACAGAAGAACTTGCATGAGCATTGGTTACAATTGGTGAAGAAACATCTCCCTGCATCATATGCAAACTGGACAGAGAGACTGATACAGAAACATGCAATGAGAAATTCTTTGTTGCTTGAAATGAAAGATAAATCAAATGTACTGGTAGAGGATGATGATGTTTTGAGCACAGGAGTCCAGGCCCAGGAGGAGGAGCATGGTGGTGTTAATAACCAGTCTAGCTTGGAAGATGAAGATTCCATTGTTAGCGTCCCAGAGAACCCGTCCCTCCATAATTCTTATCACAACAGCGATGACGAGCTCCACCGCTTGGATATAGATTTGGTAAAAGATGTTTTATCAAAAGGAGATGATGCTTCACATAACAAAACTGGAGATTCAACGATTATGAAATGTCAGGATGATCCCATCGGTGAAGGAGCTCCTTTCTCATCCGATGAAGATTCTTTTGTTAGATTCCAACAGAACCCGTCTCTCGACAATTCTTATCACAGCGGCGATGACGAGCTCCACCACTTACATATAGATTTGGAGAAAAATATTTTATCAAAAGGAGGCGACTCTTCACAGTACACAATTGAACATTCAATGGTTATGAACTCTCAGGATGATCCCATCAGTGAGGGGGCCCCTTTCTCGTATAATGATACTGTTGATAGATTCCCAGAGAATTCCTCCGTTAATAAATCTTATCACAGCGATGATGAGGAGCTCCACCCCTTTCATATAGATTTGGAAAAAAATATTTTATCAAAAGGAGATGATGCTTCGCAGAACAAAACCGAGCATTCAAGGATTATGAACTCTCGGGATGATTCCATCGGTGAAGGATCATCTGAGGGTCATGCATGGCAAGCAGTTGAAATGTCGCACCCTTACTATGATTTAAGTATGACCCATGACTACACTGCCAACAGGCTATCACTGGTAAATTCACAAATTAACCAAGATAGACAAACCCGAATGATTGGTCCAGAATCTAATTTACACCAAGAAAACATTGGTAAGGAGTTGTTACACAGGAAGTCAGATGATGGTCCCTTCGGTTCTTACCAAAGCCAGGAGCAAATTGGCTTGATTCAGTCCCTCATCAAGGACAACGGGATTGGCTCCTATCATCATGAACAAAAAAGAGCTGGGTTAAATTTCCAGGCTTCAAACGATATTCCAATGGGGAATGGCCAATTTTATAGTCATTTTAAGGAGTCTTTGCAAACGTCTCTAACATTGGATCAAGGTCAGAGGCAAGCTGGTAATATTTTCATGCCAGAAAACGTATCAGGTAATATTTATTCTGACACAGGAAGTTACTTAATCCCCAGGCAAGATCCACTAGCTGCAAGAAATATTACTGATTGGGCTGTTAGTGCCCCTCGCATGGTAGCACCCTCTCAATCTCACATTAATACCGATAATTTCATTGGTCAGCCTTGGTTCTCTTCAGACCAGCAAATTCAGGGTGCCTGGAATGGATCTGGCAATGGCAGTCTATTTAGTCAGAGCCTTGGCACGGGAGGAAACTCCCATCATAACTTATTTAGTGTTCTATCTCAATATAACCAATTACGTTCAGGTAACCCTTATGAGTCAATCAGACACACTGACCAGTTCCTTTCGCCCAGAACCTATGGAGTAGTAGATGCAGGTACACATAGGATCAATGCTGTTGTACCACCATCTTCTCATCCACTAGATCATTTCAGTGGACGTGATGCACCTGGTGCTCTGGTGCCTGATGATATGACATGGATGAGCTTGCCTCCTCAAAATCCTACTTTAAATGATCAAATAGGATCATACTTGAGGTCGTGGAACCGGTAA
Protein sequence

>Msa1157940

MLMAVDQRRKQLNGASLVSYGSPEQYRTKRKNFGPPVQSDLNMKSHISVEWDANHQRVVAKREQIGISWRQTRPFARFDHDGHEVLADVLAMPEEIFGLDSLSEVLSYEVWNTQLSDNERNFLKQFLPGDLEPNQVVQELLSGDEFHFGNPFLKWGASLCSGDLHPDMIVYHEKHLKADRRAYFSQLRKYHKDMIGFLIKLKERWETCKSPEKEILPNILRSKNDIKKRKWSNLDEFRDDDHDGNVTVTSGSYSWDEEEKAYGDIQISSMGQGNELQRRVLGEDFNKGEPRNMMASAFMLNNVGGRPKKGGKLHKDNIHANDGDQYMSYIKITKTQHELVKSLKVSSKSIPASTLNCVLGDLDNFHVQPFKLFIKEEQKNLHEHWLQLVKKHLPASYANWTERLIQKHAMRNSLLLEMKDKSNVLVEDDDVLSTGVQAQEEEHGGVNNQSSLEDEDSIVSVPENPSLHNSYHNSDDELHRLDIDLVKDVLSKGDDASHNKTGDSTIMKCQDDPIGEGAPFSSDEDSFVRFQQNPSLDNSYHSGDDELHHLHIDLEKNILSKGGDSSQYTIEHSMVMNSQDDPISEGAPFSYNDTVDRFPENSSVNKSYHSDDEELHPFHIDLEKNILSKGDDASQNKTEHSRIMNSRDDSIGEGSSEGHAWQAVEMSHPYYDLSMTHDYTANRLSLVNSQINQDRQTRMIGPESNLHQENIGKELLHRKSDDGPFGSYQSQEQIGLIQSLIKDNGIGSYHHEQKRAGLNFQASNDIPMGNGQFYSHFKESLQTSLTLDQGQRQAGNIFMPENVSGNIYSDTGSYLIPRQDPLAARNITDWAVSAPRMVAPSQSHINTDNFIGQPWFSSDQQIQGAWNGSGNGSLFSQSLGTGGNSHHNLFSVLSQYNQLRSGNPYESIRHTDQFLSPRTYGVVDAGTHRINAVVPPSSHPLDHFSGRDAPGALVPDDMTWMSLPPQNPTLNDQIGSYLRSWNR*