AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0025340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0025340 MtrunA17_Chr1g0179811 97.268 549 3 1 3 551 5 541 0.0 1093
Msa0025340 MtrunA17_Chr0c19g0493771 50.535 467 214 6 87 551 199 650 6.55e-159 469
Msa0025340 MtrunA17_Chr5g0396521 43.750 512 235 12 75 549 75 570 1.86e-134 402
Msa0025340 MtrunA17_Chr7g0248991 49.326 371 171 6 118 487 13 367 3.16e-118 353
Msa0025340 MtrunA17_Chr7g0215181 28.601 479 292 15 80 546 66 506 1.83e-44 164
Msa0025340 MtrunA17_Chr6g0457421 28.942 501 296 19 64 546 46 504 6.96e-41 154
Msa0025340 MtrunA17_Chr2g0313821 26.240 484 309 11 80 548 65 515 5.82e-39 149
Msa0025340 MtrunA17_Chr8g0351401 25.751 466 299 11 100 542 62 503 4.35e-38 147
Msa0025340 MtrunA17_Chr2g0313831 26.106 452 280 13 115 548 100 515 4.75e-38 147
Msa0025340 MtrunA17_Chr2g0307291 27.187 423 259 12 115 522 103 491 2.32e-37 145
Msa0025340 MtrunA17_Chr2g0313771 27.122 483 309 14 73 544 68 518 2.53e-37 144
Msa0025340 MtrunA17_Chr1g0193811 25.821 457 299 15 97 542 82 509 3.85e-37 144
Msa0025340 MtrunA17_Chr8g0351311 27.451 459 290 12 110 549 78 512 6.80e-37 143
Msa0025340 MtrunA17_Chr2g0313751 27.078 421 266 11 115 524 128 518 1.31e-36 143
Msa0025340 MtrunA17_Chr5g0446131 24.941 421 275 11 115 524 99 489 1.45e-36 142
Msa0025340 MtrunA17_Chr8g0351421 26.509 464 293 12 103 542 64 503 2.15e-36 142
Msa0025340 MtrunA17_Chr8g0351441 25.546 458 294 11 108 542 69 502 4.06e-36 141
Msa0025340 MtrunA17_Chr2g0313801 28.043 460 261 16 115 548 100 515 1.05e-35 140
Msa0025340 MtrunA17_Chr8g0354531 26.623 462 291 11 94 541 210 637 1.11e-35 141
Msa0025340 MtrunA17_Chr8g0354511 25.919 517 321 13 54 541 33 516 1.45e-35 139
Msa0025340 MtrunA17_Chr1g0204271 27.826 460 291 15 110 551 72 508 2.17e-35 139
Msa0025340 MtrunA17_Chr8g0351391 26.580 459 293 12 110 549 78 511 2.24e-35 139
Msa0025340 MtrunA17_Chr2g0313761 26.525 377 252 8 150 522 129 484 2.62e-35 139
Msa0025340 MtrunA17_Chr8g0351461 26.201 458 291 12 108 542 69 502 5.84e-35 137
Msa0025340 MtrunA17_Chr8g0354571 25.145 517 325 13 54 541 33 516 8.41e-35 137
Msa0025340 MtrunA17_Chr4g0067191 25.309 486 305 11 102 549 50 515 1.14e-34 137
Msa0025340 MtrunA17_Chr2g0307301 27.896 423 256 14 115 522 103 491 4.15e-34 135
Msa0025340 MtrunA17_Chr2g0313791 26.364 440 289 14 115 548 100 510 1.31e-33 134
Msa0025340 MtrunA17_Chr2g0288661 27.400 427 275 14 106 524 94 493 2.45e-33 133
Msa0025340 MtrunA17_Chr2g0313781 25.257 487 322 14 80 548 65 527 7.82e-33 132
Msa0025340 MtrunA17_Chr5g0445441 27.056 462 294 13 84 531 89 521 4.90e-32 129
Msa0025340 MtrunA17_Chr5g0403351 24.405 504 320 17 59 533 20 491 1.14e-31 128
Msa0025340 MtrunA17_Chr2g0313811 25.301 498 308 15 80 548 65 527 3.32e-31 127
Msa0025340 MtrunA17_Chr5g0446151 26.326 509 309 17 63 544 27 496 5.15e-31 126
Msa0025340 MtrunA17_Chr3g0101691 26.587 504 309 21 69 544 30 500 2.62e-30 124
Msa0025340 MtrunA17_Chr7g0255131 25.499 451 288 14 120 549 85 508 6.58e-30 123
Msa0025340 MtrunA17_Chr4g0038271 24.082 490 302 18 99 549 102 560 7.41e-30 123
Msa0025340 MtrunA17_Chr4g0014051 26.549 452 297 13 105 548 103 527 1.61e-29 122
Msa0025340 MtrunA17_Chr5g0446161 25.692 506 311 17 65 544 29 495 4.11e-29 120
Msa0025340 MtrunA17_Chr5g0445381 27.419 434 275 12 100 522 95 499 5.59e-29 120
Msa0025340 MtrunA17_Chr4g0063221 25.688 436 282 15 102 525 90 495 6.00e-29 120
Msa0025340 MtrunA17_Chr4g0058281 25.427 468 310 11 76 529 45 487 6.76e-29 120
Msa0025340 MtrunA17_Chr1g0164321 23.568 454 309 11 118 549 110 547 8.72e-29 120
Msa0025340 MtrunA17_Chr1g0184421 26.374 455 283 19 115 551 82 502 9.78e-29 119
Msa0025340 MtrunA17_Chr7g0227281 25.499 451 286 18 118 549 75 494 1.19e-28 119
Msa0025340 MtrunA17_Chr7g0227291 24.890 454 285 16 118 549 75 494 1.38e-28 119
Msa0025340 MtrunA17_Chr3g0101711 24.600 500 316 14 72 543 32 498 3.55e-28 118
Msa0025340 MtrunA17_Chr4g0076161 25.586 512 321 16 60 544 20 498 4.85e-28 117
Msa0025340 MtrunA17_Chr1g0184461 25.813 461 290 19 109 549 76 504 5.14e-28 117
Msa0025340 MtrunA17_Chr3g0101571 25.902 471 291 14 74 522 33 467 9.14e-28 116
Msa0025340 MtrunA17_Chr5g0445461 26.667 450 281 12 99 531 63 480 1.24e-27 116
Msa0025340 MtrunA17_Chr3g0119681 23.176 466 302 15 115 551 81 519 1.77e-27 116
Msa0025340 MtrunA17_Chr8g0339331 24.115 452 301 14 104 536 70 498 6.76e-27 114
Msa0025340 MtrunA17_Chr5g0431511 24.949 489 319 12 84 551 43 504 7.55e-27 114
Msa0025340 MtrunA17_Chr4g0058231 22.961 466 289 13 105 537 58 486 1.02e-26 113
Msa0025340 MtrunA17_Chr6g0463801 24.254 503 329 16 62 544 22 492 1.04e-26 113
Msa0025340 MtrunA17_Chr6g0458561 31.771 192 128 3 347 536 321 511 1.11e-26 114
Msa0025340 MtrunA17_Chr5g0403321 24.635 479 325 16 74 537 31 488 1.20e-26 113
Msa0025340 MtrunA17_Chr1g0163491 24.390 451 302 14 118 549 91 521 1.23e-26 113
Msa0025340 MtrunA17_Chr5g0445451 28.416 461 268 19 84 522 48 468 1.46e-26 113
Msa0025340 MtrunA17_Chr1g0154731 23.529 442 274 14 101 524 83 478 1.69e-26 113
Msa0025340 MtrunA17_Chr3g0116741 26.770 452 284 17 105 537 81 504 2.48e-26 112
Msa0025340 MtrunA17_Chr6g0449341 24.078 461 315 15 107 549 120 563 4.51e-26 112
Msa0025340 MtrunA17_Chr6g0449381 23.026 456 298 15 118 549 79 505 5.45e-26 111
Msa0025340 MtrunA17_Chr6g0449331 23.179 453 307 11 120 549 81 515 5.57e-26 111
Msa0025340 MtrunA17_Chr5g0431671 26.588 425 279 12 105 522 71 469 5.73e-26 111
Msa0025340 MtrunA17_Chr4g0058211 34.536 194 109 5 354 537 19 204 6.63e-26 105
Msa0025340 MtrunA17_Chr5g0403331 27.015 459 283 16 99 533 62 492 7.38e-26 111
Msa0025340 MtrunA17_Chr4g0058191 25.442 452 288 15 105 537 55 476 9.89e-26 110
Msa0025340 MtrunA17_Chr1g0163391 24.396 455 293 16 118 549 76 502 1.04e-25 110
Msa0025340 MtrunA17_Chr3g0101651 25.352 497 318 18 72 544 33 500 1.27e-25 110
Msa0025340 MtrunA17_Chr7g0225531 22.958 453 310 13 115 551 84 513 1.33e-25 110
Msa0025340 MtrunA17_Chr1g0163351 23.831 449 303 13 120 549 77 505 1.36e-25 110
Msa0025340 MtrunA17_Chr7g0262111 26.577 444 267 15 97 524 80 480 1.39e-25 110
Msa0025340 MtrunA17_Chr5g0431641 25.503 447 299 10 84 522 48 468 1.54e-25 110
Msa0025340 MtrunA17_Chr2g0310381 25.996 477 294 18 91 542 44 486 1.84e-25 109
Msa0025340 MtrunA17_Chr4g0058201 24.174 484 299 15 76 532 27 469 1.96e-25 109
Msa0025340 MtrunA17_Chr1g0183611 24.641 418 261 14 133 523 9 399 1.97e-25 108
Msa0025340 MtrunA17_Chr4g0004481 24.887 442 282 15 120 542 75 485 2.17e-25 109
Msa0025340 MtrunA17_Chr1g0163211 22.669 472 309 15 103 549 61 501 2.18e-25 109
Msa0025340 MtrunA17_Chr3g0101731 24.034 466 310 14 73 522 32 469 2.20e-25 109
Msa0025340 MtrunA17_Chr1g0176831 23.413 504 342 14 36 522 19 495 2.83e-25 109
Msa0025340 MtrunA17_Chr8g0364081 25.541 462 306 16 82 525 76 517 4.17e-25 109
Msa0025340 MtrunA17_Chr2g0321171 25.282 443 290 13 118 549 86 498 5.12e-25 108
Msa0025340 MtrunA17_Chr5g0445421 24.413 426 268 9 104 522 143 521 5.78e-25 108
Msa0025340 MtrunA17_Chr8g0348751 24.889 450 295 15 121 549 83 510 6.60e-25 108
Msa0025340 MtrunA17_Chr1g0163281 21.941 474 316 15 102 549 74 519 7.29e-25 108
Msa0025340 MtrunA17_Chr5g0431501 23.124 493 323 14 84 551 43 504 1.02e-24 107
Msa0025340 MtrunA17_Chr5g0431461 23.124 493 323 14 84 551 43 504 1.02e-24 107
Msa0025340 MtrunA17_Chr3g0101661 24.547 497 327 18 69 544 30 499 1.12e-24 107
Msa0025340 MtrunA17_Chr4g0024771 24.945 453 298 11 104 542 69 493 1.55e-24 107
Msa0025340 MtrunA17_Chr4g0047691 25.442 452 292 15 104 542 81 500 1.95e-24 107
Msa0025340 MtrunA17_Chr2g0310391 24.612 451 294 12 91 525 44 464 1.99e-24 106
Msa0025340 MtrunA17_Chr6g0472311 30.769 260 148 8 295 537 261 505 2.64e-24 106
Msa0025340 MtrunA17_Chr8g0380501 25.821 457 278 19 118 549 71 491 3.65e-24 105
Msa0025340 MtrunA17_Chr6g0463791 24.569 464 299 16 104 548 67 498 3.93e-24 105
Msa0025340 MtrunA17_Chr5g0445531 26.742 445 264 13 99 522 64 467 3.99e-24 105
Msa0025340 MtrunA17_Chr6g0472221 21.930 456 306 12 102 542 99 519 4.99e-24 105
Msa0025340 MtrunA17_Chr1g0162811 23.861 461 295 14 106 544 69 495 5.34e-24 105
Msa0025340 MtrunA17_Chr4g0004601 24.771 436 283 14 99 522 102 504 5.88e-24 105
Msa0025340 MtrunA17_Chr4g0047641 28.102 274 176 7 276 537 240 504 6.23e-24 105
Msa0025340 MtrunA17_Chr8g0354541 35.260 173 108 4 370 541 1 170 8.23e-24 98.6
Msa0025340 MtrunA17_Chr3g0101621 24.750 501 319 21 67 544 21 486 9.35e-24 104
Msa0025340 MtrunA17_Chr8g0387001 23.318 446 302 12 121 549 83 505 9.47e-24 104
Msa0025340 MtrunA17_Chr7g0235261 25.056 443 283 14 94 522 76 483 1.23e-23 104
Msa0025340 MtrunA17_Chr3g0101631 24.111 506 326 20 63 544 20 491 1.88e-23 103
Msa0025340 MtrunA17_Chr1g0174481 23.926 489 332 17 59 530 13 478 1.99e-23 103
Msa0025340 MtrunA17_Chr2g0304871 25.551 454 314 11 96 540 62 500 2.09e-23 103
Msa0025340 MtrunA17_Chr4g0011901 24.678 466 289 16 106 544 61 491 2.84e-23 103
Msa0025340 MtrunA17_Chr8g0361471 24.731 465 312 14 72 522 29 469 3.52e-23 103
Msa0025340 MtrunA17_Chr7g0258211 23.276 464 288 15 104 536 68 494 3.89e-23 102
Msa0025340 MtrunA17_Chr6g0451641 23.297 455 299 13 104 531 70 501 4.60e-23 102
Msa0025340 MtrunA17_Chr1g0163501 24.000 450 298 18 119 549 75 499 4.89e-23 102
Msa0025340 MtrunA17_Chr4g0047631 25.629 437 278 14 104 525 78 482 4.96e-23 102
Msa0025340 MtrunA17_Chr6g0484811 26.027 438 280 16 104 525 66 475 5.10e-23 102
Msa0025340 MtrunA17_Chr1g0163421 23.516 455 302 14 118 549 109 540 5.11e-23 102
Msa0025340 MtrunA17_Chr4g0035921 25.342 438 284 14 105 522 67 481 5.69e-23 102
Msa0025340 MtrunA17_Chr6g0463621 30.653 199 129 6 354 544 1 198 5.70e-23 97.1
Msa0025340 MtrunA17_Chr3g0101601 23.554 484 322 16 78 544 40 492 6.46e-23 102
Msa0025340 MtrunA17_Chr3g0101701 24.846 487 309 18 76 536 37 492 6.67e-23 102
Msa0025340 MtrunA17_Chr1g0174471 23.874 444 304 12 101 530 76 499 6.81e-23 102
Msa0025340 MtrunA17_Chr6g0449351 23.297 455 298 15 118 550 39 464 7.38e-23 101
Msa0025340 MtrunA17_Chr2g0280261 26.369 493 315 18 70 544 27 489 7.45e-23 102
Msa0025340 MtrunA17_Chr3g0116681 25.355 493 325 16 67 542 30 496 9.85e-23 101
Msa0025340 MtrunA17_Chr6g0449361 22.788 452 302 13 118 549 79 503 1.04e-22 101
Msa0025340 MtrunA17_Chr4g0030701 24.444 450 304 16 104 536 64 494 1.23e-22 101
Msa0025340 MtrunA17_Chr5g0395321 25.059 427 276 13 106 522 73 465 1.34e-22 101
Msa0025340 MtrunA17_Chr6g0465511 24.946 465 311 14 72 522 29 469 1.65e-22 100
Msa0025340 MtrunA17_Chr4g0011981 26.124 467 277 16 106 542 61 489 2.38e-22 100
Msa0025340 MtrunA17_Chr3g0101581 24.481 482 307 16 68 527 28 474 2.77e-22 100
Msa0025340 MtrunA17_Chr6g0466331 24.946 465 311 14 72 522 29 469 2.83e-22 100
Msa0025340 MtrunA17_Chr5g0446101 30.093 216 137 6 327 531 81 293 3.21e-22 97.4
Msa0025340 MtrunA17_Chr1g0163451 22.458 472 319 15 103 549 75 524 3.81e-22 100
Msa0025340 MtrunA17_Chr1g0174441 23.624 436 307 10 105 530 86 505 3.85e-22 100
Msa0025340 MtrunA17_Chr2g0314721 23.125 480 317 14 70 529 37 484 3.95e-22 99.8
Msa0025340 MtrunA17_Chr3g0101611 24.894 470 307 16 71 523 32 472 5.49e-22 99.4
Msa0025340 MtrunA17_Chr1g0171041 23.503 451 304 15 120 549 76 506 6.09e-22 99.4
Msa0025340 MtrunA17_Chr3g0128461 23.494 498 332 17 57 544 61 519 6.36e-22 99.4
Msa0025340 MtrunA17_Chr5g0429651 23.871 465 302 13 108 549 73 508 6.86e-22 99.0
Msa0025340 MtrunA17_Chr3g0101721 24.528 477 297 16 72 522 32 471 6.88e-22 99.0
Msa0025340 MtrunA17_Chr5g0403451 27.935 247 146 4 333 549 35 279 7.37e-22 95.9
Msa0025340 MtrunA17_Chr1g0203141 20.899 445 297 14 97 524 84 490 7.46e-22 99.0
Msa0025340 MtrunA17_Chr5g0419691 24.733 469 285 16 84 525 39 466 8.93e-22 98.6
Msa0025340 MtrunA17_Chr8g0362701 24.769 432 278 14 105 516 65 469 9.67e-22 98.6
Msa0025340 MtrunA17_Chr4g0011921 25.895 475 290 18 95 542 50 489 1.06e-21 98.6
Msa0025340 MtrunA17_Chr7g0254641 24.893 466 308 16 68 512 28 472 1.19e-21 98.6
Msa0025340 MtrunA17_Chr5g0419451 24.885 434 261 15 112 523 97 487 1.76e-21 97.8
Msa0025340 MtrunA17_Chr4g0011851 32.338 201 120 6 352 542 14 208 2.13e-21 92.8
Msa0025340 MtrunA17_Chr4g0011961 22.650 468 309 12 97 542 52 488 2.17e-21 97.4
Msa0025340 MtrunA17_Chr7g0235551 23.788 433 295 11 99 516 58 470 2.22e-21 97.4
Msa0025340 MtrunA17_Chr8g0382901 24.711 433 276 14 99 522 52 443 2.43e-21 98.6
Msa0025340 MtrunA17_Chr8g0382901 24.831 443 268 16 104 522 521 922 1.42e-20 96.3
Msa0025340 MtrunA17_Chr5g0405001 25.342 438 282 16 105 525 74 483 2.44e-21 97.4
Msa0025340 MtrunA17_Chr6g0451751 22.799 443 285 10 104 516 72 487 2.69e-21 97.4
Msa0025340 MtrunA17_Chr1g0210091 23.671 414 279 13 106 504 97 488 3.07e-21 97.4
Msa0025340 MtrunA17_Chr4g0056951 25.891 421 264 16 106 509 75 464 3.12e-21 97.1
Msa0025340 MtrunA17_Chr1g0163461 22.414 464 321 14 107 549 74 519 4.22e-21 96.7
Msa0025340 MtrunA17_Chr6g0451741 23.025 443 287 9 104 516 91 509 4.35e-21 97.1
Msa0025340 MtrunA17_Chr2g0334021 23.467 473 302 17 101 549 62 498 5.05e-21 96.3
Msa0025340 MtrunA17_Chr1g0203151 21.064 451 289 14 97 524 80 486 5.12e-21 96.7
Msa0025340 MtrunA17_Chr4g0011871 24.593 492 298 17 84 542 39 490 5.51e-21 96.3
Msa0025340 MtrunA17_Chr4g0026941 24.944 449 293 14 121 549 115 539 7.03e-21 96.3
Msa0025340 MtrunA17_Chr6g0451681 30.645 186 128 1 347 531 270 455 7.67e-21 95.9
Msa0025340 MtrunA17_Chr5g0431591 28.897 263 169 5 267 522 35 286 8.87e-21 93.6
Msa0025340 MtrunA17_Chr8g0380471 27.241 290 181 8 267 547 206 474 1.00e-20 95.5
Msa0025340 MtrunA17_Chr1g0174461 22.072 444 312 12 105 535 66 488 1.01e-20 95.5
Msa0025340 MtrunA17_Chr3g0101671 25.216 464 303 17 76 522 37 473 1.27e-20 95.1
Msa0025340 MtrunA17_Chr1g0163401 23.491 464 296 19 118 549 76 512 1.35e-20 95.1
Msa0025340 MtrunA17_Chr4g0052861 31.492 181 116 2 352 531 297 470 1.57e-20 94.7
Msa0025340 MtrunA17_Chr1g0164211 32.203 177 109 5 352 523 293 463 1.78e-20 94.7
Msa0025340 MtrunA17_Chr5g0402981 31.792 173 106 4 366 531 4 171 1.81e-20 89.7
Msa0025340 MtrunA17_Chr1g0174451 23.820 445 299 12 106 534 68 488 2.11e-20 94.7
Msa0025340 MtrunA17_Chr1g0162801 24.176 455 304 13 106 544 69 498 2.24e-20 94.4
Msa0025340 MtrunA17_Chr1g0205361 23.908 435 293 13 99 522 58 465 2.45e-20 94.4
Msa0025340 MtrunA17_Chr2g0310351 29.744 195 129 4 354 542 1 193 2.60e-20 89.4
Msa0025340 MtrunA17_Chr8g0356001 24.744 489 298 17 69 528 33 480 2.61e-20 94.4
Msa0025340 MtrunA17_Chr4g0011941 31.818 198 125 5 354 544 1 195 2.78e-20 89.4
Msa0025340 MtrunA17_Chr7g0246121 23.095 433 292 14 104 523 63 467 2.93e-20 94.0
Msa0025340 MtrunA17_Chr4g0047661 25.641 273 185 6 276 537 240 505 4.04e-20 93.6
Msa0025340 MtrunA17_Chr2g0314731 22.083 480 337 14 53 522 13 465 4.38e-20 93.6
Msa0025340 MtrunA17_Chr7g0218611 22.470 494 316 18 61 531 24 473 4.39e-20 93.6
Msa0025340 MtrunA17_Chr3g0082701 24.319 477 309 15 104 550 70 524 4.87e-20 93.6
Msa0025340 MtrunA17_Chr4g0058261 23.502 434 290 12 105 522 92 499 4.97e-20 93.6
Msa0025340 MtrunA17_Chr4g0057001 22.989 435 286 15 106 522 81 484 6.50e-20 93.2
Msa0025340 MtrunA17_Chr6g0484841 22.654 437 286 12 106 522 68 472 6.97e-20 92.8
Msa0025340 MtrunA17_Chr4g0008101 24.318 440 284 12 104 516 70 487 7.09e-20 93.2
Msa0025340 MtrunA17_Chr8g0390871 30.457 197 127 6 328 522 6 194 7.95e-20 88.6
Msa0025340 MtrunA17_Chr4g0020041 28.077 260 166 11 298 544 246 497 8.92e-20 92.8
Msa0025340 MtrunA17_Chr4g0039901 22.983 409 270 14 106 499 66 444 9.58e-20 92.4
Msa0025340 MtrunA17_Chr5g0430091 24.711 433 284 14 105 522 67 472 1.19e-19 92.4
Msa0025340 MtrunA17_Chr5g0430131 29.630 216 143 6 342 550 291 504 1.30e-19 92.0
Msa0025340 MtrunA17_Chr6g0451781 24.887 442 289 15 104 523 105 525 1.64e-19 92.0
Msa0025340 MtrunA17_Chr5g0432751 23.973 438 299 13 99 524 58 473 2.36e-19 91.3
Msa0025340 MtrunA17_Chr7g0255531 33.140 172 106 3 351 518 294 460 2.75e-19 91.3
Msa0025340 MtrunA17_Chr5g0430101 30.918 207 134 6 351 550 298 502 2.94e-19 90.9
Msa0025340 MtrunA17_Chr5g0430081 29.954 217 143 6 342 551 290 504 3.33e-19 90.9
Msa0025340 MtrunA17_Chr1g0167321 26.304 460 288 21 106 544 66 495 3.37e-19 90.9
Msa0025340 MtrunA17_Chr5g0406651 25.758 462 284 17 84 522 40 465 3.50e-19 90.9
Msa0025340 MtrunA17_Chr8g0372251 23.866 419 266 13 105 501 65 452 4.60e-19 90.5
Msa0025340 MtrunA17_Chr5g0395331 23.918 439 284 13 106 525 68 475 5.15e-19 90.1
Msa0025340 MtrunA17_Chr6g0451811 31.034 174 117 2 351 523 2 173 5.27e-19 85.9
Msa0025340 MtrunA17_Chr8g0339311 29.412 187 130 2 352 536 320 506 5.62e-19 90.1
Msa0025340 MtrunA17_Chr1g0163371 27.064 218 134 5 347 549 15 222 5.86e-19 85.9
Msa0025340 MtrunA17_Chr4g0046681 29.730 185 127 2 340 523 17 199 7.17e-19 86.3
Msa0025340 MtrunA17_Chr3g0101811 22.887 485 308 15 72 522 32 484 7.39e-19 89.7
Msa0025340 MtrunA17_Chr8g0388921 26.400 250 159 6 288 528 225 458 7.90e-19 89.4
Msa0025340 MtrunA17_Chr3g0104351 24.190 463 305 14 108 549 79 516 7.93e-19 89.7
Msa0025340 MtrunA17_Chr8g0362731 25.464 377 250 10 150 522 32 381 8.34e-19 89.0
Msa0025340 MtrunA17_Chr3g0101591 34.286 175 109 6 355 527 40 210 9.01e-19 85.9
Msa0025340 MtrunA17_Chr8g0344151 24.499 449 298 13 89 522 50 472 9.55e-19 89.4
Msa0025340 MtrunA17_Chr4g0076171 33.516 182 90 6 373 544 4 164 1.09e-18 83.6
Msa0025340 MtrunA17_Chr4g0039391 22.505 471 299 14 90 533 50 481 1.14e-18 89.4
Msa0025340 MtrunA17_Chr5g0401681 23.778 450 289 13 105 536 62 475 1.37e-18 89.0
Msa0025340 MtrunA17_Chr3g0086691 22.851 442 286 11 106 522 63 474 1.41e-18 89.0
Msa0025340 MtrunA17_Chr4g0011881 24.632 475 317 14 84 542 40 489 2.01e-18 88.2
Msa0025340 MtrunA17_Chr6g0479681 21.041 461 293 15 97 524 82 504 2.15e-18 88.6
Msa0025340 MtrunA17_Chr7g0258221 22.930 471 334 11 59 516 14 468 2.70e-18 88.2
Msa0025340 MtrunA17_Chr3g0086661 24.439 446 288 14 106 529 63 481 3.01e-18 87.8
Msa0025340 MtrunA17_Chr1g0160851 23.570 437 292 12 99 522 58 465 3.22e-18 87.8
Msa0025340 MtrunA17_Chr6g0466901 29.500 200 137 2 343 540 305 502 4.14e-18 87.4
Msa0025340 MtrunA17_Chr1g0174431 31.429 175 113 3 354 522 1 174 4.58e-18 83.2
Msa0025340 MtrunA17_Chr5g0395381 24.885 434 249 15 106 525 73 443 4.61e-18 87.0
Msa0025340 MtrunA17_Chr2g0293411 26.840 231 129 6 298 522 263 459 4.63e-18 87.0
Msa0025340 MtrunA17_Chr8g0369791 29.204 226 140 6 335 549 249 465 4.70e-18 87.0
Msa0025340 MtrunA17_Chr4g0030711 20.946 444 324 14 106 536 68 497 4.83e-18 87.4
Msa0025340 MtrunA17_Chr2g0293421 29.282 181 109 5 349 522 292 460 5.27e-18 87.0
Msa0025340 MtrunA17_Chr8g0390881 35.366 164 99 6 352 513 303 461 5.29e-18 87.0
Msa0025340 MtrunA17_Chr3g0101801 24.898 490 316 19 76 542 41 501 5.61e-18 87.0
Msa0025340 MtrunA17_Chr5g0430031 22.246 472 308 16 105 550 67 505 5.83e-18 87.0
Msa0025340 MtrunA17_Chr1g0163511 22.965 479 311 20 105 550 66 519 6.61e-18 87.0
Msa0025340 MtrunA17_Chr8g0344181 23.230 452 306 10 89 525 52 477 9.83e-18 86.3
Msa0025340 MtrunA17_Chr4g0061381 28.837 215 147 3 314 522 257 471 1.10e-17 86.3
Msa0025340 MtrunA17_Chr2g0296661 24.439 446 294 11 106 536 63 480 1.29e-17 85.9
Msa0025340 MtrunA17_Chr7g0224561 23.620 453 299 13 90 523 47 471 1.37e-17 85.9
Msa0025340 MtrunA17_Chr7g0248981 53.731 67 30 1 486 551 16 82 1.37e-17 79.0
Msa0025340 MtrunA17_Chr6g0466941 26.582 237 164 3 312 540 269 503 1.59e-17 85.9
Msa0025340 MtrunA17_Chr5g0430071 29.469 207 137 5 351 550 154 358 1.83e-17 84.3
Msa0025340 MtrunA17_Chr1g0178971 23.227 409 270 11 127 522 104 481 2.21e-17 85.1
Msa0025340 MtrunA17_Chr4g0053621 27.128 188 129 2 347 533 296 476 2.35e-17 85.1
Msa0025340 MtrunA17_Chr8g0346261 29.536 237 158 5 293 524 283 515 2.46e-17 85.1
Msa0025340 MtrunA17_Chr4g0052881 24.490 343 232 7 191 530 152 470 3.23e-17 84.7
Msa0025340 MtrunA17_Chr3g0084921 23.744 438 299 14 106 527 66 484 3.76e-17 84.3
Msa0025340 MtrunA17_Chr3g0101741 26.639 244 159 7 293 525 159 393 4.14e-17 84.0
Msa0025340 MtrunA17_Chr8g0344191 23.543 446 281 13 105 525 99 509 4.60e-17 84.3
Msa0025340 MtrunA17_Chr5g0445351 35.172 145 89 5 381 523 51 192 4.65e-17 80.5
Msa0025340 MtrunA17_Chr1g0204241 25.939 293 173 10 270 551 40 299 5.14e-17 82.0
Msa0025340 MtrunA17_Chr6g0451691 21.749 446 290 10 104 516 72 491 5.37e-17 84.0
Msa0025340 MtrunA17_Chr7g0218601 28.351 194 125 6 341 531 290 472 6.67e-17 83.6
Msa0025340 MtrunA17_Chr4g0046321 22.545 448 290 12 99 522 60 474 6.74e-17 83.6
Msa0025340 MtrunA17_Chr1g0197871 28.452 239 156 7 291 525 239 466 6.95e-17 83.6
Msa0025340 MtrunA17_Chr5g0401691 23.438 448 285 16 105 533 81 489 7.08e-17 83.6
Msa0025340 MtrunA17_Chr3g0094231 27.397 219 144 5 327 531 268 485 8.35e-17 83.6
Msa0025340 MtrunA17_Chr1g0197891 22.897 428 290 13 106 522 65 463 9.90e-17 83.2
Msa0025340 MtrunA17_Chr5g0403931 26.761 213 137 6 325 527 256 459 1.16e-16 82.8
Msa0025340 MtrunA17_Chr5g0443401 25.311 241 162 7 297 530 231 460 1.18e-16 82.8
Msa0025340 MtrunA17_Chr4g0046351 27.459 244 164 7 300 533 244 484 1.20e-16 82.8
Msa0025340 MtrunA17_Chr3g0094171 28.440 218 147 6 340 550 293 508 1.34e-16 82.8
Msa0025340 MtrunA17_Chr7g0214931 22.507 351 234 8 121 453 103 433 1.42e-16 82.4
Msa0025340 MtrunA17_Chr3g0086651 30.570 193 129 4 341 529 290 481 1.44e-16 82.8
Msa0025340 MtrunA17_Chr8g0351801 25.962 208 141 5 341 536 297 503 1.75e-16 82.4
Msa0025340 MtrunA17_Chr6g0451771 30.000 180 125 1 353 531 21 200 1.94e-16 79.0
Msa0025340 MtrunA17_Chr1g0197881 27.650 217 149 6 310 522 250 462 1.96e-16 82.0
Msa0025340 MtrunA17_Chr1g0197851 27.650 217 149 6 310 522 251 463 2.09e-16 82.0
Msa0025340 MtrunA17_Chr5g0443731 22.052 458 306 13 101 549 56 471 3.36e-16 81.3
Msa0025340 MtrunA17_Chr8g0362481 23.904 251 175 7 296 536 176 420 3.65e-16 80.9
Msa0025340 MtrunA17_Chr4g0046331 27.542 236 155 7 300 522 244 476 3.94e-16 81.3
Msa0025340 MtrunA17_Chr7g0265611 27.350 234 162 3 298 528 261 489 3.96e-16 81.3
Msa0025340 MtrunA17_Chr3g0113321 28.502 207 138 4 316 518 235 435 5.18e-16 80.9
Msa0025340 MtrunA17_Chr1g0164351 23.478 345 209 11 118 436 110 425 5.19e-16 80.5
Msa0025340 MtrunA17_Chr3g0101751 22.822 482 333 14 78 544 46 503 6.75e-16 80.5
Msa0025340 MtrunA17_Chr7g0246151 23.448 435 286 15 104 521 63 467 7.13e-16 80.5
Msa0025340 MtrunA17_Chr7g0224551 22.321 448 311 10 90 523 47 471 8.20e-16 80.5
Msa0025340 MtrunA17_Chr1g0156101 22.197 437 313 11 99 522 57 479 9.61e-16 80.1
Msa0025340 MtrunA17_Chr3g0101831 24.951 509 326 22 60 544 21 497 1.32e-15 79.7
Msa0025340 MtrunA17_Chr2g0296651 26.374 182 126 2 351 531 296 470 1.76e-15 79.3
Msa0025340 MtrunA17_Chr8g0355961 23.838 495 307 17 63 528 27 480 2.10e-15 79.0
Msa0025340 MtrunA17_Chr5g0445761 32.164 171 111 5 354 522 1 168 2.81e-15 75.1
Msa0025340 MtrunA17_Chr4g0017411 23.210 461 285 16 97 535 49 462 2.98e-15 78.6
Msa0025340 MtrunA17_Chr3g0101821 23.226 465 310 15 76 522 34 469 3.13e-15 78.6
Msa0025340 MtrunA17_Chr3g0101761 22.857 490 330 17 76 544 34 496 4.70e-15 77.8
Msa0025340 MtrunA17_Chr3g0107541 22.353 425 298 9 115 525 93 499 5.31e-15 77.8
Msa0025340 MtrunA17_Chr8g0334941 24.265 272 176 7 269 523 44 302 6.58e-15 76.3
Msa0025340 MtrunA17_Chr1g0200961 23.598 428 295 13 106 522 59 465 8.02e-15 77.0
Msa0025340 MtrunA17_Chr1g0198191 22.449 441 290 16 105 524 78 487 8.28e-15 77.0
Msa0025340 MtrunA17_Chr5g0408181 26.562 256 165 7 298 546 221 460 1.70e-14 75.9
Msa0025340 MtrunA17_Chr1g0213671 25.000 468 295 14 105 546 65 502 2.23e-14 75.9
Msa0025340 MtrunA17_Chr5g0430151 31.609 174 110 6 384 550 5 176 2.68e-14 71.2
Msa0025340 MtrunA17_Chr3g0107511 24.664 223 151 6 317 528 242 458 3.08e-14 75.1
Msa0025340 MtrunA17_Chr1g0207841 26.738 187 134 3 351 536 312 496 3.36e-14 75.5
Msa0025340 MtrunA17_Chr8g0377341 25.346 434 265 17 112 526 106 499 6.36e-14 74.3
Msa0025340 MtrunA17_Chr1g0205371 23.601 411 272 11 106 503 66 447 7.36e-14 73.9
Msa0025340 MtrunA17_Chr1g0160861 26.840 231 157 5 296 522 84 306 8.03e-14 72.8
Msa0025340 MtrunA17_Chr4g0046631 22.727 462 294 15 90 523 61 487 1.16e-13 73.6
Msa0025340 MtrunA17_Chr3g0117301 35.185 108 67 2 409 515 5 110 2.04e-13 67.0
Msa0025340 MtrunA17_Chr3g0105761 27.273 176 116 4 355 524 1 170 2.30e-13 69.3
Msa0025340 MtrunA17_Chr1g0164371 29.167 168 106 5 341 503 272 431 2.79e-13 72.4
Msa0025340 MtrunA17_Chr5g0430111 31.061 132 89 2 342 471 292 423 4.30e-13 71.2
Msa0025340 MtrunA17_Chr4g0052851 27.778 180 122 3 353 531 289 461 4.90e-13 71.6
Msa0025340 MtrunA17_Chr3g0116731 25.735 136 94 2 409 543 5 134 5.01e-13 66.6
Msa0025340 MtrunA17_Chr8g0357421 23.154 501 321 16 72 544 32 496 6.42e-13 71.2
Msa0025340 MtrunA17_Chr5g0400421 26.776 183 121 4 349 525 293 468 1.17e-12 70.5
Msa0025340 MtrunA17_Chr2g0314781 28.947 152 103 4 373 522 4 152 1.18e-12 66.6
Msa0025340 MtrunA17_Chr4g0046661 30.000 170 118 1 352 520 23 192 1.46e-12 67.4
Msa0025340 MtrunA17_Chr8g0370641 20.356 506 325 18 62 526 25 493 1.46e-12 70.1
Msa0025340 MtrunA17_Chr5g0423621 30.857 175 103 8 378 542 9 175 7.07e-12 64.3
Msa0025340 MtrunA17_Chr8g0357431 22.222 468 318 13 72 522 32 470 7.12e-12 67.8
Msa0025340 MtrunA17_Chr3g0141801 26.860 242 137 12 297 521 236 454 1.07e-11 67.4
Msa0025340 MtrunA17_Chr8g0370651 20.815 466 301 17 98 527 65 498 1.34e-11 67.0
Msa0025340 MtrunA17_Chr1g0153371 25.703 249 165 8 301 542 227 462 2.12e-11 66.2
Msa0025340 MtrunA17_Chr8g0387101 24.436 266 190 3 296 550 242 507 2.69e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0025340 AT3G53130.1 78.876 516 89 2 34 549 44 539 0.0 860
Msa0025340 AT1G31800.1 50.000 486 223 7 68 551 104 571 9.32e-160 468
Msa0025340 AT4G15110.1 43.539 503 233 10 87 551 91 580 5.28e-133 399
Msa0025340 AT3G14630.1 27.957 465 293 12 94 548 75 507 2.11e-41 156
Msa0025340 AT3G14630.2 27.957 465 293 12 94 548 130 562 3.24e-41 157
Msa0025340 AT2G44890.1 27.115 461 286 13 108 544 69 503 3.23e-40 153
Msa0025340 AT2G26710.1 28.989 445 283 13 102 541 91 507 2.40e-39 150
Msa0025340 AT3G14620.1 27.354 446 286 13 103 541 93 507 2.35e-38 148
Msa0025340 AT2G45510.1 26.419 458 293 11 108 544 69 503 1.15e-37 146
Msa0025340 AT3G14610.1 28.261 460 278 15 80 524 65 487 1.52e-36 142
Msa0025340 AT3G14680.1 26.651 439 289 9 115 548 101 511 2.00e-36 142
Msa0025340 AT2G44890.2 26.030 461 273 13 108 544 69 485 1.22e-34 137
Msa0025340 AT3G14690.1 27.609 460 277 15 97 541 86 504 2.43e-34 136
Msa0025340 AT4G39490.1 26.087 460 291 12 118 549 78 516 2.50e-34 136
Msa0025340 AT3G14690.2 27.533 454 285 14 97 541 121 539 3.09e-34 136
Msa0025340 AT1G57750.1 24.943 441 302 11 118 550 78 497 3.02e-33 133
Msa0025340 AT3G14640.1 27.489 462 288 15 100 548 86 513 4.07e-33 133
Msa0025340 AT3G14640.2 27.489 462 288 15 100 548 108 535 7.06e-33 132
Msa0025340 AT2G23180.1 25.000 488 313 15 85 549 55 512 7.59e-33 132
Msa0025340 AT5G52320.2 26.044 407 272 13 118 513 79 467 3.57e-32 130
Msa0025340 AT5G52320.1 24.036 441 307 12 118 548 79 501 3.95e-32 130
Msa0025340 AT3G14660.1 26.327 452 284 12 103 541 89 504 3.96e-32 130
Msa0025340 AT2G21910.1 24.609 447 305 12 118 549 77 506 4.23e-32 130
Msa0025340 AT1G24540.1 25.495 455 290 13 120 549 90 520 6.79e-32 129
Msa0025340 AT4G39480.1 24.839 467 291 12 115 549 75 513 1.20e-31 129
Msa0025340 AT1G65340.1 23.702 443 307 12 118 548 79 502 3.73e-31 127
Msa0025340 AT2G46960.2 25.115 434 278 12 101 520 87 487 4.17e-31 127
Msa0025340 AT5G38450.1 29.412 459 272 17 80 522 67 489 7.78e-31 126
Msa0025340 AT4G39500.1 25.490 459 303 15 107 549 31 466 7.85e-31 125
Msa0025340 AT1G75130.1 26.087 460 287 14 101 548 84 502 8.76e-31 126
Msa0025340 AT4G39500.2 25.490 459 303 15 107 549 81 516 1.17e-30 125
Msa0025340 AT3G14650.1 27.610 431 271 10 120 541 106 504 3.51e-30 124
Msa0025340 AT4G32170.1 24.444 450 309 13 115 549 70 503 7.12e-30 123
Msa0025340 AT4G27710.1 25.870 460 285 15 84 525 72 493 1.00e-29 123
Msa0025340 AT1G47620.1 26.637 443 289 15 124 549 92 515 1.97e-29 122
Msa0025340 AT5G23190.1 23.465 456 302 11 118 549 108 540 2.27e-29 122
Msa0025340 AT3G48310.1 26.465 495 313 17 71 547 26 487 8.10e-29 120
Msa0025340 AT1G34540.1 24.558 452 298 13 115 549 72 497 1.40e-28 119
Msa0025340 AT3G25180.1 25.956 497 309 15 63 533 25 488 2.31e-28 119
Msa0025340 AT1G69500.1 24.444 540 338 16 52 549 12 523 4.37e-28 118
Msa0025340 AT5G57260.1 26.237 465 301 15 99 544 54 495 4.61e-28 118
Msa0025340 AT5G52400.1 25.566 442 277 15 97 524 91 494 5.82e-28 118
Msa0025340 AT3G56630.1 25.870 460 283 18 115 549 72 498 1.25e-27 116
Msa0025340 AT4G39510.1 24.717 441 299 13 124 549 83 505 1.30e-27 117
Msa0025340 AT3G14660.2 35.323 201 126 4 342 541 161 358 1.91e-27 114
Msa0025340 AT5G02900.1 25.225 444 276 16 124 549 74 479 3.48e-27 115
Msa0025340 AT3G48520.1 25.330 454 289 17 115 549 77 499 2.12e-26 113
Msa0025340 AT2G46950.1 25.792 442 276 16 99 525 142 546 7.52e-26 112
Msa0025340 AT1G13140.1 21.882 457 303 12 121 549 94 524 1.51e-25 110
Msa0025340 AT1G67110.1 27.083 432 266 14 102 522 90 483 1.93e-25 110
Msa0025340 AT4G31970.1 31.933 238 150 5 325 551 282 518 1.95e-25 110
Msa0025340 AT5G63450.1 22.173 451 304 12 117 549 81 502 1.99e-25 110
Msa0025340 AT5G25140.1 25.272 459 296 15 69 509 21 450 2.37e-25 110
Msa0025340 AT5G63450.2 22.418 455 298 13 117 549 139 560 2.59e-25 110
Msa0025340 AT3G26310.1 23.555 467 307 15 99 544 54 491 2.81e-25 109
Msa0025340 AT3G26300.1 23.810 462 312 13 99 544 55 492 3.91e-25 109
Msa0025340 AT3G01900.1 23.542 463 291 14 109 549 69 490 4.52e-25 108
Msa0025340 AT5G24900.1 23.235 439 308 12 94 524 85 502 5.34e-25 109
Msa0025340 AT1G13140.2 21.445 443 296 10 121 549 94 498 6.48e-25 108
Msa0025340 AT2G46960.1 24.227 388 249 10 145 520 17 371 9.26e-25 107
Msa0025340 AT1G57750.2 26.064 376 247 10 118 481 78 434 1.05e-24 107
Msa0025340 AT5G24910.1 24.832 447 292 14 94 524 89 507 1.17e-24 108
Msa0025340 AT3G48320.1 25.458 491 315 15 71 543 26 483 1.33e-24 107
Msa0025340 AT4G31950.1 31.092 238 152 5 325 551 271 507 2.31e-24 107
Msa0025340 AT5G25120.1 25.159 473 301 14 70 522 22 461 4.69e-24 105
Msa0025340 AT4G12320.1 24.831 443 294 12 101 528 68 486 5.75e-24 105
Msa0025340 AT4G37400.1 28.511 235 166 2 298 531 236 469 6.68e-24 105
Msa0025340 AT4G31940.1 30.672 238 153 5 325 551 283 519 7.81e-24 105
Msa0025340 AT1G13150.1 23.644 461 290 16 121 549 87 517 1.02e-23 105
Msa0025340 AT4G37430.1 24.176 455 289 17 99 531 52 472 1.84e-23 104
Msa0025340 AT1G01600.1 25.490 459 284 16 121 549 83 513 2.09e-23 104
Msa0025340 AT3G48290.1 25.304 494 314 18 70 543 26 484 2.45e-23 103
Msa0025340 AT2G45550.1 25.110 454 303 11 106 543 69 501 3.19e-23 103
Msa0025340 AT3G26320.1 24.153 443 285 14 99 522 55 465 3.24e-23 103
Msa0025340 AT2G45560.1 24.229 454 307 11 106 543 69 501 3.39e-23 103
Msa0025340 AT2G25160.1 24.678 466 311 13 106 550 67 513 4.61e-23 103
Msa0025340 AT2G45970.1 23.767 446 305 11 121 549 83 510 1.21e-22 102
Msa0025340 AT5G08250.1 21.930 456 308 15 118 549 47 478 1.28e-22 101
Msa0025340 AT5G08250.2 22.658 459 301 15 118 549 109 540 2.53e-22 101
Msa0025340 AT4G12310.1 23.356 441 303 10 101 528 70 488 3.11e-22 100
Msa0025340 AT5G58860.1 25.658 456 283 16 119 549 84 508 3.79e-22 100
Msa0025340 AT3G26330.1 23.853 436 283 15 105 522 61 465 4.68e-22 100
Msa0025340 AT4G13770.1 24.449 454 311 12 102 542 58 492 6.92e-22 99.4
Msa0025340 AT3G26230.1 24.798 496 330 14 71 546 20 492 8.33e-22 99.4
Msa0025340 AT2G45580.1 24.891 458 298 14 106 542 69 501 9.62e-22 99.4
Msa0025340 AT4G37410.1 24.222 450 283 14 104 533 60 471 1.46e-21 98.6
Msa0025340 AT3G26125.1 21.739 460 308 11 121 549 94 532 1.71e-21 98.6
Msa0025340 AT3G26280.1 24.348 460 308 14 71 514 26 461 1.77e-21 98.2
Msa0025340 AT3G48280.1 24.726 457 290 18 106 543 61 482 1.80e-21 98.2
Msa0025340 AT3G26280.2 24.512 461 306 15 71 514 43 478 1.86e-21 98.2
Msa0025340 AT1G63710.1 22.538 457 320 12 108 549 70 507 2.17e-21 98.2
Msa0025340 AT4G31500.1 23.441 465 312 14 99 544 54 493 2.46e-21 97.8
Msa0025340 AT1G66540.2 26.033 242 169 4 296 536 69 301 3.10e-21 95.5
Msa0025340 AT5G57220.1 23.841 453 278 15 101 531 56 463 3.56e-21 97.4
Msa0025340 AT5G24950.1 25.517 435 277 15 104 522 61 464 3.76e-21 97.1
Msa0025340 AT3G48270.1 24.729 461 288 19 104 543 60 482 5.89e-21 96.7
Msa0025340 AT4G37360.1 29.787 188 124 2 347 533 290 470 6.74e-21 96.3
Msa0025340 AT5G24900.2 23.421 380 266 10 150 524 26 385 6.79e-21 95.5
Msa0025340 AT4G37340.1 29.630 189 125 2 347 534 290 471 6.84e-21 96.3
Msa0025340 AT1G66540.1 26.033 242 169 4 296 536 128 360 8.04e-21 95.1
Msa0025340 AT1G01280.1 23.239 426 290 12 104 512 61 466 1.20e-20 95.9
Msa0025340 AT4G00360.1 24.107 448 302 14 121 549 83 511 1.22e-20 95.9
Msa0025340 AT5G25180.1 24.116 481 308 12 70 528 22 467 1.97e-20 95.1
Msa0025340 AT3G48300.1 26.778 239 163 7 316 544 241 477 2.87e-20 94.4
Msa0025340 AT3G48300.2 26.778 239 163 7 316 544 243 479 2.90e-20 94.4
Msa0025340 AT3G26270.1 24.033 491 319 15 71 536 26 487 3.32e-20 94.4
Msa0025340 AT1G50560.1 28.421 190 131 3 341 526 299 487 4.27e-20 94.0
Msa0025340 AT2G45580.2 30.180 222 140 6 330 542 132 347 5.52e-20 92.0
Msa0025340 AT3G28740.1 24.183 459 277 17 96 530 64 475 1.02e-19 92.8
Msa0025340 AT1G33720.1 23.026 456 308 14 106 542 69 500 1.14e-19 92.8
Msa0025340 AT5G25130.1 23.983 467 312 13 71 522 23 461 1.34e-19 92.4
Msa0025340 AT3G20950.1 22.062 485 324 13 76 538 48 500 1.62e-19 92.4
Msa0025340 AT4G12300.1 23.165 436 298 11 106 528 73 484 2.23e-19 92.0
Msa0025340 AT3G48290.2 24.760 521 309 19 70 543 26 510 2.62e-19 91.7
Msa0025340 AT3G26160.1 25.000 492 324 18 76 546 29 496 3.28e-19 91.3
Msa0025340 AT5G25900.1 26.582 237 157 3 286 522 260 479 6.27e-19 90.5
Msa0025340 AT1G74110.1 23.725 451 313 12 112 549 104 536 1.59e-18 89.4
Msa0025340 AT4G13290.1 24.476 429 278 14 106 522 64 458 1.80e-18 89.0
Msa0025340 AT2G40890.1 24.561 456 283 11 96 527 48 466 1.97e-18 89.0
Msa0025340 AT1G33730.1 28.436 211 137 4 341 542 159 364 1.99e-18 87.8
Msa0025340 AT1G33730.2 28.436 211 137 4 341 542 159 364 1.99e-18 87.8
Msa0025340 AT1G33720.4 26.971 241 164 7 310 542 132 368 2.17e-18 87.8
Msa0025340 AT1G33720.3 26.971 241 164 7 310 542 132 368 2.17e-18 87.8
Msa0025340 AT1G33720.5 26.971 241 164 7 310 542 132 368 2.17e-18 87.8
Msa0025340 AT3G20935.1 29.843 191 128 4 351 536 131 320 2.62e-18 87.0
Msa0025340 AT2G24180.1 23.043 447 318 10 105 544 66 493 2.84e-18 88.2
Msa0025340 AT2G42250.1 24.378 201 144 3 341 534 294 493 3.21e-18 88.2
Msa0025340 AT4G15360.1 25.573 262 185 5 273 526 221 480 3.98e-18 88.2
Msa0025340 AT5G35715.1 25.837 418 271 14 120 522 11 404 4.14e-18 87.4
Msa0025340 AT3G61040.1 29.515 227 147 7 325 542 267 489 5.48e-18 87.4
Msa0025340 AT1G13100.1 24.307 469 299 16 104 550 54 488 5.69e-18 87.4
Msa0025340 AT2G26170.1 23.241 469 318 18 104 550 74 522 6.05e-18 87.4
Msa0025340 AT5G04330.1 24.115 452 284 16 106 533 63 479 6.50e-18 87.4
Msa0025340 AT4G37320.1 22.172 442 298 10 107 536 66 473 6.83e-18 87.0
Msa0025340 AT4G37370.1 23.810 462 286 17 96 536 55 471 7.80e-18 87.0
Msa0025340 AT1G74550.1 28.788 198 137 3 336 531 265 460 7.89e-18 87.0
Msa0025340 AT4G13310.1 23.218 435 284 13 106 522 63 465 1.15e-17 86.3
Msa0025340 AT3G20140.1 21.847 444 292 14 99 522 67 475 1.31e-17 86.3
Msa0025340 AT5G44620.1 21.882 425 307 10 105 522 76 482 1.36e-17 86.3
Msa0025340 AT5G36220.2 28.108 185 125 2 351 534 154 331 1.70e-17 84.7
Msa0025340 AT3G26210.1 23.598 428 277 16 106 514 62 458 1.91e-17 85.9
Msa0025340 AT4G37330.1 28.934 197 130 3 343 536 283 472 2.17e-17 85.5
Msa0025340 AT2G29090.2 23.282 451 290 12 104 547 79 480 2.20e-17 85.5
Msa0025340 AT2G29090.1 23.282 451 290 12 104 547 79 480 2.20e-17 85.5
Msa0025340 AT2G45570.1 29.268 205 125 6 351 543 306 502 2.20e-17 85.5
Msa0025340 AT1G11610.1 23.394 436 290 14 106 527 64 469 2.55e-17 85.5
Msa0025340 AT1G13710.1 25.467 428 279 17 108 523 84 483 2.67e-17 85.5
Msa0025340 AT1G74540.1 28.182 220 147 5 318 531 252 466 3.10e-17 85.1
Msa0025340 AT4G36220.1 23.636 440 295 14 104 525 69 485 3.16e-17 85.1
Msa0025340 AT5G47990.1 27.094 203 141 5 341 539 296 495 3.51e-17 85.1
Msa0025340 AT1G11610.2 23.394 436 290 14 106 527 64 469 4.09e-17 84.7
Msa0025340 AT5G10600.1 23.128 454 290 16 104 536 76 491 5.71e-17 84.3
Msa0025340 AT5G36220.1 28.108 185 125 2 351 534 300 477 6.05e-17 84.3
Msa0025340 AT2G30770.1 23.077 429 290 13 106 522 64 464 6.10e-17 84.3
Msa0025340 AT4G19230.1 26.457 223 151 5 331 549 249 462 6.27e-17 84.0
Msa0025340 AT3G19270.1 29.075 227 141 8 305 523 225 439 7.08e-17 83.6
Msa0025340 AT1G13080.1 23.346 514 322 17 67 546 21 496 8.33e-17 84.0
Msa0025340 AT4G19230.2 26.316 209 142 4 331 535 249 449 1.01e-16 83.6
Msa0025340 AT5G05690.3 30.049 203 128 5 331 527 133 327 1.07e-16 82.4
Msa0025340 AT1G50520.1 21.789 436 292 13 101 516 70 476 1.13e-16 83.6
Msa0025340 AT1G33720.2 28.934 197 128 7 354 542 201 393 1.15e-16 82.8
Msa0025340 AT3G19270.2 28.636 220 139 7 305 518 225 432 1.86e-16 82.4
Msa0025340 AT5G05690.1 30.049 203 128 5 331 527 252 446 2.14e-16 82.4
Msa0025340 AT2G23190.1 23.767 446 270 14 107 528 110 509 2.17e-16 82.8
Msa0025340 AT2G30490.1 24.138 435 301 15 99 524 58 472 2.32e-16 82.4
Msa0025340 AT5G67310.1 31.492 181 116 3 354 533 308 481 3.04e-16 82.0
Msa0025340 AT1G13110.1 22.148 447 296 13 104 528 61 477 3.23e-16 82.0
Msa0025340 AT5G06900.1 22.567 483 340 15 60 533 17 474 3.32e-16 82.0
Msa0025340 AT3G20940.1 21.930 456 295 15 104 534 72 491 5.38e-16 81.3
Msa0025340 AT3G26290.2 21.957 460 290 13 91 522 60 478 5.56e-16 81.3
Msa0025340 AT3G26290.1 21.957 460 290 13 91 522 47 465 5.83e-16 81.3
Msa0025340 AT3G26180.1 24.270 445 287 14 106 531 61 474 5.92e-16 81.3
Msa0025340 AT1G13080.2 23.873 377 229 14 194 546 36 378 6.75e-16 80.1
Msa0025340 AT5G05260.1 26.203 187 137 1 342 527 279 465 8.01e-16 80.9
Msa0025340 AT3G20130.2 25.616 203 145 4 341 538 267 468 9.08e-16 80.5
Msa0025340 AT2G29090.3 23.041 434 278 12 121 547 1 385 9.66e-16 79.7
Msa0025340 AT3G20130.1 25.616 203 145 4 341 538 295 496 9.94e-16 80.5
Msa0025340 AT5G07990.1 30.108 186 123 4 342 522 287 470 9.97e-16 80.5
Msa0025340 AT3G20960.1 25.095 263 176 8 278 526 124 379 1.05e-15 79.7
Msa0025340 AT5G05260.2 26.203 187 137 1 342 527 311 497 1.14e-15 80.5
Msa0025340 AT4G22710.1 22.302 417 275 12 105 503 84 469 1.23e-15 80.1
Msa0025340 AT3G20960.2 25.095 263 176 8 278 526 227 482 1.48e-15 80.1
Msa0025340 AT5G24960.1 32.189 233 140 8 305 522 236 465 1.76e-15 79.7
Msa0025340 AT3G26830.1 27.322 183 129 3 346 526 289 469 1.90e-15 79.3
Msa0025340 AT4G22690.1 22.062 417 276 12 105 503 115 500 2.63e-15 79.3
Msa0025340 AT2G42850.1 27.692 195 126 6 342 530 281 466 2.86e-15 79.0
Msa0025340 AT2G23220.1 21.826 449 291 14 107 536 81 488 3.61e-15 78.6
Msa0025340 AT1G16400.1 25.794 252 160 7 288 525 262 500 3.76e-15 79.0
Msa0025340 AT3G20110.1 20.814 442 294 13 104 526 69 473 4.03e-15 78.6
Msa0025340 AT4G15350.1 25.758 198 141 4 341 534 289 484 5.19e-15 78.2
Msa0025340 AT2G27000.1 20.542 443 304 10 99 522 64 477 5.26e-15 78.2
Msa0025340 AT5G45340.1 26.906 223 150 5 331 549 249 462 5.40e-15 77.8
Msa0025340 AT5G45340.2 28.571 203 127 6 331 527 249 439 6.02e-15 77.8
Msa0025340 AT3G26170.1 23.266 447 289 14 106 531 61 474 6.40e-15 77.8
Msa0025340 AT4G12330.1 25.385 260 177 7 296 550 256 503 7.31e-15 77.8
Msa0025340 AT3G53300.1 25.111 450 292 13 91 522 44 466 7.35e-15 77.8
Msa0025340 AT5G10610.1 27.528 178 124 3 354 530 296 469 8.00e-15 77.4
Msa0025340 AT1G79370.1 27.686 242 164 5 292 524 265 504 8.63e-15 77.8
Msa0025340 AT2G26170.2 25.706 354 232 13 214 550 100 439 1.26e-14 76.6
Msa0025340 AT1G13090.2 27.933 179 125 3 346 522 289 465 1.72e-14 76.6
Msa0025340 AT3G20090.1 25.628 199 141 5 341 534 159 355 2.02e-14 75.5
Msa0025340 AT3G52970.1 26.139 417 269 15 99 497 61 456 2.29e-14 76.3
Msa0025340 AT3G20090.2 25.628 199 141 5 341 534 297 493 2.74e-14 75.9
Msa0025340 AT3G44250.1 25.336 446 295 13 91 522 44 465 3.03e-14 75.9
Msa0025340 AT2G22330.2 26.203 187 137 1 337 522 341 527 3.21e-14 75.9
Msa0025340 AT1G01190.2 29.534 193 130 5 336 524 316 506 3.48e-14 75.9
Msa0025340 AT2G22330.1 26.203 187 137 1 337 522 318 504 3.62e-14 75.9
Msa0025340 AT4G37310.1 23.810 252 166 6 301 533 238 482 3.90e-14 75.5
Msa0025340 AT1G01190.1 29.534 193 130 5 336 524 311 501 3.99e-14 75.5
Msa0025340 AT3G20120.4 22.140 271 190 7 292 551 240 500 4.14e-14 75.5
Msa0025340 AT3G10570.1 23.094 446 288 16 104 527 75 487 4.17e-14 75.5
Msa0025340 AT1G28430.1 21.398 472 313 17 101 551 67 501 5.35e-14 75.1
Msa0025340 AT1G12740.2 21.145 454 304 12 103 549 70 476 6.24e-14 74.7
Msa0025340 AT1G12740.1 28.155 206 136 4 349 549 272 470 6.28e-14 74.7
Msa0025340 AT3G20120.2 22.140 271 190 7 292 551 104 364 6.40e-14 73.9
Msa0025340 AT3G20120.3 22.140 271 190 7 292 551 104 364 6.40e-14 73.9
Msa0025340 AT3G20120.1 22.140 271 190 7 292 551 104 364 6.40e-14 73.9
Msa0025340 AT2G14100.1 22.851 442 300 16 93 516 54 472 8.10e-14 74.3
Msa0025340 AT2G32440.2 28.161 174 114 4 346 515 288 454 1.07e-13 73.9
Msa0025340 AT2G32440.1 28.161 174 114 4 346 515 288 454 1.07e-13 73.9
Msa0025340 AT2G02580.1 23.908 435 287 14 106 525 62 467 1.12e-13 73.9
Msa0025340 AT5G42580.1 23.293 249 171 8 316 551 246 487 1.27e-13 73.9
Msa0025340 AT4G39950.1 26.404 178 130 1 346 522 325 502 1.32e-13 73.9
Msa0025340 AT5G36110.1 25.271 277 165 9 265 527 207 455 1.40e-13 73.6
Msa0025340 AT4G39950.2 26.404 178 130 1 346 522 365 542 1.49e-13 73.9
Msa0025340 AT3G26150.1 27.128 188 129 5 346 531 293 474 1.69e-13 73.6
Msa0025340 AT3G26180.2 28.191 188 127 5 346 531 159 340 1.72e-13 72.8
Msa0025340 AT1G16410.1 27.660 188 132 3 342 525 314 501 1.90e-13 73.6
Msa0025340 AT3G61880.1 28.736 174 120 4 351 520 324 497 2.45e-13 73.2
Msa0025340 AT3G20080.2 23.922 255 177 6 293 531 242 495 2.50e-13 72.8
Msa0025340 AT3G20080.1 23.922 255 177 6 293 531 242 495 2.50e-13 72.8
Msa0025340 AT3G61880.2 28.736 174 120 4 351 520 324 497 2.65e-13 73.2
Msa0025340 AT3G20080.4 23.922 255 177 6 293 531 105 358 3.78e-13 71.6
Msa0025340 AT3G20080.5 23.922 255 177 6 293 531 105 358 3.78e-13 71.6
Msa0025340 AT3G20080.6 23.922 255 177 6 293 531 105 358 3.78e-13 71.6
Msa0025340 AT3G20080.3 23.922 255 177 6 293 531 105 358 3.78e-13 71.6
Msa0025340 AT3G26220.1 24.587 484 314 15 71 530 23 479 4.43e-13 72.0
Msa0025340 AT3G32047.1 22.140 271 198 8 278 540 228 493 5.12e-13 72.0
Msa0025340 AT2G30750.1 31.977 172 106 6 348 510 285 454 5.72e-13 71.6
Msa0025340 AT1G64930.1 26.316 190 133 3 349 531 299 488 5.91e-13 71.6
Msa0025340 AT3G26190.1 24.519 416 291 11 91 499 44 443 6.97e-13 71.6
Msa0025340 AT3G53280.1 25.541 462 289 18 91 532 44 470 8.08e-13 71.2
Msa0025340 AT5G04660.1 20.729 439 310 12 98 520 63 479 9.44e-13 71.2
Msa0025340 AT1G73340.1 25.591 254 178 7 298 549 236 480 9.96e-13 70.9
Msa0025340 AT1G12740.4 27.014 211 138 4 349 549 272 476 1.03e-12 70.9
Msa0025340 AT4G15300.1 29.714 175 105 6 351 518 287 450 1.32e-12 70.5
Msa0025340 AT4G15300.3 29.714 175 105 6 351 518 265 428 1.52e-12 70.5
Msa0025340 AT4G15300.2 29.714 175 105 6 351 518 275 438 1.59e-12 70.1
Msa0025340 AT3G52970.2 25.641 429 270 16 99 497 61 470 3.20e-12 69.3
Msa0025340 AT1G58260.1 25.854 205 141 4 346 544 309 508 3.85e-12 69.3
Msa0025340 AT1G64940.1 24.583 240 166 5 303 531 253 488 3.94e-12 69.3
Msa0025340 AT3G50660.1 25.116 215 139 6 327 525 282 490 8.19e-12 68.2
Msa0025340 AT3G44970.1 25.676 296 180 10 262 548 211 475 2.36e-11 66.6
Msa0025340 AT1G64950.1 25.000 240 165 5 303 531 252 487 6.21e-11 65.5
Msa0025340 AT4G15393.2 29.609 179 102 7 351 518 272 437 9.25e-11 64.7

Find 111 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACATGTTCTTAAGAATTA+TGG 0.113568 1_1:-48365895 Msa0025340:CDS
CAGTTAACCCTTGATGTTAT+TGG 0.144739 1_1:-48364490 Msa0025340:CDS
ACATAGGCTGCAAAATTTAT+TGG 0.166999 1_1:-48360555 Msa0025340:three_prime_UTR
GAAGCATGAGTAATGATTTA+TGG 0.171712 1_1:+48366408 None:intergenic
TGATGATGTTTCTGATCTTT+TGG 0.179106 1_1:-48366028 Msa0025340:CDS
AGGTTTCTAGTGTGCAATTA+AGG 0.192192 1_1:-48363358 Msa0025340:CDS
CTTAAGAATTATGGGAAATA+TGG 0.214773 1_1:-48365886 Msa0025340:CDS
CCATCCAAATCAAATCTTTC+TGG 0.220944 1_1:+48361665 None:intergenic
CGGTGATCAGTTTGCGTTAT+TGG 0.234335 1_1:-48361007 Msa0025340:CDS
CAAACGGTACTTGTCTATTA+TGG 0.250314 1_1:-48364611 Msa0025340:CDS
CTACAAGCCGATGCAGTTAA+TGG 0.292597 1_1:-48364544 Msa0025340:CDS
CTAACAACAACAAAATTTCT+AGG 0.292910 1_1:+48365934 None:intergenic
ATGAAACAAATACAGATTTC+AGG 0.305953 1_1:-48361631 Msa0025340:intron
CAAATTCCTGATGAGCTTCC+GGG 0.319466 1_1:-48362292 Msa0025340:CDS
TCAAATTCCTGATGAGCTTC+CGG 0.322057 1_1:-48362293 Msa0025340:CDS
TTTGCCAGAAAGATTTGATT+TGG 0.322482 1_1:-48361669 Msa0025340:CDS
CCAGCAGCTAAACGATAAAT+AGG 0.324490 1_1:+48365958 None:intergenic
AACATGTTCTTAAGAATTAT+GGG 0.325734 1_1:-48365894 Msa0025340:CDS
TCTCTTTACATTGTTCAATA+AGG 0.330261 1_1:+48364169 None:intergenic
AAATCTGTATTTGTTTCATT+TGG 0.333904 1_1:+48361635 None:intergenic
CAACATACATCATTCTTCTA+AGG 0.341540 1_1:-48362224 Msa0025340:intron
AAACAAATTTGCCTTCCAAT+AGG 0.349844 1_1:+48364357 None:intergenic
AAGATCTTTCATATCTTCAT+AGG 0.350743 1_1:+48362988 None:intergenic
AAAATGCTGTTAGTGTTATC+AGG 0.357270 1_1:-48364206 Msa0025340:CDS
AACAAATTTGCCTTCCAATA+GGG 0.359420 1_1:+48364358 None:intergenic
GAACTTCCACCGAACAAATA+TGG 0.360432 1_1:-48366375 Msa0025340:five_prime_UTR
GTGTAAACGGCTTCAATAAC+AGG 0.366085 1_1:+48364421 None:intergenic
GATAATCCCACGACAAATAA+AGG 0.369687 1_1:-48364232 Msa0025340:CDS
CAGAATATTGGCATGACTAC+TGG 0.370279 1_1:-48360925 Msa0025340:CDS
CCTATTTATCGTTTAGCTGC+TGG 0.374778 1_1:-48365958 Msa0025340:CDS
CTATTGCTGAAGGACCTCTT+TGG 0.379152 1_1:-48365813 Msa0025340:CDS
GAAAGTGATGTGAGCCAATC+TGG 0.379298 1_1:+48366111 None:intergenic
GTATTTGTTTCATTTGGTAC+TGG 0.386111 1_1:+48361641 None:intergenic
AAACAACAAAATCCACTTCA+TGG 0.391502 1_1:-48366140 Msa0025340:CDS
GACACTTTATCTTCTAAGTA+AGG 0.393597 1_1:-48363276 Msa0025340:intron
TCCAAACTTCATATAACAAA+AGG 0.400357 1_1:+48364326 None:intergenic
AATGCAGGATTCTTCCTCAT+TGG 0.409622 1_1:-48363059 Msa0025340:intron
GCAATATTAAATTCTTATGA+TGG 0.414444 1_1:-48360491 Msa0025340:three_prime_UTR
TTTAAATGGATGAATGAGTA+TGG 0.418254 1_1:-48365982 Msa0025340:CDS
GGTTTCTAGTGTGCAATTAA+GGG 0.420397 1_1:-48363357 Msa0025340:CDS
TAATCACCCGGAAGCTCATC+AGG 0.421914 1_1:+48362286 None:intergenic
GTCATGCCAATATTCTGATC+AGG 0.425542 1_1:+48360931 None:intergenic
CCACCGGTTCGGTGCTGACT+TGG 0.428276 1_1:-48363298 Msa0025340:CDS
TCAAGCTTAGCACTTGCTAT+AGG 0.432116 1_1:+48366048 None:intergenic
TTAGGCAAGGCGCAGGGCTG+TGG 0.436817 1_1:-48364647 Msa0025340:intron
CTCTTTCAGTGCAGTGTAAA+CGG 0.437036 1_1:+48364408 None:intergenic
CTTGTCTATTATGGTGGATA+GGG 0.441107 1_1:-48364602 Msa0025340:CDS
ACTTGTCTATTATGGTGGAT+AGG 0.442907 1_1:-48364603 Msa0025340:CDS
ATAACTTGTGGTATACGAAA+TGG 0.444447 1_1:+48360458 None:intergenic
CACTGAAAGAGGCGGAGGCT+CGG 0.461227 1_1:-48364396 Msa0025340:CDS
CTGGTCCCTGATCAGAATAT+TGG 0.464771 1_1:-48360937 Msa0025340:CDS
CCAGAAAGATTTGATTTGGA+TGG 0.465872 1_1:-48361665 Msa0025340:CDS
GAGAGAGAAAGATGAGAGAG+AGG 0.469391 1_1:+48366249 None:intergenic
ATATTTGTTCGGTGGAAGTT+CGG 0.472758 1_1:+48366377 None:intergenic
AGCATCAATTCTTTCACCCT+CGG 0.474371 1_1:+48364137 None:intergenic
TTTCGAGGTCCTCCGCTGAA+TGG 0.475569 1_1:+48361036 None:intergenic
AGTATAGAGCCATATTTGTT+CGG 0.485018 1_1:+48366366 None:intergenic
AGCACTTGCTATAGGAATGT+TGG 0.493712 1_1:+48366056 None:intergenic
GTCAAAGTTGTAGTTGAATA+CGG 0.493883 1_1:+48364462 None:intergenic
AGAACATGTTTAGCAATAGC+AGG 0.495335 1_1:+48365907 None:intergenic
CGGATAAACCAATAACATCA+AGG 0.504053 1_1:+48364482 None:intergenic
TGTCCAAGTCAGCACCGAAC+CGG 0.507653 1_1:+48363295 None:intergenic
TGGTCATGAGACCACCGGTT+CGG 0.508060 1_1:-48363309 Msa0025340:CDS
CGTTTACACTGCACTGAAAG+AGG 0.510620 1_1:-48364407 Msa0025340:CDS
ATGAGCTTTGGGTAAAGAGC+AGG 0.516628 1_1:-48366438 None:intergenic
TGATCACCGACACACTTTCG+AGG 0.521584 1_1:+48361021 None:intergenic
ACATCATACCTCTTCTCTGC+TGG 0.521858 1_1:+48364065 None:intergenic
ATGTTTATTAGGCAAGGCGC+AGG 0.531984 1_1:-48364654 Msa0025340:intron
TGGTTCCATCTCTTCACAAA+CGG 0.534442 1_1:-48364627 Msa0025340:CDS
TTTCAGCCTTTATTTGTCGT+GGG 0.536430 1_1:+48364226 None:intergenic
CTTCATGGGTAAGTCCAGAT+TGG 0.538000 1_1:-48366125 Msa0025340:CDS
TAATGGAACTGCTGTTAACA+TGG 0.542440 1_1:-48364527 Msa0025340:CDS
CCAAACTTCATATAACAAAA+GGG 0.543949 1_1:+48364327 None:intergenic
AGAAATCATAATATCTTGAC+CGG 0.549490 1_1:+48362252 None:intergenic
TCTTTCATATCTTCATAGGT+AGG 0.550296 1_1:+48362992 None:intergenic
AAGTAACCTACAGGAGGATG+TGG 0.552427 1_1:+48362923 None:intergenic
CACTGCACTGAAAGAGGCGG+AGG 0.552552 1_1:-48364401 Msa0025340:CDS
TGGTAAAGGTCTTGTTGCTG+AGG 0.552693 1_1:-48365866 Msa0025340:CDS
GATTTAAGGGATTCGTCTAG+TGG 0.552870 1_1:-48360366 Msa0025340:three_prime_UTR
AGCAGTTCCATTAACTGCAT+CGG 0.553317 1_1:+48364537 None:intergenic
AACAACAAAATCCACTTCAT+GGG 0.557988 1_1:-48366139 Msa0025340:CDS
ACAGCACATGAACTTTGAGC+TGG 0.559657 1_1:-48360956 Msa0025340:CDS
GTTGAGATACGAGGATGAAG+TGG 0.568135 1_1:+48366189 None:intergenic
TTTGCTTGCCAGCAGAGAAG+AGG 0.570271 1_1:-48364073 Msa0025340:intron
ATCTGGACTTACCCATGAAG+TGG 0.570944 1_1:+48366128 None:intergenic
AATTATGGGAAATATGGTAA+AGG 0.572332 1_1:-48365880 Msa0025340:CDS
AAGTACCGTTTGTGAAGAGA+TGG 0.575024 1_1:+48364622 None:intergenic
TACAGATTCATTCCATTCAG+CGG 0.575438 1_1:-48361048 Msa0025340:intron
CATATTTACTGCATAACTTG+TGG 0.577946 1_1:+48360446 None:intergenic
TGCTGAAGGACCTCTTTGGA+CGG 0.581335 1_1:-48365809 Msa0025340:intron
ATGTCAACTATTTCAACCGT+TGG 0.584852 1_1:+48360591 None:intergenic
ACGGTACTTGTCTATTATGG+TGG 0.589745 1_1:-48364608 Msa0025340:CDS
CTTCCAATAGGGCAAAAGAT+CGG 0.596924 1_1:+48364369 None:intergenic
ATAGAGCCATATTTGTTCGG+TGG 0.598575 1_1:+48366369 None:intergenic
TAAAGAGATTGTAGAGTCCG+AGG 0.599235 1_1:-48364154 Msa0025340:CDS
TCATGCCAATATTCTGATCA+GGG 0.603426 1_1:+48360932 None:intergenic
CAGGAGGATGTGGATAAAGT+CGG 0.603592 1_1:+48362933 None:intergenic
TCATTCATCCATTTAAACAA+AGG 0.610701 1_1:+48365988 None:intergenic
GGATAAACCAATAACATCAA+GGG 0.614357 1_1:+48364483 None:intergenic
GTTGCTGGTCATGAGACCAC+CGG 0.616640 1_1:-48363314 Msa0025340:CDS
GGTGATTACAAAATCGATGC+CGG 0.617396 1_1:-48362271 Msa0025340:CDS
TGTTTATTAGGCAAGGCGCA+GGG 0.621141 1_1:-48364653 Msa0025340:intron
CCAAGTCAGCACCGAACCGG+TGG 0.626948 1_1:+48363298 None:intergenic
TTAAAGAGTACCGTCCAAAG+AGG 0.632761 1_1:+48365799 None:intergenic
GAACATGAACATGAACATGA+TGG 0.642390 1_1:+48366276 None:intergenic
TGTACATGAAACTGAGCCAA+CGG 0.644283 1_1:-48360607 Msa0025340:CDS
AAAGAGATTGTAGAGTCCGA+GGG 0.656460 1_1:-48364153 Msa0025340:CDS
ATTGGCAAAAGCTCAAGAAG+AGG 0.656759 1_1:-48363041 Msa0025340:CDS
AGATTCATTCCATTCAGCGG+AGG 0.657275 1_1:-48361045 Msa0025340:CDS
GGAGGACCTCGAAAGTGTGT+CGG 0.678742 1_1:-48361027 Msa0025340:CDS
TTACACTGCACTGAAAGAGG+CGG 0.688945 1_1:-48364404 Msa0025340:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATGTTAATTTTTTTAAAAG+GGG - chr1_1:48363084-48363103 Msa0025340:intron 10.0%
!! TAAAAATAATATAAGTGTAA+AGG + chr1_1:48364265-48364284 None:intergenic 10.0%
!!! GCTTTTAATAATGATTTTAT+TGG - chr1_1:48362065-48362084 Msa0025340:intron 15.0%
!!! AATGATTTTATTGGTTATTT+TGG - chr1_1:48362074-48362093 Msa0025340:intron 15.0%
!!! GTTATTTTCTTATGTTTATT+AGG - chr1_1:48362118-48362137 Msa0025340:intron 15.0%
!! AAATAAAACAAAGACAAAAA+AGG + chr1_1:48362505-48362524 None:intergenic 15.0%
!! ATATATAATCTAACAGAAAA+GGG + chr1_1:48362855-48362874 None:intergenic 15.0%
!!! ATTGAATTATGAAATTTTCT+TGG + chr1_1:48363020-48363039 None:intergenic 15.0%
!!! CATTTTTCTATTTTTTTTCT+TGG - chr1_1:48363057-48363076 Msa0025340:intron 15.0%
!!! TTTAATCTTTTATACTTTGT+TGG - chr1_1:48364377-48364396 Msa0025340:CDS 15.0%
!!! ACTAATTTTATATTTTCTGA+TGG - chr1_1:48364423-48364442 Msa0025340:CDS 15.0%
!!! TTTTTTATTTTAATCACCTA+CGG + chr1_1:48364983-48365002 None:intergenic 15.0%
!!! TTTTTCTTCCTTTGTTTAAA+TGG - chr1_1:48360787-48360806 Msa0025340:intron 20.0%
!! AAACATGTTCTTAAGAATTA+TGG - chr1_1:48360888-48360907 Msa0025340:intron 20.0%
!! AACATGTTCTTAAGAATTAT+GGG - chr1_1:48360889-48360908 Msa0025340:intron 20.0%
!! TAAGCAATAATAATATCACA+TGG - chr1_1:48361139-48361158 Msa0025340:intron 20.0%
!!! TCGAAGATTTTTTGTAATTT+TGG + chr1_1:48361281-48361300 None:intergenic 20.0%
!!! AGTTTTTCTGTTAGTTATTT+TGG - chr1_1:48361336-48361355 Msa0025340:intron 20.0%
!! ATATCATTATATGTGACTAT+TGG + chr1_1:48361537-48361556 None:intergenic 20.0%
!! AATTATTCACATAGTTGAAT+TGG - chr1_1:48362032-48362051 Msa0025340:intron 20.0%
!! AATAACTGTAACAAAATTGA+CGG + chr1_1:48362104-48362123 None:intergenic 20.0%
!!! ATAAAACCAAAGTATACTTT+TGG + chr1_1:48362753-48362772 None:intergenic 20.0%
!! GATATATAATCTAACAGAAA+AGG + chr1_1:48362856-48362875 None:intergenic 20.0%
!! AAGAATAAATACATGTAGAA+CGG + chr1_1:48363385-48363404 None:intergenic 20.0%
!! TACATGTATTTATTCTTACT+TGG - chr1_1:48363388-48363407 Msa0025340:intron 20.0%
!!! TTACTTTTCTTCAATGTATT+TGG - chr1_1:48363537-48363556 Msa0025340:intron 20.0%
!! AATAGAGATAATAATTCACA+GGG + chr1_1:48363704-48363723 None:intergenic 20.0%
!! TAATAGAGATAATAATTCAC+AGG + chr1_1:48363705-48363724 None:intergenic 20.0%
!! ATTATTATCTCTATTAATGC+AGG - chr1_1:48363709-48363728 Msa0025340:intron 20.0%
!!! AAAGTTCTAAACTTATGTAT+AGG - chr1_1:48363944-48363963 Msa0025340:intron 20.0%
!! AATTAAACTGTTTGTCATAT+CGG + chr1_1:48363992-48364011 None:intergenic 20.0%
!!! AGTAATATTTGCTGATATAA+TGG - chr1_1:48364033-48364052 Msa0025340:intron 20.0%
!! GTAATCAAAGAATATCAAAA+AGG + chr1_1:48364109-48364128 None:intergenic 20.0%
!! CAATTTGCAATTTAGTATAT+GGG - chr1_1:48364239-48364258 Msa0025340:CDS 20.0%
!! AAAGAGAATCATAATATCAA+AGG + chr1_1:48364635-48364654 None:intergenic 20.0%
!!! TTTCCTTGATTTTTTTTCAA+AGG - chr1_1:48364723-48364742 Msa0025340:intron 20.0%
!!! TATTTCATTATGATTTTTCC+AGG - chr1_1:48365069-48365088 Msa0025340:intron 20.0%
!! AAATCTGTATTTGTTTCATT+TGG + chr1_1:48365151-48365170 None:intergenic 20.0%
!! AATAAGCTGAAAACAATTTA+TGG - chr1_1:48365453-48365472 Msa0025340:intron 20.0%
!! AGTATAAAATATGCCAATTA+GGG + chr1_1:48365570-48365589 None:intergenic 20.0%
!!! TCTTTTCTTTGTTATCTTTT+TGG - chr1_1:48365626-48365645 Msa0025340:intron 20.0%
!! GCAATATTAAATTCTTATGA+TGG - chr1_1:48366292-48366311 Msa0025340:exon 20.0%
!!! ATTTTCTAAATGCTGATTTA+AGG - chr1_1:48366403-48366422 Msa0025340:five_prime_UTR 20.0%
!!! TTTTCTAAATGCTGATTTAA+GGG - chr1_1:48366404-48366423 Msa0025340:five_prime_UTR 20.0%
!! TTTTGATGTTGTTAAGGATT+TGG + chr1_1:48360697-48360716 None:intergenic 25.0%
!! ATCATCTTTTGATGTTGTTA+AGG + chr1_1:48360703-48360722 None:intergenic 25.0%
! TCATTCATCCATTTAAACAA+AGG + chr1_1:48360798-48360817 None:intergenic 25.0%
! TTTAAATGGATGAATGAGTA+TGG - chr1_1:48360801-48360820 Msa0025340:intron 25.0%
! CTAACAACAACAAAATTTCT+AGG + chr1_1:48360852-48360871 None:intergenic 25.0%
! CTTAAGAATTATGGGAAATA+TGG - chr1_1:48360897-48360916 Msa0025340:intron 25.0%
! AATTATGGGAAATATGGTAA+AGG - chr1_1:48360903-48360922 Msa0025340:CDS 25.0%
!!! TGTGTTTTTTTATGAGATTG+TGG - chr1_1:48361042-48361061 Msa0025340:CDS 25.0%
!!! ATCATGTTTTTATAGCAATG+TGG - chr1_1:48361085-48361104 Msa0025340:intron 25.0%
!!! TCATGTTTTTATAGCAATGT+GGG - chr1_1:48361086-48361105 Msa0025340:intron 25.0%
! GCTGCTTATATAAACAAATA+GGG - chr1_1:48361161-48361180 Msa0025340:intron 25.0%
!! AACAGAGTAAATGATCATTT+TGG - chr1_1:48361208-48361227 Msa0025340:intron 25.0%
!!! AGTTATTTTGGTTCTTGAAT+TGG - chr1_1:48361348-48361367 Msa0025340:intron 25.0%
!! TAGTTCTACTAGTAATTTGA+TGG + chr1_1:48361395-48361414 None:intergenic 25.0%
! ATACAATACACAAAAATGGT+GGG + chr1_1:48361677-48361696 None:intergenic 25.0%
! TTGCATACAATACACAAAAA+TGG + chr1_1:48361681-48361700 None:intergenic 25.0%
! TAAATAGCAATAGTGAGATT+GGG + chr1_1:48361800-48361819 None:intergenic 25.0%
! ATAAATAGCAATAGTGAGAT+TGG + chr1_1:48361801-48361820 None:intergenic 25.0%
! TCCATAAGAACTTAATTCAA+TGG - chr1_1:48361918-48361937 Msa0025340:intron 25.0%
! ACCATTGAATTAAGTTCTTA+TGG + chr1_1:48361922-48361941 None:intergenic 25.0%
! ATTAAACCTCATATTGTAGT+TGG - chr1_1:48361989-48362008 Msa0025340:intron 25.0%
! TTTCTTATGTTTATTAGGCA+AGG - chr1_1:48362123-48362142 Msa0025340:intron 25.0%
! CCAAACTTCATATAACAAAA+GGG + chr1_1:48362459-48362478 None:intergenic 25.0%
! TCCAAACTTCATATAACAAA+AGG + chr1_1:48362460-48362479 None:intergenic 25.0%
! TCTCTTTACATTGTTCAATA+AGG + chr1_1:48362617-48362636 None:intergenic 25.0%
!! TCTATTCCAAAAGTATACTT+TGG - chr1_1:48362744-48362763 Msa0025340:intron 25.0%
!! AGTTGTATAAGTTTTCCATA+AGG - chr1_1:48363140-48363159 Msa0025340:intron 25.0%
! TAAGTTAATCACAAGTATGA+AGG - chr1_1:48363253-48363272 Msa0025340:intron 25.0%
! ATGTATTTATTCTTACTTGG+TGG - chr1_1:48363391-48363410 Msa0025340:intron 25.0%
! TACATTGAAGAAAAGTAAAC+TGG + chr1_1:48363535-48363554 None:intergenic 25.0%
! TCATATGTTACAACACATAA+TGG + chr1_1:48363633-48363652 None:intergenic 25.0%
! ATAGAGATAATAATTCACAG+GGG + chr1_1:48363703-48363722 None:intergenic 25.0%
! AAGATCTTTCATATCTTCAT+AGG + chr1_1:48363798-48363817 None:intergenic 25.0%
! TATGTTACTATCTTCATAAC+TGG - chr1_1:48364130-48364149 Msa0025340:CDS 25.0%
! GCAATTTGCAATTTAGTATA+TGG - chr1_1:48364238-48364257 Msa0025340:CDS 25.0%
!! GTTTGACATTGGTTAATAAA+AGG + chr1_1:48364293-48364312 None:intergenic 25.0%
! ATCTTCTTATCAATACCTTA+AGG + chr1_1:48364469-48364488 None:intergenic 25.0%
! AGAAATCATAATATCTTGAC+CGG + chr1_1:48364534-48364553 None:intergenic 25.0%
!!! ACAGAAGATTCATTTTGAAA+TGG + chr1_1:48364704-48364723 None:intergenic 25.0%
!! TGTCCTTTGAAAAAAAATCA+AGG + chr1_1:48364729-48364748 None:intergenic 25.0%
!!! TTGATTTTTTTTCAAAGGAC+AGG - chr1_1:48364728-48364747 Msa0025340:intron 25.0%
!!! TGATTAGTTTTTCAAATCAG+TGG - chr1_1:48364898-48364917 Msa0025340:intron 25.0%
!! ATTATGATTTTTCCAGGTTT+GGG - chr1_1:48365075-48365094 Msa0025340:intron 25.0%
! ATGAAACAAATACAGATTTC+AGG - chr1_1:48365152-48365171 Msa0025340:intron 25.0%
! TTACACAATAAGATTCTGTT+TGG - chr1_1:48365255-48365274 Msa0025340:intron 25.0%
! AAACAAATGTATGTCTGTTT+GGG + chr1_1:48365508-48365527 None:intergenic 25.0%
! TAAACAAATGTATGTCTGTT+TGG + chr1_1:48365509-48365528 None:intergenic 25.0%
! GAGTATAAAATATGCCAATT+AGG + chr1_1:48365571-48365590 None:intergenic 25.0%
!!! TTTCTTTGTTATCTTTTTGG+AGG - chr1_1:48365629-48365648 Msa0025340:intron 25.0%
!!! TTCTTTGTTATCTTTTTGGA+GGG - chr1_1:48365630-48365649 Msa0025340:intron 25.0%
!!! CATTTTTGTTATCAATCCTA+TGG - chr1_1:48365657-48365676 Msa0025340:intron 25.0%
! TACAAACAAAAATACTCCAT+AGG + chr1_1:48365676-48365695 None:intergenic 25.0%
!!! GATATATGTTTTTCAACAAG+TGG - chr1_1:48365930-48365949 Msa0025340:CDS 25.0%
!! ATTTTCCGACTATAAATGAA+AGG - chr1_1:48366092-48366111 Msa0025340:CDS 25.0%
!! CTTTTCCTTTCATTTATAGT+CGG + chr1_1:48366100-48366119 None:intergenic 25.0%
!! ACATTTTATTGTGACCTAAT+AGG - chr1_1:48366134-48366153 Msa0025340:CDS 25.0%
! TGCAAAAACAAAATCCTATT+AGG + chr1_1:48366151-48366170 None:intergenic 25.0%
!!! TAATAGGATTTTGTTTTTGC+AGG - chr1_1:48366150-48366169 Msa0025340:CDS 25.0%
!!! AATAGGATTTTGTTTTTGCA+GGG - chr1_1:48366151-48366170 Msa0025340:CDS 25.0%
GAAGCATGAGTAATGATTTA+TGG + chr1_1:48360378-48360397 None:intergenic 30.0%
AGTATAGAGCCATATTTGTT+CGG + chr1_1:48360420-48360439 None:intergenic 30.0%
!! AACATGATGGCATTGTTTTT+GGG + chr1_1:48360497-48360516 None:intergenic 30.0%
!!! AAGTGGATTTTGTTGTTTCA+GGG + chr1_1:48360641-48360660 None:intergenic 30.0%
AAACAACAAAATCCACTTCA+TGG - chr1_1:48360643-48360662 Msa0025340:intron 30.0%
AACAACAAAATCCACTTCAT+GGG - chr1_1:48360644-48360663 Msa0025340:intron 30.0%
!! TGATGATGTTTCTGATCTTT+TGG - chr1_1:48360755-48360774 Msa0025340:intron 30.0%
!! GATGATGTTTCTGATCTTTT+GGG - chr1_1:48360756-48360775 Msa0025340:intron 30.0%
GGCTGCTTATATAAACAAAT+AGG - chr1_1:48361160-48361179 Msa0025340:intron 30.0%
! ATCATTTACTCTGTTAGTCT+GGG + chr1_1:48361203-48361222 None:intergenic 30.0%
!!! AATTTTGGTTAGTTAGCTCA+GGG + chr1_1:48361266-48361285 None:intergenic 30.0%
!!! TAATTTTGGTTAGTTAGCTC+AGG + chr1_1:48361267-48361286 None:intergenic 30.0%
TTCAAGGACTAAACTAACTA+AGG + chr1_1:48361314-48361333 None:intergenic 30.0%
CTAACAGAAAAACTCATTCA+AGG + chr1_1:48361330-48361349 None:intergenic 30.0%
!! TTTTGATTCCTAGATATGCA+AGG + chr1_1:48361484-48361503 None:intergenic 30.0%
GATATTATCTCAGTTGATCA+TGG - chr1_1:48361552-48361571 Msa0025340:intron 30.0%
CATACAAGTTTAGGAAAACT+TGG - chr1_1:48361576-48361595 Msa0025340:intron 30.0%
CATACAATACACAAAAATGG+TGG + chr1_1:48361678-48361697 None:intergenic 30.0%
! ATCCTCTTGTTTAAAAGACA+GGG + chr1_1:48361709-48361728 None:intergenic 30.0%
GTTGTTATCACATAACTGAA+AGG + chr1_1:48361755-48361774 None:intergenic 30.0%
AAATAGCAATAGTGAGATTG+GGG + chr1_1:48361799-48361818 None:intergenic 30.0%
CTTAATTCAATGGTTTCGAT+TGG - chr1_1:48361928-48361947 Msa0025340:intron 30.0%
GTAAACAATCAGATCTTGAA+TGG - chr1_1:48361962-48361981 Msa0025340:intron 30.0%
! ATATTGTAGTTGGTTCTCTT+GGG - chr1_1:48361999-48362018 Msa0025340:intron 30.0%
GGATAAACCAATAACATCAA+GGG + chr1_1:48362303-48362322 None:intergenic 30.0%
GTCAAAGTTGTAGTTGAATA+CGG + chr1_1:48362324-48362343 None:intergenic 30.0%
AACAAATTTGCCTTCCAATA+GGG + chr1_1:48362428-48362447 None:intergenic 30.0%
AAACAAATTTGCCTTCCAAT+AGG + chr1_1:48362429-48362448 None:intergenic 30.0%
!! CCCTTTTGTTATATGAAGTT+TGG - chr1_1:48362456-48362475 Msa0025340:intron 30.0%
AAAATGCTGTTAGTGTTATC+AGG - chr1_1:48362577-48362596 Msa0025340:intron 30.0%
AGCAAAAATCGAAGAATACT+AGG + chr1_1:48362696-48362715 None:intergenic 30.0%
!! GACTTTTTCTGAATGTTGAT+AGG - chr1_1:48362885-48362904 Msa0025340:intron 30.0%
!! TTTTTCTGAATGTTGATAGG+CGG - chr1_1:48362888-48362907 Msa0025340:intron 30.0%
! ACCATCTGATTTTCTGATTT+TGG - chr1_1:48363110-48363129 Msa0025340:intron 30.0%
TCCAAAATCAGAAAATCAGA+TGG + chr1_1:48363114-48363133 None:intergenic 30.0%
ATCGTCATTGTATACTGAAA+TGG + chr1_1:48363312-48363331 None:intergenic 30.0%
GACACTTTATCTTCTAAGTA+AGG - chr1_1:48363507-48363526 Msa0025340:intron 30.0%
GAATCATTCTCAAAGCTTAA+TGG + chr1_1:48363589-48363608 None:intergenic 30.0%
!! TAAGCTTTGAGAATGATTCA+AGG - chr1_1:48363590-48363609 Msa0025340:intron 30.0%
TAGAGATAATAATTCACAGG+GGG + chr1_1:48363702-48363721 None:intergenic 30.0%
TCTTTCATATCTTCATAGGT+AGG + chr1_1:48363794-48363813 None:intergenic 30.0%
AAGACATTCATACTGGAAAT+TGG + chr1_1:48363889-48363908 None:intergenic 30.0%
AAACTCAAAGACATTCATAC+TGG + chr1_1:48363896-48363915 None:intergenic 30.0%
ATGTATAGGTTATGCTTGAT+AGG - chr1_1:48363958-48363977 Msa0025340:intron 30.0%
CTAAATTGCAAATTGCCTTA+AGG + chr1_1:48364234-48364253 None:intergenic 30.0%
TAAGTGATGAAGTTTGACAT+TGG + chr1_1:48364304-48364323 None:intergenic 30.0%
CAACATACATCATTCTTCTA+AGG - chr1_1:48364559-48364578 Msa0025340:CDS 30.0%
!!! ATTTTGAAATGGAATCGAAC+AGG + chr1_1:48364693-48364712 None:intergenic 30.0%
CAGAAAGAAGAATAATACTC+TGG - chr1_1:48364758-48364777 Msa0025340:intron 30.0%
!!! AAGTTACCTTGTCTCTTTTT+TGG - chr1_1:48364818-48364837 Msa0025340:intron 30.0%
TGAAAACCAAAAAAGAGACA+AGG + chr1_1:48364827-48364846 None:intergenic 30.0%
!! AATTTGCTGTTATCAGTGTT+CGG - chr1_1:48364874-48364893 Msa0025340:intron 30.0%
!! TACACACCTTATTTCTATCT+CGG - chr1_1:48365008-48365027 Msa0025340:intron 30.0%
TCAAAACCGAGATAGAAATA+AGG + chr1_1:48365017-48365036 None:intergenic 30.0%
! CATTATGATTTTTCCAGGTT+TGG - chr1_1:48365074-48365093 Msa0025340:intron 30.0%
TTTGCCAGAAAGATTTGATT+TGG - chr1_1:48365114-48365133 Msa0025340:intron 30.0%
GTATTTGTTTCATTTGGTAC+TGG + chr1_1:48365145-48365164 None:intergenic 30.0%
!! TGTAATTTACACCACTTTTG+TGG + chr1_1:48365212-48365231 None:intergenic 30.0%
!! GTTGTTTTCATAAGCTATCA+TGG - chr1_1:48365418-48365437 Msa0025340:intron 30.0%
! AAAGAAAAGATAAGAGTGCA+TGG + chr1_1:48365616-48365635 None:intergenic 30.0%
ACTTGCAATGCATAGAAAAT+TGG + chr1_1:48365984-48366003 None:intergenic 30.0%
ACATAGGCTGCAAAATTTAT+TGG - chr1_1:48366228-48366247 Msa0025340:CDS 30.0%
! ATAACTTGTGGTATACGAAA+TGG + chr1_1:48366328-48366347 None:intergenic 30.0%
CATATTTACTGCATAACTTG+TGG + chr1_1:48366340-48366359 None:intergenic 30.0%
! ATATTTGTTCGGTGGAAGTT+CGG + chr1_1:48360409-48360428 None:intergenic 35.0%
!!! CATTGTTTTTGGGTTTACGT+TGG + chr1_1:48360487-48360506 None:intergenic 35.0%
! GAACATGATGGCATTGTTTT+TGG + chr1_1:48360498-48360517 None:intergenic 35.0%
GAACATGAACATGAACATGA+TGG + chr1_1:48360510-48360529 None:intergenic 35.0%
! GAAGTGGATAACGTTTTTGT+GGG + chr1_1:48360581-48360600 None:intergenic 35.0%
! TGAAGTGGATAACGTTTTTG+TGG + chr1_1:48360582-48360601 None:intergenic 35.0%
!!! TGTTGTTTCAGGGTTTTTGT+TGG + chr1_1:48360631-48360650 None:intergenic 35.0%
!!! GAAGTGGATTTTGTTGTTTC+AGG + chr1_1:48360642-48360661 None:intergenic 35.0%
AGAACATGTTTAGCAATAGC+AGG + chr1_1:48360879-48360898 None:intergenic 35.0%
! GAGGTTTCTGAGTTTTTGTT+TGG - chr1_1:48360936-48360955 Msa0025340:CDS 35.0%
!! TCTGAGTTTTTGTTTGGAGA+TGG - chr1_1:48360942-48360961 Msa0025340:CDS 35.0%
GATCATTTACTCTGTTAGTC+TGG + chr1_1:48361204-48361223 None:intergenic 35.0%
! TTTTGGTCCTTGAATGTGTT+AGG - chr1_1:48361225-48361244 Msa0025340:intron 35.0%
TGGTCTTCCATAAGTCAATT+TGG - chr1_1:48361368-48361387 Msa0025340:intron 35.0%
! TGATGGACCAAATTGACTTA+TGG + chr1_1:48361378-48361397 None:intergenic 35.0%
GATCATGGACATACAAGTTT+AGG - chr1_1:48361567-48361586 Msa0025340:intron 35.0%
CTTGTTTAAAAGACAGGGTA+AGG + chr1_1:48361704-48361723 None:intergenic 35.0%
! TACCCTGTCTTTTAAACAAG+AGG - chr1_1:48361704-48361723 Msa0025340:intron 35.0%
! CATCCTCTTGTTTAAAAGAC+AGG + chr1_1:48361710-48361729 None:intergenic 35.0%
TTAAACAAGAGGATGTTTCC+AGG - chr1_1:48361715-48361734 Msa0025340:intron 35.0%
ATCACATAACTGAAAGGTCA+TGG + chr1_1:48361749-48361768 None:intergenic 35.0%
AATAGCAATAGTGAGATTGG+GGG + chr1_1:48361798-48361817 None:intergenic 35.0%
AGAGAACCAACTACAATATG+AGG + chr1_1:48361998-48362017 None:intergenic 35.0%
! CATATTGTAGTTGGTTCTCT+TGG - chr1_1:48361998-48362017 Msa0025340:intron 35.0%
! TATTGTAGTTGGTTCTCTTG+GGG - chr1_1:48362000-48362019 Msa0025340:intron 35.0%
TCACATAGTTGAATTGGTAC+TGG - chr1_1:48362038-48362057 Msa0025340:intron 35.0%
ACTGTAACAAAATTGACGGT+TGG + chr1_1:48362100-48362119 None:intergenic 35.0%
CAAACGGTACTTGTCTATTA+TGG - chr1_1:48362172-48362191 Msa0025340:intron 35.0%
!! ACTTGTCTATTATGGTGGAT+AGG - chr1_1:48362180-48362199 Msa0025340:intron 35.0%
!! CTTGTCTATTATGGTGGATA+GGG - chr1_1:48362181-48362200 Msa0025340:intron 35.0%
TAATGGAACTGCTGTTAACA+TGG - chr1_1:48362256-48362275 Msa0025340:CDS 35.0%
CAGTTAACCCTTGATGTTAT+TGG - chr1_1:48362293-48362312 Msa0025340:CDS 35.0%
CGGATAAACCAATAACATCA+AGG + chr1_1:48362304-48362323 None:intergenic 35.0%
! CAAAAAAGGTGTGATGAACA+CGG + chr1_1:48362491-48362510 None:intergenic 35.0%
GATAATCCCACGACAAATAA+AGG - chr1_1:48362551-48362570 Msa0025340:intron 35.0%
! TTTCAGCCTTTATTTGTCGT+GGG + chr1_1:48362560-48362579 None:intergenic 35.0%
!! TTTTCAGCCTTTATTTGTCG+TGG + chr1_1:48362561-48362580 None:intergenic 35.0%
! ACATTCTGTTCAAGTTACTC+AGG - chr1_1:48362971-48362990 Msa0025340:CDS 35.0%
ATTCCTCAATTGTTGAGCTT+TGG - chr1_1:48363207-48363226 Msa0025340:intron 35.0%
ATGTTCCAGGATGAAAGTTA+TGG + chr1_1:48363288-48363307 None:intergenic 35.0%
!! AGGTTTCTAGTGTGCAATTA+AGG - chr1_1:48363425-48363444 Msa0025340:intron 35.0%
!! GGTTTCTAGTGTGCAATTAA+GGG - chr1_1:48363426-48363445 Msa0025340:intron 35.0%
! CTTTTGTCAATGTTAGTTGC+TGG - chr1_1:48363454-48363473 Msa0025340:intron 35.0%
TTGAGCAAAAACAGAACATG+AGG - chr1_1:48363662-48363681 Msa0025340:intron 35.0%
AATTGGTGTAAGTAACCTAC+AGG + chr1_1:48363872-48363891 None:intergenic 35.0%
TTTCAGAAATTCCAGCAATC+AGG + chr1_1:48364063-48364082 None:intergenic 35.0%
CTTCATAACTGGTACTGTTT+AGG - chr1_1:48364141-48364160 Msa0025340:CDS 35.0%
! GTTTAGGAGAAGCATATCAT+TGG - chr1_1:48364157-48364176 Msa0025340:CDS 35.0%
TTGCAAATTGCCTTAAGGTT+TGG + chr1_1:48364229-48364248 None:intergenic 35.0%
!! GGTTTTGTGTAAGACTTTGT+TGG + chr1_1:48364336-48364355 None:intergenic 35.0%
TATGACTCTATGCATCCTTA+AGG - chr1_1:48364451-48364470 Msa0025340:CDS 35.0%
CTTGATGTTCTTAAGTGAGA+AGG - chr1_1:48364587-48364606 Msa0025340:CDS 35.0%
CCATCCAAATCAAATCTTTC+TGG + chr1_1:48365121-48365140 None:intergenic 35.0%
!! CCAGAAAGATTTGATTTGGA+TGG - chr1_1:48365118-48365137 Msa0025340:intron 35.0%
ATTATTGCACTCCACAAAAG+TGG - chr1_1:48365198-48365217 Msa0025340:intron 35.0%
TCAAATAAGCCAATCTACAC+AGG - chr1_1:48365544-48365563 Msa0025340:intron 35.0%
ATGAAACTTAGTAGGACTGT+AGG + chr1_1:48365593-48365612 None:intergenic 35.0%
TACAGATTCATTCCATTCAG+CGG - chr1_1:48365735-48365754 Msa0025340:intron 35.0%
TAAAAAGACTGCAAGAGCAA+CGG + chr1_1:48365808-48365827 None:intergenic 35.0%
TCATGCCAATATTCTGATCA+GGG + chr1_1:48365854-48365873 None:intergenic 35.0%
ATGTCAACTATTTCAACCGT+TGG + chr1_1:48366195-48366214 None:intergenic 35.0%
!!! CATCCACTTTTTCTTCACAT+AGG - chr1_1:48366212-48366231 Msa0025340:CDS 35.0%
GAACTTCCACCGAACAAATA+TGG - chr1_1:48360408-48360427 Msa0025340:three_prime_UTR 40.0%
ATAGAGCCATATTTGTTCGG+TGG + chr1_1:48360417-48360436 None:intergenic 40.0%
! TTTTTGTGGGAGTGGTGTTT+TGG + chr1_1:48360568-48360587 None:intergenic 40.0%
! GAGGATTTTGTTGAGATACG+AGG + chr1_1:48360606-48360625 None:intergenic 40.0%
!! TTCAGGGTTTTTGTTGGTTG+AGG + chr1_1:48360625-48360644 None:intergenic 40.0%
!! AGCACTTGCTATAGGAATGT+TGG + chr1_1:48360730-48360749 None:intergenic 40.0%
!! TCAAGCTTAGCACTTGCTAT+AGG + chr1_1:48360738-48360757 None:intergenic 40.0%
!! GATGTTTCTGATCTTTTGGG+TGG - chr1_1:48360759-48360778 Msa0025340:intron 40.0%
CCAGCAGCTAAACGATAAAT+AGG + chr1_1:48360828-48360847 None:intergenic 40.0%
CCTATTTATCGTTTAGCTGC+TGG - chr1_1:48360825-48360844 Msa0025340:intron 40.0%
!!! GATGGTTTTGCTATTGCTGA+AGG - chr1_1:48360960-48360979 Msa0025340:CDS 40.0%
!! TTAAAGAGTACCGTCCAAAG+AGG + chr1_1:48360987-48361006 None:intergenic 40.0%
TGATGTAATCTCACCATTGC+TGG - chr1_1:48361601-48361620 Msa0025340:intron 40.0%
GATGTAATCTCACCATTGCT+GGG - chr1_1:48361602-48361621 Msa0025340:intron 40.0%
TGGTTCCATCTCTTCACAAA+CGG - chr1_1:48362156-48362175 Msa0025340:intron 40.0%
! AAGTACCGTTTGTGAAGAGA+TGG + chr1_1:48362164-48362183 None:intergenic 40.0%
ACGGTACTTGTCTATTATGG+TGG - chr1_1:48362175-48362194 Msa0025340:intron 40.0%
AGCAGTTCCATTAACTGCAT+CGG + chr1_1:48362249-48362268 None:intergenic 40.0%
GTGTAAACGGCTTCAATAAC+AGG + chr1_1:48362365-48362384 None:intergenic 40.0%
CTCTTTCAGTGCAGTGTAAA+CGG + chr1_1:48362378-48362397 None:intergenic 40.0%
CTTCCAATAGGGCAAAAGAT+CGG + chr1_1:48362417-48362436 None:intergenic 40.0%
TAAAGAGATTGTAGAGTCCG+AGG - chr1_1:48362629-48362648 Msa0025340:intron 40.0%
AAAGAGATTGTAGAGTCCGA+GGG - chr1_1:48362630-48362649 Msa0025340:intron 40.0%
AGCATCAATTCTTTCACCCT+CGG + chr1_1:48362649-48362668 None:intergenic 40.0%
!! GGTTTTATCGTCGTGTTCTT+TGG - chr1_1:48362765-48362784 Msa0025340:intron 40.0%
TTCCATAAGGACACGAATTG+TGG - chr1_1:48363153-48363172 Msa0025340:intron 40.0%
GAACCAAAGCTCAACAATTG+AGG + chr1_1:48363213-48363232 None:intergenic 40.0%
TTCCAGGATGAAAGTTATGG+TGG + chr1_1:48363285-48363304 None:intergenic 40.0%
ATACTGAAATGGCATGTTCC+AGG + chr1_1:48363301-48363320 None:intergenic 40.0%
ACAGAACATGAGGTCCATTA+TGG - chr1_1:48363672-48363691 Msa0025340:intron 40.0%
AATGCAGGATTCTTCCTCAT+TGG - chr1_1:48363724-48363743 Msa0025340:intron 40.0%
! TTCTTGAGCTTTTGCCAATG+AGG + chr1_1:48363741-48363760 None:intergenic 40.0%
ATTGGCAAAAGCTCAAGAAG+AGG - chr1_1:48363742-48363761 Msa0025340:intron 40.0%
! AGAGGTAGACAGAGTTTTAC+AGG - chr1_1:48363760-48363779 Msa0025340:intron 40.0%
! GAGGTAGACAGAGTTTTACA+GGG - chr1_1:48363761-48363780 Msa0025340:intron 40.0%
! TAGACAGAGTTTTACAGGGA+AGG - chr1_1:48363765-48363784 Msa0025340:intron 40.0%
TAAGGTTTGGAGACAAGCTA+TGG + chr1_1:48364216-48364235 None:intergenic 40.0%
! TAGCTTGTCTCCAAACCTTA+AGG - chr1_1:48364216-48364235 Msa0025340:CDS 40.0%
ACGTACAGCTATATCTAGAG+AGG + chr1_1:48364357-48364376 None:intergenic 40.0%
TCAAATTCCTGATGAGCTTC+CGG - chr1_1:48364490-48364509 Msa0025340:CDS 40.0%
!!! GCATCGATTTTGTAATCACC+CGG + chr1_1:48364512-48364531 None:intergenic 40.0%
GGTGATTACAAAATCGATGC+CGG - chr1_1:48364512-48364531 Msa0025340:CDS 40.0%
GGACAAGCATAAAGATAGGA+CGG + chr1_1:48364962-48364981 None:intergenic 40.0%
CTACGGACAAGCATAAAGAT+AGG + chr1_1:48364966-48364985 None:intergenic 40.0%
CTATCTTTATGCTTGTCCGT+AGG - chr1_1:48364964-48364983 Msa0025340:intron 40.0%
TGTCTGTTTGGGAGAGTTTA+AGG + chr1_1:48365497-48365516 None:intergenic 40.0%
GTGCATGGATGAAACTTAGT+AGG + chr1_1:48365601-48365620 None:intergenic 40.0%
GTCATGCCAATATTCTGATC+AGG + chr1_1:48365855-48365874 None:intergenic 40.0%
CAGAATATTGGCATGACTAC+TGG - chr1_1:48365858-48365877 Msa0025340:CDS 40.0%
TGTACATGAAACTGAGCCAA+CGG - chr1_1:48366176-48366195 Msa0025340:CDS 40.0%
CAGCCTATGTGAAGAAAAAG+TGG + chr1_1:48366218-48366237 None:intergenic 40.0%
GATTTAAGGGATTCGTCTAG+TGG - chr1_1:48366417-48366436 Msa0025340:five_prime_UTR 40.0%
GAGAGAGAAAGATGAGAGAG+AGG + chr1_1:48360537-48360556 None:intergenic 45.0%
! GGATAACGTTTTTGTGGGAG+TGG + chr1_1:48360576-48360595 None:intergenic 45.0%
GTTGAGATACGAGGATGAAG+TGG + chr1_1:48360597-48360616 None:intergenic 45.0%
ATCTGGACTTACCCATGAAG+TGG + chr1_1:48360658-48360677 None:intergenic 45.0%
CTTCATGGGTAAGTCCAGAT+TGG - chr1_1:48360658-48360677 Msa0025340:intron 45.0%
GAAAGTGATGTGAGCCAATC+TGG + chr1_1:48360675-48360694 None:intergenic 45.0%
!! TGGTAAAGGTCTTGTTGCTG+AGG - chr1_1:48360917-48360936 Msa0025340:CDS 45.0%
CTATTGCTGAAGGACCTCTT+TGG - chr1_1:48360970-48360989 Msa0025340:CDS 45.0%
GACAACGCCTAACACATTCA+AGG + chr1_1:48361235-48361254 None:intergenic 45.0%
TGACACTGCCTTGCATATCT+AGG - chr1_1:48361473-48361492 Msa0025340:intron 45.0%
! AAAATGGTGGGAACCATTCC+CGG + chr1_1:48361665-48361684 None:intergenic 45.0%
AAGGTCATGGATTCAAGTCC+TGG + chr1_1:48361736-48361755 None:intergenic 45.0%
ATGTTTATTAGGCAAGGCGC+AGG - chr1_1:48362129-48362148 Msa0025340:intron 45.0%
TGTTTATTAGGCAAGGCGCA+GGG - chr1_1:48362130-48362149 Msa0025340:intron 45.0%
CTACAAGCCGATGCAGTTAA+TGG - chr1_1:48362239-48362258 Msa0025340:CDS 45.0%
CGTTTACACTGCACTGAAAG+AGG - chr1_1:48362376-48362395 Msa0025340:intron 45.0%
TTACACTGCACTGAAAGAGG+CGG - chr1_1:48362379-48362398 Msa0025340:intron 45.0%
! CAACCGATCTTTTGCCCTAT+TGG - chr1_1:48362411-48362430 Msa0025340:intron 45.0%
! CGATCTTTTGCCCTATTGGA+AGG - chr1_1:48362415-48362434 Msa0025340:intron 45.0%
ACATCATACCTCTTCTCTGC+TGG + chr1_1:48362721-48362740 None:intergenic 45.0%
! TTCTGAATGTTGATAGGCGG+TGG - chr1_1:48362891-48362910 Msa0025340:intron 45.0%
AGCCACAATTCGTGTCCTTA+TGG + chr1_1:48363158-48363177 None:intergenic 45.0%
CACCACCATAACTTTCATCC+TGG - chr1_1:48363280-48363299 Msa0025340:CDS 45.0%
! ACTTGGTGGTTCTACATGTC+AGG - chr1_1:48363405-48363424 Msa0025340:intron 45.0%
CAGGAGGATGTGGATAAAGT+CGG + chr1_1:48363853-48363872 None:intergenic 45.0%
CTTTATCCACATCCTCCTGT+AGG - chr1_1:48363854-48363873 Msa0025340:intron 45.0%
AAGTAACCTACAGGAGGATG+TGG + chr1_1:48363863-48363882 None:intergenic 45.0%
TGGTGTAAGTAACCTACAGG+AGG + chr1_1:48363869-48363888 None:intergenic 45.0%
ATAATGGTCCTCCTGATTGC+TGG - chr1_1:48364049-48364068 Msa0025340:intron 45.0%
CAGAAATTCCAGCAATCAGG+AGG + chr1_1:48364060-48364079 None:intergenic 45.0%
CAAATTCCTGATGAGCTTCC+GGG - chr1_1:48364491-48364510 Msa0025340:CDS 45.0%
! CAGATTTCAGGTGCGCAATT+TGG - chr1_1:48365164-48365183 Msa0025340:intron 45.0%
GTAACTAGCTACAAGAGCAG+AGG + chr1_1:48365235-48365254 None:intergenic 45.0%
CAATTAGGGCCTGTGTAGAT+TGG + chr1_1:48365556-48365575 None:intergenic 45.0%
CAATCTACACAGGCCCTAAT+TGG - chr1_1:48365554-48365573 Msa0025340:intron 45.0%
AGATTCATTCCATTCAGCGG+AGG - chr1_1:48365738-48365757 Msa0025340:intron 45.0%
CGGTGATCAGTTTGCGTTAT+TGG - chr1_1:48365776-48365795 Msa0025340:intron 45.0%
ACAGCACATGAACTTTGAGC+TGG - chr1_1:48365827-48365846 Msa0025340:CDS 45.0%
CTGGTCCCTGATCAGAATAT+TGG - chr1_1:48365846-48365865 Msa0025340:CDS 45.0%
!!! ATTATGTTAATTTTTTTAAA+AGG - chr1_1:48363082-48363101 Msa0025340:intron 5.0%
!!! TTATGTTAATTTTTTTAAAA+GGG - chr1_1:48363083-48363102 Msa0025340:intron 5.0%
!!! TTTAATTGAATATTTTAAAA+TGG - chr1_1:48364661-48364680 Msa0025340:intron 5.0%
!!! TGGGAGTGGTGTTTTGGAGA+AGG + chr1_1:48360562-48360581 None:intergenic 50.0%
TGCTGAAGGACCTCTTTGGA+CGG - chr1_1:48360974-48360993 Msa0025340:CDS 50.0%
ACAACTTTACCGTAGCGCCA+AGG - chr1_1:48361770-48361789 Msa0025340:intron 50.0%
TTTGCTTGCCAGCAGAGAAG+AGG - chr1_1:48362710-48362729 Msa0025340:intron 50.0%
TCGTCGTGTTCTTTGGCAAC+TGG - chr1_1:48362772-48362791 Msa0025340:intron 50.0%
TCACAGGGGGAAGACCATAA+TGG + chr1_1:48363689-48363708 None:intergenic 50.0%
TAATCACCCGGAAGCTCATC+AGG + chr1_1:48364500-48364519 None:intergenic 50.0%
CTTCAGCTCTATCCCAAACC+TGG + chr1_1:48365090-48365109 None:intergenic 50.0%
TGATCACCGACACACTTTCG+AGG + chr1_1:48365765-48365784 None:intergenic 50.0%
TAGTGAGATTGGGGGAGCCT+TGG + chr1_1:48361790-48361809 None:intergenic 55.0%
GTTGCTGGTCATGAGACCAC+CGG - chr1_1:48363469-48363488 Msa0025340:intron 55.0%
! TGGTCATGAGACCACCGGTT+CGG - chr1_1:48363474-48363493 Msa0025340:intron 55.0%
! TGTCCAAGTCAGCACCGAAC+CGG + chr1_1:48363491-48363510 None:intergenic 55.0%
TTTCGAGGTCCTCCGCTGAA+TGG + chr1_1:48365750-48365769 None:intergenic 55.0%
! GGAGGACCTCGAAAGTGTGT+CGG - chr1_1:48365756-48365775 Msa0025340:intron 55.0%
CTCACCATTGCTGGGCAACC+CGG - chr1_1:48361610-48361629 Msa0025340:intron 60.0%
CAACCCGGTGCACTGAAGCT+CGG - chr1_1:48361625-48361644 Msa0025340:intron 60.0%
TGCACCGAGCTTCAGTGCAC+CGG + chr1_1:48361632-48361651 None:intergenic 60.0%
!! CTGAAGCTCGGTGCATACGC+AGG - chr1_1:48361637-48361656 Msa0025340:CDS 60.0%
! CTCGGTGCATACGCAGGATC+CGG - chr1_1:48361643-48361662 Msa0025340:CDS 60.0%
TCGGTGCATACGCAGGATCC+GGG - chr1_1:48361644-48361663 Msa0025340:CDS 60.0%
GCATACGCAGGATCCGGGAA+TGG - chr1_1:48361649-48361668 Msa0025340:CDS 60.0%
CACTGCACTGAAAGAGGCGG+AGG - chr1_1:48362382-48362401 Msa0025340:intron 60.0%
CACTGAAAGAGGCGGAGGCT+CGG - chr1_1:48362387-48362406 Msa0025340:intron 60.0%
TGCACCGGGTTGCCCAGCAA+TGG + chr1_1:48361617-48361636 None:intergenic 65.0%
GCACCGAGCTTCAGTGCACC+GGG + chr1_1:48361631-48361650 None:intergenic 65.0%
TTGGGGGAGCCTTGGCGCTA+CGG + chr1_1:48361782-48361801 None:intergenic 65.0%
TTAGGCAAGGCGCAGGGCTG+TGG - chr1_1:48362136-48362155 Msa0025340:intron 65.0%
! CCAAGTCAGCACCGAACCGG+TGG + chr1_1:48363488-48363507 None:intergenic 65.0%
!! CCACCGGTTCGGTGCTGACT+TGG - chr1_1:48363485-48363504 Msa0025340:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 48360354 48366451 48360354 ID=Msa0025340;Name=Msa0025340
chr1_1 mRNA 48360354 48366451 48360354 ID=Msa0025340-mRNA-1;Parent=Msa0025340;Name=Msa0025340-mRNA-1;_AED=0.04;_eAED=0.04;_QI=150|0.87|0.88|1|1|1|9|244|551
chr1_1 exon 48360354 48360633 48360354 ID=Msa0025340-mRNA-1:exon:13912;Parent=Msa0025340-mRNA-1
chr1_1 exon 48360903 48361065 48360903 ID=Msa0025340-mRNA-1:exon:13911;Parent=Msa0025340-mRNA-1
chr1_1 exon 48361632 48361714 48361632 ID=Msa0025340-mRNA-1:exon:13910;Parent=Msa0025340-mRNA-1
chr1_1 exon 48362225 48362332 48362225 ID=Msa0025340-mRNA-1:exon:13909;Parent=Msa0025340-mRNA-1
chr1_1 exon 48362934 48363074 48362934 ID=Msa0025340-mRNA-1:exon:13908;Parent=Msa0025340-mRNA-1
chr1_1 exon 48363277 48363378 48363277 ID=Msa0025340-mRNA-1:exon:13907;Parent=Msa0025340-mRNA-1
chr1_1 exon 48364074 48364271 48364074 ID=Msa0025340-mRNA-1:exon:13906;Parent=Msa0025340-mRNA-1
chr1_1 exon 48364333 48364665 48364333 ID=Msa0025340-mRNA-1:exon:13905;Parent=Msa0025340-mRNA-1
chr1_1 exon 48365810 48366451 48365810 ID=Msa0025340-mRNA-1:exon:13904;Parent=Msa0025340-mRNA-1
chr1_1 five_prime_UTR 48366302 48366451 48366302 ID=Msa0025340-mRNA-1:five_prime_utr;Parent=Msa0025340-mRNA-1
chr1_1 CDS 48365810 48366301 48365810 ID=Msa0025340-mRNA-1:cds;Parent=Msa0025340-mRNA-1
chr1_1 CDS 48364333 48364665 48364333 ID=Msa0025340-mRNA-1:cds;Parent=Msa0025340-mRNA-1
chr1_1 CDS 48364074 48364271 48364074 ID=Msa0025340-mRNA-1:cds;Parent=Msa0025340-mRNA-1
chr1_1 CDS 48363277 48363378 48363277 ID=Msa0025340-mRNA-1:cds;Parent=Msa0025340-mRNA-1
chr1_1 CDS 48362934 48363074 48362934 ID=Msa0025340-mRNA-1:cds;Parent=Msa0025340-mRNA-1
chr1_1 CDS 48362225 48362332 48362225 ID=Msa0025340-mRNA-1:cds;Parent=Msa0025340-mRNA-1
chr1_1 CDS 48361632 48361714 48361632 ID=Msa0025340-mRNA-1:cds;Parent=Msa0025340-mRNA-1
chr1_1 CDS 48360903 48361065 48360903 ID=Msa0025340-mRNA-1:cds;Parent=Msa0025340-mRNA-1
chr1_1 CDS 48360598 48360633 48360598 ID=Msa0025340-mRNA-1:cds;Parent=Msa0025340-mRNA-1
chr1_1 three_prime_UTR 48360354 48360597 48360354 ID=Msa0025340-mRNA-1:three_prime_utr;Parent=Msa0025340-mRNA-1
Gene Sequence

>Msa0025340

ATGCCATCATGTTCATGTTCATGTTCACTTCCTCTCTCTCATCTTTCTCTCTCTTCCTTCTCCAAAACACCACTCCCACAAAAACGTTATCCACTTCATCCTCGTATCTCAACAAAATCCTCAACCAACAAAAACCCTGAAACAACAAAATCCACTTCATGGGTAAGTCCAGATTGGCTCACATCACTTTCCAAATCCTTAACAACATCAAAAGATGATGATTCCAACATTCCTATAGCAAGTGCTAAGCTTGATGATGTTTCTGATCTTTTGGGTGGTGCTCTTTTTCTTCCTTTGTTTAAATGGATGAATGAGTATGGTCCTATTTATCGTTTAGCTGCTGGTCCTAGAAATTTTGTTGTTGTTAGTGATCCTGCTATTGCTAAACATGTTCTTAAGAATTATGGGAAATATGGTAAAGGTCTTGTTGCTGAGGTTTCTGAGTTTTTGTTTGGAGATGGTTTTGCTATTGCTGAAGGACCTCTTTGGACGGCAAGGCGCAGGGCTGTGGTTCCATCTCTTCACAAACGGTACTTGTCTATTATGGTGGATAGGGTGTTCTGTAAATGTGCAGAGAGATTAGTAGAGAAGCTACAAGCCGATGCAGTTAATGGAACTGCTGTTAACATGGAAGACAAGTTTTCTCAGTTAACCCTTGATGTTATTGGTTTATCCGTATTCAACTACAACTTTGACGCACTGAATTCAGACAGTCCTGTTATTGAAGCCGTTTACACTGCACTGAAAGAGGCGGAGGCTCGGTCAACCGATCTTTTGCCCTATTGGAAGGCAAATTTGTTTCTCATATCCCTTTTGTTATATGAAATTGATTTTCTTTGTAAGATAATCCCACGACAAATAAAGGCTGAAAATGCTGTTAGTGTTATCAGGAAAACTGTAGAAGACCTTATTGAACAATGTAAAGAGATTGTAGAGTCCGAGGGTGAAAGAATTGATGCTGATGAATATGTGAATGACGCTGATCCTAGTATTCTTCGATTTTTGCTTGCCAGCAGAGAAGAGGTTTCTAGTGTGCAATTAAGGGATGATCTTTTGTCAATGTTAGTTGCTGGTCATGAGACCACCGGTTCGGTGCTGACTTGGACACTTTATCTTCTAAGTAAGGATTCTTCCTCATTGGCAAAAGCTCAAGAAGAGGTAGACAGAGTTTTACAGGGAAGGCGTCCTACCTATGAAGATATGAAAGATCTTAAGTTCTTGAATCGCTGTATTATCGAGTCACTCCGACTTTATCCACATCCTCCTGTATTGATAAGAAGATCTCAAATTCCTGATGAGCTTCCGGGTGATTACAAAATCGATGCCGGTCAAGATATTATGATTTCTGTGTACAACATACATCATTCTTCTAAGGTTTGGGATAGAGCTGAAGAGTTTTTGCCAGAAAGATTTGATTTGGATGGTCCAGTACCAAATGAAACAAATACAGATTTCAGATTCATTCCATTCAGCGGAGGACCTCGAAAGTGTGTCGGTGATCAGTTTGCGTTATTGGAAGCTACCGTTGCTCTTGCAGTCTTTTTACAGCACATGAACTTTGAGCTGGTCCCTGATCAGAATATTGGCATGACTACTGGAGCAACAATACATACAACAAATGGCTTGTACATGAAACTGAGCCAACGGTTGAAATAG
Protein sequence

>Msa0025340

MPSCSCSCSLPLSHLSLSSFSKTPLPQKRYPLHPRISTKSSTNKNPETTKSTSWVSPDWLTSLSKSLTTSKDDDSNIPIASAKLDDVSDLLGGALFLPLFKWMNEYGPIYRLAAGPRNFVVVSDPAIAKHVLKNYGKYGKGLVAEVSEFLFGDGFAIAEGPLWTARRRAVVPSLHKRYLSIMVDRVFCKCAERLVEKLQADAVNGTAVNMEDKFSQLTLDVIGLSVFNYNFDALNSDSPVIEAVYTALKEAEARSTDLLPYWKANLFLISLLLYEIDFLCKIIPRQIKAENAVSVIRKTVEDLIEQCKEIVESEGERIDADEYVNDADPSILRFLLASREEVSSVQLRDDLLSMLVAGHETTGSVLTWTLYLLSKDSSSLAKAQEEVDRVLQGRRPTYEDMKDLKFLNRCIIESLRLYPHPPVLIRRSQIPDELPGDYKIDAGQDIMISVYNIHHSSKVWDRAEEFLPERFDLDGPVPNETNTDFRFIPFSGGPRKCVGDQFALLEATVALAVFLQHMNFELVPDQNIGMTTGATIHTTNGLYMKLSQRLK*