Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198980 | XP_013463074.1 | 95.156 | 289 | 14 | 0 | 277 | 565 | 25 | 313 | 0.0 | 571 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198980 | sp|Q94CK4|ANXD8_ARATH | 59.028 | 288 | 118 | 0 | 277 | 564 | 25 | 312 | 1.75e-119 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198980 | A0A072V514 | 95.156 | 289 | 14 | 0 | 277 | 565 | 25 | 313 | 0.0 | 571 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001510 | Msa0198980 | 0.829102 | 6.210733e-55 | -8.615850e-47 |
| Msa0016160 | Msa0198980 | 0.801976 | 6.981520e-49 | -8.615850e-47 |
| Msa0021710 | Msa0198980 | 0.828985 | 6.628106e-55 | -8.615850e-47 |
| Msa0025340 | Msa0198980 | 0.804716 | 1.890363e-49 | -8.615850e-47 |
| Msa0046800 | Msa0198980 | 0.806712 | 7.200706e-50 | -8.615850e-47 |
| Msa0066990 | Msa0198980 | 0.801201 | 1.006769e-48 | -8.615850e-47 |
| Msa0069230 | Msa0198980 | 0.809170 | 2.159837e-50 | -8.615850e-47 |
| Msa0080620 | Msa0198980 | 0.800803 | 1.214083e-48 | -8.615850e-47 |
| Msa0112340 | Msa0198980 | 0.803942 | 2.740290e-49 | -8.615850e-47 |
| Msa0133450 | Msa0198980 | 0.814176 | 1.760374e-51 | -8.615850e-47 |
| Msa0149070 | Msa0198980 | 0.801260 | 9.793817e-49 | -8.615850e-47 |
| Msa0155550 | Msa0198980 | 0.802354 | 5.836802e-49 | -8.615850e-47 |
| Msa0168470 | Msa0198980 | 0.815240 | 1.023284e-51 | -8.615850e-47 |
| Msa0177180 | Msa0198980 | 0.805073 | 1.591571e-49 | -8.615850e-47 |
| Msa0186750 | Msa0198980 | 0.818131 | 2.300193e-52 | -8.615850e-47 |
| Msa0198980 | Msa0241720 | 0.819635 | 1.047092e-52 | -8.615850e-47 |
| Msa0198980 | Msa0243160 | 0.805703 | 1.174248e-49 | -8.615850e-47 |
| Msa0198980 | Msa0266100 | 0.806865 | 6.682275e-50 | -8.615850e-47 |
| Msa0198980 | Msa0304870 | 0.808260 | 3.379579e-50 | -8.615850e-47 |
| Msa0198980 | Msa0322480 | 0.800570 | 1.354927e-48 | -8.615850e-47 |
| Msa0198980 | Msa0334780 | 0.805930 | 1.052542e-49 | -8.615850e-47 |
| Msa0198980 | Msa0335860 | 0.823273 | 1.514027e-53 | -8.615850e-47 |
| Msa0198980 | Msa0341260 | 0.808641 | 2.803225e-50 | -8.615850e-47 |
| Msa0198980 | Msa0440720 | 0.828832 | 7.221410e-55 | -8.615850e-47 |
| Msa0198980 | Msa0544780 | 0.808105 | 3.647726e-50 | -8.615850e-47 |
| Msa0198980 | Msa0619530 | 0.801898 | 7.246581e-49 | -8.615850e-47 |
| Msa0198980 | Msa0705670 | 0.835460 | 1.656510e-56 | -8.615850e-47 |
| Msa0198980 | Msa0799490 | 0.802767 | 4.799620e-49 | -8.615850e-47 |
| Msa0198980 | Msa0825960 | 0.813887 | 2.038876e-51 | -8.615850e-47 |
| Msa0198980 | Msa0854190 | 0.821526 | 3.852556e-53 | -8.615850e-47 |
| Msa0198980 | Msa0928840 | 0.802381 | 5.763386e-49 | -8.615850e-47 |
| Msa0198980 | Msa0967940 | 0.805434 | 1.337138e-49 | -8.615850e-47 |
| Msa0198980 | Msa0970120 | 0.806785 | 6.949737e-50 | -8.615850e-47 |
| Msa0198980 | Msa1076070 | 0.804112 | 2.525926e-49 | -8.615850e-47 |
| Msa0198980 | Msa1206500 | 0.819638 | 1.045798e-52 | -8.615850e-47 |
| Msa0198980 | Msa1208630 | 0.805898 | 1.068912e-49 | -8.615850e-47 |
| Msa0198980 | Msa1214080 | 0.812029 | 5.206296e-51 | -8.615850e-47 |
| Msa0198980 | Msa1215790 | 0.802762 | 4.810507e-49 | -8.615850e-47 |
| Msa0198980 | Msa1237750 | 0.807907 | 4.019028e-50 | -8.615850e-47 |
| Msa0198980 | Msa1298180 | 0.835623 | 1.506866e-56 | -8.615850e-47 |
| Msa0198980 | Msa1330080 | 0.817170 | 3.789707e-52 | -8.615850e-47 |
| Msa0198980 | Msa1331900 | 0.811196 | 7.900015e-51 | -8.615850e-47 |
| Msa0198980 | Msa1348770 | 0.804937 | 1.699368e-49 | -8.615850e-47 |
| Msa0198980 | Msa1349720 | 0.805573 | 1.250715e-49 | -8.615850e-47 |
| Msa0198980 | Msa1364850 | 0.815244 | 1.021090e-51 | -8.615850e-47 |
| Msa0198980 | Msa1375120 | 0.804111 | 2.526806e-49 | -8.615850e-47 |
| Msa0198980 | Msa1375570 | 0.833296 | 5.784425e-56 | -8.615850e-47 |
| Msa0198980 | Msa1403820 | 0.800786 | 1.224192e-48 | -8.615850e-47 |
| Msa0198980 | Msa1408020 | 0.800097 | 1.691002e-48 | -8.615850e-47 |
| Msa0198980 | Msa1435690 | 0.819037 | 1.433064e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198980 | MtrunA17_Chr2g0293441 | 95.156 | 289 | 14 | 0 | 277 | 565 | 25 | 313 | 0.0 | 571 |
| Msa0198980 | MtrunA17_Chr2g0293451 | 95.327 | 214 | 7 | 2 | 1 | 212 | 1 | 213 | 3.13e-141 | 410 |
| Msa0198980 | MtrunA17_Chr8g0352621 | 47.115 | 312 | 161 | 1 | 258 | 565 | 1 | 312 | 1.12e-100 | 307 |
| Msa0198980 | MtrunA17_Chr3g0083901 | 48.097 | 289 | 150 | 0 | 275 | 563 | 23 | 311 | 4.21e-100 | 305 |
| Msa0198980 | MtrunA17_Chr5g0425971 | 47.945 | 292 | 152 | 0 | 273 | 564 | 22 | 313 | 8.90e-98 | 300 |
| Msa0198980 | MtrunA17_Chr3g0083921 | 47.405 | 289 | 152 | 0 | 277 | 565 | 25 | 313 | 6.42e-93 | 287 |
| Msa0198980 | MtrunA17_Chr8g0352611 | 45.270 | 296 | 161 | 1 | 270 | 565 | 18 | 312 | 5.43e-88 | 274 |
| Msa0198980 | MtrunA17_Chr8g0352591 | 45.645 | 287 | 145 | 1 | 277 | 563 | 25 | 300 | 9.43e-86 | 268 |
| Msa0198980 | MtrunA17_Chr8g0382281 | 43.643 | 291 | 164 | 0 | 275 | 565 | 24 | 314 | 4.30e-81 | 256 |
| Msa0198980 | MtrunA17_Chr8g0352571 | 37.329 | 292 | 180 | 1 | 275 | 563 | 24 | 315 | 2.32e-60 | 202 |
| Msa0198980 | MtrunA17_Chr8g0393281 | 35.616 | 292 | 186 | 2 | 273 | 563 | 22 | 312 | 1.75e-59 | 200 |
| Msa0198980 | MtrunA17_Chr6g0479411 | 35.135 | 296 | 190 | 2 | 269 | 563 | 45 | 339 | 2.78e-59 | 200 |
| Msa0198980 | MtrunA17_Chr6g0479421 | 35.473 | 296 | 189 | 2 | 269 | 563 | 18 | 312 | 1.04e-57 | 195 |
| Msa0198980 | MtrunA17_Chr8g0352581 | 37.618 | 319 | 174 | 6 | 262 | 563 | 1 | 311 | 5.48e-56 | 191 |
| Msa0198980 | MtrunA17_Chr1g0210981 | 34.122 | 296 | 193 | 2 | 269 | 563 | 18 | 312 | 2.08e-54 | 186 |
| Msa0198980 | MtrunA17_Chr1g0162071 | 33.333 | 294 | 194 | 2 | 273 | 565 | 22 | 314 | 4.88e-54 | 186 |
| Msa0198980 | MtrunA17_Chr6g0479391 | 33.784 | 296 | 194 | 2 | 269 | 563 | 18 | 312 | 7.84e-52 | 180 |
| Msa0198980 | MtrunA17_Chr6g0461141 | 26.277 | 274 | 194 | 4 | 296 | 561 | 34 | 307 | 4.42e-25 | 106 |
| Msa0198980 | MtrunA17_Chr3g0084021 | 44.118 | 68 | 38 | 0 | 396 | 463 | 5 | 72 | 2.18e-15 | 71.2 |
| Msa0198980 | MtrunA17_Chr3g0084011 | 55.102 | 49 | 22 | 0 | 277 | 325 | 25 | 73 | 3.24e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0198980 | AT5G12380.1 | 59.028 | 288 | 118 | 0 | 277 | 564 | 25 | 312 | 1.78e-120 | 358 |
| Msa0198980 | AT5G10230.1 | 46.441 | 295 | 158 | 0 | 271 | 565 | 20 | 314 | 7.30e-93 | 287 |
| Msa0198980 | AT5G10220.1 | 47.458 | 295 | 153 | 1 | 273 | 565 | 22 | 316 | 3.25e-92 | 286 |
| Msa0198980 | AT1G35720.1 | 45.205 | 292 | 159 | 1 | 275 | 565 | 24 | 315 | 1.39e-89 | 279 |
| Msa0198980 | AT5G65020.1 | 43.345 | 293 | 165 | 1 | 273 | 564 | 22 | 314 | 8.45e-85 | 266 |
| Msa0198980 | AT4G20760.1 | 76.331 | 169 | 40 | 0 | 44 | 212 | 44 | 212 | 3.38e-84 | 264 |
| Msa0198980 | AT4G20760.2 | 76.331 | 169 | 40 | 0 | 44 | 212 | 64 | 232 | 9.29e-84 | 264 |
| Msa0198980 | AT5G65020.2 | 43.253 | 289 | 163 | 1 | 277 | 564 | 11 | 299 | 1.89e-83 | 263 |
| Msa0198980 | AT2G38760.1 | 40.678 | 295 | 169 | 2 | 277 | 565 | 26 | 320 | 2.26e-69 | 226 |
| Msa0198980 | AT1G68090.1 | 32.154 | 311 | 207 | 2 | 257 | 563 | 3 | 313 | 2.30e-54 | 187 |
| Msa0198980 | AT2G38750.2 | 35.082 | 305 | 173 | 6 | 276 | 562 | 1 | 298 | 1.06e-50 | 177 |
| Msa0198980 | AT2G38750.1 | 34.713 | 314 | 180 | 6 | 267 | 562 | 9 | 315 | 1.12e-50 | 177 |
| Msa0198980 | AT1G68090.2 | 31.452 | 248 | 166 | 2 | 257 | 500 | 3 | 250 | 3.54e-40 | 147 |
Find 111 sgRNAs with CRISPR-Local
Find 333 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGACTTTCAATATCTTTA+AGG | 0.055725 | 2_1:-17796570 | Msa0198980:CDS |
| CTATTTCTGTCTTTGTTTCT+TGG | 0.133503 | 2_1:-17802092 | Msa0198980:five_prime_UTR |
| AAGTCATCTTACCTTATTAA+TGG | 0.196321 | 2_1:+17796532 | None:intergenic |
| TTCAATCAATTGATGAAGTA+TGG | 0.245555 | 2_1:+17796658 | None:intergenic |
| TTACCTTGGCCAAGTATCTT+TGG | 0.262025 | 2_1:+17796306 | None:intergenic |
| TAATGATGTGCAACAACTTT+TGG | 0.278163 | 2_1:+17799157 | None:intergenic |
| AGAAACCACATTGAACAAAT+TGG | 0.288395 | 2_1:-17800024 | Msa0198980:CDS |
| TTACCTGGTTGCAGCACTTC+AGG | 0.309608 | 2_1:+17800331 | None:intergenic |
| CAGCTCAAAACTGAACTTTC+AGG | 0.310428 | 2_1:-17797230 | Msa0198980:CDS |
| TTTCAATTGTAGGGATTATC+AGG | 0.320601 | 2_1:-17796389 | Msa0198980:intron |
| TAGAAATACTGAAGAGCTTC+TGG | 0.326830 | 2_1:-17796954 | Msa0198980:CDS |
| ATCTTTAATGCTTTCTTATG+AGG | 0.347301 | 2_1:-17799994 | Msa0198980:CDS |
| GTATGGCACAACCATTAATA+AGG | 0.354944 | 2_1:-17796543 | Msa0198980:intron |
| TGAAGAAGAGAATGCTCTTC+TGG | 0.356280 | 2_1:+17801945 | None:intergenic |
| TCAATAATCACTTTGTAATC+TGG | 0.360081 | 2_1:+17796989 | None:intergenic |
| AATATCTTTAAGGACTTGTA+TGG | 0.373979 | 2_1:-17796560 | Msa0198980:CDS |
| CAGTTGATGCATTAGGATTA+CGG | 0.378721 | 2_1:+17801586 | None:intergenic |
| AGTGCAAGGGTTGCATCTAT+TGG | 0.379178 | 2_1:-17799701 | Msa0198980:CDS |
| CATTAATGAGAAGGTTTAGA+TGG | 0.381244 | 2_1:+17800374 | None:intergenic |
| CGTAATCCTAATGCATCAAC+TGG | 0.384959 | 2_1:-17801585 | Msa0198980:CDS |
| AACTGGGCTTCTTCATTTGA+AGG | 0.387513 | 2_1:-17801568 | Msa0198980:CDS |
| CTTAAAGCTGGAGGTGGCAT+TGG | 0.391361 | 2_1:-17799758 | Msa0198980:CDS |
| GCTCCAATGTATTCATCAAT+TGG | 0.396159 | 2_1:+17796362 | None:intergenic |
| ATTCATTTCCCAACAATTCA+AGG | 0.397289 | 2_1:+17796006 | None:intergenic |
| AACCTTCTCATTAATGCATC+TGG | 0.398628 | 2_1:-17800367 | Msa0198980:CDS |
| TTCATTTGCCAGATCATTCA+AGG | 0.399618 | 2_1:+17796169 | None:intergenic |
| AGAAGCCCAGTTGATGCATT+AGG | 0.400206 | 2_1:+17801579 | None:intergenic |
| GAGAGGCAACATCTTCTTCA+AGG | 0.414127 | 2_1:+17796894 | None:intergenic |
| TCATCATCTTCTCAAGCTAA+TGG | 0.425069 | 2_1:-17801922 | Msa0198980:CDS |
| ATCCATTGTCCAATGACTAA+TGG | 0.425161 | 2_1:+17797063 | None:intergenic |
| TGCAATAGAATACATATGAT+TGG | 0.426249 | 2_1:+17799264 | None:intergenic |
| TAATGCCGTCGGTCCTATCT+TGG | 0.436507 | 2_1:-17799970 | Msa0198980:CDS |
| CAATGACAGCCAAAGATACT+TGG | 0.437410 | 2_1:-17796315 | Msa0198980:CDS |
| CAATGGCAAGTTCTTTGCTT+GGG | 0.439897 | 2_1:-17799115 | Msa0198980:CDS |
| AATGGTGTTTCCTTAGTTCA+AGG | 0.447999 | 2_1:-17801904 | Msa0198980:CDS |
| TTAAAGCTGGAGGTGGCATT+GGG | 0.448490 | 2_1:-17799757 | Msa0198980:CDS |
| TTCATTTCGGTGTGCTAGTA+CGG | 0.451418 | 2_1:+17797313 | None:intergenic |
| TTGTGGCTAGTTTGAGTGCA+AGG | 0.455555 | 2_1:-17799715 | Msa0198980:CDS |
| TCTGGAAGCTCCTTGAACTA+AGG | 0.459833 | 2_1:+17801894 | None:intergenic |
| TTATCAAGAAATTTATCATC+AGG | 0.460775 | 2_1:-17797264 | Msa0198980:CDS |
| TGAACTTTCAGGAAACTTTG+AGG | 0.461813 | 2_1:-17797219 | Msa0198980:intron |
| CTATTGGCGATAATCGTCTC+GGG | 0.464427 | 2_1:-17799685 | Msa0198980:CDS |
| ATCTCACGCCTTGAATGATC+TGG | 0.465214 | 2_1:-17796177 | Msa0198980:CDS |
| GGCAAGTTCTTTGCTTGGGA+TGG | 0.471669 | 2_1:-17799111 | Msa0198980:CDS |
| TCAAAGAAAACTTGTGAGGC+TGG | 0.474305 | 2_1:-17797288 | Msa0198980:CDS |
| GTTACCTTGATAACCAAGAT+AGG | 0.479512 | 2_1:+17799957 | None:intergenic |
| CGGTCCTATCTTGGTTATCA+AGG | 0.479719 | 2_1:-17799961 | Msa0198980:intron |
| CAAGGAGCTTCCAGAGGAAT+CGG | 0.479788 | 2_1:-17801886 | Msa0198980:CDS |
| ACAATGGCAAGTTCTTTGCT+TGG | 0.481131 | 2_1:-17799116 | Msa0198980:CDS |
| TCGTGCAGAGAAGGACTTGA+AGG | 0.481757 | 2_1:-17796117 | Msa0198980:CDS |
| GACTGTTGAAAGTTCTATTG+AGG | 0.482023 | 2_1:-17801505 | Msa0198980:intron |
| ATCAGAGAGCCATTAGTCAT+TGG | 0.483585 | 2_1:-17797072 | Msa0198980:intron |
| ATGTGGCCTCTTCTTAAAGC+TGG | 0.492856 | 2_1:-17799770 | Msa0198980:CDS |
| GAATTCAAGACCGATTCCTC+TGG | 0.498734 | 2_1:+17801876 | None:intergenic |
| AGTGTAGCATCTCTTTCAGC+TGG | 0.500813 | 2_1:+17797040 | None:intergenic |
| TATTAATGAGGCACTAAAGA+AGG | 0.504365 | 2_1:-17797017 | Msa0198980:CDS |
| CCATGGCTTCACGTTCCCCT+CGG | 0.507270 | 2_1:-17801981 | Msa0198980:CDS |
| GGGATGGTCAAGAAATTCCT+TGG | 0.508072 | 2_1:-17799095 | Msa0198980:intron |
| AGATCTGTGTCAACTGTACC+AGG | 0.510748 | 2_1:+17799240 | None:intergenic |
| GGCAATGCTTGTAAAGAGAA+TGG | 0.512438 | 2_1:+17796915 | None:intergenic |
| TTGTCAATAAAAGAGACATA+TGG | 0.523455 | 2_1:-17800397 | Msa0198980:CDS |
| CTTCTCCAATTTGTTCAATG+TGG | 0.532375 | 2_1:+17800019 | None:intergenic |
| CCATTCATGATTCTGTTGCT+AGG | 0.535196 | 2_1:-17796058 | Msa0198980:CDS |
| GATGTTGCCTCTCAAACTAC+TGG | 0.536143 | 2_1:-17796884 | Msa0198980:CDS |
| GCCATGGAAGTGTTAAGAGT+GGG | 0.537228 | 2_1:+17801997 | None:intergenic |
| GGAAAGAAGTGGTGCAGTTG+TGG | 0.541874 | 2_1:-17799732 | Msa0198980:CDS |
| CCCCACTCTTAACACTTCCA+TGG | 0.544148 | 2_1:-17801998 | Msa0198980:CDS |
| CCGAGGGGAACGTGAAGCCA+TGG | 0.545507 | 2_1:+17801981 | None:intergenic |
| ATTCTGTTGCTAGGAAGACA+TGG | 0.545887 | 2_1:-17796049 | Msa0198980:CDS |
| TCTATTGGCGATAATCGTCT+CGG | 0.545892 | 2_1:-17799686 | Msa0198980:CDS |
| TGCCAGATGCATTAATGAGA+AGG | 0.549104 | 2_1:+17800365 | None:intergenic |
| TGTGGCTAGTTTGAGTGCAA+GGG | 0.561568 | 2_1:-17799714 | Msa0198980:CDS |
| CCTCTTCTTAAAGCTGGAGG+TGG | 0.561667 | 2_1:-17799764 | Msa0198980:CDS |
| CCTAGCAACAGAATCATGAA+TGG | 0.562607 | 2_1:+17796058 | None:intergenic |
| AGTCCAATTGATGAATACAT+TGG | 0.565821 | 2_1:-17796365 | Msa0198980:CDS |
| TCTTATGAGGTTAATGCCGT+CGG | 0.566525 | 2_1:-17799981 | Msa0198980:CDS |
| CCACCTCCAGCTTTAAGAAG+AGG | 0.569003 | 2_1:+17799764 | None:intergenic |
| TATTGTCACTCGTGCAGAGA+AGG | 0.570093 | 2_1:-17796126 | Msa0198980:CDS |
| AGCTGGAGGTGGCATTGGGA+CGG | 0.573880 | 2_1:-17799753 | Msa0198980:CDS |
| ATATGTATTCTATTGCATCC+TGG | 0.575422 | 2_1:-17799258 | Msa0198980:CDS |
| TGGCCTCTTCTTAAAGCTGG+AGG | 0.586099 | 2_1:-17799767 | Msa0198980:CDS |
| TGGCTACTGATAGAAGCCGA+GGG | 0.589366 | 2_1:+17801965 | None:intergenic |
| CTGGCTACTGATAGAAGCCG+AGG | 0.596454 | 2_1:+17801964 | None:intergenic |
| CAAAGAACTTGCCATTGTCA+TGG | 0.596876 | 2_1:+17799121 | None:intergenic |
| AGATGCTACACTTATTAATG+AGG | 0.597858 | 2_1:-17797029 | Msa0198980:CDS |
| ATACCTGAAGTGCTGCAACC+AGG | 0.607063 | 2_1:-17800334 | Msa0198980:intron |
| TATTGGCGATAATCGTCTCG+GGG | 0.615665 | 2_1:-17799684 | Msa0198980:CDS |
| TTCTGTTGCTAGGAAGACAT+GGG | 0.615900 | 2_1:-17796048 | Msa0198980:CDS |
| AATTTCTAAATCAGCACATG+TGG | 0.616873 | 2_1:-17799787 | Msa0198980:intron |
| AATATCACCAGTAGTTTGAG+AGG | 0.620279 | 2_1:+17796877 | None:intergenic |
| GCTGTCATTGATGCATCGAA+CGG | 0.621539 | 2_1:+17796328 | None:intergenic |
| GGCATTGGGACGGAAAGAAG+TGG | 0.627744 | 2_1:-17799743 | Msa0198980:CDS |
| CTTTCAACAGTCAAATCCAA+AGG | 0.633353 | 2_1:+17801516 | None:intergenic |
| CATGGAAGTGTTAAGAGTGG+GGG | 0.635596 | 2_1:+17801999 | None:intergenic |
| TTAGTTCAAGGAGCTTCCAG+AGG | 0.637415 | 2_1:-17801892 | Msa0198980:CDS |
| CAGCCAAAGATACTTGGCCA+AGG | 0.646550 | 2_1:-17796309 | Msa0198980:intron |
| ATGGAAGTGTTAAGAGTGGG+GGG | 0.648435 | 2_1:+17802000 | None:intergenic |
| AAGCTCAAAGAAAACTTGTG+AGG | 0.650998 | 2_1:-17797292 | Msa0198980:CDS |
| AGCCATTAGTCATTGGACAA+TGG | 0.653584 | 2_1:-17797065 | Msa0198980:CDS |
| CCATGGAAGTGTTAAGAGTG+GGG | 0.656286 | 2_1:+17801998 | None:intergenic |
| AGCCATGGAAGTGTTAAGAG+TGG | 0.666238 | 2_1:+17801996 | None:intergenic |
| AATGTCAAGAGCCATGACAA+TGG | 0.667426 | 2_1:-17799132 | Msa0198980:CDS |
| AGAGAAAAGAACATGAAGCG+TGG | 0.679057 | 2_1:+17802058 | None:intergenic |
| GATAACCAAGATAGGACCGA+CGG | 0.679582 | 2_1:+17799965 | None:intergenic |
| AGATGAGTTTGATGAGAATG+TGG | 0.686942 | 2_1:-17796696 | Msa0198980:CDS |
| GTAATCCTAATGCATCAACT+GGG | 0.689940 | 2_1:-17801584 | Msa0198980:CDS |
| ATAAGCACTTACAAGTACGA+TGG | 0.694159 | 2_1:-17796719 | Msa0198980:CDS |
| ATTGGCGATAATCGTCTCGG+GGG | 0.707865 | 2_1:-17799683 | Msa0198980:CDS |
| TCTGTTGCTAGGAAGACATG+GGG | 0.714554 | 2_1:-17796047 | Msa0198980:CDS |
| GGCTACTGATAGAAGCCGAG+GGG | 0.732723 | 2_1:+17801966 | None:intergenic |
| TGGAAGTGTTAAGAGTGGGG+GGG | 0.744712 | 2_1:+17802001 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCAAATGAAAAAAATATTT+TGG | + | chr2_1:17797067-17797086 | None:intergenic | 10.0% |
| !! | TGTATTTATTATAATATTTC+AGG | - | chr2_1:17797682-17797701 | Msa0198980:intron | 10.0% |
| !!! | ATAATTTTAGAAGTAAAATT+GGG | - | chr2_1:17798226-17798245 | Msa0198980:intron | 10.0% |
| !! | ATATTTATTTATTAGTGATA+TGG | - | chr2_1:17799429-17799448 | Msa0198980:intron | 10.0% |
| !!! | TACATTTTATTTTATTTTTG+AGG | + | chr2_1:17800028-17800047 | None:intergenic | 10.0% |
| !! | TCAAAAATAAAATAAAATGT+AGG | - | chr2_1:17800027-17800046 | Msa0198980:intron | 10.0% |
| !! | AATTTCCAAAAAAAAAAAAA+TGG | + | chr2_1:17800123-17800142 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTGGAAATT+AGG | - | chr2_1:17800123-17800142 | Msa0198980:intron | 10.0% |
| !! | AGTTATTATTATATTGAAAA+GGG | - | chr2_1:17800290-17800309 | Msa0198980:intron | 10.0% |
| !!! | AAAGAAAAACATTGTTTTTA+AGG | + | chr2_1:17796275-17796294 | None:intergenic | 15.0% |
| !!! | ATGAAGAAAAGTAATTTTTT+TGG | + | chr2_1:17796321-17796340 | None:intergenic | 15.0% |
| !!! | AAAAAAATTACTTTTCTTCA+TGG | - | chr2_1:17796320-17796339 | Msa0198980:CDS | 15.0% |
| !!! | AAAAAATTACTTTTCTTCAT+GGG | - | chr2_1:17796321-17796340 | Msa0198980:CDS | 15.0% |
| !!! | TTTAGCTAATATTTAACTTT+AGG | - | chr2_1:17796808-17796827 | Msa0198980:intron | 15.0% |
| !! | TTTATTTGTTTATCTATTTG+TGG | - | chr2_1:17798203-17798222 | Msa0198980:intron | 15.0% |
| !!! | GATAATTTTAGAAGTAAAAT+TGG | - | chr2_1:17798225-17798244 | Msa0198980:intron | 15.0% |
| !! | AAAACAACTTATAGATTATA+TGG | - | chr2_1:17798681-17798700 | Msa0198980:intron | 15.0% |
| !!! | TTAGCAATATTTTTTTGAAA+TGG | + | chr2_1:17798903-17798922 | None:intergenic | 15.0% |
| !!! | TAAAAACATTGATTATTAGT+CGG | - | chr2_1:17799516-17799535 | Msa0198980:intron | 15.0% |
| !! | CAGTTATTATTATATTGAAA+AGG | - | chr2_1:17800289-17800308 | Msa0198980:intron | 15.0% |
| !! | AAAAAACGTATTTAGTTATT+AGG | - | chr2_1:17800389-17800408 | Msa0198980:CDS | 15.0% |
| !!! | TTAGTTATTAGGAATATTTT+AGG | - | chr2_1:17800400-17800419 | Msa0198980:CDS | 15.0% |
| !! | AAAAATTATCAAATAGAGAA+TGG | + | chr2_1:17801856-17801875 | None:intergenic | 15.0% |
| !! | TATGTTTAGTAAAAACTATA+GGG | + | chr2_1:17801882-17801901 | None:intergenic | 15.0% |
| !! | ATATGTTTAGTAAAAACTAT+AGG | + | chr2_1:17801883-17801902 | None:intergenic | 15.0% |
| !!! | AAAAATTACTTTTCTTCATG+GGG | - | chr2_1:17796322-17796341 | Msa0198980:CDS | 20.0% |
| !! | AAGAAAGAAAAACAATGAAT+GGG | + | chr2_1:17796644-17796663 | None:intergenic | 20.0% |
| !! | AAAGAAAGAAAAACAATGAA+TGG | + | chr2_1:17796645-17796664 | None:intergenic | 20.0% |
| !! | TTATATCCTCAAATAATCTT+TGG | - | chr2_1:17796930-17796949 | Msa0198980:CDS | 20.0% |
| !!! | ATGAAAAAAATATTTTGGCA+AGG | + | chr2_1:17797062-17797081 | None:intergenic | 20.0% |
| !! | ATTCTTAGTTGTATCAAAAT+GGG | - | chr2_1:17797198-17797217 | Msa0198980:intron | 20.0% |
| !!! | TTAACAAATGAATAGGTTTT+TGG | + | chr2_1:17797656-17797675 | None:intergenic | 20.0% |
| !!! | TAAAGATTTGTTTCATTCTT+TGG | - | chr2_1:17797799-17797818 | Msa0198980:intron | 20.0% |
| !! | CTAAAAACAGAATAATCAAA+AGG | - | chr2_1:17797880-17797899 | Msa0198980:intron | 20.0% |
| !! | CTTATCATATTGAATATAAC+AGG | + | chr2_1:17798521-17798540 | None:intergenic | 20.0% |
| !! | AAGCACTTATAGAATTATTT+GGG | - | chr2_1:17798589-17798608 | Msa0198980:intron | 20.0% |
| !! | ATATGATAAACTGTTTGAAA+TGG | - | chr2_1:17798742-17798761 | Msa0198980:intron | 20.0% |
| !!! | ATATTTGTTGTTGAAGATAA+AGG | - | chr2_1:17799160-17799179 | Msa0198980:CDS | 20.0% |
| !!! | AAAAACATTGATTATTAGTC+GGG | - | chr2_1:17799517-17799536 | Msa0198980:intron | 20.0% |
| !! | AAAGAATATAGTGATGATAA+GGG | - | chr2_1:17799554-17799573 | Msa0198980:intron | 20.0% |
| !!! | TTATCTTATTTCTTTATCGT+TGG | + | chr2_1:17799829-17799848 | None:intergenic | 20.0% |
| !! | TATATCCATGCAATAATATA+TGG | + | chr2_1:17800163-17800182 | None:intergenic | 20.0% |
| !!! | GAAAATGTTTTATGTAAAAG+TGG | + | chr2_1:17800235-17800254 | None:intergenic | 20.0% |
| !!! | AGTTTTTTTCTTCTTCTTTT+AGG | - | chr2_1:17800334-17800353 | Msa0198980:intron | 20.0% |
| !! | ATATTCATGTCTAATAACAA+AGG | - | chr2_1:17800684-17800703 | Msa0198980:intron | 20.0% |
| !! | TATTCATGTCTAATAACAAA+GGG | - | chr2_1:17800685-17800704 | Msa0198980:intron | 20.0% |
| !! | TTATCAAGAAATTTATCATC+AGG | - | chr2_1:17800846-17800865 | Msa0198980:intron | 20.0% |
| !!! | ATTTCCATGGTATAAATTTT+TGG | + | chr2_1:17801020-17801039 | None:intergenic | 20.0% |
| !! | TATTTCATGCAATAAAATCA+AGG | - | chr2_1:17801673-17801692 | Msa0198980:intron | 20.0% |
| !!! | AATTTGTTGTTTTCAATTGT+AGG | - | chr2_1:17801711-17801730 | Msa0198980:intron | 20.0% |
| !!! | ATTTGTTGTTTTCAATTGTA+GGG | - | chr2_1:17801712-17801731 | Msa0198980:intron | 20.0% |
| !!! | TATGTATGTTAACTTGATTT+AGG | - | chr2_1:17801906-17801925 | Msa0198980:CDS | 20.0% |
| !!! | ATTTTTATCCTTGAATTGTT+GGG | - | chr2_1:17802096-17802115 | Msa0198980:five_prime_UTR | 20.0% |
| !!! | TTTTCTCTGTTTTTTAGTCT+AGG | - | chr2_1:17796353-17796372 | Msa0198980:CDS | 25.0% |
| ! | ATACAATACAAAACACAACA+CGG | + | chr2_1:17796452-17796471 | None:intergenic | 25.0% |
| !! | TGTTGTGTTTTGTATTGTAT+AGG | - | chr2_1:17796452-17796471 | Msa0198980:intron | 25.0% |
| !!! | TTCTAGTCTTGTAACTAAAA+GGG | + | chr2_1:17796722-17796741 | None:intergenic | 25.0% |
| !!! | TGTTTTTTATCTTAACCTTC+CGG | + | chr2_1:17797014-17797033 | None:intergenic | 25.0% |
| !!! | CATTTTGATACAACTAAGAA+TGG | + | chr2_1:17797199-17797218 | None:intergenic | 25.0% |
| ! | CATTCTTAGTTGTATCAAAA+TGG | - | chr2_1:17797197-17797216 | Msa0198980:intron | 25.0% |
| ! | TTCTTAGTTGTATCAAAATG+GGG | - | chr2_1:17797199-17797218 | Msa0198980:intron | 25.0% |
| ! | ACAAAGCTTAACAAATGAAT+AGG | + | chr2_1:17797663-17797682 | None:intergenic | 25.0% |
| ! | TTGTCAATAAAAGAGACATA+TGG | - | chr2_1:17797713-17797732 | Msa0198980:intron | 25.0% |
| ! | TTTGTTTCATTCTTTGGTAA+TGG | - | chr2_1:17797805-17797824 | Msa0198980:intron | 25.0% |
| ! | GAATACATGAAGAAAAACTT+GGG | + | chr2_1:17797843-17797862 | None:intergenic | 25.0% |
| ! | AAAAAGTAATGAGTGTGTAA+TGG | - | chr2_1:17797962-17797981 | Msa0198980:intron | 25.0% |
| ! | ATCTTTAATGCTTTCTTATG+AGG | - | chr2_1:17798116-17798135 | Msa0198980:intron | 25.0% |
| !! | GAAGCACTTATAGAATTATT+TGG | - | chr2_1:17798588-17798607 | Msa0198980:intron | 25.0% |
| !! | ATGTTATAAGCTATTTCCAT+AGG | + | chr2_1:17798619-17798638 | None:intergenic | 25.0% |
| ! | TGCAATAGAATACATATGAT+TGG | + | chr2_1:17798849-17798868 | None:intergenic | 25.0% |
| ! | TATCATACATGCTATGTTAT+TGG | + | chr2_1:17799060-17799079 | None:intergenic | 25.0% |
| ! | GAAAGAATATAGTGATGATA+AGG | - | chr2_1:17799553-17799572 | Msa0198980:intron | 25.0% |
| ! | AAATATGGAGGAAAATATGT+AGG | - | chr2_1:17799990-17800009 | Msa0198980:CDS | 25.0% |
| !!! | GGTGTCCATTTTTTTTTTTT+TGG | - | chr2_1:17800115-17800134 | Msa0198980:intron | 25.0% |
| !!! | CGTAATTGATTGCTTTTTTT+AGG | - | chr2_1:17800199-17800218 | Msa0198980:intron | 25.0% |
| !!! | TATTAGGAATATTTTAGGAC+TGG | - | chr2_1:17800405-17800424 | Msa0198980:CDS | 25.0% |
| ! | GCTTGAAGAAAGAAAAAAAA+TGG | - | chr2_1:17800528-17800547 | Msa0198980:intron | 25.0% |
| !! | AAGGGAATAAATTTTATTCG+AGG | - | chr2_1:17800703-17800722 | Msa0198980:intron | 25.0% |
| !! | ATGTGATTTTTATCATGTAC+AGG | - | chr2_1:17800745-17800764 | Msa0198980:intron | 25.0% |
| !! | TTTTTATCATGTACAGGATT+CGG | - | chr2_1:17800751-17800770 | Msa0198980:intron | 25.0% |
| ! | GTTTCAAAATCTATACTTTG+AGG | - | chr2_1:17800964-17800983 | Msa0198980:intron | 25.0% |
| ! | ATTGCCAAAAATTTATACCA+TGG | - | chr2_1:17801013-17801032 | Msa0198980:intron | 25.0% |
| ! | TCAATAATCACTTTGTAATC+TGG | + | chr2_1:17801124-17801143 | None:intergenic | 25.0% |
| !!! | AACAGTTTTGTTATGTTACA+TGG | - | chr2_1:17801301-17801320 | Msa0198980:intron | 25.0% |
| ! | TTCAATCAATTGATGAAGTA+TGG | + | chr2_1:17801455-17801474 | None:intergenic | 25.0% |
| ! | TGTGACTTTCAATATCTTTA+AGG | - | chr2_1:17801540-17801559 | Msa0198980:CDS | 25.0% |
| !! | AATATCTTTAAGGACTTGTA+TGG | - | chr2_1:17801550-17801569 | Msa0198980:CDS | 25.0% |
| ! | AAGTCATCTTACCTTATTAA+TGG | + | chr2_1:17801581-17801600 | None:intergenic | 25.0% |
| !!! | TTCTTTGAGAAATCTTTTGA+AGG | + | chr2_1:17801638-17801657 | None:intergenic | 25.0% |
| ! | CAATAAAATCAAGGATATCA+TGG | - | chr2_1:17801682-17801701 | Msa0198980:intron | 25.0% |
| ! | AACCAAAGTCACAAAAATAT+TGG | - | chr2_1:17801825-17801844 | Msa0198980:intron | 25.0% |
| !! | CATTGTTTCTCTTCAAAAAA+TGG | + | chr2_1:17802029-17802048 | None:intergenic | 25.0% |
| !! | GATTTTTATCCTTGAATTGT+TGG | - | chr2_1:17802095-17802114 | Msa0198980:five_prime_UTR | 25.0% |
| !! | CTATTTCTGTCTTTGTTTCT+TGG | - | chr2_1:17796018-17796037 | Msa0198980:CDS | 30.0% |
| !!! | TTTTTTGGCAATGTAGTGAA+TGG | + | chr2_1:17796306-17796325 | None:intergenic | 30.0% |
| AACTAAAAACTCTATACCAC+CGG | + | chr2_1:17796428-17796447 | None:intergenic | 30.0% | |
| !! | CTTCTAGTCTTGTAACTAAA+AGG | + | chr2_1:17796723-17796742 | None:intergenic | 30.0% |
| !! | CTTTTAGTTACAAGACTAGA+AGG | - | chr2_1:17796721-17796740 | Msa0198980:CDS | 30.0% |
| GGTAGATGCTAAAGTTAATA+TGG | - | chr2_1:17796742-17796761 | Msa0198980:intron | 30.0% | |
| TAGATATGAGATTTGTGACA+AGG | - | chr2_1:17796772-17796791 | Msa0198980:intron | 30.0% | |
| ATTGAGTCTAACAACATAGA+AGG | + | chr2_1:17796868-17796887 | None:intergenic | 30.0% | |
| TCTATGTTGTTAGACTCAAT+TGG | - | chr2_1:17796868-17796887 | Msa0198980:intron | 30.0% | |
| ACATTTCAACAATGCTACAT+TGG | - | chr2_1:17797106-17797125 | Msa0198980:intron | 30.0% | |
| TCTTAGTTGTATCAAAATGG+GGG | - | chr2_1:17797200-17797219 | Msa0198980:intron | 30.0% | |
| ! | TGCAATATCTTTTATGCTCA+AGG | + | chr2_1:17797244-17797263 | None:intergenic | 30.0% |
| CTTATCAGCGTAGTAAATAA+TGG | + | chr2_1:17797275-17797294 | None:intergenic | 30.0% | |
| GTGATTTCAATTGTATATCG+CGG | - | chr2_1:17797294-17797313 | Msa0198980:CDS | 30.0% | |
| GTTCAAATTCTACTATGCTA+TGG | - | chr2_1:17797330-17797349 | Msa0198980:CDS | 30.0% | |
| CTATAGCGAATTTGAACAAA+TGG | + | chr2_1:17797424-17797443 | None:intergenic | 30.0% | |
| GGAAGGATTAACAAATATAG+CGG | - | chr2_1:17797513-17797532 | Msa0198980:intron | 30.0% | |
| AATACCAGTCTTGATAGAAA+AGG | + | chr2_1:17797539-17797558 | None:intergenic | 30.0% | |
| TTTCTATCAAGACTGGTATT+AGG | - | chr2_1:17797539-17797558 | Msa0198980:intron | 30.0% | |
| AATTTAACGTGATCAGCTAT+AGG | - | chr2_1:17797586-17797605 | Msa0198980:intron | 30.0% | |
| CATTAATGAGAAGGTTTAGA+TGG | + | chr2_1:17797739-17797758 | None:intergenic | 30.0% | |
| GAATGAAACAAATCTTTACC+TGG | + | chr2_1:17797797-17797816 | None:intergenic | 30.0% | |
| ATGAAGAAAAACTTGGGAAA+TGG | + | chr2_1:17797837-17797856 | None:intergenic | 30.0% | |
| GGAATACATGAAGAAAAACT+TGG | + | chr2_1:17797844-17797863 | None:intergenic | 30.0% | |
| AGAAACCACATTGAACAAAT+TGG | - | chr2_1:17798086-17798105 | Msa0198980:intron | 30.0% | |
| AATTTCTAAATCAGCACATG+TGG | - | chr2_1:17798323-17798342 | Msa0198980:intron | 30.0% | |
| CAATATGATAAGTGCATCAT+TGG | - | chr2_1:17798529-17798548 | Msa0198980:intron | 30.0% | |
| TGACACTGTTTGAATATAAG+CGG | + | chr2_1:17798790-17798809 | None:intergenic | 30.0% | |
| ATATGTATTCTATTGCATCC+TGG | - | chr2_1:17798852-17798871 | Msa0198980:intron | 30.0% | |
| ! | TAATGATGTGCAACAACTTT+TGG | + | chr2_1:17798956-17798975 | None:intergenic | 30.0% |
| ACAAATATGACAGATTACCA+AGG | + | chr2_1:17799035-17799054 | None:intergenic | 30.0% | |
| TTTACCATCATTTCCTGTTA+AGG | - | chr2_1:17799221-17799240 | Msa0198980:CDS | 30.0% | |
| ATCATTTCCTGTTAAGGAAA+CGG | - | chr2_1:17799227-17799246 | Msa0198980:CDS | 30.0% | |
| CAATGTTGTCAAAATGGAAT+TGG | - | chr2_1:17799258-17799277 | Msa0198980:CDS | 30.0% | |
| ! | TTTTCAAATTCTCGGTTGAA+CGG | + | chr2_1:17799290-17799309 | None:intergenic | 30.0% |
| ! | TTGATCGACTCTAAAAGTAA+AGG | + | chr2_1:17799345-17799364 | None:intergenic | 30.0% |
| ATTAGTGATATGGTTCATTG+TGG | - | chr2_1:17799439-17799458 | Msa0198980:intron | 30.0% | |
| !! | AATCTTGTTGGTTTGATCTT+CGG | - | chr2_1:17799485-17799504 | Msa0198980:intron | 30.0% |
| TTATTAGTCGGGTATGAATA+TGG | - | chr2_1:17799528-17799547 | Msa0198980:intron | 30.0% | |
| TATTAGTCGGGTATGAATAT+GGG | - | chr2_1:17799529-17799548 | Msa0198980:intron | 30.0% | |
| !! | CAATTTGATTGGTAACGAAT+TGG | + | chr2_1:17799648-17799667 | None:intergenic | 30.0% |
| TATTTCCGTGACAATTTGAT+TGG | + | chr2_1:17799659-17799678 | None:intergenic | 30.0% | |
| ! | AACAAAACTCTTTTCGTAGT+TGG | - | chr2_1:17799887-17799906 | Msa0198980:intron | 30.0% |
| TAATGCATTTATCAAACACG+TGG | - | chr2_1:17799942-17799961 | Msa0198980:intron | 30.0% | |
| ACTGTTCAGACGTATAAATA+TGG | - | chr2_1:17799975-17799994 | Msa0198980:CDS | 30.0% | |
| ACGTATTCGACTTTATAGTT+AGG | - | chr2_1:17800094-17800113 | Msa0198980:intron | 30.0% | |
| ACTTGCCATATATTATTGCA+TGG | - | chr2_1:17800155-17800174 | Msa0198980:intron | 30.0% | |
| !!! | TAGGACTGGAAGTTTTTTTT+AGG | - | chr2_1:17800419-17800438 | Msa0198980:intron | 30.0% |
| !!! | AGGACTGGAAGTTTTTTTTA+GGG | - | chr2_1:17800420-17800439 | Msa0198980:intron | 30.0% |
| ATAGTTTCAGCATCTTCAAT+TGG | + | chr2_1:17800583-17800602 | None:intergenic | 30.0% | |
| !!! | AATTTTATTCGAGGCATTGT+CGG | - | chr2_1:17800712-17800731 | Msa0198980:intron | 30.0% |
| ! | TTTTATCATGTACAGGATTC+GGG | - | chr2_1:17800752-17800771 | Msa0198980:intron | 30.0% |
| ! | GTTTTCTTTGAGCTTCATTT+CGG | + | chr2_1:17800813-17800832 | None:intergenic | 30.0% |
| AGATGCTACACTTATTAATG+AGG | - | chr2_1:17801081-17801100 | Msa0198980:intron | 30.0% | |
| ! | TATTAATGAGGCACTAAAGA+AGG | - | chr2_1:17801093-17801112 | Msa0198980:intron | 30.0% |
| TTTGAACAAGTGCAACAAAA+TGG | - | chr2_1:17801331-17801350 | Msa0198980:intron | 30.0% | |
| ! | AGCTTTTAACGATGATGAAA+TGG | - | chr2_1:17801480-17801499 | Msa0198980:intron | 30.0% |
| TTTCAATTGTAGGGATTATC+AGG | - | chr2_1:17801721-17801740 | Msa0198980:intron | 30.0% | |
| AGTCCAATTGATGAATACAT+TGG | - | chr2_1:17801745-17801764 | Msa0198980:intron | 30.0% | |
| !! | CTCCAATATTTTTGTGACTT+TGG | + | chr2_1:17801830-17801849 | None:intergenic | 30.0% |
| ATTCATTTCCCAACAATTCA+AGG | + | chr2_1:17802107-17802126 | None:intergenic | 30.0% | |
| TCATCATCTTCTCAAGCTAA+TGG | - | chr2_1:17796188-17796207 | Msa0198980:intron | 35.0% | |
| AATGGTGTTTCCTTAGTTCA+AGG | - | chr2_1:17796206-17796225 | Msa0198980:intron | 35.0% | |
| ! | CAGTTGATGCATTAGGATTA+CGG | + | chr2_1:17796527-17796546 | None:intergenic | 35.0% |
| GTAATCCTAATGCATCAACT+GGG | - | chr2_1:17796526-17796545 | Msa0198980:intron | 35.0% | |
| ! | TCGACTTCAAATTTTGCCTT+TGG | - | chr2_1:17796578-17796597 | Msa0198980:CDS | 35.0% |
| CTTTCAACAGTCAAATCCAA+AGG | + | chr2_1:17796597-17796616 | None:intergenic | 35.0% | |
| GACTGTTGAAAGTTCTATTG+AGG | - | chr2_1:17796605-17796624 | Msa0198980:CDS | 35.0% | |
| ! | TTAGACACCAAGTTGAGATT+TGG | - | chr2_1:17796693-17796712 | Msa0198980:CDS | 35.0% |
| GTCTGACCAAAGATTATTTG+AGG | + | chr2_1:17796939-17796958 | None:intergenic | 35.0% | |
| AATGCTACATTGGATAAGTG+AGG | - | chr2_1:17797116-17797135 | Msa0198980:intron | 35.0% | |
| GATACAACTAAGAATGGCAA+TGG | + | chr2_1:17797193-17797212 | None:intergenic | 35.0% | |
| ATCAGCGTAGTAAATAATGG+TGG | + | chr2_1:17797272-17797291 | None:intergenic | 35.0% | |
| !! | CAAGTGGGTTAACTTAATCA+GGG | + | chr2_1:17797467-17797486 | None:intergenic | 35.0% |
| !! | ACAAGTGGGTTAACTTAATC+AGG | + | chr2_1:17797468-17797487 | None:intergenic | 35.0% |
| !! | ATCAGCTATAGGCTTTGTTT+AGG | - | chr2_1:17797597-17797616 | Msa0198980:intron | 35.0% |
| ! | CTCTTTTATTGACAATGCAG+AGG | + | chr2_1:17797708-17797727 | None:intergenic | 35.0% |
| AACCTTCTCATTAATGCATC+TGG | - | chr2_1:17797743-17797762 | Msa0198980:intron | 35.0% | |
| AAGTAATGAGTGTGTAATGG+AGG | - | chr2_1:17797965-17797984 | Msa0198980:intron | 35.0% | |
| ! | CTTCTCCAATTTGTTCAATG+TGG | + | chr2_1:17798094-17798113 | None:intergenic | 35.0% |
| ! | GTTACCTTGATAACCAAGAT+AGG | + | chr2_1:17798156-17798175 | None:intergenic | 35.0% |
| TGGGTTTCTTTATGTGTATG+AGG | - | chr2_1:17798245-17798264 | Msa0198980:intron | 35.0% | |
| TATGAGGTTATAGAAGCCTT+AGG | - | chr2_1:17798261-17798280 | Msa0198980:intron | 35.0% | |
| ATGAGGTTATAGAAGCCTTA+GGG | - | chr2_1:17798262-17798281 | Msa0198980:intron | 35.0% | |
| GAATTATTTGGGAGAACCTA+TGG | - | chr2_1:17798600-17798619 | Msa0198980:intron | 35.0% | |
| GTTTCCTTAACAGGAAATGA+TGG | + | chr2_1:17799228-17799247 | None:intergenic | 35.0% | |
| ACCTAGCAATGTTGTCAAAA+TGG | - | chr2_1:17799252-17799271 | Msa0198980:CDS | 35.0% | |
| !! | TCCATTTTGACAACATTGCT+AGG | + | chr2_1:17799256-17799275 | None:intergenic | 35.0% |
| ! | CCGGAAGATTTTCAAATTCT+CGG | + | chr2_1:17799298-17799317 | None:intergenic | 35.0% |
| CCGAGAATTTGAAAATCTTC+CGG | - | chr2_1:17799295-17799314 | Msa0198980:intron | 35.0% | |
| GAATTTGAAAATCTTCCGGT+TGG | - | chr2_1:17799299-17799318 | Msa0198980:intron | 35.0% | |
| AGTAAAGGATGGATCAAATG+CGG | + | chr2_1:17799330-17799349 | None:intergenic | 35.0% | |
| ! | TCGACTCTAAAAGTAAAGGA+TGG | + | chr2_1:17799341-17799360 | None:intergenic | 35.0% |
| ! | AAACCAACAAGATTTTCAGC+TGG | + | chr2_1:17799479-17799498 | None:intergenic | 35.0% |
| CGTTACCAATCAAATTGTCA+CGG | - | chr2_1:17799651-17799670 | Msa0198980:intron | 35.0% | |
| GTTCAGACGTATAAATATGG+AGG | - | chr2_1:17799978-17799997 | Msa0198980:CDS | 35.0% | |
| ACTATCAAGAATGCATGCAA+AGG | - | chr2_1:17800598-17800617 | Msa0198980:intron | 35.0% | |
| AAGCTCAAAGAAAACTTGTG+AGG | - | chr2_1:17800818-17800837 | Msa0198980:intron | 35.0% | |
| TGAACTTTCAGGAAACTTTG+AGG | - | chr2_1:17800891-17800910 | Msa0198980:intron | 35.0% | |
| ATCCATTGTCCAATGACTAA+TGG | + | chr2_1:17801050-17801069 | None:intergenic | 35.0% | |
| TAGAAATACTGAAGAGCTTC+TGG | - | chr2_1:17801156-17801175 | Msa0198980:intron | 35.0% | |
| AATATCACCAGTAGTTTGAG+AGG | + | chr2_1:17801236-17801255 | None:intergenic | 35.0% | |
| ! | ACTATTTCTCATGCAGTTGT+TGG | - | chr2_1:17801360-17801379 | Msa0198980:intron | 35.0% |
| ATAAGCACTTACAAGTACGA+TGG | - | chr2_1:17801391-17801410 | Msa0198980:intron | 35.0% | |
| AGATGAGTTTGATGAGAATG+TGG | - | chr2_1:17801414-17801433 | Msa0198980:intron | 35.0% | |
| GTATGGCACAACCATTAATA+AGG | - | chr2_1:17801567-17801586 | Msa0198980:CDS | 35.0% | |
| GCTCCAATGTATTCATCAAT+TGG | + | chr2_1:17801751-17801770 | None:intergenic | 35.0% | |
| ! | TTTTGTGACTTTGGTTACCT+TGG | + | chr2_1:17801821-17801840 | None:intergenic | 35.0% |
| TTCATTTGCCAGATCATTCA+AGG | + | chr2_1:17801944-17801963 | None:intergenic | 35.0% | |
| AGAGAAAAGAACATGAAGCG+TGG | + | chr2_1:17796055-17796074 | None:intergenic | 40.0% | |
| TGAAGAAGAGAATGCTCTTC+TGG | + | chr2_1:17796168-17796187 | None:intergenic | 40.0% | |
| GACATTGGACACAATTGTTG+TGG | - | chr2_1:17796389-17796408 | Msa0198980:intron | 40.0% | |
| CGTAATCCTAATGCATCAAC+TGG | - | chr2_1:17796525-17796544 | Msa0198980:intron | 40.0% | |
| AACTGGGCTTCTTCATTTGA+AGG | - | chr2_1:17796542-17796561 | Msa0198980:intron | 40.0% | |
| ! | CAGTAATCTGGAATTCGTCT+GGG | + | chr2_1:17796973-17796992 | None:intergenic | 40.0% |
| ATATGTCAGCTACTAGTTGG+AGG | + | chr2_1:17797150-17797169 | None:intergenic | 40.0% | |
| TCCAACTAGTAGCTGACATA+TGG | - | chr2_1:17797149-17797168 | Msa0198980:intron | 40.0% | |
| TCCATATGTCAGCTACTAGT+TGG | + | chr2_1:17797153-17797172 | None:intergenic | 40.0% | |
| GAATGGCAATGGTTATAGTG+TGG | + | chr2_1:17797182-17797201 | None:intergenic | 40.0% | |
| TTGTACCAAATAGCACATCG+CGG | - | chr2_1:17797390-17797409 | Msa0198980:intron | 40.0% | |
| CCATTTCGAAACTGACAAGT+GGG | + | chr2_1:17797482-17797501 | None:intergenic | 40.0% | |
| CCACTTGTCAGTTTCGAAAT+GGG | - | chr2_1:17797480-17797499 | Msa0198980:intron | 40.0% | |
| TGCCAGATGCATTAATGAGA+AGG | + | chr2_1:17797748-17797767 | None:intergenic | 40.0% | |
| TCTTATGAGGTTAATGCCGT+CGG | - | chr2_1:17798129-17798148 | Msa0198980:intron | 40.0% | |
| TCTATTGGCGATAATCGTCT+CGG | - | chr2_1:17798424-17798443 | Msa0198980:intron | 40.0% | |
| ! | CTTTTGGACTGAGTACTCTT+TGG | + | chr2_1:17798940-17798959 | None:intergenic | 40.0% |
| AATGTCAAGAGCCATGACAA+TGG | - | chr2_1:17798978-17798997 | Msa0198980:intron | 40.0% | |
| CAAAGAACTTGCCATTGTCA+TGG | + | chr2_1:17798992-17799011 | None:intergenic | 40.0% | |
| ACAATGGCAAGTTCTTTGCT+TGG | - | chr2_1:17798994-17799013 | Msa0198980:intron | 40.0% | |
| CAATGGCAAGTTCTTTGCTT+GGG | - | chr2_1:17798995-17799014 | Msa0198980:intron | 40.0% | |
| TAGGTAACCGTTTCCTTAAC+AGG | + | chr2_1:17799237-17799256 | None:intergenic | 40.0% | |
| !!! | CTTTTAGAGTCGATCAAACC+CGG | - | chr2_1:17799348-17799367 | Msa0198980:intron | 40.0% |
| GAACCAGCTGAAAATCTTGT+TGG | - | chr2_1:17799473-17799492 | Msa0198980:intron | 40.0% | |
| CATTCATCTTGTAAGCTGTG+AGG | + | chr2_1:17799713-17799732 | None:intergenic | 40.0% | |
| AAGCTAGCCATATTTGTACG+AGG | - | chr2_1:17799800-17799819 | Msa0198980:intron | 40.0% | |
| AGATCGTAGGCTCTATCAAT+CGG | + | chr2_1:17800054-17800073 | None:intergenic | 40.0% | |
| ! | TTCATTTCGGTGTGCTAGTA+CGG | + | chr2_1:17800800-17800819 | None:intergenic | 40.0% |
| TCAAAGAAAACTTGTGAGGC+TGG | - | chr2_1:17800822-17800841 | Msa0198980:intron | 40.0% | |
| CAGCTCAAAACTGAACTTTC+AGG | - | chr2_1:17800880-17800899 | Msa0198980:intron | 40.0% | |
| TAATGGCTCTCTGATTTCCA+TGG | + | chr2_1:17801033-17801052 | None:intergenic | 40.0% | |
| ATCAGAGAGCCATTAGTCAT+TGG | - | chr2_1:17801038-17801057 | Msa0198980:intron | 40.0% | |
| AGCCATTAGTCATTGGACAA+TGG | - | chr2_1:17801045-17801064 | Msa0198980:intron | 40.0% | |
| GGCAATGCTTGTAAAGAGAA+TGG | + | chr2_1:17801198-17801217 | None:intergenic | 40.0% | |
| CAATGACAGCCAAAGATACT+TGG | - | chr2_1:17801795-17801814 | Msa0198980:intron | 40.0% | |
| TTACCTTGGCCAAGTATCTT+TGG | + | chr2_1:17801807-17801826 | None:intergenic | 40.0% | |
| CCTAGCAACAGAATCATGAA+TGG | + | chr2_1:17802055-17802074 | None:intergenic | 40.0% | |
| CCATTCATGATTCTGTTGCT+AGG | - | chr2_1:17802052-17802071 | Msa0198980:exon | 40.0% | |
| ATTCTGTTGCTAGGAAGACA+TGG | - | chr2_1:17802061-17802080 | Msa0198980:five_prime_UTR | 40.0% | |
| TTCTGTTGCTAGGAAGACAT+GGG | - | chr2_1:17802062-17802081 | Msa0198980:five_prime_UTR | 40.0% | |
| !! | ATGGAAGTGTTAAGAGTGGG+GGG | + | chr2_1:17796113-17796132 | None:intergenic | 45.0% |
| !! | CATGGAAGTGTTAAGAGTGG+GGG | + | chr2_1:17796114-17796133 | None:intergenic | 45.0% |
| !! | CCATGGAAGTGTTAAGAGTG+GGG | + | chr2_1:17796115-17796134 | None:intergenic | 45.0% |
| !! | GCCATGGAAGTGTTAAGAGT+GGG | + | chr2_1:17796116-17796135 | None:intergenic | 45.0% |
| !! | AGCCATGGAAGTGTTAAGAG+TGG | + | chr2_1:17796117-17796136 | None:intergenic | 45.0% |
| TCTGGAAGCTCCTTGAACTA+AGG | + | chr2_1:17796219-17796238 | None:intergenic | 45.0% | |
| TTAGTTCAAGGAGCTTCCAG+AGG | - | chr2_1:17796218-17796237 | Msa0198980:intron | 45.0% | |
| ! | GAATTCAAGACCGATTCCTC+TGG | + | chr2_1:17796237-17796256 | None:intergenic | 45.0% |
| GACACAATTGTTGTGGACAC+CGG | - | chr2_1:17796396-17796415 | Msa0198980:intron | 45.0% | |
| ! | AGAAGCCCAGTTGATGCATT+AGG | + | chr2_1:17796534-17796553 | None:intergenic | 45.0% |
| AGGGTCACCAAATCTCAACT+TGG | + | chr2_1:17796703-17796722 | None:intergenic | 45.0% | |
| ! | GCAGTAATCTGGAATTCGTC+TGG | + | chr2_1:17796974-17796993 | None:intergenic | 45.0% |
| ! | TTGTTCCGCGATGTGCTATT+TGG | + | chr2_1:17797398-17797417 | None:intergenic | 45.0% |
| CCCACTTGTCAGTTTCGAAA+TGG | - | chr2_1:17797479-17797498 | Msa0198980:intron | 45.0% | |
| CCCATTTCGAAACTGACAAG+TGG | + | chr2_1:17797483-17797502 | None:intergenic | 45.0% | |
| TTCGAAATGGGAACGTGTCT+AGG | - | chr2_1:17797492-17797511 | Msa0198980:intron | 45.0% | |
| AAATGGGAACGTGTCTAGGA+AGG | - | chr2_1:17797496-17797515 | Msa0198980:intron | 45.0% | |
| !!! | TGTTTTTAGTGCGTGCAAGC+GGG | + | chr2_1:17797869-17797888 | None:intergenic | 45.0% |
| !!! | CTGTTTTTAGTGCGTGCAAG+CGG | + | chr2_1:17797870-17797889 | None:intergenic | 45.0% |
| GCAGCAGATTTGTGAGAACA+CGG | - | chr2_1:17797938-17797957 | Msa0198980:intron | 45.0% | |
| GATAACCAAGATAGGACCGA+CGG | + | chr2_1:17798148-17798167 | None:intergenic | 45.0% | |
| CGGTCCTATCTTGGTTATCA+AGG | - | chr2_1:17798149-17798168 | Msa0198980:intron | 45.0% | |
| GACTCAAACTACATGCCCTA+AGG | + | chr2_1:17798280-17798299 | None:intergenic | 45.0% | |
| ATGTGGCCTCTTCTTAAAGC+TGG | - | chr2_1:17798340-17798359 | Msa0198980:intron | 45.0% | |
| TTAAAGCTGGAGGTGGCATT+GGG | - | chr2_1:17798353-17798372 | Msa0198980:intron | 45.0% | |
| !! | TTGTGGCTAGTTTGAGTGCA+AGG | - | chr2_1:17798395-17798414 | Msa0198980:intron | 45.0% |
| !! | TGTGGCTAGTTTGAGTGCAA+GGG | - | chr2_1:17798396-17798415 | Msa0198980:intron | 45.0% |
| AGTGCAAGGGTTGCATCTAT+TGG | - | chr2_1:17798409-17798428 | Msa0198980:intron | 45.0% | |
| CTATTGGCGATAATCGTCTC+GGG | - | chr2_1:17798425-17798444 | Msa0198980:intron | 45.0% | |
| TATTGGCGATAATCGTCTCG+GGG | - | chr2_1:17798426-17798445 | Msa0198980:intron | 45.0% | |
| AGTGTCAAAGACGATCTCGT+TGG | - | chr2_1:17798803-17798822 | Msa0198980:intron | 45.0% | |
| AGATCTGTGTCAACTGTACC+AGG | + | chr2_1:17798873-17798892 | None:intergenic | 45.0% | |
| GGGATGGTCAAGAAATTCCT+TGG | - | chr2_1:17799015-17799034 | Msa0198980:intron | 45.0% | |
| TCAAATGCGGTTGAACCAAC+CGG | + | chr2_1:17799317-17799336 | None:intergenic | 45.0% | |
| TTCAAACTGATTGTCCCACC+GGG | + | chr2_1:17799369-17799388 | None:intergenic | 45.0% | |
| GTTCAAACTGATTGTCCCAC+CGG | + | chr2_1:17799370-17799389 | None:intergenic | 45.0% | |
| GGTGGGACAATCAGTTTGAA+CGG | - | chr2_1:17799369-17799388 | Msa0198980:intron | 45.0% | |
| CTAGCCATATTTGTACGAGG+AGG | - | chr2_1:17799803-17799822 | Msa0198980:intron | 45.0% | |
| TTGGCCTCCTCGTACAAATA+TGG | + | chr2_1:17799810-17799829 | None:intergenic | 45.0% | |
| GTGTGATACGACTAGATCGT+AGG | + | chr2_1:17800067-17800086 | None:intergenic | 45.0% | |
| AGTGTAGCATCTCTTTCAGC+TGG | + | chr2_1:17801073-17801092 | None:intergenic | 45.0% | |
| GAGAGGCAACATCTTCTTCA+AGG | + | chr2_1:17801219-17801238 | None:intergenic | 45.0% | |
| GATGTTGCCTCTCAAACTAC+TGG | - | chr2_1:17801226-17801245 | Msa0198980:intron | 45.0% | |
| GCTGTCATTGATGCATCGAA+CGG | + | chr2_1:17801785-17801804 | None:intergenic | 45.0% | |
| ATCTCACGCCTTGAATGATC+TGG | - | chr2_1:17801933-17801952 | Msa0198980:CDS | 45.0% | |
| TATTGTCACTCGTGCAGAGA+AGG | - | chr2_1:17801984-17802003 | Msa0198980:CDS | 45.0% | |
| TCTGTTGCTAGGAAGACATG+GGG | - | chr2_1:17802063-17802082 | Msa0198980:five_prime_UTR | 45.0% | |
| !! | TGGAAGTGTTAAGAGTGGGG+GGG | + | chr2_1:17796112-17796131 | None:intergenic | 50.0% |
| CCCCACTCTTAACACTTCCA+TGG | - | chr2_1:17796112-17796131 | Msa0198980:CDS | 50.0% | |
| TGGCTACTGATAGAAGCCGA+GGG | + | chr2_1:17796148-17796167 | None:intergenic | 50.0% | |
| CAAGGAGCTTCCAGAGGAAT+CGG | - | chr2_1:17796224-17796243 | Msa0198980:intron | 50.0% | |
| !! | GGAAGCACTGACACAGACAT+TGG | - | chr2_1:17796374-17796393 | Msa0198980:CDS | 50.0% |
| ATTACTGCTGCCCTCTTCCT+TGG | - | chr2_1:17796986-17797005 | Msa0198980:CDS | 50.0% | |
| ATCTTAACCTTCCGGCACCA+AGG | + | chr2_1:17797006-17797025 | None:intergenic | 50.0% | |
| ! | GCGGCCTTTTCTATCAAGAC+TGG | - | chr2_1:17797532-17797551 | Msa0198980:intron | 50.0% |
| !! | ATACCTGAAGTGCTGCAACC+AGG | - | chr2_1:17797776-17797795 | Msa0198980:intron | 50.0% |
| TTACCTGGTTGCAGCACTTC+AGG | + | chr2_1:17797782-17797801 | None:intergenic | 50.0% | |
| !!! | GTTTTTAGTGCGTGCAAGCG+GGG | + | chr2_1:17797868-17797887 | None:intergenic | 50.0% |
| TAATGCCGTCGGTCCTATCT+TGG | - | chr2_1:17798140-17798159 | Msa0198980:intron | 50.0% | |
| TGGCCTCTTCTTAAAGCTGG+AGG | - | chr2_1:17798343-17798362 | Msa0198980:intron | 50.0% | |
| !! | CCACCTCCAGCTTTAAGAAG+AGG | + | chr2_1:17798349-17798368 | None:intergenic | 50.0% |
| CCTCTTCTTAAAGCTGGAGG+TGG | - | chr2_1:17798346-17798365 | Msa0198980:intron | 50.0% | |
| CTTAAAGCTGGAGGTGGCAT+TGG | - | chr2_1:17798352-17798371 | Msa0198980:intron | 50.0% | |
| GGAAAGAAGTGGTGCAGTTG+TGG | - | chr2_1:17798378-17798397 | Msa0198980:intron | 50.0% | |
| ATTGGCGATAATCGTCTCGG+GGG | - | chr2_1:17798427-17798446 | Msa0198980:intron | 50.0% | |
| ! | TCGGGGGTTGGCATTCATAT+CGG | - | chr2_1:17798443-17798462 | Msa0198980:intron | 50.0% |
| GTTGGAGTTTGCGAGGAAGA+AGG | - | chr2_1:17798821-17798840 | Msa0198980:intron | 50.0% | |
| GGCAAGTTCTTTGCTTGGGA+TGG | - | chr2_1:17798999-17799018 | Msa0198980:intron | 50.0% | |
| TTAGAGTCGATCAAACCCGG+TGG | - | chr2_1:17799351-17799370 | Msa0198980:intron | 50.0% | |
| TAGAGTCGATCAAACCCGGT+GGG | - | chr2_1:17799352-17799371 | Msa0198980:intron | 50.0% | |
| GGGACAATCAGTTTGAACGG+TGG | - | chr2_1:17799372-17799391 | Msa0198980:intron | 50.0% | |
| CAGCCAAAGATACTTGGCCA+AGG | - | chr2_1:17801801-17801820 | Msa0198980:intron | 50.0% | |
| TCGTGCAGAGAAGGACTTGA+AGG | - | chr2_1:17801993-17802012 | Msa0198980:CDS | 50.0% | |
| AAGTGTTAAGAGTGGGGGGG+TGG | + | chr2_1:17796109-17796128 | None:intergenic | 55.0% | |
| GGCTACTGATAGAAGCCGAG+GGG | + | chr2_1:17796147-17796166 | None:intergenic | 55.0% | |
| CTGGCTACTGATAGAAGCCG+AGG | + | chr2_1:17796149-17796168 | None:intergenic | 55.0% | |
| GGAAGAGGGCAGCAGTAATC+TGG | + | chr2_1:17796985-17797004 | None:intergenic | 55.0% | |
| ! | GGCATTGGGACGGAAAGAAG+TGG | - | chr2_1:17798367-17798386 | Msa0198980:intron | 55.0% |
| CGATCTCGTTGGAGTTTGCG+AGG | - | chr2_1:17798814-17798833 | Msa0198980:intron | 55.0% | |
| CCATGGCTTCACGTTCCCCT+CGG | - | chr2_1:17796129-17796148 | Msa0198980:CDS | 60.0% | |
| TCTATACCACCGGCACGTGC+CGG | + | chr2_1:17796418-17796437 | None:intergenic | 60.0% | |
| CCTTCCGGCACCAAGGAAGA+GGG | + | chr2_1:17796999-17797018 | None:intergenic | 60.0% | |
| ACCTTCCGGCACCAAGGAAG+AGG | + | chr2_1:17797000-17797019 | None:intergenic | 60.0% | |
| TTTAGTGCGTGCAAGCGGGG+TGG | + | chr2_1:17797865-17797884 | None:intergenic | 60.0% | |
| ! | AGCTGGAGGTGGCATTGGGA+CGG | - | chr2_1:17798357-17798376 | Msa0198980:intron | 60.0% |
| GCGATAATCGTCTCGGGGGT+TGG | - | chr2_1:17798431-17798450 | Msa0198980:intron | 60.0% | |
| CCGAGGGGAACGTGAAGCCA+TGG | + | chr2_1:17796132-17796151 | None:intergenic | 65.0% | |
| TTGTGGACACCGGCACGTGC+CGG | - | chr2_1:17796406-17796425 | Msa0198980:intron | 65.0% | |
| ! | GCTGCCCTCTTCCTTGGTGC+CGG | - | chr2_1:17796992-17797011 | Msa0198980:CDS | 65.0% |
| !! | CCCTCTTCCTTGGTGCCGGA+AGG | - | chr2_1:17796996-17797015 | Msa0198980:CDS | 65.0% |
| TGGACACCGGCACGTGCCGG+TGG | - | chr2_1:17796409-17796428 | Msa0198980:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 17796004 | 17802128 | 17796004 | ID=Msa0198980;Name=Msa0198980 |
| chr2_1 | mRNA | 17796004 | 17802128 | 17796004 | ID=Msa0198980-mRNA-1;Parent=Msa0198980;Name=Msa0198980-mRNA-1;_AED=0.25;_eAED=0.25;_QI=76|0.5|0.36|1|0.8|0.81|11|0|565 |
| chr2_1 | exon | 17796004 | 17796204 | 17796004 | ID=Msa0198980-mRNA-1:exon:7593;Parent=Msa0198980-mRNA-1 |
| chr2_1 | exon | 17796310 | 17796399 | 17796310 | ID=Msa0198980-mRNA-1:exon:7592;Parent=Msa0198980-mRNA-1 |
| chr2_1 | exon | 17796544 | 17796756 | 17796544 | ID=Msa0198980-mRNA-1:exon:7591;Parent=Msa0198980-mRNA-1 |
| chr2_1 | exon | 17796871 | 17797089 | 17796871 | ID=Msa0198980-mRNA-1:exon:7590;Parent=Msa0198980-mRNA-1 |
| chr2_1 | exon | 17797220 | 17797365 | 17797220 | ID=Msa0198980-mRNA-1:exon:7589;Parent=Msa0198980-mRNA-1 |
| chr2_1 | exon | 17799096 | 17799289 | 17799096 | ID=Msa0198980-mRNA-1:exon:7588;Parent=Msa0198980-mRNA-1 |
| chr2_1 | exon | 17799668 | 17799795 | 17799668 | ID=Msa0198980-mRNA-1:exon:7587;Parent=Msa0198980-mRNA-1 |
| chr2_1 | exon | 17799962 | 17800044 | 17799962 | ID=Msa0198980-mRNA-1:exon:7586;Parent=Msa0198980-mRNA-1 |
| chr2_1 | exon | 17800335 | 17800428 | 17800335 | ID=Msa0198980-mRNA-1:exon:7585;Parent=Msa0198980-mRNA-1 |
| chr2_1 | exon | 17801506 | 17801658 | 17801506 | ID=Msa0198980-mRNA-1:exon:7584;Parent=Msa0198980-mRNA-1 |
| chr2_1 | exon | 17801876 | 17802128 | 17801876 | ID=Msa0198980-mRNA-1:exon:7583;Parent=Msa0198980-mRNA-1 |
| chr2_1 | five_prime_UTR | 17802053 | 17802128 | 17802053 | ID=Msa0198980-mRNA-1:five_prime_utr;Parent=Msa0198980-mRNA-1 |
| chr2_1 | CDS | 17801876 | 17802052 | 17801876 | ID=Msa0198980-mRNA-1:cds;Parent=Msa0198980-mRNA-1 |
| chr2_1 | CDS | 17801506 | 17801658 | 17801506 | ID=Msa0198980-mRNA-1:cds;Parent=Msa0198980-mRNA-1 |
| chr2_1 | CDS | 17800335 | 17800428 | 17800335 | ID=Msa0198980-mRNA-1:cds;Parent=Msa0198980-mRNA-1 |
| chr2_1 | CDS | 17799962 | 17800044 | 17799962 | ID=Msa0198980-mRNA-1:cds;Parent=Msa0198980-mRNA-1 |
| chr2_1 | CDS | 17799668 | 17799795 | 17799668 | ID=Msa0198980-mRNA-1:cds;Parent=Msa0198980-mRNA-1 |
| chr2_1 | CDS | 17799096 | 17799289 | 17799096 | ID=Msa0198980-mRNA-1:cds;Parent=Msa0198980-mRNA-1 |
| chr2_1 | CDS | 17797220 | 17797365 | 17797220 | ID=Msa0198980-mRNA-1:cds;Parent=Msa0198980-mRNA-1 |
| chr2_1 | CDS | 17796871 | 17797089 | 17796871 | ID=Msa0198980-mRNA-1:cds;Parent=Msa0198980-mRNA-1 |
| chr2_1 | CDS | 17796544 | 17796756 | 17796544 | ID=Msa0198980-mRNA-1:cds;Parent=Msa0198980-mRNA-1 |
| chr2_1 | CDS | 17796310 | 17796399 | 17796310 | ID=Msa0198980-mRNA-1:cds;Parent=Msa0198980-mRNA-1 |
| chr2_1 | CDS | 17796004 | 17796204 | 17796004 | ID=Msa0198980-mRNA-1:cds;Parent=Msa0198980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
