AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0799150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0799150 MtrunA17_Chr5g0404381 98.718 312 4 0 1 312 1 312 0.0 643
Msa0799150 MtrunA17_Chr5g0396951 32.872 289 175 7 41 312 15 301 1.24e-42 149
Msa0799150 MtrunA17_Chr2g0298101 33.798 287 169 7 43 310 14 298 5.72e-41 145
Msa0799150 MtrunA17_Chr6g0449291 32.056 287 177 7 39 310 1 284 2.42e-36 132
Msa0799150 MtrunA17_Chr7g0275331 31.379 290 179 7 40 311 13 300 8.24e-36 131
Msa0799150 MtrunA17_Chr4g0049381 31.673 281 172 7 50 312 23 301 3.77e-34 127
Msa0799150 MtrunA17_Chr4g0000441 45.161 93 50 1 36 127 21 113 1.17e-19 84.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0799150 AT5G66530.1 78.623 276 59 0 37 312 32 307 3.93e-167 466
Msa0799150 AT5G66530.2 78.623 276 59 0 37 312 32 307 3.93e-167 466
Msa0799150 AT5G66530.3 78.623 276 59 0 37 312 32 307 3.93e-167 466
Msa0799150 AT5G66530.4 78.623 276 59 0 37 312 4 279 8.82e-167 464
Msa0799150 AT4G23730.1 34.286 280 163 8 52 312 26 303 8.35e-41 144
Msa0799150 AT5G57330.1 32.993 294 164 8 42 310 9 294 1.63e-40 144
Msa0799150 AT3G01590.1 33.449 287 165 8 45 312 8 287 7.92e-40 142
Msa0799150 AT3G01590.2 33.449 287 165 8 45 312 8 287 7.92e-40 142
Msa0799150 AT4G23730.3 33.916 286 162 9 52 312 26 309 4.98e-39 140
Msa0799150 AT5G14500.1 31.884 276 171 6 52 312 14 287 2.49e-38 138
Msa0799150 AT4G23730.2 34.701 268 154 8 64 312 3 268 2.98e-38 137
Msa0799150 AT4G25900.1 32.180 289 166 10 44 312 34 312 6.61e-38 137
Msa0799150 AT3G61610.2 31.769 277 169 7 52 310 19 293 6.55e-33 124
Msa0799150 AT3G61610.1 31.769 277 169 7 52 310 25 299 8.30e-33 124
Msa0799150 AT5G14500.2 29.236 301 171 7 52 312 14 312 1.19e-32 123

Find 231 sgRNAs with CRISPR-Local

Find 354 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTATTTCTTGGTTCTTAA+TGG 0.134775 5_3:+12243208 None:intergenic
CTACCCTCAATTGGATTATT+AGG 0.155007 5_3:+12246368 None:intergenic
TCTCGCTTCCAAATGCTATT+TGG 0.165282 5_3:-12245213 Msa0799150:three_prime_UTR
AAAGTAAGTAAGAACCTTAT+TGG 0.201080 5_3:+12247835 None:intergenic
AAGCTACAATTTCCTGCTTT+TGG 0.212182 5_3:-12245176 Msa0799150:three_prime_UTR
CTTCGTGTCTATGCAATTTC+AGG 0.217546 5_3:+12243683 None:intergenic
GCATGGATTTGCAAGGAATT+TGG 0.218398 5_3:-12247031 Msa0799150:CDS
ACTCGTGGGCAACACCATTT+AGG 0.222811 5_3:-12244687 Msa0799150:three_prime_UTR
CGGATGCATGGCAGACCTTC+TGG 0.231811 5_3:+12244375 None:intergenic
TTATTTATATTTATTATATA+TGG 0.233045 5_3:+12248334 None:intergenic
TGGAATTGCATTTGCGAGTT+TGG 0.237144 5_3:-12248052 Msa0799150:CDS
CAAATTATCAAAAGGGGTTT+TGG 0.241386 5_3:+12243632 None:intergenic
CGGAGGATAGTTCTATTTCT+TGG 0.243268 5_3:+12243198 None:intergenic
TAAAACCAAATGCTGCAATA+TGG 0.249420 5_3:+12244449 None:intergenic
CAGCTTTCATGCTTTATATA+AGG 0.258159 5_3:-12246914 Msa0799150:intron
TCTATTTCTTGGTTCTTAAT+GGG 0.263148 5_3:+12243209 None:intergenic
CCTCACGAGATATTGTTTCT+TGG 0.274035 5_3:+12243744 None:intergenic
GCATCAGTTAAGGGGTTAAA+AGG 0.284648 5_3:-12246419 Msa0799150:CDS
TTGCAAGAAGATGATATGTT+AGG 0.295714 5_3:+12244770 None:intergenic
GTTGTATTGTGATTGAAATT+TGG 0.306186 5_3:-12248273 Msa0799150:five_prime_UTR
GTTGCCCACGAGTTCTTTGC+TGG 0.310243 5_3:+12244697 None:intergenic
CATCCGTAATGTTCCATAAC+AGG 0.311851 5_3:-12244358 Msa0799150:three_prime_UTR
TGCAGTACTATCACCCTAAA+TGG 0.313791 5_3:+12244673 None:intergenic
GGTTCTACATTTGCTATGTT+TGG 0.315155 5_3:-12245256 Msa0799150:three_prime_UTR
GATGAGAATGAAAATTTATC+TGG 0.317815 5_3:+12244804 None:intergenic
TGCCCTGCACACATACTTTC+GGG 0.318043 5_3:-12246709 Msa0799150:intron
CTTTCAGCATGTGCAGGTCT+TGG 0.327570 5_3:+12243974 None:intergenic
TTGGAGAGATGTTCAAATAT+AGG 0.333895 5_3:+12243278 None:intergenic
GGAATTGCATTTGCGAGTTT+GGG 0.335393 5_3:-12248051 Msa0799150:CDS
AAAAGAAGGTCTTTGCCATT+AGG 0.336299 5_3:+12247892 None:intergenic
ATAAGAGCACAACCCAAAAC+TGG 0.339762 5_3:-12244058 Msa0799150:three_prime_UTR
CGATTTAATTATATCCAAAC+AGG 0.341451 5_3:-12244860 Msa0799150:three_prime_UTR
CCACATTGCTTTCCACAGTT+TGG 0.343104 5_3:-12247346 Msa0799150:CDS
GACTCGAACCCGCGGAAATT+CGG 0.344921 5_3:+12248386 None:intergenic
AGAAGAAATGTGTCTATATA+TGG 0.346373 5_3:+12244140 None:intergenic
CCATGATCGTTGGCTTTGTT+AGG 0.349142 5_3:+12243864 None:intergenic
CTTGAGCTTGGCAAAGAGAT+TGG 0.350647 5_3:+12244508 None:intergenic
TTATAACATGAAACCTGTTA+TGG 0.354136 5_3:+12244345 None:intergenic
CTTTCTTCACTACCCTCAAT+TGG 0.356277 5_3:+12246359 None:intergenic
TTGGTGGTTGCATTACTTCC+TGG 0.357635 5_3:-12247921 Msa0799150:CDS
CTGCCCTGCACACATACTTT+CGG 0.358207 5_3:-12246710 Msa0799150:CDS
TTCTATGTCCAAATAGCATT+TGG 0.360732 5_3:+12245205 None:intergenic
GATGAGTTGCAGCTTGATAA+TGG 0.362819 5_3:-12245791 Msa0799150:CDS
TATATATGGACTGCAATAAT+TGG 0.366090 5_3:+12244154 None:intergenic
AAGGGTCTGCTAAATCTTCC+AGG 0.371042 5_3:+12244649 None:intergenic
CAGTAATCATGCTCTCAAAC+AGG 0.371980 5_3:-12244321 Msa0799150:three_prime_UTR
TGCTTTCCACAGTTTGGTCC+TGG 0.376361 5_3:-12247340 Msa0799150:CDS
AAAACCAAATGCTGCAATAT+GGG 0.376873 5_3:+12244450 None:intergenic
TGTAAGTGGTGCATCAGTTA+AGG 0.379288 5_3:-12246429 Msa0799150:CDS
CTACAGCAAATGCTGGTTGC+CGG 0.386630 5_3:+12243917 None:intergenic
TGACGGCCGGTATATTCATT+TGG 0.391589 5_3:+12244561 None:intergenic
GATCCCCATATTGCAGCATT+TGG 0.394144 5_3:-12244454 Msa0799150:three_prime_UTR
CTGTTTGGATATAATTAAAT+CGG 0.394862 5_3:+12244861 None:intergenic
TCAATTGGATTATTAGGATC+TGG 0.402876 5_3:+12246374 None:intergenic
TCCATGCTCAAATTATCAAA+AGG 0.404420 5_3:+12243624 None:intergenic
TGCAGCTACTCCAACTCAAT+GGG 0.405401 5_3:+12243237 None:intergenic
ATATACCGGCCGTCATGATC+AGG 0.405563 5_3:-12244553 Msa0799150:three_prime_UTR
GTAAGTGGTGCATCAGTTAA+GGG 0.409071 5_3:-12246428 Msa0799150:CDS
AAGAGGATAACAATATTAAC+AGG 0.409459 5_3:-12248363 Msa0799150:five_prime_UTR
TAAACACAATCTACAAATCC+TGG 0.409510 5_3:+12245827 None:intergenic
TTTGCCATTAGGAACTTTCC+AGG 0.409997 5_3:+12247903 None:intergenic
TTAATAAGAAGAAACCAATA+AGG 0.410161 5_3:-12247849 Msa0799150:intron
ATGCTGAAAGCGAACAGCTT+AGG 0.411570 5_3:-12243961 Msa0799150:three_prime_UTR
GCAAGCATTCATGCTGCAGC+TGG 0.411902 5_3:+12244583 None:intergenic
ACATATGCATCAATGGAGTT+TGG 0.415076 5_3:+12243380 None:intergenic
AAGCTTCTCTTCCCTTTCCA+TGG 0.415547 5_3:-12244189 Msa0799150:three_prime_UTR
GGATGCATGGCAGACCTTCT+GGG 0.415581 5_3:+12244376 None:intergenic
TCTTGGAATACAATGATTGA+TGG 0.417639 5_3:+12243761 None:intergenic
AGCTCGAGCCTGAACAAACT+TGG 0.418791 5_3:-12245320 Msa0799150:CDS
CACCACTAGCCAACTATTAG+TGG 0.418875 5_3:+12245054 None:intergenic
AGGGATGTGGTCACTTTCCC+AGG 0.421549 5_3:-12245845 Msa0799150:CDS
TGAGGGAAGCAAATCGAATA+GGG 0.423095 5_3:-12243726 Msa0799150:three_prime_UTR
TAGACATGTCATACATTTCT+CGG 0.424455 5_3:-12244741 Msa0799150:three_prime_UTR
ACTTCCTGGAAAGTTCCTAA+TGG 0.431111 5_3:-12247907 Msa0799150:CDS
TTCATGCTGCAGCTGGAGAA+TGG 0.431186 5_3:+12244590 None:intergenic
ATCGTTGGCTTTGTTAGGAC+AGG 0.434232 5_3:+12243869 None:intergenic
GTGAGGGAAGCAAATCGAAT+AGG 0.434677 5_3:-12243727 Msa0799150:three_prime_UTR
TGCTGAAAGCGAACAGCTTA+GGG 0.435009 5_3:-12243960 Msa0799150:three_prime_UTR
CTCGTGGGCAACACCATTTA+GGG 0.435349 5_3:-12244686 Msa0799150:three_prime_UTR
GGAGAAGTGAGAACAAGTTT+AGG 0.437956 5_3:+12247973 None:intergenic
AGGCAAATTTCCTTCACCTT+CGG 0.440945 5_3:+12247993 None:intergenic
TTGCCCACGAGTTCTTTGCT+GGG 0.441349 5_3:+12244698 None:intergenic
ACAGCTGTCCAAGTTTGTTC+AGG 0.442315 5_3:+12245312 None:intergenic
TCATGTGGAACACCATGATC+AGG 0.445132 5_3:+12243456 None:intergenic
TTCAACCAAATGCAGAAAAC+AGG 0.448456 5_3:+12244220 None:intergenic
CTGACGGCATGTAGTCATAC+AGG 0.448529 5_3:+12244277 None:intergenic
AGGGAAGAGAAGCTTTAGAT+TGG 0.449987 5_3:+12244197 None:intergenic
CCATGCTCAAATTATCAAAA+GGG 0.450262 5_3:+12243625 None:intergenic
TTCAGTTCCAGAGTTACAAC+AGG 0.450944 5_3:+12246970 None:intergenic
CTTACTAGTGTTCAGTAAGT+TGG 0.451788 5_3:+12244117 None:intergenic
TTTACTAAGCCACTAATAGT+TGG 0.455991 5_3:-12245063 Msa0799150:three_prime_UTR
GAGGCTGAGATATATTTGTT+TGG 0.457612 5_3:-12247940 Msa0799150:CDS
TATTGTCAACTTGTGTCTGA+TGG 0.458911 5_3:-12243342 Msa0799150:three_prime_UTR
AAATAATTGATAGGCCGGTT+CGG 0.458970 5_3:+12245129 None:intergenic
GACACGAAGCAGGGAGTTTG+TGG 0.459300 5_3:-12243669 Msa0799150:three_prime_UTR
AAGATGTTTGTGCAGGTGGC+AGG 0.460192 5_3:-12244488 Msa0799150:three_prime_UTR
CAAGAGATGACATTCTTCTC+TGG 0.462501 5_3:-12243836 Msa0799150:three_prime_UTR
GATTTGCAAGGAATTTGGAT+TGG 0.464230 5_3:-12247026 Msa0799150:CDS
CACTTTCACTGCAGTTCTGA+CGG 0.467510 5_3:+12244261 None:intergenic
GGTGAAGTAAAGCAGATTCA+TGG 0.472717 5_3:+12243299 None:intergenic
ATTGGTGGCTTTGCAATCCA+TGG 0.476981 5_3:+12244172 None:intergenic
TTGCAGCTACTCCAACTCAA+TGG 0.478532 5_3:+12243236 None:intergenic
GCAGACCTTCTGGGTCGCGC+AGG 0.479275 5_3:+12244385 None:intergenic
CCTAACAAAGCCAACGATCA+TGG 0.480433 5_3:-12243864 Msa0799150:three_prime_UTR
CTATTTCTTGGTTCTTAATG+GGG 0.481883 5_3:+12243210 None:intergenic
TGCAAGAAGATGATATGTTA+GGG 0.482692 5_3:+12244771 None:intergenic
CAACTTACTGAACACTAGTA+AGG 0.482883 5_3:-12244116 Msa0799150:three_prime_UTR
GTGGAAATGTGGTTCCGAAC+CGG 0.483577 5_3:-12245143 Msa0799150:three_prime_UTR
AGGAATTTGGATTGGACTGT+TGG 0.486366 5_3:-12247018 Msa0799150:CDS
ATTAACTACATATGCATCAA+TGG 0.487427 5_3:+12243373 None:intergenic
GCTGAGATATATTTGTTTGG+TGG 0.488082 5_3:-12247937 Msa0799150:CDS
AGAACCGTGGTCGATACAAC+AGG 0.489570 5_3:-12248188 Msa0799150:intron
AAACCTGTTATGGAACATTA+CGG 0.489880 5_3:+12244355 None:intergenic
AAGTTTGTTCAGGCTCGAGC+TGG 0.490832 5_3:+12245322 None:intergenic
CTTGTTCTCACTTCTCCAGC+TGG 0.493059 5_3:-12247967 Msa0799150:CDS
CATGCTTCCATTTGAAGATG+AGG 0.495158 5_3:+12245624 None:intergenic
CAGAGAAGAATGTCATCTCT+TGG 0.498603 5_3:+12243837 None:intergenic
TCATGCTGCAGCTGGAGAAT+GGG 0.499640 5_3:+12244591 None:intergenic
GAACATGATTTGAGAAGGAA+AGG 0.501593 5_3:-12243569 Msa0799150:three_prime_UTR
TAACTTACCCTATGCACGTA+TGG 0.502742 5_3:+12243403 None:intergenic
TGTTCGCTTTCAGCATGTGC+AGG 0.503994 5_3:+12243968 None:intergenic
GTGTCTTCTACAGCAAATGC+TGG 0.505455 5_3:+12243910 None:intergenic
GGGAAATCCTGTTGTAACTC+TGG 0.508439 5_3:-12246977 Msa0799150:CDS
GGCTTTGCAATCCATGGAAA+GGG 0.509415 5_3:+12244178 None:intergenic
ATTTCTCGGACATGTGGGTG+GGG 0.509589 5_3:-12244727 Msa0799150:three_prime_UTR
CATTTCTCGGACATGTGGGT+GGG 0.510807 5_3:-12244728 Msa0799150:three_prime_UTR
GTGGAATCCTCATCTTCAAA+TGG 0.511002 5_3:-12245631 Msa0799150:CDS
TGGTCCTGGTGCAATTCAGC+AGG 0.511929 5_3:-12247326 Msa0799150:intron
TTGCAGCTTGATAATGGCTT+GGG 0.512658 5_3:-12245785 Msa0799150:CDS
GATCCTAATAATCCAATTGA+GGG 0.513845 5_3:-12246371 Msa0799150:CDS
TACGTATAGTCGTGCTATGT+GGG 0.525395 5_3:-12246941 Msa0799150:CDS
TATACACAGGCTTCTGTAAG+TGG 0.527618 5_3:-12246443 Msa0799150:intron
AAATTGCATAGACACGAAGC+AGG 0.528261 5_3:-12243679 Msa0799150:three_prime_UTR
ATCTCAGCCTCACTACCAGC+TGG 0.528382 5_3:+12247952 None:intergenic
AGATCCTAATAATCCAATTG+AGG 0.529404 5_3:-12246372 Msa0799150:CDS
CAGACCTTCTGGGTCGCGCA+GGG 0.534698 5_3:+12244386 None:intergenic
TAATAGTTGGCTAGTGGTGA+GGG 0.539481 5_3:-12245050 Msa0799150:three_prime_UTR
TTACCCGAAAGTATGTGTGC+AGG 0.539592 5_3:+12246706 None:intergenic
GCAGTGAAAGTGAAGGAAGT+TGG 0.540369 5_3:-12244250 Msa0799150:three_prime_UTR
ATATGGACTGCAATAATTGG+TGG 0.541484 5_3:+12244157 None:intergenic
ATGTGCAGGTCTTGGTGCAT+TGG 0.545829 5_3:+12243982 None:intergenic
CTGCACAAACATCTTGAGCT+TGG 0.546334 5_3:+12244496 None:intergenic
CACTTCTCCAGCTGGTAGTG+AGG 0.546966 5_3:-12247959 Msa0799150:CDS
TCATACATTTCTCGGACATG+TGG 0.549365 5_3:-12244733 Msa0799150:three_prime_UTR
CATACAGGGCTAGTTGAAGA+AGG 0.550840 5_3:+12244292 None:intergenic
CAATTGAGGGTAGTGAAGAA+AGG 0.553382 5_3:-12246358 Msa0799150:intron
GCTCAAGATGTTTGTGCAGG+TGG 0.554250 5_3:-12244492 Msa0799150:three_prime_UTR
GGGAATATCCGAATTTCCGC+GGG 0.554408 5_3:-12248394 Msa0799150:five_prime_UTR
TGGCTTTGCAATCCATGGAA+AGG 0.557135 5_3:+12244177 None:intergenic
GTTGCAGCTTGATAATGGCT+TGG 0.558868 5_3:-12245786 Msa0799150:CDS
ACAATGTTACATATGTAATG+AGG 0.559901 5_3:+12244980 None:intergenic
CTAATAGTTGGCTAGTGGTG+AGG 0.561355 5_3:-12245051 Msa0799150:three_prime_UTR
CAGCCCCAGCAAAGAACTCG+TGG 0.563427 5_3:-12244702 Msa0799150:three_prime_UTR
AAAATTTATCTGGCGAGAGT+AGG 0.565092 5_3:+12244814 None:intergenic
ACATTTCTCGGACATGTGGG+TGG 0.565171 5_3:-12244729 Msa0799150:three_prime_UTR
TCTTGGACAACCATGATCGT+TGG 0.565685 5_3:+12243854 None:intergenic
ATTATACAGAAGATACATGT+TGG 0.565801 5_3:+12245088 None:intergenic
ATCTTCGTAATGCAGGGATG+TGG 0.567372 5_3:-12245858 Msa0799150:intron
CATGCTCAAATTATCAAAAG+GGG 0.567381 5_3:+12243626 None:intergenic
CAAGCTCAAGATGTTTGTGC+AGG 0.567522 5_3:-12244495 Msa0799150:three_prime_UTR
GACACAAGTTGACAATAAGC+AGG 0.569030 5_3:+12243348 None:intergenic
CCAAGAAACAATATCTCGTG+AGG 0.570769 5_3:-12243744 Msa0799150:three_prime_UTR
TTTAACAGCATGGATTTGCA+AGG 0.571252 5_3:-12247038 Msa0799150:intron
TGCTTGCCAAATGAATATAC+CGG 0.574218 5_3:-12244567 Msa0799150:three_prime_UTR
AAATGTAGCTTTGCATTGTG+TGG 0.577386 5_3:+12244901 None:intergenic
GTGCAGAACATGATTTGAGA+AGG 0.578813 5_3:-12243574 Msa0799150:three_prime_UTR
TGGTCTGCTCCCCATTGAGT+TGG 0.579605 5_3:-12243247 Msa0799150:three_prime_UTR
AAAATGTGGAAATGTAGAGA+TGG 0.581375 5_3:+12243790 None:intergenic
GTTTGAATATGCCCTGATCA+TGG 0.582702 5_3:-12243468 Msa0799150:three_prime_UTR
AAACCAAATGCTGCAATATG+GGG 0.583156 5_3:+12244451 None:intergenic
AACATGATTTGAGAAGGAAA+GGG 0.586327 5_3:-12243568 Msa0799150:three_prime_UTR
GTGTTCCACATGACAGTGTT+CGG 0.586703 5_3:-12243446 Msa0799150:three_prime_UTR
ATACGTATAGTCGTGCTATG+TGG 0.586796 5_3:-12246942 Msa0799150:CDS
AAACACAATCTACAAATCCT+GGG 0.586977 5_3:+12245828 None:intergenic
GCTGGTCAGATGCGGTGTTG+TGG 0.588359 5_3:-12245650 Msa0799150:CDS
ATTGATGGATATATAAAATG+TGG 0.588755 5_3:+12243776 None:intergenic
TACCCGAAAGTATGTGTGCA+GGG 0.589772 5_3:+12246707 None:intergenic
TGTTTGTGTTGAAAATGCTA+AGG 0.590805 5_3:-12245589 Msa0799150:intron
CACGGTTACTGATCATGCAA+TGG 0.591147 5_3:+12245278 None:intergenic
AGGGTGATAGTACTGCATCC+TGG 0.591218 5_3:-12244667 Msa0799150:three_prime_UTR
GTGCATTGGAGCAAGGCAAG+TGG 0.591540 5_3:+12243996 None:intergenic
ACCGCACGACAACCAAAAGC+AGG 0.594748 5_3:+12245164 None:intergenic
CATGTGGAACACCATGATCA+GGG 0.594774 5_3:+12243457 None:intergenic
GGTCTTGGTGCATTGGAGCA+AGG 0.595413 5_3:+12243989 None:intergenic
AGGGCTAGTTGAAGAAGGAA+AGG 0.598867 5_3:+12244297 None:intergenic
TGTTGTAACTCTGGAACTGA+AGG 0.600817 5_3:-12246968 Msa0799150:CDS
TGCCCACGAGTTCTTTGCTG+GGG 0.600883 5_3:+12244699 None:intergenic
TTCCGCGGGTTCGAGTCAAG+AGG 0.601857 5_3:-12248380 Msa0799150:five_prime_UTR
CAAACTGTGGAAAGCAATGT+GGG 0.602638 5_3:+12247347 None:intergenic
GTTGTCGTGCGGTGGAAATG+TGG 0.604969 5_3:-12245154 Msa0799150:three_prime_UTR
GTATCGACCACGGTTCTGAA+AGG 0.608253 5_3:+12248194 None:intergenic
ACAACCCTGCGCGACCCAGA+AGG 0.610824 5_3:-12244390 Msa0799150:three_prime_UTR
CCCATGTAGCTGGTCAGATG+CGG 0.613904 5_3:-12245658 Msa0799150:intron
TGGACCCTGATCATGACGGC+CGG 0.615568 5_3:+12244548 None:intergenic
TATACCGGCCGTCATGATCA+GGG 0.615693 5_3:-12244552 Msa0799150:three_prime_UTR
CCAAACTGTGGAAAGCAATG+TGG 0.616463 5_3:+12247346 None:intergenic
CATACCTGCTGAATTGCACC+AGG 0.622503 5_3:+12247322 None:intergenic
TAAGAGCACAACCCAAAACT+GGG 0.623332 5_3:-12244057 Msa0799150:three_prime_UTR
AGTAATCATGCTCTCAAACA+GGG 0.623519 5_3:-12244320 Msa0799150:three_prime_UTR
CAGAACTGCAGTGAAAGTGA+AGG 0.624088 5_3:-12244257 Msa0799150:three_prime_UTR
GTAAAAGTTACCGAAGGTGA+AGG 0.624136 5_3:-12248003 Msa0799150:CDS
GAGGGATTTGATAATTTGCG+AGG 0.625123 5_3:-12245032 Msa0799150:three_prime_UTR
TATGGAACATTACGGATGCA+TGG 0.630577 5_3:+12244363 None:intergenic
TGGGAATATCCGAATTTCCG+CGG 0.632474 5_3:-12248395 Msa0799150:five_prime_UTR
AGGGATTTGATAATTTGCGA+GGG 0.632749 5_3:-12245031 Msa0799150:three_prime_UTR
CAAGAAACAATATCTCGTGA+GGG 0.636849 5_3:-12243743 Msa0799150:three_prime_UTR
CATACATTTCTCGGACATGT+GGG 0.639227 5_3:-12244732 Msa0799150:three_prime_UTR
AGGGTTGTTGAAAGAAGCAA+AGG 0.640818 5_3:+12244405 None:intergenic
ATCCTCTTGACTCGAACCCG+CGG 0.640920 5_3:+12248378 None:intergenic
TAAGTGGTGCATCAGTTAAG+GGG 0.648460 5_3:-12246427 Msa0799150:CDS
AGCCACTAATAGTTGGCTAG+TGG 0.654669 5_3:-12245056 Msa0799150:three_prime_UTR
TTGGGAGTAAAAGTTACCGA+AGG 0.657529 5_3:-12248009 Msa0799150:CDS
ACAGTTACCTTTCAGAACCG+TGG 0.663805 5_3:-12248201 Msa0799150:CDS
AGCCCCAGCAAAGAACTCGT+GGG 0.664328 5_3:-12244701 Msa0799150:three_prime_UTR
GGGAAAGTGTAAGCATTGTG+AGG 0.669895 5_3:-12243548 Msa0799150:three_prime_UTR
TTAACCTGTTGTATCGACCA+CGG 0.670147 5_3:+12248184 None:intergenic
ATGGCTTCAATGGCATTCTG+TGG 0.671150 5_3:-12248231 Msa0799150:CDS
GTTCACCGAACACTGTCATG+TGG 0.671369 5_3:+12243441 None:intergenic
GATTTAATTATATCCAAACA+GGG 0.671483 5_3:-12244859 Msa0799150:three_prime_UTR
GAATTGGACCCTGATCATGA+CGG 0.672137 5_3:+12244544 None:intergenic
TGACGGCATGTAGTCATACA+GGG 0.678991 5_3:+12244278 None:intergenic
GGGATTTGATAATTTGCGAG+GGG 0.683254 5_3:-12245030 Msa0799150:three_prime_UTR
TTAATTATATCCAAACAGGG+TGG 0.685106 5_3:-12244856 Msa0799150:three_prime_UTR
ATAGACATGTATGTCAAATG+CGG 0.685781 5_3:+12244079 None:intergenic
AATTGCATAGACACGAAGCA+GGG 0.686791 5_3:-12243678 Msa0799150:three_prime_UTR
TGGTGATTCTGAGAATGTCG+AGG 0.688419 5_3:-12246998 Msa0799150:CDS
ATTGCACCAGGACCAAACTG+TGG 0.695286 5_3:+12247334 None:intergenic
ACATAGCAAATGTAGAACCA+CGG 0.703222 5_3:+12245260 None:intergenic
CATTGCATGATCAGTAACCG+TGG 0.704081 5_3:-12245277 Msa0799150:exon
GGTGATTCTGAGAATGTCGA+GGG 0.707768 5_3:-12246997 Msa0799150:CDS
GCAGCTACTCCAACTCAATG+GGG 0.716414 5_3:+12243238 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTATATTTATTATATA+TGG + chr5_3:12243264-12243283 None:intergenic 0.0%
!! AAATAAAGAAAAAACTACTT+TGG - chr5_3:12243567-12243586 Msa0799150:three_prime_UTR 15.0%
!! AATAAAGAAAAAACTACTTT+GGG - chr5_3:12243568-12243587 Msa0799150:three_prime_UTR 15.0%
!!! TATTACATTGTTATTTACAA+AGG - chr5_3:12243922-12243941 Msa0799150:three_prime_UTR 15.0%
!! AAGAAAATAACATTGAATAA+AGG + chr5_3:12244301-12244320 None:intergenic 15.0%
!! AATTCAATTACAAAAATTTG+AGG - chr5_3:12244362-12244381 Msa0799150:three_prime_UTR 15.0%
!!! TTGAATATTATTTTGACATT+TGG - chr5_3:12244949-12244968 Msa0799150:three_prime_UTR 15.0%
!! AGTTTACAAACTTTATAAAA+AGG - chr5_3:12246041-12246060 Msa0799150:intron 15.0%
!!! TATTTTGTTTTTACAAATGT+AGG - chr5_3:12247569-12247588 Msa0799150:intron 15.0%
!! GAAAAAACAAATACTATACT+TGG - chr5_3:12243295-12243314 Msa0799150:three_prime_UTR 20.0%
!! ATTTGGAAACAAAGAAAAAA+TGG - chr5_3:12243339-12243358 Msa0799150:three_prime_UTR 20.0%
!! ATTTGGAAGAGAAAAAAAAA+AGG + chr5_3:12243474-12243493 None:intergenic 20.0%
!! TGGTTTCTTCTTATTAAAAA+CGG + chr5_3:12243743-12243762 None:intergenic 20.0%
!! TTAATAAGAAGAAACCAATA+AGG - chr5_3:12243746-12243765 Msa0799150:three_prime_UTR 20.0%
!!! ACATTTTAAATATGAAGTGA+GGG - chr5_3:12243888-12243907 Msa0799150:three_prime_UTR 20.0%
!! ACAAAAATTTGAGGATTATT+TGG - chr5_3:12244371-12244390 Msa0799150:three_prime_UTR 20.0%
!! AGTTAAAAATACTGACAATA+AGG - chr5_3:12244847-12244866 Msa0799150:three_prime_UTR 20.0%
!! AATTTGAATGATCACTAAAT+AGG - chr5_3:12244911-12244930 Msa0799150:three_prime_UTR 20.0%
!! ATTTGAATGATCACTAAATA+GGG - chr5_3:12244912-12244931 Msa0799150:three_prime_UTR 20.0%
!! TCTTAAATTAAAACTTGACA+TGG - chr5_3:12245287-12245306 Msa0799150:exon 20.0%
!! TTCAAATTCATACAAAATGA+GGG + chr5_3:12245513-12245532 None:intergenic 20.0%
!! GTATTATTTCATTCATTTAG+TGG - chr5_3:12245542-12245561 Msa0799150:intron 20.0%
!!! TTTATCATTCAATGCAATTT+TGG + chr5_3:12245672-12245691 None:intergenic 20.0%
!! CAAGACAAAAAATAATTGAT+AGG + chr5_3:12246478-12246497 None:intergenic 20.0%
!! CTGTTTGGATATAATTAAAT+CGG + chr5_3:12246737-12246756 None:intergenic 20.0%
!! GATTTAATTATATCCAAACA+GGG - chr5_3:12246736-12246755 Msa0799150:CDS 20.0%
!!! ATTGATGGATATATAAAATG+TGG + chr5_3:12247822-12247841 None:intergenic 20.0%
! AAGAGGATAACAATATTAAC+AGG - chr5_3:12243232-12243251 Msa0799150:three_prime_UTR 25.0%
! GTTGTATTGTGATTGAAATT+TGG - chr5_3:12243322-12243341 Msa0799150:three_prime_UTR 25.0%
! TTACTACAAGCTAGAAAATT+TGG + chr5_3:12243491-12243510 None:intergenic 25.0%
! AAAGTAAGTAAGAACCTTAT+TGG + chr5_3:12243763-12243782 None:intergenic 25.0%
!! CACATTTTAAATATGAAGTG+AGG - chr5_3:12243887-12243906 Msa0799150:three_prime_UTR 25.0%
!!! GATACTGATTAATTTTCTTC+TGG - chr5_3:12244211-12244230 Msa0799150:three_prime_UTR 25.0%
!!! ATTCAATGTTATTTTCTTGC+AGG - chr5_3:12244303-12244322 Msa0799150:three_prime_UTR 25.0%
!!! ATTTGAGGATTATTTGGTTT+TGG - chr5_3:12244377-12244396 Msa0799150:three_prime_UTR 25.0%
!! CAACTTTTGTGCTTAATATT+TGG - chr5_3:12244452-12244471 Msa0799150:three_prime_UTR 25.0%
!!! GACTTGTTAAAATGTTTGTT+TGG - chr5_3:12244527-12244546 Msa0799150:three_prime_UTR 25.0%
! CATGAAATTACATCATGATT+TGG + chr5_3:12244774-12244793 None:intergenic 25.0%
! CAACTCATTCAAACAATAAT+TGG + chr5_3:12245048-12245067 None:intergenic 25.0%
! GTTGAAATTATTCAAATGCA+TGG - chr5_3:12245064-12245083 Msa0799150:three_prime_UTR 25.0%
!! ATCATTTTGTCATTATACAC+AGG - chr5_3:12245139-12245158 Msa0799150:three_prime_UTR 25.0%
! ATAAAAAGTTGTACTACCTA+TGG - chr5_3:12245391-12245410 Msa0799150:intron 25.0%
!! GATAATTTGAAATACTCCAT+AGG + chr5_3:12245410-12245429 None:intergenic 25.0%
! GTTCAAATTCATACAAAATG+AGG + chr5_3:12245514-12245533 None:intergenic 25.0%
!!! AATGCAATTTTGGTCTTATA+TGG + chr5_3:12245662-12245681 None:intergenic 25.0%
!!! CTATTTTTAATGCTTCAGAT+TGG - chr5_3:12246244-12246263 Msa0799150:intron 25.0%
! ACAAAAAATAATTGATAGGC+CGG + chr5_3:12246474-12246493 None:intergenic 25.0%
! ATTATACAGAAGATACATGT+TGG + chr5_3:12246510-12246529 None:intergenic 25.0%
! ACAATGTTACATATGTAATG+AGG + chr5_3:12246618-12246637 None:intergenic 25.0%
! CGATTTAATTATATCCAAAC+AGG - chr5_3:12246735-12246754 Msa0799150:CDS 25.0%
! GATGAGAATGAAAATTTATC+TGG + chr5_3:12246794-12246813 None:intergenic 25.0%
! AGAAGCCAGATAAAAAATAA+GGG + chr5_3:12246967-12246986 None:intergenic 25.0%
! TGGAAAAATTCTGATTGAAT+TGG + chr5_3:12247070-12247089 None:intergenic 25.0%
! TTATAACATGAAACCTGTTA+TGG + chr5_3:12247253-12247272 None:intergenic 25.0%
!! TATATATGGACTGCAATAAT+TGG + chr5_3:12247444-12247463 None:intergenic 25.0%
! AGAAGAAATGTGTCTATATA+TGG + chr5_3:12247458-12247477 None:intergenic 25.0%
!! ATAAAAATAGACCCAGTTTT+GGG + chr5_3:12247552-12247571 None:intergenic 25.0%
!! AATAAAAATAGACCCAGTTT+TGG + chr5_3:12247553-12247572 None:intergenic 25.0%
!!! CATAGCTTTAAAAATCTTGT+AGG - chr5_3:12247782-12247801 Msa0799150:intron 25.0%
! ATTAACTACATATGCATCAA+TGG + chr5_3:12248225-12248244 None:intergenic 25.0%
!! TCTATTTCTTGGTTCTTAAT+GGG + chr5_3:12248389-12248408 None:intergenic 25.0%
!! TTCTATTTCTTGGTTCTTAA+TGG + chr5_3:12248390-12248409 None:intergenic 25.0%
AAACAAAGAAAAAATGGCGA+TGG - chr5_3:12243345-12243364 Msa0799150:three_prime_UTR 30.0%
! GAAAGAAAACTATGGATTGA+TGG + chr5_3:12243444-12243463 None:intergenic 30.0%
!!! TTTTTATTTTTGCGATGCAG+TGG - chr5_3:12243523-12243542 Msa0799150:three_prime_UTR 30.0%
! TTTAAAATGTGTCTGACACA+TGG + chr5_3:12243878-12243897 None:intergenic 30.0%
TTAAGCTGTTTATCCAAACA+GGG + chr5_3:12243948-12243967 None:intergenic 30.0%
ATTAAGCTGTTTATCCAAAC+AGG + chr5_3:12243949-12243968 None:intergenic 30.0%
!!! GTTGTTTTAATAAGCTGTCT+TGG - chr5_3:12244042-12244061 Msa0799150:three_prime_UTR 30.0%
TAAACACTTGTGAGATTGTT+TGG + chr5_3:12244133-12244152 None:intergenic 30.0%
!!! TTAATTTTCTTCTGGAACAG+TGG - chr5_3:12244219-12244238 Msa0799150:three_prime_UTR 30.0%
CAGCTTTCATGCTTTATATA+AGG - chr5_3:12244681-12244700 Msa0799150:three_prime_UTR 30.0%
TGCTTTATATAAGGTTGTCA+AGG - chr5_3:12244690-12244709 Msa0799150:three_prime_UTR 30.0%
!! TTTCATGCTTTCATTTTTGC+AGG - chr5_3:12244787-12244806 Msa0799150:three_prime_UTR 30.0%
ACATTTGGTATTATGTTTGC+TGG - chr5_3:12244964-12244983 Msa0799150:three_prime_UTR 30.0%
AAAATCATCTGTACTTGGTT+AGG + chr5_3:12245022-12245041 None:intergenic 30.0%
TCAATTGGATTATTAGGATC+TGG + chr5_3:12245224-12245243 None:intergenic 30.0%
AGATCCTAATAATCCAATTG+AGG - chr5_3:12245223-12245242 Msa0799150:three_prime_UTR 30.0%
GATCCTAATAATCCAATTGA+GGG - chr5_3:12245224-12245243 Msa0799150:three_prime_UTR 30.0%
TCTGTAACATACTTTACTTC+TGG - chr5_3:12245260-12245279 Msa0799150:three_prime_UTR 30.0%
CTGTAACATACTTTACTTCT+GGG - chr5_3:12245261-12245280 Msa0799150:three_prime_UTR 30.0%
TTAAAACTTGACATGGTAAG+TGG - chr5_3:12245294-12245313 Msa0799150:CDS 30.0%
AAACACAATCTACAAATCCT+GGG + chr5_3:12245770-12245789 None:intergenic 30.0%
TAAACACAATCTACAAATCC+TGG + chr5_3:12245771-12245790 None:intergenic 30.0%
TGTTTGTGTTGAAAATGCTA+AGG - chr5_3:12246006-12246025 Msa0799150:intron 30.0%
TTCTATGTCCAAATAGCATT+TGG + chr5_3:12246393-12246412 None:intergenic 30.0%
TTTACTAAGCCACTAATAGT+TGG - chr5_3:12246532-12246551 Msa0799150:intron 30.0%
TTAATTATATCCAAACAGGG+TGG - chr5_3:12246739-12246758 Msa0799150:CDS 30.0%
TGCAAGAAGATGATATGTTA+GGG + chr5_3:12246827-12246846 None:intergenic 30.0%
TTGCAAGAAGATGATATGTT+AGG + chr5_3:12246828-12246847 None:intergenic 30.0%
TAGACATGTCATACATTTCT+CGG - chr5_3:12246854-12246873 Msa0799150:intron 30.0%
GAGAAGCCAGATAAAAAATA+AGG + chr5_3:12246968-12246987 None:intergenic 30.0%
AAAACCAAATGCTGCAATAT+GGG + chr5_3:12247148-12247167 None:intergenic 30.0%
TAAAACCAAATGCTGCAATA+TGG + chr5_3:12247149-12247168 None:intergenic 30.0%
!!! TATTGCAGCATTTGGTTTTA+TGG - chr5_3:12247149-12247168 Msa0799150:intron 30.0%
!!! ATTGCAGCATTTGGTTTTAT+GGG - chr5_3:12247150-12247169 Msa0799150:intron 30.0%
AAACCTGTTATGGAACATTA+CGG + chr5_3:12247243-12247262 None:intergenic 30.0%
! TAATTCCTGTTTTCTGCATT+TGG - chr5_3:12247370-12247389 Msa0799150:intron 30.0%
ATAGACATGTATGTCAAATG+CGG + chr5_3:12247519-12247538 None:intergenic 30.0%
! TATTTTATCAGGTTTGATGC+CGG - chr5_3:12247659-12247678 Msa0799150:intron 30.0%
AAAATGTGGAAATGTAGAGA+TGG + chr5_3:12247808-12247827 None:intergenic 30.0%
TCTTGGAATACAATGATTGA+TGG + chr5_3:12247837-12247856 None:intergenic 30.0%
! CAAATTATCAAAAGGGGTTT+TGG + chr5_3:12247966-12247985 None:intergenic 30.0%
CATGCTCAAATTATCAAAAG+GGG + chr5_3:12247972-12247991 None:intergenic 30.0%
CCATGCTCAAATTATCAAAA+GGG + chr5_3:12247973-12247992 None:intergenic 30.0%
TCCATGCTCAAATTATCAAA+AGG + chr5_3:12247974-12247993 None:intergenic 30.0%
AACATGATTTGAGAAGGAAA+GGG - chr5_3:12248027-12248046 Msa0799150:CDS 30.0%
TACAAAAACAATGCTTCTTC+TGG - chr5_3:12248095-12248114 Msa0799150:intron 30.0%
ACAAAAACAATGCTTCTTCT+GGG - chr5_3:12248096-12248115 Msa0799150:intron 30.0%
CATGGTCAATTGTTGAAAAA+AGG + chr5_3:12248281-12248300 None:intergenic 30.0%
TTGGAGAGATGTTCAAATAT+AGG + chr5_3:12248320-12248339 None:intergenic 30.0%
ACATCTCTCCAATAAAAACA+TGG - chr5_3:12248328-12248347 Msa0799150:five_prime_UTR 30.0%
! CTATTTCTTGGTTCTTAATG+GGG + chr5_3:12248388-12248407 None:intergenic 30.0%
GCTGAAGTGAAAGAAAACTA+TGG + chr5_3:12243452-12243471 None:intergenic 35.0%
GAGGCTGAGATATATTTGTT+TGG - chr5_3:12243655-12243674 Msa0799150:three_prime_UTR 35.0%
GCTGAGATATATTTGTTTGG+TGG - chr5_3:12243658-12243677 Msa0799150:three_prime_UTR 35.0%
AAAAGAAGGTCTTTGCCATT+AGG + chr5_3:12243706-12243725 None:intergenic 35.0%
TTCTTATTAAAAACGGCGTC+AGG + chr5_3:12243736-12243755 None:intergenic 35.0%
! ATCTGTGTCACTATTATGTC+TGG + chr5_3:12243836-12243855 None:intergenic 35.0%
TTATTTACAAAGGCCCTGTT+TGG - chr5_3:12243932-12243951 Msa0799150:three_prime_UTR 35.0%
AATCTCACAAGTGTTTATGC+TGG - chr5_3:12244136-12244155 Msa0799150:three_prime_UTR 35.0%
TCAAATGAACCAATCCAAAC+AGG - chr5_3:12244168-12244187 Msa0799150:three_prime_UTR 35.0%
ATCCAAGAGATCCCAAATTA+GGG + chr5_3:12244194-12244213 None:intergenic 35.0%
TATCCAAGAGATCCCAAATT+AGG + chr5_3:12244195-12244214 None:intergenic 35.0%
TGGTTGAGTATTTAACAGCA+TGG - chr5_3:12244547-12244566 Msa0799150:three_prime_UTR 35.0%
TTTAACAGCATGGATTTGCA+AGG - chr5_3:12244557-12244576 Msa0799150:three_prime_UTR 35.0%
GATTTGCAAGGAATTTGGAT+TGG - chr5_3:12244569-12244588 Msa0799150:three_prime_UTR 35.0%
! ATGTTTGCTGGATATCTGAA+CGG - chr5_3:12244976-12244995 Msa0799150:three_prime_UTR 35.0%
GGATGAAAATCATCTGTACT+TGG + chr5_3:12245027-12245046 None:intergenic 35.0%
CTACCCTCAATTGGATTATT+AGG + chr5_3:12245230-12245249 None:intergenic 35.0%
TAAGTGGTAACTACTTGTAC+AGG - chr5_3:12245310-12245329 Msa0799150:CDS 35.0%
! CAACTTTTTATCCAACCACT+TGG + chr5_3:12245382-12245401 None:intergenic 35.0%
GCACATGAAAATGCATGTAT+GGG + chr5_3:12245451-12245470 None:intergenic 35.0%
TGCACATGAAAATGCATGTA+TGG + chr5_3:12245452-12245471 None:intergenic 35.0%
CAAAATGAGGGAGATAAAGA+AGG + chr5_3:12245501-12245520 None:intergenic 35.0%
AAAGTGTAAGCACTTGACTT+GGG + chr5_3:12245906-12245925 None:intergenic 35.0%
GGCGATTGAATTCAAATAAC+TGG - chr5_3:12246122-12246141 Msa0799150:intron 35.0%
TCATGCAGTGTTATGATATC+TGG - chr5_3:12246173-12246192 Msa0799150:intron 35.0%
ACATAGCAAATGTAGAACCA+CGG + chr5_3:12246338-12246357 None:intergenic 35.0%
!! GGTTCTACATTTGCTATGTT+TGG - chr5_3:12246339-12246358 Msa0799150:intron 35.0%
! AAGCTACAATTTCCTGCTTT+TGG - chr5_3:12246419-12246438 Msa0799150:CDS 35.0%
AAATAATTGATAGGCCGGTT+CGG + chr5_3:12246469-12246488 None:intergenic 35.0%
! AGGGATTTGATAATTTGCGA+GGG - chr5_3:12246564-12246583 Msa0799150:intron 35.0%
! AAATGTAGCTTTGCATTGTG+TGG + chr5_3:12246697-12246716 None:intergenic 35.0%
AAAATTTATCTGGCGAGAGT+AGG + chr5_3:12246784-12246803 None:intergenic 35.0%
!!! GCAGACCCTTATTTTTTATC+TGG - chr5_3:12246959-12246978 Msa0799150:CDS 35.0%
TGCTTGCCAAATGAATATAC+CGG - chr5_3:12247028-12247047 Msa0799150:CDS 35.0%
AAACCAAATGCTGCAATATG+GGG + chr5_3:12247147-12247166 None:intergenic 35.0%
AGTAATCATGCTCTCAAACA+GGG - chr5_3:12247275-12247294 Msa0799150:intron 35.0%
TTCAACCAAATGCAGAAAAC+AGG + chr5_3:12247378-12247397 None:intergenic 35.0%
! ATATGGACTGCAATAATTGG+TGG + chr5_3:12247441-12247460 None:intergenic 35.0%
CTTACTAGTGTTCAGTAAGT+TGG + chr5_3:12247481-12247500 None:intergenic 35.0%
CAACTTACTGAACACTAGTA+AGG - chr5_3:12247479-12247498 Msa0799150:intron 35.0%
!! CAGCTTAGGGTTATTTTATC+AGG - chr5_3:12247648-12247667 Msa0799150:intron 35.0%
CAAGAAACAATATCTCGTGA+GGG - chr5_3:12247852-12247871 Msa0799150:CDS 35.0%
!! CCCTTTTGATAATTTGAGCA+TGG - chr5_3:12247970-12247989 Msa0799150:CDS 35.0%
GAACATGATTTGAGAAGGAA+AGG - chr5_3:12248026-12248045 Msa0799150:CDS 35.0%
ATCAAAAACCATACGTGCAT+AGG - chr5_3:12248184-12248203 Msa0799150:intron 35.0%
TCAAAAACCATACGTGCATA+GGG - chr5_3:12248185-12248204 Msa0799150:intron 35.0%
ACATATGCATCAATGGAGTT+TGG + chr5_3:12248218-12248237 None:intergenic 35.0%
TATTGTCAACTTGTGTCTGA+TGG - chr5_3:12248253-12248272 Msa0799150:exon 35.0%
AAAAATGGCGATGGCTTCAA+TGG - chr5_3:12243354-12243373 Msa0799150:three_prime_UTR 40.0%
! TTAACCTGTTGTATCGACCA+CGG + chr5_3:12243414-12243433 None:intergenic 40.0%
TGGAATTGCATTTGCGAGTT+TGG - chr5_3:12243543-12243562 Msa0799150:three_prime_UTR 40.0%
GGAATTGCATTTGCGAGTTT+GGG - chr5_3:12243544-12243563 Msa0799150:three_prime_UTR 40.0%
TTGGGAGTAAAAGTTACCGA+AGG - chr5_3:12243586-12243605 Msa0799150:three_prime_UTR 40.0%
GTAAAAGTTACCGAAGGTGA+AGG - chr5_3:12243592-12243611 Msa0799150:three_prime_UTR 40.0%
AGGCAAATTTCCTTCACCTT+CGG + chr5_3:12243605-12243624 None:intergenic 40.0%
GGAGAAGTGAGAACAAGTTT+AGG + chr5_3:12243625-12243644 None:intergenic 40.0%
ACTTCCTGGAAAGTTCCTAA+TGG - chr5_3:12243688-12243707 Msa0799150:three_prime_UTR 40.0%
TTTGCCATTAGGAACTTTCC+AGG + chr5_3:12243695-12243714 None:intergenic 40.0%
AAATTAGGGCCTGTTTGGAT+TGG + chr5_3:12244180-12244199 None:intergenic 40.0%
AATCCAAACAGGCCCTAATT+TGG - chr5_3:12244179-12244198 Msa0799150:three_prime_UTR 40.0%
ATCCAAACAGGCCCTAATTT+GGG - chr5_3:12244180-12244199 Msa0799150:three_prime_UTR 40.0%
!!! ATTTTCTTCTGGAACAGTGG+AGG - chr5_3:12244222-12244241 Msa0799150:three_prime_UTR 40.0%
CAAACTGTGGAAAGCAATGT+GGG + chr5_3:12244251-12244270 None:intergenic 40.0%
GCATGGATTTGCAAGGAATT+TGG - chr5_3:12244564-12244583 Msa0799150:three_prime_UTR 40.0%
! AGGAATTTGGATTGGACTGT+TGG - chr5_3:12244577-12244596 Msa0799150:three_prime_UTR 40.0%
TTCAGTTCCAGAGTTACAAC+AGG + chr5_3:12244628-12244647 None:intergenic 40.0%
!! TGTTGTAACTCTGGAACTGA+AGG - chr5_3:12244627-12244646 Msa0799150:three_prime_UTR 40.0%
ATACGTATAGTCGTGCTATG+TGG - chr5_3:12244653-12244672 Msa0799150:three_prime_UTR 40.0%
TACGTATAGTCGTGCTATGT+GGG - chr5_3:12244654-12244673 Msa0799150:three_prime_UTR 40.0%
TATACACAGGCTTCTGTAAG+TGG - chr5_3:12245152-12245171 Msa0799150:three_prime_UTR 40.0%
TGTAAGTGGTGCATCAGTTA+AGG - chr5_3:12245166-12245185 Msa0799150:three_prime_UTR 40.0%
GTAAGTGGTGCATCAGTTAA+GGG - chr5_3:12245167-12245186 Msa0799150:three_prime_UTR 40.0%
TAAGTGGTGCATCAGTTAAG+GGG - chr5_3:12245168-12245187 Msa0799150:three_prime_UTR 40.0%
GCATCAGTTAAGGGGTTAAA+AGG - chr5_3:12245176-12245195 Msa0799150:three_prime_UTR 40.0%
CTTTCTTCACTACCCTCAAT+TGG + chr5_3:12245239-12245258 None:intergenic 40.0%
CAATTGAGGGTAGTGAAGAA+AGG - chr5_3:12245237-12245256 Msa0799150:three_prime_UTR 40.0%
TTTATCCAACCACTTGGCTA+AGG + chr5_3:12245376-12245395 None:intergenic 40.0%
ATGAGGGAGATAAAGAAGGT+AGG + chr5_3:12245497-12245516 None:intergenic 40.0%
ATAGACCATCTTCGTAATGC+AGG - chr5_3:12245730-12245749 Msa0799150:intron 40.0%
TAGACCATCTTCGTAATGCA+GGG - chr5_3:12245731-12245750 Msa0799150:intron 40.0%
GATGAGTTGCAGCTTGATAA+TGG - chr5_3:12245804-12245823 Msa0799150:CDS 40.0%
!! TTGCAGCTTGATAATGGCTT+GGG - chr5_3:12245810-12245829 Msa0799150:CDS 40.0%
! GAAAGTGTAAGCACTTGACT+TGG + chr5_3:12245907-12245926 None:intergenic 40.0%
GTGGAATCCTCATCTTCAAA+TGG - chr5_3:12245964-12245983 Msa0799150:intron 40.0%
CATGCTTCCATTTGAAGATG+AGG + chr5_3:12245974-12245993 None:intergenic 40.0%
TGACTACAACGTCAACATGA+TGG - chr5_3:12246101-12246120 Msa0799150:intron 40.0%
TCTCGCTTCCAAATGCTATT+TGG - chr5_3:12246382-12246401 Msa0799150:CDS 40.0%
TAATAGTTGGCTAGTGGTGA+GGG - chr5_3:12246545-12246564 Msa0799150:intron 40.0%
! GAGGGATTTGATAATTTGCG+AGG - chr5_3:12246563-12246582 Msa0799150:intron 40.0%
! GGGATTTGATAATTTGCGAG+GGG - chr5_3:12246565-12246584 Msa0799150:intron 40.0%
! TAGTAGTTTTCCACCCTGTT+TGG + chr5_3:12246752-12246771 None:intergenic 40.0%
TCATACATTTCTCGGACATG+TGG - chr5_3:12246862-12246881 Msa0799150:intron 40.0%
CATACATTTCTCGGACATGT+GGG - chr5_3:12246863-12246882 Msa0799150:intron 40.0%
TGCAGTACTATCACCCTAAA+TGG + chr5_3:12246925-12246944 None:intergenic 40.0%
!!! AGCATTTGGTTTTATGGGCA+TGG - chr5_3:12247155-12247174 Msa0799150:intron 40.0%
AGGGTTGTTGAAAGAAGCAA+AGG + chr5_3:12247193-12247212 None:intergenic 40.0%
TATGGAACATTACGGATGCA+TGG + chr5_3:12247235-12247254 None:intergenic 40.0%
CATCCGTAATGTTCCATAAC+AGG - chr5_3:12247237-12247256 Msa0799150:intron 40.0%
CAGTAATCATGCTCTCAAAC+AGG - chr5_3:12247274-12247293 Msa0799150:intron 40.0%
!! AGGGAAGAGAAGCTTTAGAT+TGG + chr5_3:12247401-12247420 None:intergenic 40.0%
! ATAAGAGCACAACCCAAAAC+TGG - chr5_3:12247537-12247556 Msa0799150:intron 40.0%
! TAAGAGCACAACCCAAAACT+GGG - chr5_3:12247538-12247557 Msa0799150:intron 40.0%
CAGAGAAGAATGTCATCTCT+TGG + chr5_3:12247761-12247780 None:intergenic 40.0%
CAAGAGATGACATTCTTCTC+TGG - chr5_3:12247759-12247778 Msa0799150:intron 40.0%
! CCTCACGAGATATTGTTTCT+TGG + chr5_3:12247854-12247873 None:intergenic 40.0%
CCAAGAAACAATATCTCGTG+AGG - chr5_3:12247851-12247870 Msa0799150:CDS 40.0%
TGAGGGAAGCAAATCGAATA+GGG - chr5_3:12247869-12247888 Msa0799150:CDS 40.0%
CTTCGTGTCTATGCAATTTC+AGG + chr5_3:12247915-12247934 None:intergenic 40.0%
AAATTGCATAGACACGAAGC+AGG - chr5_3:12247916-12247935 Msa0799150:CDS 40.0%
AATTGCATAGACACGAAGCA+GGG - chr5_3:12247917-12247936 Msa0799150:CDS 40.0%
GTGCAGAACATGATTTGAGA+AGG - chr5_3:12248021-12248040 Msa0799150:CDS 40.0%
GTTTGAATATGCCCTGATCA+TGG - chr5_3:12248127-12248146 Msa0799150:intron 40.0%
TAACTTACCCTATGCACGTA+TGG + chr5_3:12248195-12248214 None:intergenic 40.0%
! GACACAAGTTGACAATAAGC+AGG + chr5_3:12248250-12248269 None:intergenic 40.0%
GGTGAAGTAAAGCAGATTCA+TGG + chr5_3:12248299-12248318 None:intergenic 40.0%
!! GGAGCAGACCATGTTTTTAT+TGG + chr5_3:12248339-12248358 None:intergenic 40.0%
ATGGCTTCAATGGCATTCTG+TGG - chr5_3:12243364-12243383 Msa0799150:three_prime_UTR 45.0%
ACAGTTACCTTTCAGAACCG+TGG - chr5_3:12243394-12243413 Msa0799150:three_prime_UTR 45.0%
! TTGGTGGTTGCATTACTTCC+TGG - chr5_3:12243674-12243693 Msa0799150:three_prime_UTR 45.0%
CGTCAGGACGAACAAAAAGA+AGG + chr5_3:12243720-12243739 None:intergenic 45.0%
ATCCCAAATTAGGGCCTGTT+TGG + chr5_3:12244185-12244204 None:intergenic 45.0%
CCAAACTGTGGAAAGCAATG+TGG + chr5_3:12244252-12244271 None:intergenic 45.0%
CCACATTGCTTTCCACAGTT+TGG - chr5_3:12244249-12244268 Msa0799150:three_prime_UTR 45.0%
! TGGTGATTCTGAGAATGTCG+AGG - chr5_3:12244597-12244616 Msa0799150:three_prime_UTR 45.0%
! GGTGATTCTGAGAATGTCGA+GGG - chr5_3:12244598-12244617 Msa0799150:three_prime_UTR 45.0%
GGGAAATCCTGTTGTAACTC+TGG - chr5_3:12244618-12244637 Msa0799150:three_prime_UTR 45.0%
! TACCCGAAAGTATGTGTGCA+GGG + chr5_3:12244891-12244910 None:intergenic 45.0%
! TTACCCGAAAGTATGTGTGC+AGG + chr5_3:12244892-12244911 None:intergenic 45.0%
AACCACTTGGCTAAGGCTAA+GGG + chr5_3:12245369-12245388 None:intergenic 45.0%
ACATCCCTGCATTACGAAGA+TGG + chr5_3:12245738-12245757 None:intergenic 45.0%
ATCTTCGTAATGCAGGGATG+TGG - chr5_3:12245737-12245756 Msa0799150:intron 45.0%
!! GTTGCAGCTTGATAATGGCT+TGG - chr5_3:12245809-12245828 Msa0799150:CDS 45.0%
! ACAGCTGTCCAAGTTTGTTC+AGG + chr5_3:12246286-12246305 None:intergenic 45.0%
CACGGTTACTGATCATGCAA+TGG + chr5_3:12246320-12246339 None:intergenic 45.0%
CATTGCATGATCAGTAACCG+TGG - chr5_3:12246318-12246337 Msa0799150:intron 45.0%
AGCCACTAATAGTTGGCTAG+TGG - chr5_3:12246539-12246558 Msa0799150:intron 45.0%
CACCACTAGCCAACTATTAG+TGG + chr5_3:12246544-12246563 None:intergenic 45.0%
CTAATAGTTGGCTAGTGGTG+AGG - chr5_3:12246544-12246563 Msa0799150:intron 45.0%
AAGGGTCTGCTAAATCTTCC+AGG + chr5_3:12246949-12246968 None:intergenic 45.0%
TGACGGCCGGTATATTCATT+TGG + chr5_3:12247037-12247056 None:intergenic 45.0%
GAATTGGACCCTGATCATGA+CGG + chr5_3:12247054-12247073 None:intergenic 45.0%
CTTGAGCTTGGCAAAGAGAT+TGG + chr5_3:12247090-12247109 None:intergenic 45.0%
CTGCACAAACATCTTGAGCT+TGG + chr5_3:12247102-12247121 None:intergenic 45.0%
CAAGCTCAAGATGTTTGTGC+AGG - chr5_3:12247100-12247119 Msa0799150:intron 45.0%
GATCCCCATATTGCAGCATT+TGG - chr5_3:12247141-12247160 Msa0799150:intron 45.0%
!! AGGGCTAGTTGAAGAAGGAA+AGG + chr5_3:12247301-12247320 None:intergenic 45.0%
!! CATACAGGGCTAGTTGAAGA+AGG + chr5_3:12247306-12247325 None:intergenic 45.0%
TGACGGCATGTAGTCATACA+GGG + chr5_3:12247320-12247339 None:intergenic 45.0%
! CACTTTCACTGCAGTTCTGA+CGG + chr5_3:12247337-12247356 None:intergenic 45.0%
CAGAACTGCAGTGAAAGTGA+AGG - chr5_3:12247338-12247357 Msa0799150:CDS 45.0%
GCAGTGAAAGTGAAGGAAGT+TGG - chr5_3:12247345-12247364 Msa0799150:CDS 45.0%
AAGCTTCTCTTCCCTTTCCA+TGG - chr5_3:12247406-12247425 Msa0799150:intron 45.0%
GGCTTTGCAATCCATGGAAA+GGG + chr5_3:12247420-12247439 None:intergenic 45.0%
! TGGCTTTGCAATCCATGGAA+AGG + chr5_3:12247421-12247440 None:intergenic 45.0%
! ATTGGTGGCTTTGCAATCCA+TGG + chr5_3:12247426-12247445 None:intergenic 45.0%
ATGCTGAAAGCGAACAGCTT+AGG - chr5_3:12247634-12247653 Msa0799150:intron 45.0%
TGCTGAAAGCGAACAGCTTA+GGG - chr5_3:12247635-12247654 Msa0799150:intron 45.0%
GTGTCTTCTACAGCAAATGC+TGG + chr5_3:12247688-12247707 None:intergenic 45.0%
!! ATCGTTGGCTTTGTTAGGAC+AGG + chr5_3:12247729-12247748 None:intergenic 45.0%
!! CCATGATCGTTGGCTTTGTT+AGG + chr5_3:12247734-12247753 None:intergenic 45.0%
CCTAACAAAGCCAACGATCA+TGG - chr5_3:12247731-12247750 Msa0799150:intron 45.0%
TCTTGGACAACCATGATCGT+TGG + chr5_3:12247744-12247763 None:intergenic 45.0%
GTGAGGGAAGCAAATCGAAT+AGG - chr5_3:12247868-12247887 Msa0799150:CDS 45.0%
!!! CAAAAGGGGTTTTGGTTCAG+AGG + chr5_3:12247958-12247977 None:intergenic 45.0%
! GGGAAAGTGTAAGCATTGTG+AGG - chr5_3:12248047-12248066 Msa0799150:CDS 45.0%
CATGTGGAACACCATGATCA+GGG + chr5_3:12248141-12248160 None:intergenic 45.0%
TCATGTGGAACACCATGATC+AGG + chr5_3:12248142-12248161 None:intergenic 45.0%
GTGTTCCACATGACAGTGTT+CGG - chr5_3:12248149-12248168 Msa0799150:intron 45.0%
TGCAGCTACTCCAACTCAAT+GGG + chr5_3:12248361-12248380 None:intergenic 45.0%
TTGCAGCTACTCCAACTCAA+TGG + chr5_3:12248362-12248381 None:intergenic 45.0%
!! GTATCGACCACGGTTCTGAA+AGG + chr5_3:12243404-12243423 None:intergenic 50.0%
AGAACCGTGGTCGATACAAC+AGG - chr5_3:12243407-12243426 Msa0799150:three_prime_UTR 50.0%
CTTGTTCTCACTTCTCCAGC+TGG - chr5_3:12243628-12243647 Msa0799150:three_prime_UTR 50.0%
TCTGGTGTTCGTGTCAGTGT+CGG + chr5_3:12243818-12243837 None:intergenic 50.0%
! GGCCCTAATTTGGGATCTCT+TGG - chr5_3:12244189-12244208 Msa0799150:three_prime_UTR 50.0%
TGCTTTCCACAGTTTGGTCC+TGG - chr5_3:12244255-12244274 Msa0799150:three_prime_UTR 50.0%
ATTGCACCAGGACCAAACTG+TGG + chr5_3:12244264-12244283 None:intergenic 50.0%
CATACCTGCTGAATTGCACC+AGG + chr5_3:12244276-12244295 None:intergenic 50.0%
CTGCCCTGCACACATACTTT+CGG - chr5_3:12244885-12244904 Msa0799150:three_prime_UTR 50.0%
TGCCCTGCACACATACTTTC+GGG - chr5_3:12244886-12244905 Msa0799150:three_prime_UTR 50.0%
ACTTGGCTAAGGCTAAGGGA+AGG + chr5_3:12245365-12245384 None:intergenic 50.0%
!! TTCCCTTAGCCTTAGCCAAG+TGG - chr5_3:12245364-12245383 Msa0799150:intron 50.0%
CAACCACTTGGCTAAGGCTA+AGG + chr5_3:12245370-12245389 None:intergenic 50.0%
!! CTTAGCCTTAGCCAAGTGGT+TGG - chr5_3:12245368-12245387 Msa0799150:intron 50.0%
TTGCCTCTTACCCATGTAGC+TGG - chr5_3:12245927-12245946 Msa0799150:intron 50.0%
TGACCAGCTACATGGGTAAG+AGG + chr5_3:12245933-12245952 None:intergenic 50.0%
GAACAGTGCACAGTCTAGCA+GGG + chr5_3:12246080-12246099 None:intergenic 50.0%
AGAACAGTGCACAGTCTAGC+AGG + chr5_3:12246081-12246100 None:intergenic 50.0%
! AAGTTTGTTCAGGCTCGAGC+TGG + chr5_3:12246276-12246295 None:intergenic 50.0%
AGCTCGAGCCTGAACAAACT+TGG - chr5_3:12246275-12246294 Msa0799150:intron 50.0%
!! TCCTGCTTTTGGTTGTCGTG+CGG - chr5_3:12246430-12246449 Msa0799150:CDS 50.0%
GTGGAAATGTGGTTCCGAAC+CGG - chr5_3:12246452-12246471 Msa0799150:intron 50.0%
ACATTTCTCGGACATGTGGG+TGG - chr5_3:12246866-12246885 Msa0799150:intron 50.0%
CATTTCTCGGACATGTGGGT+GGG - chr5_3:12246867-12246886 Msa0799150:intron 50.0%
ATTTCTCGGACATGTGGGTG+GGG - chr5_3:12246868-12246887 Msa0799150:intron 50.0%
TTGCCCACGAGTTCTTTGCT+GGG + chr5_3:12246900-12246919 None:intergenic 50.0%
ACTCGTGGGCAACACCATTT+AGG - chr5_3:12246908-12246927 Msa0799150:intron 50.0%
CTCGTGGGCAACACCATTTA+GGG - chr5_3:12246909-12246928 Msa0799150:intron 50.0%
AGGGTGATAGTACTGCATCC+TGG - chr5_3:12246928-12246947 Msa0799150:CDS 50.0%
TCATGCTGCAGCTGGAGAAT+GGG + chr5_3:12247007-12247026 None:intergenic 50.0%
TTCATGCTGCAGCTGGAGAA+TGG + chr5_3:12247008-12247027 None:intergenic 50.0%
ATATACCGGCCGTCATGATC+AGG - chr5_3:12247042-12247061 Msa0799150:intron 50.0%
TATACCGGCCGTCATGATCA+GGG - chr5_3:12247043-12247062 Msa0799150:intron 50.0%
GCTCAAGATGTTTGTGCAGG+TGG - chr5_3:12247103-12247122 Msa0799150:intron 50.0%
AAGATGTTTGTGCAGGTGGC+AGG - chr5_3:12247107-12247126 Msa0799150:intron 50.0%
CTGACGGCATGTAGTCATAC+AGG + chr5_3:12247321-12247340 None:intergenic 50.0%
! ATGTGCAGGTCTTGGTGCAT+TGG + chr5_3:12247616-12247635 None:intergenic 50.0%
CTTTCAGCATGTGCAGGTCT+TGG + chr5_3:12247624-12247643 None:intergenic 50.0%
TGTTCGCTTTCAGCATGTGC+AGG + chr5_3:12247630-12247649 None:intergenic 50.0%
! CTACAGCAAATGCTGGTTGC+CGG + chr5_3:12247681-12247700 None:intergenic 50.0%
GTTCACCGAACACTGTCATG+TGG + chr5_3:12248157-12248176 None:intergenic 50.0%
GCAGCTACTCCAACTCAATG+GGG + chr5_3:12248360-12248379 None:intergenic 50.0%
GACTCGAACCCGCGGAAATT+CGG + chr5_3:12243212-12243231 None:intergenic 55.0%
! ATCCTCTTGACTCGAACCCG+CGG + chr5_3:12243220-12243239 None:intergenic 55.0%
! CACTTCTCCAGCTGGTAGTG+AGG - chr5_3:12243636-12243655 Msa0799150:three_prime_UTR 55.0%
ATCTCAGCCTCACTACCAGC+TGG + chr5_3:12243646-12243665 None:intergenic 55.0%
TGGTCCTGGTGCAATTCAGC+AGG - chr5_3:12244269-12244288 Msa0799150:three_prime_UTR 55.0%
! AGGGATGTGGTCACTTTCCC+AGG - chr5_3:12245750-12245769 Msa0799150:intron 55.0%
CCGCATCTGACCAGCTACAT+GGG + chr5_3:12245940-12245959 None:intergenic 55.0%
CCCATGTAGCTGGTCAGATG+CGG - chr5_3:12245937-12245956 Msa0799150:intron 55.0%
ACCGCATCTGACCAGCTACA+TGG + chr5_3:12245941-12245960 None:intergenic 55.0%
ACCGCACGACAACCAAAAGC+AGG + chr5_3:12246434-12246453 None:intergenic 55.0%
!! TGCTTTTGGTTGTCGTGCGG+TGG - chr5_3:12246433-12246452 Msa0799150:CDS 55.0%
GTTGTCGTGCGGTGGAAATG+TGG - chr5_3:12246441-12246460 Msa0799150:intron 55.0%
AGCCCCAGCAAAGAACTCGT+GGG - chr5_3:12246894-12246913 Msa0799150:intron 55.0%
TGCCCACGAGTTCTTTGCTG+GGG + chr5_3:12246899-12246918 None:intergenic 55.0%
GTTGCCCACGAGTTCTTTGC+TGG + chr5_3:12246901-12246920 None:intergenic 55.0%
GCAAGCATTCATGCTGCAGC+TGG + chr5_3:12247015-12247034 None:intergenic 55.0%
GGATGCATGGCAGACCTTCT+GGG + chr5_3:12247222-12247241 None:intergenic 55.0%
GTGCATTGGAGCAAGGCAAG+TGG + chr5_3:12247602-12247621 None:intergenic 55.0%
! GGTCTTGGTGCATTGGAGCA+AGG + chr5_3:12247609-12247628 None:intergenic 55.0%
GACACGAAGCAGGGAGTTTG+TGG - chr5_3:12247926-12247945 Msa0799150:CDS 55.0%
TGGTCTGCTCCCCATTGAGT+TGG - chr5_3:12248348-12248367 Msa0799150:five_prime_UTR 55.0%
TTCCGCGGGTTCGAGTCAAG+AGG - chr5_3:12243215-12243234 Msa0799150:three_prime_UTR 60.0%
! GCTGGTCAGATGCGGTGTTG+TGG - chr5_3:12245945-12245964 Msa0799150:intron 60.0%
CAGCCCCAGCAAAGAACTCG+TGG - chr5_3:12246893-12246912 Msa0799150:intron 60.0%
TGGACCCTGATCATGACGGC+CGG + chr5_3:12247050-12247069 None:intergenic 60.0%
CGGATGCATGGCAGACCTTC+TGG + chr5_3:12247223-12247242 None:intergenic 60.0%
ACAACCCTGCGCGACCCAGA+AGG - chr5_3:12247205-12247224 Msa0799150:intron 65.0%
CAGACCTTCTGGGTCGCGCA+GGG + chr5_3:12247212-12247231 None:intergenic 65.0%
GCAGACCTTCTGGGTCGCGC+AGG + chr5_3:12247213-12247232 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 12243202 12248415 12243202 ID=Msa0799150;Name=Msa0799150
chr5_3 mRNA 12243202 12248415 12243202 ID=Msa0799150-mRNA-1;Parent=Msa0799150;Name=Msa0799150-mRNA-1;_AED=0.04;_eAED=0.04;_QI=156|1|1|1|1|1|9|2088|312
chr5_3 exon 12243202 12245355 12243202 ID=Msa0799150-mRNA-1:exon:5034;Parent=Msa0799150-mRNA-1
chr5_3 exon 12245590 12245671 12245590 ID=Msa0799150-mRNA-1:exon:5033;Parent=Msa0799150-mRNA-1
chr5_3 exon 12245758 12245865 12245758 ID=Msa0799150-mRNA-1:exon:5032;Parent=Msa0799150-mRNA-1
chr5_3 exon 12246359 12246456 12246359 ID=Msa0799150-mRNA-1:exon:5031;Parent=Msa0799150-mRNA-1
chr5_3 exon 12246710 12246808 12246710 ID=Msa0799150-mRNA-1:exon:5030;Parent=Msa0799150-mRNA-1
chr5_3 exon 12246915 12247052 12246915 ID=Msa0799150-mRNA-1:exon:5029;Parent=Msa0799150-mRNA-1
chr5_3 exon 12247327 12247378 12247327 ID=Msa0799150-mRNA-1:exon:5028;Parent=Msa0799150-mRNA-1
chr5_3 exon 12247850 12248074 12247850 ID=Msa0799150-mRNA-1:exon:5027;Parent=Msa0799150-mRNA-1
chr5_3 exon 12248189 12248415 12248189 ID=Msa0799150-mRNA-1:exon:5026;Parent=Msa0799150-mRNA-1
chr5_3 five_prime_UTR 12248260 12248415 12248260 ID=Msa0799150-mRNA-1:five_prime_utr;Parent=Msa0799150-mRNA-1
chr5_3 CDS 12248189 12248259 12248189 ID=Msa0799150-mRNA-1:cds;Parent=Msa0799150-mRNA-1
chr5_3 CDS 12247850 12248074 12247850 ID=Msa0799150-mRNA-1:cds;Parent=Msa0799150-mRNA-1
chr5_3 CDS 12247327 12247378 12247327 ID=Msa0799150-mRNA-1:cds;Parent=Msa0799150-mRNA-1
chr5_3 CDS 12246915 12247052 12246915 ID=Msa0799150-mRNA-1:cds;Parent=Msa0799150-mRNA-1
chr5_3 CDS 12246710 12246808 12246710 ID=Msa0799150-mRNA-1:cds;Parent=Msa0799150-mRNA-1
chr5_3 CDS 12246359 12246456 12246359 ID=Msa0799150-mRNA-1:cds;Parent=Msa0799150-mRNA-1
chr5_3 CDS 12245758 12245865 12245758 ID=Msa0799150-mRNA-1:cds;Parent=Msa0799150-mRNA-1
chr5_3 CDS 12245590 12245671 12245590 ID=Msa0799150-mRNA-1:cds;Parent=Msa0799150-mRNA-1
chr5_3 CDS 12245290 12245355 12245290 ID=Msa0799150-mRNA-1:cds;Parent=Msa0799150-mRNA-1
chr5_3 three_prime_UTR 12243202 12245289 12243202 ID=Msa0799150-mRNA-1:three_prime_utr;Parent=Msa0799150-mRNA-1
Gene Sequence

>Msa0799150

ATGGCGATGGCTTCAATGGCATTCTGTGGTGTCAACACAGTTACCTTTCAGAACCGTGGTCGATACAACAGTGGAATTGCATTTGCGAGTTTGGGAAATAAAGAAAAAACTACTTTGGGAGTAAAAGTTACCGAAGGTGAAGGAAATTTGCCTAAACTTGTTCTCACTTCTCCAGCTGGTAGTGAGGCTGAGATATATTTGTTTGGTGGTTGCATTACTTCCTGGAAAGTTCCTAATGGCAAAGACCTTCTTTTTGTTCGTCCTGACGCCGTTTTTAATAAGAAGAAACCAATAAGTGGAGGTATCCCACATTGCTTTCCACAGTTTGGTCCTGGTGCAATTCAGCAGCATGGATTTGCAAGGAATTTGGATTGGACTGTTGGTGATTCTGAGAATGTCGAGGGAAATCCTGTTGTAACTCTGGAACTGAAGGATGATACGTATAGTCGTGCTATGTGGGATTTCAGCTTTCATGCTTTATATAAGGTCACACTAAATGCTAAAAGTCTTTCGACTGAGTTAAAAGTTAAAAATACTGACAATAAGGCATTCTCATTCAATACTGCCCTGCACACATACTTTCGGGCTTCTGTAAGTGGTGCATCAGTTAAGGGGTTAAAAGGTTGCAAAACTCTGAACAAACATCCAGATCCTAATAATCCAATTGAGGGTAGTGAAGAAAGGGATGTGGTCACTTTCCCAGGATTTGTAGATTGTGTTTATCTTAACGCTTCAGATGAGTTGCAGCTTGATAATGGCTTGGGTGATATAATTTCTATCAAGAACACGAACTGGTCAGATGCGGTGTTGTGGAATCCTCATCTTCAAATGGAAGCATGTTACAAAGATTTTGTTTGTGTTGAAAATGCTAAGATTGGAAATGTCCAGCTCGAGCCTGAACAAACTTGGACAGCTGTGCAGCATCTTACCATTGCATGA
Protein sequence

>Msa0799150

MAMASMAFCGVNTVTFQNRGRYNSGIAFASLGNKEKTTLGVKVTEGEGNLPKLVLTSPAGSEAEIYLFGGCITSWKVPNGKDLLFVRPDAVFNKKKPISGGIPHCFPQFGPGAIQQHGFARNLDWTVGDSENVEGNPVVTLELKDDTYSRAMWDFSFHALYKVTLNAKSLSTELKVKNTDNKAFSFNTALHTYFRASVSGASVKGLKGCKTLNKHPDPNNPIEGSEERDVVTFPGFVDCVYLNASDELQLDNGLGDIISIKNTNWSDAVLWNPHLQMEACYKDFVCVENAKIGNVQLEPEQTWTAVQHLTIA*