AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0112340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0112340 MtrunA17_Chr1g0169451 78.356 365 6 5 1 292 1 365 0.0 527
Msa0112340 MtrunA17_Chr5g0397071 50.538 93 41 2 136 223 136 228 1.86e-19 87.0
Msa0112340 MtrunA17_Chr7g0249231 43.820 89 45 1 139 227 76 159 1.69e-14 72.0
Msa0112340 MtrunA17_Chr1g0210221 44.444 90 43 3 138 226 7 90 5.65e-12 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0112340 AT4G13590.1 65.637 259 85 1 18 272 25 283 1.94e-102 303
Msa0112340 AT4G13590.2 64.865 259 87 1 18 272 25 283 3.62e-101 300
Msa0112340 AT1G64150.1 48.333 120 52 4 137 251 157 271 6.15e-21 92.0
Msa0112340 AT5G36290.1 43.119 109 52 3 131 236 74 175 1.63e-13 69.7
Msa0112340 AT5G36290.2 43.119 109 52 3 131 236 74 175 1.63e-13 69.7
Msa0112340 AT1G25520.1 46.067 89 41 2 138 225 7 89 2.10e-12 65.9
Msa0112340 AT1G68650.1 43.820 89 43 2 138 225 7 89 1.91e-11 63.2

Find 74 sgRNAs with CRISPR-Local

Find 712 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCATCAGGTTGGTTATT+TGG 0.099863 1_3:+26978631 Msa0112340:intron
TTTATGTGTGGTTGGGATTT+TGG 0.132200 1_3:-26969637 None:intergenic
ACAAATGAAAACTTGTTAAT+TGG 0.144645 1_3:+26979017 Msa0112340:three_prime_UTR
CAAATCCTCTTGAGATTCTT+TGG 0.174329 1_3:+26977727 Msa0112340:CDS
AGTAAGATGCAGACAGAAAT+TGG 0.222922 1_3:+26970283 Msa0112340:intron
TTTCATCAGGTTGGTTATTT+GGG 0.251861 1_3:+26978632 Msa0112340:intron
TCAATCCTATCTGTTGTAAT+TGG 0.287895 1_3:+26976041 Msa0112340:CDS
AATTTCTGTCAGAGACATTC+TGG 0.311817 1_3:-26970397 None:intergenic
TTTCTATGTTCTCTCATCAT+TGG 0.313993 1_3:-26978786 None:intergenic
CCTATTCGAACTTACTTGTT+TGG 0.322104 1_3:-26976094 None:intergenic
TTCTCAAAGCCTGGCTCTAA+TGG 0.329012 1_3:-26978904 None:intergenic
TTAATATTTGTTTCTGAAAT+CGG 0.332716 1_3:+26971746 Msa0112340:CDS
CTTGCAGCAATTGCAAAATC+AGG 0.333816 1_3:+26971704 Msa0112340:CDS
ATATATCATTGATGGAAATA+AGG 0.344099 1_3:+26978740 Msa0112340:three_prime_UTR
CCATCTTGTACTTATTTCTC+TGG 0.370720 1_3:+26969787 Msa0112340:CDS
TGTGTACAATATATCATTGA+TGG 0.372898 1_3:+26978732 Msa0112340:three_prime_UTR
AACGCTAACATTTGATGCTT+GGG 0.391961 1_3:-26970336 None:intergenic
TCAGCTAGTTCATCAAGTTC+AGG 0.393960 1_3:-26977341 None:intergenic
CTGCATATTCTCCGATTGGC+AGG 0.397092 1_3:-26977226 None:intergenic
TTGATTTCATAGTAAACCTT+AGG 0.400190 1_3:+26978831 Msa0112340:three_prime_UTR
ATTCTTTATTGCTGCACTCT+TGG 0.409806 1_3:+26974935 Msa0112340:CDS
ATGTCAATAATTTGCTCCTA+AGG 0.410529 1_3:-26978847 None:intergenic
GTAAGATGCAGACAGAAATT+GGG 0.414311 1_3:+26970284 Msa0112340:intron
CAACGCTAACATTTGATGCT+TGG 0.415698 1_3:-26970337 None:intergenic
CAGGTTGGTTATTTGGGTGG+AGG 0.435131 1_3:+26978638 Msa0112340:intron
GTTAGGATCAATGGGTGCTC+TGG 0.445738 1_3:+26976010 Msa0112340:CDS
ATCAAATGTTAGCGTTGGAC+CGG 0.451541 1_3:+26970343 Msa0112340:CDS
ACAGCTTTCTTCTCAAAGCC+TGG 0.455912 1_3:-26978913 None:intergenic
AGGTTGGTTATTTGGGTGGA+GGG 0.484602 1_3:+26978639 Msa0112340:intron
TTCAATATTGCAAATGAAAG+AGG 0.489232 1_3:-26969757 None:intergenic
ACAGAAATTGGGGTTGAGCT+TGG 0.489408 1_3:+26970295 Msa0112340:CDS
CATCAGGTTGGTTATTTGGG+TGG 0.492256 1_3:+26978635 Msa0112340:intron
TTACTTGTTTGGAACTGAGC+AGG 0.496197 1_3:-26976083 None:intergenic
AAAGCTATAGAGACGGGATA+AGG 0.505986 1_3:-26971614 None:intergenic
CATACACCCTTGATTCCAAA+GGG 0.511728 1_3:+26969727 Msa0112340:CDS
CTACCTACAGCCCTGCCAAT+CGG 0.512958 1_3:+26977215 Msa0112340:intron
AAACTTACATGGAGATAAAG+TGG 0.528431 1_3:-26969815 None:intergenic
TCAAATGTTAGCGTTGGACC+GGG 0.528619 1_3:+26970344 Msa0112340:CDS
TAAAATCAATAAAAGACGCA+TGG 0.530108 1_3:+26977276 Msa0112340:CDS
GCAAATTATTGACATGGTGA+TGG 0.532893 1_3:+26978855 Msa0112340:three_prime_UTR
TCGAATGTTCTGCTAAGCTA+AGG 0.537467 1_3:-26969574 None:intergenic
CTTGGGCTCGAATTGTTCCA+CGG 0.538454 1_3:-26970319 None:intergenic
CGCATGGGATCTTCCTTCAA+AGG 0.539180 1_3:+26977292 Msa0112340:CDS
CTTGGCAATGCAATATGAGA+AGG 0.551638 1_3:+26974953 Msa0112340:CDS
CAAGCATCAAATGTTAGCGT+TGG 0.556624 1_3:+26970338 Msa0112340:CDS
TCACTAATAGCGTTTGTGAA+AGG 0.557958 1_3:+26971665 Msa0112340:CDS
AGCACAAAAGCTATAGAGAC+GGG 0.560001 1_3:-26971620 None:intergenic
ACTGCTGCATATTCTCCGAT+TGG 0.561503 1_3:-26977230 None:intergenic
TGCATATTCTCCGATTGGCA+GGG 0.562749 1_3:-26977225 None:intergenic
CCAGAGAAATAAGTACAAGA+TGG 0.563642 1_3:-26969787 None:intergenic
AAAATCAATAAAAGACGCAT+GGG 0.563865 1_3:+26977277 Msa0112340:CDS
TTGGGCTCGAATTGTTCCAC+GGG 0.564020 1_3:-26970318 None:intergenic
AATATTGCAAATGAAAGAGG+AGG 0.573313 1_3:-26969754 None:intergenic
AAATGTTAGCGTTGGACCGG+GGG 0.578907 1_3:+26970346 Msa0112340:CDS
TGTTTCTGAAATCGGTGACA+AGG 0.580810 1_3:+26971754 Msa0112340:CDS
TTATTGCTTCCATAATCCCC+CGG 0.585329 1_3:-26970362 None:intergenic
CAGGCACTGATTGAAAGATA+CGG 0.586259 1_3:-26976064 None:intergenic
TCATACACCCTTGATTCCAA+AGG 0.588292 1_3:+26969726 Msa0112340:CDS
TGATATCTACCATTAGAGCC+AGG 0.593239 1_3:+26978895 Msa0112340:three_prime_UTR
AATGCAATATGAGAAGGGAT+TGG 0.594404 1_3:+26974959 Msa0112340:CDS
CTAATAGCGTTTGTGAAAGG+AGG 0.597957 1_3:+26971668 Msa0112340:CDS
ACGGGATAAGGAATCTGAGT+AGG 0.607992 1_3:-26971602 None:intergenic
TTGGGGTTGAGCTTGGCCCG+TGG 0.609579 1_3:+26970302 Msa0112340:CDS
TACGGCCAATTACAACAGAT+AGG 0.609783 1_3:-26976046 None:intergenic
CAGCACAAAAGCTATAGAGA+CGG 0.611599 1_3:-26971621 None:intergenic
TAAGATGCAGACAGAAATTG+GGG 0.617935 1_3:+26970285 Msa0112340:CDS
CAAATGTTAGCGTTGGACCG+GGG 0.618540 1_3:+26970345 Msa0112340:CDS
GATTTCCAAAGAATCTCAAG+AGG 0.623224 1_3:-26977732 None:intergenic
TTGGCAATGCAATATGAGAA+GGG 0.625006 1_3:+26974954 Msa0112340:CDS
GGAAGATACATGCTCGAACA+CGG 0.627517 1_3:+26978761 Msa0112340:three_prime_UTR
ATTGCTGCAAGAACTGATGA+AGG 0.633169 1_3:-26971692 None:intergenic
TGATGAACTAGCTGAAGCAG+AGG 0.638039 1_3:+26977349 Msa0112340:CDS
TTAGGAGCAAATTATTGACA+TGG 0.661521 1_3:+26978849 Msa0112340:three_prime_UTR
AATATCTTCAGGCATCGCAA+CGG 0.661954 1_3:+26977700 Msa0112340:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATAAATAAAATATTAAT+CGG + chr1_3:26975284-26975303 Msa0112340:intron 0.0%
!! TAAAAAAAAAAAAACATGAA+AGG + chr1_3:26969694-26969713 Msa0112340:exon 10.0%
!! AAATATATACATTATGTTAT+TGG + chr1_3:26970211-26970230 Msa0112340:intron 10.0%
!! ATTTAGTGTAATTTATATTT+CGG + chr1_3:26975937-26975956 Msa0112340:intron 10.0%
!!! TCTTTACAATTTTTTTTTAA+TGG + chr1_3:26976676-26976695 Msa0112340:intron 10.0%
!! TGAAAATAAATTTATAAAGA+GGG - chr1_3:26976811-26976830 None:intergenic 10.0%
!! TTGAAAATAAATTTATAAAG+AGG - chr1_3:26976812-26976831 None:intergenic 10.0%
!!! AACATATTTTTTCATCAATT+TGG - chr1_3:26969996-26970015 None:intergenic 15.0%
!! CATCTTACTATATATAATTT+AGG - chr1_3:26970272-26970291 None:intergenic 15.0%
!!! CTTTTATTAGAATTGTAATA+GGG - chr1_3:26971552-26971571 None:intergenic 15.0%
!!! ACTTTTATTAGAATTGTAAT+AGG - chr1_3:26971553-26971572 None:intergenic 15.0%
!!! TTAATATTTGTTTCTGAAAT+CGG + chr1_3:26971746-26971765 Msa0112340:CDS 15.0%
!! TTGTAACTAAAGAATATAAA+AGG + chr1_3:26974818-26974837 Msa0112340:intron 15.0%
!! TGTAACTAAAGAATATAAAA+GGG + chr1_3:26974819-26974838 Msa0112340:intron 15.0%
!! ATTAGAATTATATGTATTCA+TGG + chr1_3:26974879-26974898 Msa0112340:intron 15.0%
!! TTATAATTTATATATTGACC+AGG + chr1_3:26975983-26976002 Msa0112340:intron 15.0%
!! GAAAATAAATTTATAAAGAG+GGG - chr1_3:26976810-26976829 None:intergenic 15.0%
!! GAATTATATTACTTTGATAT+TGG + chr1_3:26977636-26977655 Msa0112340:intron 15.0%
!! AAAAAGTTATTTATAGATCA+TGG - chr1_3:26978266-26978285 None:intergenic 15.0%
!!! ATTTCATTTTTCTTTATGTG+TGG - chr1_3:26969652-26969671 None:intergenic 20.0%
!! AAAAAAAACATGAAAGGTTT+AGG + chr1_3:26969700-26969719 Msa0112340:exon 20.0%
!! AGATATTGAAAAAACTTACA+TGG - chr1_3:26969829-26969848 None:intergenic 20.0%
!!! TGTAAGTTTTTTCAATATCT+TGG + chr1_3:26969829-26969848 Msa0112340:intron 20.0%
!!! TATAGTATTTTGTTATGTTC+TGG + chr1_3:26969905-26969924 Msa0112340:intron 20.0%
!! ACAAAAAATGTTGTTCTTAT+TGG + chr1_3:26970177-26970196 Msa0112340:intron 20.0%
!!! GAAAAGTTGGTAAAAAAAAT+AGG + chr1_3:26971001-26971020 Msa0112340:intron 20.0%
!!! AAGTATATATTTTTTTGGGT+TGG + chr1_3:26971569-26971588 Msa0112340:intron 20.0%
!! TAACCTACTTAAGTATAAAA+CGG + chr1_3:26971825-26971844 Msa0112340:intron 20.0%
!!! GATTATTAACTTGATTATGA+AGG + chr1_3:26971900-26971919 Msa0112340:intron 20.0%
!! TTAAATCTAACATGAAAAGT+TGG + chr1_3:26972041-26972060 Msa0112340:intron 20.0%
!!! AAATTACTAGTTTACTCTAA+TGG - chr1_3:26972586-26972605 None:intergenic 20.0%
!!! ACTAGTAATTTAACATGTTT+TGG + chr1_3:26972595-26972614 Msa0112340:intron 20.0%
!!! CTAGTAATTTAACATGTTTT+GGG + chr1_3:26972596-26972615 Msa0112340:intron 20.0%
!!! AAATTACTAGTTTACTCTAA+TGG - chr1_3:26972586-26972605 None:intergenic 20.0%
!! TTATTCATGAAAATCTTTCA+GGG + chr1_3:26974696-26974715 Msa0112340:intron 20.0%
!!! TTGTTTTGTTTTAATCTTTC+TGG + chr1_3:26974741-26974760 Msa0112340:intron 20.0%
!! GTAACTAAAGAATATAAAAG+GGG + chr1_3:26974820-26974839 Msa0112340:intron 20.0%
!! TAATTTCAATCATGAAATGT+AGG - chr1_3:26975104-26975123 None:intergenic 20.0%
!! GGATATCTAATTAATAGTAT+AGG - chr1_3:26975363-26975382 None:intergenic 20.0%
!! CAGAATAGCTAAATTTATAT+GGG - chr1_3:26975592-26975611 None:intergenic 20.0%
!! TTAAAACTATGAGCATTAAT+TGG - chr1_3:26975863-26975882 None:intergenic 20.0%
!! GCTTATAAATTGATATTATG+TGG + chr1_3:26976257-26976276 Msa0112340:intron 20.0%
!! AATGAGAATAACATTGAAAA+AGG - chr1_3:26976308-26976327 None:intergenic 20.0%
!! AATCGACATATAGATTTAAT+TGG - chr1_3:26976351-26976370 None:intergenic 20.0%
!! TTAGCATATACTTCATAATT+TGG + chr1_3:26977819-26977838 Msa0112340:intron 20.0%
!! AAATACAAAGAATTAATCAG+AGG - chr1_3:26978581-26978600 None:intergenic 20.0%
!! ATATATCATTGATGGAAATA+AGG + chr1_3:26978740-26978759 Msa0112340:three_prime_UTR 20.0%
!!! AAGTTTTCATTTGTAATGAA+TGG - chr1_3:26979011-26979030 None:intergenic 20.0%
!!! ACAAATGAAAACTTGTTAAT+TGG + chr1_3:26979017-26979036 Msa0112340:three_prime_UTR 20.0%
!! ATTTTTCTTTATGTGTGGTT+GGG - chr1_3:26969647-26969666 None:intergenic 25.0%
! TTCAATATTGCAAATGAAAG+AGG - chr1_3:26969760-26969779 None:intergenic 25.0%
!!! TGATGACTAGTTTAAAATTC+TGG + chr1_3:26970030-26970049 Msa0112340:intron 25.0%
! GATTTCAATGTTGTTCTTAT+TGG + chr1_3:26970052-26970071 Msa0112340:intron 25.0%
!! TACTTACGATTGTTTTCTTA+AGG + chr1_3:26970234-26970253 Msa0112340:intron 25.0%
! AATTGATGCTGTTATCAAAT+TGG + chr1_3:26970668-26970687 Msa0112340:intron 25.0%
!! GATTTTTAACGTTACAACTA+AGG - chr1_3:26970701-26970720 None:intergenic 25.0%
!! AGGATTTTTCTTTTTACTCT+TGG + chr1_3:26970844-26970863 Msa0112340:intron 25.0%
!! TTTTCTTTTTACTCTTGGAT+TGG + chr1_3:26970849-26970868 Msa0112340:intron 25.0%
!! TTTACCAACTTTTCTACTAT+AGG - chr1_3:26970995-26971014 None:intergenic 25.0%
! GTAAAAAAAATAGGCTTAGA+TGG + chr1_3:26971010-26971029 Msa0112340:intron 25.0%
! GAGAAATAACTGAGTTTATT+TGG - chr1_3:26971207-26971226 None:intergenic 25.0%
! AAAGAGATACAGAATATCAA+AGG + chr1_3:26971292-26971311 Msa0112340:intron 25.0%
!! TAATGATTTGAAGTGTCAAT+TGG + chr1_3:26971315-26971334 Msa0112340:intron 25.0%
! ATTCCATATGTGTGATATTA+GGG - chr1_3:26971398-26971417 None:intergenic 25.0%
! ATTCATTATGCAGATTATGT+AGG + chr1_3:26971442-26971461 Msa0112340:intron 25.0%
! ACCAAAATGTTCATGTATAA+TGG - chr1_3:26971851-26971870 None:intergenic 25.0%
! TAGTTTAAGCTATCAAGTAA+AGG + chr1_3:26972002-26972021 Msa0112340:intron 25.0%
! ACATGGAAAATGTAATCAAA+TGG + chr1_3:26972209-26972228 Msa0112340:intron 25.0%
!!! TAATCAAATGGATTAGAATC+AGG + chr1_3:26972221-26972240 Msa0112340:intron 25.0%
!!! AATCAAATGGATTAGAATCA+GGG + chr1_3:26972222-26972241 Msa0112340:intron 25.0%
! AGTGTATTATTCATGATGAA+AGG + chr1_3:26972254-26972273 Msa0112340:intron 25.0%
! AAGGAGAATTCTGTTATATA+GGG - chr1_3:26972398-26972417 None:intergenic 25.0%
!! TTACTCCTTTAACATGTTTT+GGG + chr1_3:26972555-26972574 Msa0112340:intron 25.0%
!!! TAATTTAACATGTTTTGGGA+TGG + chr1_3:26972600-26972619 Msa0112340:intron 25.0%
!! GGTTCTCTTTGAATATATTT+TGG - chr1_3:26972815-26972834 None:intergenic 25.0%
! ATAATGAATTTCCTCAACAT+GGG + chr1_3:26972835-26972854 Msa0112340:intron 25.0%
! AACACTTAGTAAATCCATTT+GGG - chr1_3:26972912-26972931 None:intergenic 25.0%
!!! AAATTTCTTTTTCATTGCCA+AGG - chr1_3:26974404-26974423 None:intergenic 25.0%
! ACTGAGAAAAGGTAATAAAA+TGG + chr1_3:26974480-26974499 Msa0112340:intron 25.0%
!!! AAATGGATTAGAATCAGTTA+AGG + chr1_3:26974497-26974516 Msa0112340:intron 25.0%
! CTTATTCATGAAAATCTTTC+AGG + chr1_3:26974695-26974714 Msa0112340:intron 25.0%
! GATATCATCACATCAATATT+GGG - chr1_3:26975052-26975071 None:intergenic 25.0%
! AGATATCATCACATCAATAT+TGG - chr1_3:26975053-26975072 None:intergenic 25.0%
! ATTGAAATTACTCTTCACTT+TGG + chr1_3:26975114-26975133 Msa0112340:intron 25.0%
! AGTATAGGTACAATCAATTT+GGG - chr1_3:26975348-26975367 None:intergenic 25.0%
! TAGTATAGGTACAATCAATT+TGG - chr1_3:26975349-26975368 None:intergenic 25.0%
!! TGTTTTTCTAGGTTTAAATG+AGG - chr1_3:26975384-26975403 None:intergenic 25.0%
! CTAAATTGTTTATCGAAAGA+GGG - chr1_3:26975475-26975494 None:intergenic 25.0%
! TCTAAATTGTTTATCGAAAG+AGG - chr1_3:26975476-26975495 None:intergenic 25.0%
! TCTTTCGATAAACAATTTAG+AGG + chr1_3:26975475-26975494 Msa0112340:intron 25.0%
!! TTGATTGGTTAAAATTCACA+TGG + chr1_3:26975545-26975564 Msa0112340:intron 25.0%
!! TGATTGGTTAAAATTCACAT+GGG + chr1_3:26975546-26975565 Msa0112340:intron 25.0%
! CCAGAATAGCTAAATTTATA+TGG - chr1_3:26975593-26975612 None:intergenic 25.0%
! CCATATAAATTTAGCTATTC+TGG + chr1_3:26975590-26975609 Msa0112340:intron 25.0%
! ATTTCTACACAAGTTACAAT+GGG - chr1_3:26975725-26975744 None:intergenic 25.0%
! GGTAATATATAAAAGAGAAG+TGG - chr1_3:26975758-26975777 None:intergenic 25.0%
! ATTGGTACACTAGTATTTAT+TGG - chr1_3:26976333-26976352 None:intergenic 25.0%
! AAATTTATAAAGAGGGGATT+GGG - chr1_3:26976804-26976823 None:intergenic 25.0%
! TAAATTTATAAAGAGGGGAT+TGG - chr1_3:26976805-26976824 None:intergenic 25.0%
! TCAATGTACTATTTCACATT+AGG + chr1_3:26977086-26977105 Msa0112340:intron 25.0%
! CAAACACTGAATGAAAATTA+TGG - chr1_3:26977135-26977154 None:intergenic 25.0%
!!! GTAACTCTTCTTATGTTTTT+TGG + chr1_3:26977251-26977270 Msa0112340:CDS 25.0%
!!! ATGCGTCTTTTATTGATTTT+AGG - chr1_3:26977277-26977296 None:intergenic 25.0%
! TAAAATCAATAAAAGACGCA+TGG + chr1_3:26977276-26977295 Msa0112340:CDS 25.0%
! AAAATCAATAAAAGACGCAT+GGG + chr1_3:26977277-26977296 Msa0112340:CDS 25.0%
!! TGGTTGTGAATATTTTTCTT+AGG + chr1_3:26977415-26977434 Msa0112340:intron 25.0%
!! GGTTGTGAATATTTTTCTTA+GGG + chr1_3:26977416-26977435 Msa0112340:intron 25.0%
!! ACTTGTTAAGGATTTAAAAG+AGG - chr1_3:26977522-26977541 None:intergenic 25.0%
! AAAACTTGACAATAAGAGAA+CGG - chr1_3:26977568-26977587 None:intergenic 25.0%
!! TTTTATAAGTTGCAACAGTT+CGG + chr1_3:26977584-26977603 Msa0112340:intron 25.0%
! ATACAAAAGATCAGAGAAAA+AGG - chr1_3:26977788-26977807 None:intergenic 25.0%
!!! ATCTTACAATTTGTTGCATT+TGG + chr1_3:26977904-26977923 Msa0112340:intron 25.0%
! AAGTAATACTGAAATGTTGA+GGG - chr1_3:26977941-26977960 None:intergenic 25.0%
! AAAGTAATACTGAAATGTTG+AGG - chr1_3:26977942-26977961 None:intergenic 25.0%
!!! TTGTATTGGTTTATGTTATC+AGG + chr1_3:26978027-26978046 Msa0112340:intron 25.0%
! TTAAGCTATTTATCCAAACA+TGG + chr1_3:26978409-26978428 Msa0112340:intron 25.0%
! AGATTAATATAGACCATGTT+TGG - chr1_3:26978425-26978444 None:intergenic 25.0%
! TAACTACATTTCAGAAAAAC+TGG + chr1_3:26978543-26978562 Msa0112340:intron 25.0%
! TTGTACACACAAAAAAAGTA+GGG - chr1_3:26978721-26978740 None:intergenic 25.0%
! ATTGTACACACAAAAAAAGT+AGG - chr1_3:26978722-26978741 None:intergenic 25.0%
! TGTGTACAATATATCATTGA+TGG + chr1_3:26978732-26978751 Msa0112340:three_prime_UTR 25.0%
! TTGATTTCATAGTAAACCTT+AGG + chr1_3:26978831-26978850 Msa0112340:three_prime_UTR 25.0%
!!! CTTGTTTTTGTGTTGAACTT+GGG - chr1_3:26969550-26969569 None:intergenic 30.0%
!!! TCTTGTTTTTGTGTTGAACT+TGG - chr1_3:26969551-26969570 None:intergenic 30.0%
! CATTTTTCTTTATGTGTGGT+TGG - chr1_3:26969648-26969667 None:intergenic 30.0%
AATATTGCAAATGAAAGAGG+AGG - chr1_3:26969757-26969776 None:intergenic 30.0%
AAACTTACATGGAGATAAAG+TGG - chr1_3:26969818-26969837 None:intergenic 30.0%
! TTCAATATCTTGGTTTGACT+TGG + chr1_3:26969839-26969858 Msa0112340:intron 30.0%
AATTGGATATCCAATTCAAG+TGG + chr1_3:26969963-26969982 Msa0112340:intron 30.0%
ATTGGATATCCAATTCAAGT+GGG + chr1_3:26969964-26969983 Msa0112340:intron 30.0%
TCAATGTTGTTCTTATTGGT+TGG + chr1_3:26970056-26970075 Msa0112340:intron 30.0%
AAGGTCTAAATAGTAATCAC+TGG - chr1_3:26970481-26970500 None:intergenic 30.0%
!! ATTTGTCAGGATTTGAGTTT+TGG + chr1_3:26970536-26970555 Msa0112340:intron 30.0%
!! TGGTCTTAACATTGTTTTGT+TGG + chr1_3:26970556-26970575 Msa0112340:intron 30.0%
!! ACATTGTTTTGTTGGCATAA+TGG + chr1_3:26970564-26970583 Msa0112340:intron 30.0%
ACAAGTTTGAATTCGAAAGT+CGG - chr1_3:26970622-26970641 None:intergenic 30.0%
AAGACAGCAATTAATTGACA+AGG - chr1_3:26970774-26970793 None:intergenic 30.0%
! TTGGGATTTTATAAGTGTAG+CGG + chr1_3:26970883-26970902 Msa0112340:intron 30.0%
AAAAATAGGCTTAGATGGTT+TGG + chr1_3:26971015-26971034 Msa0112340:intron 30.0%
AAAATAGGCTTAGATGGTTT+GGG + chr1_3:26971016-26971035 Msa0112340:intron 30.0%
!! ACTCAGTTATTTCTCTCTTT+AGG + chr1_3:26971212-26971231 Msa0112340:intron 30.0%
TAATCCTTAATTGTTCCCAA+TGG - chr1_3:26971355-26971374 None:intergenic 30.0%
CATTCCATATGTGTGATATT+AGG - chr1_3:26971399-26971418 None:intergenic 30.0%
GAATGAGTTAACATGTCATT+AGG + chr1_3:26971476-26971495 Msa0112340:intron 30.0%
AATGTGAGTTTGATCATTCA+TGG + chr1_3:26971526-26971545 Msa0112340:intron 30.0%
! ACACTATGTTCTTTTGTTAG+AGG + chr1_3:26971800-26971819 Msa0112340:intron 30.0%
! GCCATTATACATGAACATTT+TGG + chr1_3:26971847-26971866 Msa0112340:intron 30.0%
TGGTATTAAAGCAAACACAA+CGG + chr1_3:26971867-26971886 Msa0112340:intron 30.0%
AACTTGATTATGAAGGATGA+TGG + chr1_3:26971907-26971926 Msa0112340:intron 30.0%
TCAAGTAAAGGCTCAATAAT+AGG + chr1_3:26972014-26972033 Msa0112340:intron 30.0%
CATGAAAAGTTGGAAATAGA+TGG + chr1_3:26972051-26972070 Msa0112340:intron 30.0%
!! ATGGAACATATCTGAGATTT+TGG + chr1_3:26972070-26972089 Msa0112340:intron 30.0%
ATGCTGAAGAAGTAGTATAT+TGG - chr1_3:26972105-26972124 None:intergenic 30.0%
AAGCGAATAATTTCTGTTAC+AGG - chr1_3:26972346-26972365 None:intergenic 30.0%
CAAGGAGAATTCTGTTATAT+AGG - chr1_3:26972399-26972418 None:intergenic 30.0%
AGGAAATTCATAAGGGATTA+TGG - chr1_3:26972506-26972525 None:intergenic 30.0%
TCACAGTAGGAAATTCATAA+GGG - chr1_3:26972513-26972532 None:intergenic 30.0%
AACATGTTAAAGGAGTAACA+TGG - chr1_3:26972553-26972572 None:intergenic 30.0%
! GTTACTCCTTTAACATGTTT+TGG + chr1_3:26972554-26972573 Msa0112340:intron 30.0%
CATGTTGAGGAAATTCATTA+TGG - chr1_3:26972836-26972855 None:intergenic 30.0%
CATAATGAATTTCCTCAACA+TGG + chr1_3:26972834-26972853 Msa0112340:intron 30.0%
GAACACTTAGTAAATCCATT+TGG - chr1_3:26972913-26972932 None:intergenic 30.0%
!! ATGATGTCTAAATGCTGTTT+TGG + chr1_3:26972945-26972964 Msa0112340:intron 30.0%
!!! TGATGTCTAAATGCTGTTTT+GGG + chr1_3:26972946-26972965 Msa0112340:intron 30.0%
! TGGTACCCTTAATTTAAGTT+AGG + chr1_3:26972997-26973016 Msa0112340:intron 30.0%
CCAAGCCTAACTTAAATTAA+GGG - chr1_3:26973005-26973024 None:intergenic 30.0%
TCCAAGCCTAACTTAAATTA+AGG - chr1_3:26973006-26973025 None:intergenic 30.0%
CAATATGATTGTCAACAGAA+GGG - chr1_3:26973087-26973106 None:intergenic 30.0%
TCAATATGATTGTCAACAGA+AGG - chr1_3:26973088-26973107 None:intergenic 30.0%
!! TGGATTTGTTAGCTTCTAAT+GGG - chr1_3:26973301-26973320 None:intergenic 30.0%
!! ATGGATTTGTTAGCTTCTAA+TGG - chr1_3:26973302-26973321 None:intergenic 30.0%
TGATTTAGATGGCATAAATG+TGG - chr1_3:26973333-26973352 None:intergenic 30.0%
CATTGAATAAGGAGAAATGA+AGG - chr1_3:26973376-26973395 None:intergenic 30.0%
TCCTTATTCAATGATCATTC+AGG + chr1_3:26973383-26973402 Msa0112340:intron 30.0%
CCTTATTCAATGATCATTCA+GGG + chr1_3:26973384-26973403 Msa0112340:intron 30.0%
TACATCTACCATTATGAGAA+TGG + chr1_3:26973476-26973495 Msa0112340:intron 30.0%
ACATCTACCATTATGAGAAT+GGG + chr1_3:26973477-26973496 Msa0112340:intron 30.0%
TCTTGAAAAAGTGAATGGTT+GGG + chr1_3:26973983-26974002 Msa0112340:intron 30.0%
ATTGGAAATAAACCTTTGCA+CGG + chr1_3:26974061-26974080 Msa0112340:intron 30.0%
ATGAAATGGTGAATCTCAAA+TGG - chr1_3:26974316-26974335 None:intergenic 30.0%
TTCTCAGTTATACTGTCATT+TGG - chr1_3:26974468-26974487 None:intergenic 30.0%
ATGACAGTATAACTGAGAAA+AGG + chr1_3:26974469-26974488 Msa0112340:intron 30.0%
! AGGAATGATAGTGTTATTGA+CGG + chr1_3:26974517-26974536 Msa0112340:intron 30.0%
!! TACTGCAAAATCTGCTATTT+TGG - chr1_3:26974588-26974607 None:intergenic 30.0%
!! ATTTTCAGTCATCTGGAATT+TGG + chr1_3:26974655-26974674 Msa0112340:intron 30.0%
GAATATAAAAGGGGTAGAAT+CGG + chr1_3:26974829-26974848 Msa0112340:intron 30.0%
AATGCATATTCTTAAGTCAC+TGG + chr1_3:26975240-26975259 Msa0112340:intron 30.0%
TTTATACAGGAAGTCAGAAA+CGG - chr1_3:26975421-26975440 None:intergenic 30.0%
! TCCTGATTTTACATGTATGT+AGG + chr1_3:26975449-26975468 Msa0112340:intron 30.0%
AAACAATTTAGAGGAATGCT+AGG + chr1_3:26975484-26975503 Msa0112340:intron 30.0%
GATTTCTACACAAGTTACAA+TGG - chr1_3:26975726-26975745 None:intergenic 30.0%
TTGCGATTAACTAACAAGTT+AGG - chr1_3:26975779-26975798 None:intergenic 30.0%
AATTGGTAAGAAAGTCCTAA+AGG - chr1_3:26975846-26975865 None:intergenic 30.0%
!!! TATATTGACCAGGTTTTGTT+AGG + chr1_3:26975993-26976012 Msa0112340:intron 30.0%
TCAATCCTATCTGTTGTAAT+TGG + chr1_3:26976041-26976060 Msa0112340:CDS 30.0%
CTAAAGACATACTGAAATAC+AGG - chr1_3:26976145-26976164 None:intergenic 30.0%
TTGATATTATGTGGATGAGT+TGG + chr1_3:26976266-26976285 Msa0112340:intron 30.0%
CACTTTGATTAGAGAGAAAA+AGG - chr1_3:26976867-26976886 None:intergenic 30.0%
AATATAGATTCACCATCCAT+TGG + chr1_3:26976888-26976907 Msa0112340:intron 30.0%
!! TTCTAAAATCCACTTTCCAA+TGG - chr1_3:26976907-26976926 None:intergenic 30.0%
GTTTATAAAGATGCTGAACA+GGG - chr1_3:26976958-26976977 None:intergenic 30.0%
AGTTTATAAAGATGCTGAAC+AGG - chr1_3:26976959-26976978 None:intergenic 30.0%
! CATCTTCAATAAGCAGTTTT+TGG + chr1_3:26977034-26977053 Msa0112340:intron 30.0%
AATAGCGAAGAAAGATTGAT+AGG - chr1_3:26977067-26977086 None:intergenic 30.0%
CCTTCAAAGGATGTTAAAAA+CGG + chr1_3:26977305-26977324 Msa0112340:CDS 30.0%
AACCAGACATTGTTATACAT+GGG - chr1_3:26977400-26977419 None:intergenic 30.0%
AAACTTGACAATAAGAGAAC+GGG - chr1_3:26977567-26977586 None:intergenic 30.0%
ATATGTTTGGATGGGATATA+TGG + chr1_3:26977611-26977630 Msa0112340:intron 30.0%
!!! GTCTTGTATTTTTTGCTGTA+AGG + chr1_3:26977760-26977779 Msa0112340:intron 30.0%
AGTAATACTGAAATGTTGAG+GGG - chr1_3:26977940-26977959 None:intergenic 30.0%
TCAGAATCAAGCATTTGTAT+TGG + chr1_3:26978013-26978032 Msa0112340:intron 30.0%
AGTAATATTTACAGTCTCCT+TGG + chr1_3:26978446-26978465 Msa0112340:intron 30.0%
GTAATATTTACAGTCTCCTT+GGG + chr1_3:26978447-26978466 Msa0112340:intron 30.0%
TAATATTTACAGTCTCCTTG+GGG + chr1_3:26978448-26978467 Msa0112340:intron 30.0%
!! TTTCTGAAATGTAGTTAGCA+AGG - chr1_3:26978540-26978559 None:intergenic 30.0%
AACTCACTTTATCTTTCATC+AGG + chr1_3:26978619-26978638 Msa0112340:intron 30.0%
!! TTTCATCAGGTTGGTTATTT+GGG + chr1_3:26978632-26978651 Msa0112340:intron 30.0%
GAATCAAAAAACACCGAAAA+AGG - chr1_3:26978690-26978709 None:intergenic 30.0%
TTTCTATGTTCTCTCATCAT+TGG - chr1_3:26978789-26978808 None:intergenic 30.0%
!! ATGTCAATAATTTGCTCCTA+AGG - chr1_3:26978850-26978869 None:intergenic 30.0%
TTAGGAGCAAATTATTGACA+TGG + chr1_3:26978849-26978868 Msa0112340:three_prime_UTR 30.0%
! TTATGTGTGGTTGGGATTTT+GGG - chr1_3:26969639-26969658 None:intergenic 35.0%
! TTTATGTGTGGTTGGGATTT+TGG - chr1_3:26969640-26969659 None:intergenic 35.0%
CCAGAGAAATAAGTACAAGA+TGG - chr1_3:26969790-26969809 None:intergenic 35.0%
! CCATCTTGTACTTATTTCTC+TGG + chr1_3:26969787-26969806 Msa0112340:CDS 35.0%
!! TGTTATGTTCTGGAAAGTAC+TGG + chr1_3:26969915-26969934 Msa0112340:intron 35.0%
ATGCTAAGATTCTGTGCAAT+TGG + chr1_3:26969946-26969965 Msa0112340:intron 35.0%
AGTAAGATGCAGACAGAAAT+TGG + chr1_3:26970283-26970302 Msa0112340:intron 35.0%
GTAAGATGCAGACAGAAATT+GGG + chr1_3:26970284-26970303 Msa0112340:intron 35.0%
TAAGATGCAGACAGAAATTG+GGG + chr1_3:26970285-26970304 Msa0112340:CDS 35.0%
AACGCTAACATTTGATGCTT+GGG - chr1_3:26970339-26970358 None:intergenic 35.0%
AATTTCTGTCAGAGACATTC+TGG - chr1_3:26970400-26970419 None:intergenic 35.0%
TGACAAATTCCTAAGCTACT+TGG - chr1_3:26970524-26970543 None:intergenic 35.0%
AAGTAGCTTAGGAATTTGTC+AGG + chr1_3:26970523-26970542 Msa0112340:intron 35.0%
AAGTTTGAATTCGAAAGTCG+GGG - chr1_3:26970620-26970639 None:intergenic 35.0%
CAAGTTTGAATTCGAAAGTC+GGG - chr1_3:26970621-26970640 None:intergenic 35.0%
ATTGACAAGGAGAAAGAGTA+TGG - chr1_3:26970761-26970780 None:intergenic 35.0%
CTAGTTGTCAGAAATGTTAG+TGG + chr1_3:26970820-26970839 Msa0112340:intron 35.0%
TTGTCAGAAATGTTAGTGGA+AGG + chr1_3:26970824-26970843 Msa0112340:intron 35.0%
AGACTAGACATGATAGGATT+AGG + chr1_3:26970936-26970955 Msa0112340:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG + chr1_3:26970988-26971007 Msa0112340:intron 35.0%
ATGGTGTATGATAGAACACT+AGG + chr1_3:26971104-26971123 Msa0112340:intron 35.0%
TGGTGTATGATAGAACACTA+GGG + chr1_3:26971105-26971124 Msa0112340:intron 35.0%
!! CAGTTATTTCTCTCTTTAGG+AGG + chr1_3:26971215-26971234 Msa0112340:intron 35.0%
TATGAGACATATTGCATGGA+GGG - chr1_3:26971250-26971269 None:intergenic 35.0%
TCCCAATGGTGATATGAATA+CGG - chr1_3:26971341-26971360 None:intergenic 35.0%
ATCACCATTGGGAACAATTA+AGG + chr1_3:26971348-26971367 Msa0112340:intron 35.0%
!! TCTATAGCTTTTGTGCTGTT+TGG + chr1_3:26971626-26971645 Msa0112340:CDS 35.0%
TCACTAATAGCGTTTGTGAA+AGG + chr1_3:26971665-26971684 Msa0112340:CDS 35.0%
!! TGGCCGTTTTATACTTAAGT+AGG - chr1_3:26971831-26971850 None:intergenic 35.0%
TAAGAGTTTCTATGACCAAG+TGG - chr1_3:26971956-26971975 None:intergenic 35.0%
GCATCTCAAAGATCAAATCA+TGG + chr1_3:26972121-26972140 Msa0112340:intron 35.0%
CTCAAAGATCAAATCATGGT+CGG + chr1_3:26972125-26972144 Msa0112340:intron 35.0%
GTAGAGAGTTATCTATTCTC+TGG - chr1_3:26972324-26972343 None:intergenic 35.0%
ATGAGAAGAAATACAGTGCA+AGG - chr1_3:26972417-26972436 None:intergenic 35.0%
GTCACAGTAGGAAATTCATA+AGG - chr1_3:26972514-26972533 None:intergenic 35.0%
AAAGGAGTAACATGGTTTCT+CGG - chr1_3:26972545-26972564 None:intergenic 35.0%
CTCATCCCAAAACATGTTAA+AGG - chr1_3:26972563-26972582 None:intergenic 35.0%
AAATCTTCTGTGTTGTACTC+CGG - chr1_3:26972689-26972708 None:intergenic 35.0%
! CATATGTAAGTGTTGCAAGA+GGG + chr1_3:26972768-26972787 Msa0112340:intron 35.0%
ATTCATGAGTGCTTGAAAAG+TGG + chr1_3:26972870-26972889 Msa0112340:intron 35.0%
TGGATTTACTAAGTGTTCGT+AGG + chr1_3:26972915-26972934 Msa0112340:intron 35.0%
GGATTTACTAAGTGTTCGTA+GGG + chr1_3:26972916-26972935 Msa0112340:intron 35.0%
ACAGCATTTAGACATCATGA+GGG - chr1_3:26972943-26972962 None:intergenic 35.0%
AACAGCATTTAGACATCATG+AGG - chr1_3:26972944-26972963 None:intergenic 35.0%
! CCCTTAATTTAAGTTAGGCT+TGG + chr1_3:26973002-26973021 Msa0112340:intron 35.0%
CGACTTAAGCATGTTATAGA+AGG - chr1_3:26973158-26973177 None:intergenic 35.0%
! GAAAGAAAAGTGGTAATGTG+AGG - chr1_3:26973208-26973227 None:intergenic 35.0%
GTTCCAATTTAACACCAAGT+GGG - chr1_3:26973243-26973262 None:intergenic 35.0%
! ATTTGTTAGCTTCTAATGGG+GGG - chr1_3:26973298-26973317 None:intergenic 35.0%
!! GATTTGTTAGCTTCTAATGG+GGG - chr1_3:26973299-26973318 None:intergenic 35.0%
!! GGATTTGTTAGCTTCTAATG+GGG - chr1_3:26973300-26973319 None:intergenic 35.0%
!! CATAAATGTGGTAATGGGTA+TGG - chr1_3:26973321-26973340 None:intergenic 35.0%
GATGGCATAAATGTGGTAAT+GGG - chr1_3:26973326-26973345 None:intergenic 35.0%
AGATGGCATAAATGTGGTAA+TGG - chr1_3:26973327-26973346 None:intergenic 35.0%
!! GCTTTGCTGTTTGATTTAGA+TGG - chr1_3:26973344-26973363 None:intergenic 35.0%
AAGGAGAAATGAAGGTTAGT+GGG - chr1_3:26973368-26973387 None:intergenic 35.0%
TAAGGAGAAATGAAGGTTAG+TGG - chr1_3:26973369-26973388 None:intergenic 35.0%
CCCTGAATGATCATTGAATA+AGG - chr1_3:26973387-26973406 None:intergenic 35.0%
ATTGAGCATCAAAATGAAGG+AGG - chr1_3:26973648-26973667 None:intergenic 35.0%
CCAATTGAGCATCAAAATGA+AGG - chr1_3:26973651-26973670 None:intergenic 35.0%
!! CCTTCATTTTGATGCTCAAT+TGG + chr1_3:26973648-26973667 Msa0112340:intron 35.0%
! CTCTTTCCTGAGATCTATTT+TGG + chr1_3:26973795-26973814 Msa0112340:intron 35.0%
CTCGGATCAACTAATAATAC+CGG - chr1_3:26973898-26973917 None:intergenic 35.0%
TTGATCCGAGTGTATGAATT+CGG + chr1_3:26973908-26973927 Msa0112340:intron 35.0%
TAGGGTCTTGAAAAAGTGAA+TGG + chr1_3:26973978-26973997 Msa0112340:intron 35.0%
GTCTTGAAAAAGTGAATGGT+TGG + chr1_3:26973982-26974001 Msa0112340:intron 35.0%
ATTTCCAATTTCAAGACACG+AGG - chr1_3:26974050-26974069 None:intergenic 35.0%
TTGGAAATAAACCTTTGCAC+GGG + chr1_3:26974062-26974081 Msa0112340:intron 35.0%
TCACAGTGAACATTGGAATT+TGG + chr1_3:26974104-26974123 Msa0112340:intron 35.0%
ATGAGCTCAGGAAAATGAAA+TGG - chr1_3:26974330-26974349 None:intergenic 35.0%
! ATTTTCCTGAGCTCATACTT+TGG + chr1_3:26974334-26974353 Msa0112340:intron 35.0%
!! GTCATTTGGTTTGCGAAAAA+TGG - chr1_3:26974454-26974473 None:intergenic 35.0%
!!! TGCAAAATCTGCTATTTTGG+AGG - chr1_3:26974585-26974604 None:intergenic 35.0%
! GCAGATTTTGCAGTAACAAA+AGG + chr1_3:26974593-26974612 Msa0112340:intron 35.0%
! TAGTCACATTTTCAGTCATC+TGG + chr1_3:26974648-26974667 Msa0112340:intron 35.0%
ATTCTTTATTGCTGCACTCT+TGG + chr1_3:26974935-26974954 Msa0112340:CDS 35.0%
TTGGCAATGCAATATGAGAA+GGG + chr1_3:26974954-26974973 Msa0112340:CDS 35.0%
AATGCAATATGAGAAGGGAT+TGG + chr1_3:26974959-26974978 Msa0112340:CDS 35.0%
! ATAAGTACTGTAGTGAAAGC+TGG - chr1_3:26975029-26975048 None:intergenic 35.0%
! CAAATTCGCTAGTCTATAAC+AGG - chr1_3:26975147-26975166 None:intergenic 35.0%
TTTCCTGTGTACTTTCATGA+CGG + chr1_3:26975171-26975190 Msa0112340:intron 35.0%
!!! TGGAGTGAAGTTGTTTTTCT+AGG - chr1_3:26975395-26975414 None:intergenic 35.0%
CATGTAAAATCAGGAATGCA+TGG - chr1_3:26975444-26975463 None:intergenic 35.0%
GCCTACATACATGTAAAATC+AGG - chr1_3:26975453-26975472 None:intergenic 35.0%
! TCCAACACACTCTTTTTGAT+TGG + chr1_3:26975530-26975549 Msa0112340:intron 35.0%
! ACCAATCAAAAAGAGTGTGT+TGG - chr1_3:26975534-26975553 None:intergenic 35.0%
!! TAGCTATTCTGGAGATCTTT+TGG + chr1_3:26975601-26975620 Msa0112340:intron 35.0%
! ATCTAGCTTCATACTCCTTT+AGG + chr1_3:26975828-26975847 Msa0112340:intron 35.0%
!!! CAGGTTTTGTTAGGATCAAT+GGG + chr1_3:26976002-26976021 Msa0112340:intron 35.0%
CCTATTCGAACTTACTTGTT+TGG - chr1_3:26976097-26976116 None:intergenic 35.0%
CCAAACAAGTAAGTTCGAAT+AGG + chr1_3:26976094-26976113 Msa0112340:intron 35.0%
TGAAATTGTGATAGTAGACG+AGG - chr1_3:26976523-26976542 None:intergenic 35.0%
TTTGTCGAGTAAACCAACAA+GGG - chr1_3:26976574-26976593 None:intergenic 35.0%
CAAATCAAGAATGTATGCCT+AGG + chr1_3:26976611-26976630 Msa0112340:intron 35.0%
!! TTAGTTTTTATCTCCTTGCC+AGG + chr1_3:26976725-26976744 Msa0112340:intron 35.0%
AAAATCCACTTTCCAATGGA+TGG - chr1_3:26976903-26976922 None:intergenic 35.0%
! TGTAACTTGCATTCAACTCT+GGG - chr1_3:26976931-26976950 None:intergenic 35.0%
!! CCGTTTTTAACATCCTTTGA+AGG - chr1_3:26977308-26977327 None:intergenic 35.0%
ATCCCATGTATAACAATGTC+TGG + chr1_3:26977395-26977414 Msa0112340:intron 35.0%
CAACCAGACATTGTTATACA+TGG - chr1_3:26977401-26977420 None:intergenic 35.0%
TTTCTTAGGGAAATGCTAAC+AGG + chr1_3:26977429-26977448 Msa0112340:intron 35.0%
TTCTTAGGGAAATGCTAACA+GGG + chr1_3:26977430-26977449 Msa0112340:intron 35.0%
GGTTATGTTAAGTGTCCTAA+GGG - chr1_3:26977546-26977565 None:intergenic 35.0%
! ACAGTTCGGTGATATATGTT+TGG + chr1_3:26977598-26977617 Msa0112340:intron 35.0%
TTCGGTGATATATGTTTGGA+TGG + chr1_3:26977602-26977621 Msa0112340:intron 35.0%
TCGGTGATATATGTTTGGAT+GGG + chr1_3:26977603-26977622 Msa0112340:intron 35.0%
CATTTATACCTCTAACCATG+TGG + chr1_3:26977671-26977690 Msa0112340:intron 35.0%
!!! GAAGATATTTTGGAACCACA+TGG - chr1_3:26977689-26977708 None:intergenic 35.0%
TGTGGTTCCAAAATATCTTC+AGG + chr1_3:26977689-26977708 Msa0112340:intron 35.0%
CAAATCCTCTTGAGATTCTT+TGG + chr1_3:26977727-26977746 Msa0112340:CDS 35.0%
GATTTCCAAAGAATCTCAAG+AGG - chr1_3:26977735-26977754 None:intergenic 35.0%
!! CAATTGTTGCAAGCATTGAA+CGG - chr1_3:26978098-26978117 None:intergenic 35.0%
! ATCGACAGTTTTGCTTTATG+TGG + chr1_3:26978162-26978181 Msa0112340:intron 35.0%
! TCGACAGTTTTGCTTTATGT+GGG + chr1_3:26978163-26978182 Msa0112340:intron 35.0%
CACTTTATCTTTCATCAGGT+TGG + chr1_3:26978623-26978642 Msa0112340:intron 35.0%
!! CTTTCATCAGGTTGGTTATT+TGG + chr1_3:26978631-26978650 Msa0112340:intron 35.0%
!! TTTGCTATAGCCACCTTTTT+CGG + chr1_3:26978674-26978693 Msa0112340:CDS 35.0%
TCAAAAAACACCGAAAAAGG+TGG - chr1_3:26978687-26978706 None:intergenic 35.0%
GCAAATTATTGACATGGTGA+TGG + chr1_3:26978855-26978874 Msa0112340:three_prime_UTR 35.0%
TCGAATGTTCTGCTAAGCTA+AGG - chr1_3:26969577-26969596 None:intergenic 40.0%
TCATACACCCTTGATTCCAA+AGG + chr1_3:26969726-26969745 Msa0112340:CDS 40.0%
CATACACCCTTGATTCCAAA+GGG + chr1_3:26969727-26969746 Msa0112340:CDS 40.0%
!!! GGTTTTCCCTTTGGAATCAA+GGG - chr1_3:26969736-26969755 None:intergenic 40.0%
!!! AGGTTTTCCCTTTGGAATCA+AGG - chr1_3:26969737-26969756 None:intergenic 40.0%
TGGATTTGACCCACTTGAAT+TGG - chr1_3:26969976-26969995 None:intergenic 40.0%
CTAAATTAGCCCACCCAAAT+TGG - chr1_3:26970149-26970168 None:intergenic 40.0%
CAACGCTAACATTTGATGCT+TGG - chr1_3:26970340-26970359 None:intergenic 40.0%
CAAGCATCAAATGTTAGCGT+TGG + chr1_3:26970338-26970357 Msa0112340:CDS 40.0%
! ATCAAATGTTAGCGTTGGAC+CGG + chr1_3:26970343-26970362 Msa0112340:CDS 40.0%
TTATTGCTTCCATAATCCCC+CGG - chr1_3:26970365-26970384 None:intergenic 40.0%
CATCTCACTAGCACATGTAA+AGG - chr1_3:26970500-26970519 None:intergenic 40.0%
GCTGTTATCAAATTGGAGCT+TGG + chr1_3:26970675-26970694 Msa0112340:intron 40.0%
! TTTACTCTTGGATTGGATGC+TGG + chr1_3:26970856-26970875 Msa0112340:intron 40.0%
! TTACTCTTGGATTGGATGCT+GGG + chr1_3:26970857-26970876 Msa0112340:intron 40.0%
! TTATAAGTGTAGCGGAGATG+AGG + chr1_3:26970891-26970910 Msa0112340:intron 40.0%
TGACCTCTAAATCCTTACGA+CGG - chr1_3:26971067-26971086 None:intergenic 40.0%
GGATTTAGAGGTCAATGAGT+TGG + chr1_3:26971073-26971092 Msa0112340:intron 40.0%
GTTCTATCATACACCATACG+TGG - chr1_3:26971101-26971120 None:intergenic 40.0%
CGTAATTTGATCCATGTAGC+CGG + chr1_3:26971128-26971147 Msa0112340:intron 40.0%
! AAGCTTTATCCCACTAAGTG+GGG - chr1_3:26971154-26971173 None:intergenic 40.0%
! CAAGCTTTATCCCACTAAGT+GGG - chr1_3:26971155-26971174 None:intergenic 40.0%
GTATGAGACATATTGCATGG+AGG - chr1_3:26971251-26971270 None:intergenic 40.0%
CCAGTATGAGACATATTGCA+TGG - chr1_3:26971254-26971273 None:intergenic 40.0%
CCATGCAATATGTCTCATAC+TGG + chr1_3:26971251-26971270 Msa0112340:intron 40.0%
! TTCTGTATCTCTTTTGTCCC+AGG - chr1_3:26971286-26971305 None:intergenic 40.0%
GCCGTATTCATATCACCATT+GGG + chr1_3:26971337-26971356 Msa0112340:intron 40.0%
TGTGTGATATTAGGGAGCAA+GGG - chr1_3:26971390-26971409 None:intergenic 40.0%
ATGTGTGATATTAGGGAGCA+AGG - chr1_3:26971391-26971410 None:intergenic 40.0%
GCTCCCTAATATCACACATA+TGG + chr1_3:26971392-26971411 Msa0112340:intron 40.0%
AAAGCTATAGAGACGGGATA+AGG - chr1_3:26971617-26971636 None:intergenic 40.0%
AGCACAAAAGCTATAGAGAC+GGG - chr1_3:26971623-26971642 None:intergenic 40.0%
CAGCACAAAAGCTATAGAGA+CGG - chr1_3:26971624-26971643 None:intergenic 40.0%
CTAATAGCGTTTGTGAAAGG+AGG + chr1_3:26971668-26971687 Msa0112340:CDS 40.0%
ATTGCTGCAAGAACTGATGA+AGG - chr1_3:26971695-26971714 None:intergenic 40.0%
CTTGCAGCAATTGCAAAATC+AGG + chr1_3:26971704-26971723 Msa0112340:CDS 40.0%
!! TGTTTCTGAAATCGGTGACA+AGG + chr1_3:26971754-26971773 Msa0112340:CDS 40.0%
AGATCAAACTCTTCTCCACT+TGG + chr1_3:26971938-26971957 Msa0112340:intron 40.0%
AACCAGATCGCTGTATAACA+TGG + chr1_3:26972192-26972211 Msa0112340:intron 40.0%
TTCCATGTTATACAGCGATC+TGG - chr1_3:26972197-26972216 None:intergenic 40.0%
GAGAGTTATCTATTCTCTGG+AGG - chr1_3:26972321-26972340 None:intergenic 40.0%
GGAATCAAGTAAGTAGAGAG+GGG - chr1_3:26972377-26972396 None:intergenic 40.0%
GGGAATCAAGTAAGTAGAGA+GGG - chr1_3:26972378-26972397 None:intergenic 40.0%
AGGGAATCAAGTAAGTAGAG+AGG - chr1_3:26972379-26972398 None:intergenic 40.0%
GCAGGAAAGGAATAATGAGA+CGG - chr1_3:26972450-26972469 None:intergenic 40.0%
CATAAGGGATTATGGCAAGT+TGG - chr1_3:26972498-26972517 None:intergenic 40.0%
ACTACCCTTTCCTTGCAAAA+TGG + chr1_3:26972661-26972680 Msa0112340:intron 40.0%
CTACCCTTTCCTTGCAAAAT+GGG + chr1_3:26972662-26972681 Msa0112340:intron 40.0%
TACCCTTTCCTTGCAAAATG+GGG + chr1_3:26972663-26972682 Msa0112340:intron 40.0%
CCTCTTGCAACACTTACATA+TGG - chr1_3:26972770-26972789 None:intergenic 40.0%
! CCATATGTAAGTGTTGCAAG+AGG + chr1_3:26972767-26972786 Msa0112340:intron 40.0%
AAGTCTTCAAACCCATGTTG+AGG - chr1_3:26972849-26972868 None:intergenic 40.0%
ATGAGTGCTTGAAAAGTGGA+TGG + chr1_3:26972874-26972893 Msa0112340:intron 40.0%
CAGCATTTAGACATCATGAG+GGG - chr1_3:26972942-26972961 None:intergenic 40.0%
!! TTAAGGGTACCACAAAGTGA+GGG - chr1_3:26972989-26973008 None:intergenic 40.0%
!! ATTAAGGGTACCACAAAGTG+AGG - chr1_3:26972990-26973009 None:intergenic 40.0%
CTTCTATTGGGTGAGTTGTA+CGG - chr1_3:26973041-26973060 None:intergenic 40.0%
!! ACAGAAGGGTATTTCTCACA+GGG - chr1_3:26973073-26973092 None:intergenic 40.0%
!! AACAGAAGGGTATTTCTCAC+AGG - chr1_3:26973074-26973093 None:intergenic 40.0%
AGAAATACCCTTCTGTTGAC+AGG + chr1_3:26973077-26973096 Msa0112340:intron 40.0%
GGTTCCAATTTAACACCAAG+TGG - chr1_3:26973244-26973263 None:intergenic 40.0%
ATTAGGCAAAACATGCGATG+GGG - chr1_3:26973265-26973284 None:intergenic 40.0%
GATTAGGCAAAACATGCGAT+GGG - chr1_3:26973266-26973285 None:intergenic 40.0%
TGATTAGGCAAAACATGCGA+TGG - chr1_3:26973267-26973286 None:intergenic 40.0%
!! ACTTCATCTCCAAGAGTGTT+GGG - chr1_3:26973444-26973463 None:intergenic 40.0%
! AACTTCATCTCCAAGAGTGT+TGG - chr1_3:26973445-26973464 None:intergenic 40.0%
CCACAAATGATGAGCTCAAA+GGG - chr1_3:26973518-26973537 None:intergenic 40.0%
TCCCTGCAAACAAGTAGTTA+AGG + chr1_3:26973549-26973568 Msa0112340:intron 40.0%
GCCTTAACTACTTGTTTGCA+GGG - chr1_3:26973553-26973572 None:intergenic 40.0%
AGCCTTAACTACTTGTTTGC+AGG - chr1_3:26973554-26973573 None:intergenic 40.0%
CATCAAAATGAAGGAGGAGA+AGG - chr1_3:26973642-26973661 None:intergenic 40.0%
AAAGGACTCTGTTACAAGTG+TGG - chr1_3:26973710-26973729 None:intergenic 40.0%
TGTGAGACATTCATCCTACT+AGG - chr1_3:26973753-26973772 None:intergenic 40.0%
! GGATGAATGTCTCACACTTT+TGG + chr1_3:26973757-26973776 Msa0112340:intron 40.0%
CTAGCACCAAAATAGATCTC+AGG - chr1_3:26973804-26973823 None:intergenic 40.0%
!!! GAGCGATTGGTTTTACGTTT+GGG - chr1_3:26973863-26973882 None:intergenic 40.0%
!!! CTTTTTCAAGACCCTATGCT+GGG - chr1_3:26973974-26973993 None:intergenic 40.0%
!!! ACTTTTTCAAGACCCTATGC+TGG - chr1_3:26973975-26973994 None:intergenic 40.0%
GGGATATTCACAGTGAACAT+TGG + chr1_3:26974097-26974116 Msa0112340:intron 40.0%
GAAACTTTGTGCAGTCTTCA+GGG - chr1_3:26974176-26974195 None:intergenic 40.0%
GATCGGTAACAGTGAGAAAT+CGG - chr1_3:26974219-26974238 None:intergenic 40.0%
TCTGCAAAATGAATTGCCTC+TGG + chr1_3:26974255-26974274 Msa0112340:intron 40.0%
CTGCAAAATGAATTGCCTCT+GGG + chr1_3:26974256-26974275 Msa0112340:intron 40.0%
! TCAAATGGACTCGTGTCAAT+AGG - chr1_3:26974301-26974320 None:intergenic 40.0%
TCTGCTAAAACGTTGATCCT+TGG + chr1_3:26974384-26974403 Msa0112340:intron 40.0%
! TGATAGTGTTATTGACGGTG+AGG + chr1_3:26974522-26974541 Msa0112340:intron 40.0%
! GATAGTGTTATTGACGGTGA+GGG + chr1_3:26974523-26974542 Msa0112340:intron 40.0%
TAAAAGGGGTAGAATCGGTA+AGG + chr1_3:26974834-26974853 Msa0112340:intron 40.0%
GTGCAGCAATAAAGAATGTC+TGG - chr1_3:26974932-26974951 None:intergenic 40.0%
CTTGGCAATGCAATATGAGA+AGG + chr1_3:26974953-26974972 Msa0112340:CDS 40.0%
TCTACTAGGCTATGTGGTAA+AGG + chr1_3:26975196-26975215 Msa0112340:intron 40.0%
CAGGAATGCATGGTTTATAC+AGG - chr1_3:26975434-26975453 None:intergenic 40.0%
TATATGGGACCCACATGATT+TGG - chr1_3:26975577-26975596 None:intergenic 40.0%
CCATTGATCCTAACAAAACC+TGG - chr1_3:26976004-26976023 None:intergenic 40.0%
!!! CCAGGTTTTGTTAGGATCAA+TGG + chr1_3:26976001-26976020 Msa0112340:intron 40.0%
TACGGCCAATTACAACAGAT+AGG - chr1_3:26976049-26976068 None:intergenic 40.0%
!! CAGGCACTGATTGAAAGATA+CGG - chr1_3:26976067-26976086 None:intergenic 40.0%
! TTACTTGTTTGGAACTGAGC+AGG - chr1_3:26976086-26976105 None:intergenic 40.0%
TCTTTGTTCTGCATTCTCTC+TGG + chr1_3:26976412-26976431 Msa0112340:intron 40.0%
! GGAGAAAAAGGAACTTTTGG+CGG - chr1_3:26976493-26976512 None:intergenic 40.0%
! AGCGGAGAAAAAGGAACTTT+TGG - chr1_3:26976496-26976515 None:intergenic 40.0%
CTTTGTCGAGTAAACCAACA+AGG - chr1_3:26976575-26976594 None:intergenic 40.0%
GAATGTATGCCTAGGAAGTA+TGG + chr1_3:26976619-26976638 Msa0112340:intron 40.0%
AATAGGACTCCATACTTCCT+AGG - chr1_3:26976631-26976650 None:intergenic 40.0%
! AATTTTCGCGAGTCGTTGAA+AGG - chr1_3:26976654-26976673 None:intergenic 40.0%
!! GTTCAACTGGTTTGAGCTAA+GGG - chr1_3:26976779-26976798 None:intergenic 40.0%
!! AGTTCAACTGGTTTGAGCTA+AGG - chr1_3:26976780-26976799 None:intergenic 40.0%
ATTCACCATCCATTGGAAAG+TGG + chr1_3:26976895-26976914 Msa0112340:intron 40.0%
! CTGTAACTTGCATTCAACTC+TGG - chr1_3:26976932-26976951 None:intergenic 40.0%
AAACTCGGAAAGGCTAACAT+AGG - chr1_3:26976987-26977006 None:intergenic 40.0%
ATTGAAGTGGAAACTCGGAA+AGG - chr1_3:26976997-26977016 None:intergenic 40.0%
GCTCTATTGAAGTGGAAACT+CGG - chr1_3:26977002-26977021 None:intergenic 40.0%
GATCATACGCTCTATTGAAG+TGG - chr1_3:26977010-26977029 None:intergenic 40.0%
! CTGATCTTTTCTGCTTTGTC+TGG + chr1_3:26977191-26977210 Msa0112340:intron 40.0%
TCAGCTAGTTCATCAAGTTC+AGG - chr1_3:26977344-26977363 None:intergenic 40.0%
AGAGGAGCTTGTGAAAGAAA+AGG + chr1_3:26977367-26977386 Msa0112340:intron 40.0%
TCTTAGGGAAATGCTAACAG+GGG + chr1_3:26977431-26977450 Msa0112340:intron 40.0%
AATCCTTAACAAGTGCCCTT+AGG + chr1_3:26977528-26977547 Msa0112340:intron 40.0%
GGGTTATGTTAAGTGTCCTA+AGG - chr1_3:26977547-26977566 None:intergenic 40.0%
!!! TTTTGGAACCACATGGTTAG+AGG - chr1_3:26977682-26977701 None:intergenic 40.0%
! TGCGATGCCTGAAGATATTT+TGG - chr1_3:26977699-26977718 None:intergenic 40.0%
! AATATCTTCAGGCATCGCAA+CGG + chr1_3:26977700-26977719 Msa0112340:intron 40.0%
!! ATTTGCTGACTGATTTGCCT+AGG + chr1_3:26978062-26978081 Msa0112340:intron 40.0%
!! TGACTGATTTGCCTAGGAAT+GGG + chr1_3:26978068-26978087 Msa0112340:intron 40.0%
GACAGTAGATAAGCTCAAAC+AGG - chr1_3:26978189-26978208 None:intergenic 40.0%
! GCAACATGCATTGCTATTGT+TGG + chr1_3:26978505-26978524 Msa0112340:intron 40.0%
! ACATGCATTGCTATTGTTGG+AGG + chr1_3:26978508-26978527 Msa0112340:intron 40.0%
CACACAAAAAAAGTAGGGCT+TGG - chr1_3:26978716-26978735 None:intergenic 40.0%
TGATATCTACCATTAGAGCC+AGG + chr1_3:26978895-26978914 Msa0112340:three_prime_UTR 40.0%
! GAAAGAGGAGGTTTTCCCTT+TGG - chr1_3:26969745-26969764 None:intergenic 45.0%
! GTTGTTCTTATTGGTTGGCC+TGG + chr1_3:26970061-26970080 Msa0112340:intron 45.0%
GTAGTGTTGTCTTGGGATCT+TGG + chr1_3:26970083-26970102 Msa0112340:intron 45.0%
ACAGAAATTGGGGTTGAGCT+TGG + chr1_3:26970295-26970314 Msa0112340:CDS 45.0%
! TCAAATGTTAGCGTTGGACC+GGG + chr1_3:26970344-26970363 Msa0112340:CDS 45.0%
GTGAGATGACCAAGTAGCTT+AGG + chr1_3:26970512-26970531 Msa0112340:intron 45.0%
! AAGGAGAAAGAGTATGGAGG+AGG - chr1_3:26970755-26970774 None:intergenic 45.0%
! GACAAGGAGAAAGAGTATGG+AGG - chr1_3:26970758-26970777 None:intergenic 45.0%
! TGGATTGGATGCTGGGAAAT+TGG + chr1_3:26970864-26970883 Msa0112340:intron 45.0%
GGATTGGATGCTGGGAAATT+GGG + chr1_3:26970865-26970884 Msa0112340:intron 45.0%
GCGGTAAGACTAGACATGAT+AGG + chr1_3:26970930-26970949 Msa0112340:intron 45.0%
ACACTATTAGAGCGAGAGTG+CGG + chr1_3:26970963-26970982 Msa0112340:intron 45.0%
ATGCCGTCGTAAGGATTTAG+AGG + chr1_3:26971061-26971080 Msa0112340:intron 45.0%
! CAATGAGTTGGATCCACGTA+TGG + chr1_3:26971085-26971104 Msa0112340:intron 45.0%
! CCAAGCTTTATCCCACTAAG+TGG - chr1_3:26971156-26971175 None:intergenic 45.0%
CCACTTAGTGGGATAAAGCT+TGG + chr1_3:26971153-26971172 Msa0112340:intron 45.0%
GGCCGTATTCATATCACCAT+TGG + chr1_3:26971336-26971355 Msa0112340:intron 45.0%
GTGTGATATTAGGGAGCAAG+GGG - chr1_3:26971389-26971408 None:intergenic 45.0%
ACGGGATAAGGAATCTGAGT+AGG - chr1_3:26971605-26971624 None:intergenic 45.0%
CAGACCACACGAAGAAAGAT+GGG - chr1_3:26972472-26972491 None:intergenic 45.0%
ACAGACCACACGAAGAAAGA+TGG - chr1_3:26972473-26972492 None:intergenic 45.0%
!! GAAAGGGTAGTAGTGGATCT+TGG - chr1_3:26972652-26972671 None:intergenic 45.0%
TTGCAAGGAAAGGGTAGTAG+TGG - chr1_3:26972659-26972678 None:intergenic 45.0%
GGTGTGATCATCAACCCAAA+TGG + chr1_3:26972895-26972914 Msa0112340:intron 45.0%
CAAAGTGAGGGTAAGGAGTA+TGG - chr1_3:26972977-26972996 None:intergenic 45.0%
TACTCCTTACCCTCACTTTG+TGG + chr1_3:26972977-26972996 Msa0112340:intron 45.0%
GGGGGTTTGACACTTCTATT+GGG - chr1_3:26973053-26973072 None:intergenic 45.0%
AGGGGGTTTGACACTTCTAT+TGG - chr1_3:26973054-26973073 None:intergenic 45.0%
!! AGAAGGGTATTTCTCACAGG+GGG - chr1_3:26973071-26973090 None:intergenic 45.0%
!! CAGAAGGGTATTTCTCACAG+GGG - chr1_3:26973072-26973091 None:intergenic 45.0%
!! ACAGAAGGGTATTTCTCGCA+GGG - chr1_3:26973122-26973141 None:intergenic 45.0%
!! AACAGAAGGGTATTTCTCGC+AGG - chr1_3:26973123-26973142 None:intergenic 45.0%
AATACCCTTCTGTTGACAGG+TGG + chr1_3:26973129-26973148 Msa0112340:intron 45.0%
!!! CTGGCGCTGCAAAGTTTTTT+GGG - chr1_3:26973182-26973201 None:intergenic 45.0%
GAGCTCAAGGGAAAGAAAAG+TGG - chr1_3:26973218-26973237 None:intergenic 45.0%
CCAATTTAACACCAAGTGGG+TGG - chr1_3:26973240-26973259 None:intergenic 45.0%
!! CCACCCACTTGGTGTTAAAT+TGG + chr1_3:26973237-26973256 Msa0112340:intron 45.0%
AGCTTCTAATGGGGGGATAT+GGG - chr1_3:26973291-26973310 None:intergenic 45.0%
TAGCTTCTAATGGGGGGATA+TGG - chr1_3:26973292-26973311 None:intergenic 45.0%
!! TTCATCTCCAAGAGTGTTGG+GGG - chr1_3:26973442-26973461 None:intergenic 45.0%
!! CTTCATCTCCAAGAGTGTTG+GGG - chr1_3:26973443-26973462 None:intergenic 45.0%
CCCTTTGAGCTCATCATTTG+TGG + chr1_3:26973515-26973534 Msa0112340:intron 45.0%
GCCACAAATGATGAGCTCAA+AGG - chr1_3:26973519-26973538 None:intergenic 45.0%
TACCTCAGCAGCCAAGATAT+CGG + chr1_3:26973598-26973617 Msa0112340:intron 45.0%
!! ATTGGCAGTTTGAGCACTGA+TGG + chr1_3:26973666-26973685 Msa0112340:intron 45.0%
ATCACTGAGAGAAGGCAGAA+AGG - chr1_3:26973728-26973747 None:intergenic 45.0%
TTGGGTCAGAAAGTAGAACC+CGG - chr1_3:26973845-26973864 None:intergenic 45.0%
!!! GGAGCGATTGGTTTTACGTT+TGG - chr1_3:26973864-26973883 None:intergenic 45.0%
ATAATACCGGCCACACACAT+GGG - chr1_3:26973885-26973904 None:intergenic 45.0%
AATAATACCGGCCACACACA+TGG - chr1_3:26973886-26973905 None:intergenic 45.0%
TAGTTGAAACCCAACCCGAA+TGG + chr1_3:26973940-26973959 Msa0112340:intron 45.0%
AGGTATACGCCAATTTGGCT+CGG - chr1_3:26974023-26974042 None:intergenic 45.0%
! GTCAGAGGTATACGCCAATT+TGG - chr1_3:26974028-26974047 None:intergenic 45.0%
ATTTCAAGACACGAGGTCAG+AGG - chr1_3:26974043-26974062 None:intergenic 45.0%
CTGACCTCGTGTCTTGAAAT+TGG + chr1_3:26974043-26974062 Msa0112340:intron 45.0%
CAGTCTTCAGGGAAATGTGT+TGG - chr1_3:26974165-26974184 None:intergenic 45.0%
GGAAACTTTGTGCAGTCTTC+AGG - chr1_3:26974177-26974196 None:intergenic 45.0%
ATCGCACAAAGCAAGGAGAT+CGG - chr1_3:26974236-26974255 None:intergenic 45.0%
TTTGCAGATCGCACAAAGCA+AGG - chr1_3:26974243-26974262 None:intergenic 45.0%
TGAAAGCAGCAAAAACCCAG+AGG - chr1_3:26974274-26974293 None:intergenic 45.0%
TACTTTGGCTGCCATCTACT+TGG + chr1_3:26974349-26974368 Msa0112340:intron 45.0%
GCAAATGCCAACCAAGTAGA+TGG - chr1_3:26974363-26974382 None:intergenic 45.0%
ACCTGTCAGATCTCACAAAG+GGG - chr1_3:26974427-26974446 None:intergenic 45.0%
CACCTGTCAGATCTCACAAA+GGG - chr1_3:26974428-26974447 None:intergenic 45.0%
CTTTGTGAGATCTGACAGGT+GGG + chr1_3:26974427-26974446 Msa0112340:intron 45.0%
TGTAGTGAAAGCTGGAAGAC+AGG - chr1_3:26975021-26975040 None:intergenic 45.0%
! AGACCGTCATGAAAGTACAC+AGG - chr1_3:26975177-26975196 None:intergenic 45.0%
CTTTCATGACGGTCTCTACT+AGG + chr1_3:26975182-26975201 Msa0112340:intron 45.0%
CGTGAGACTGTTAGAGCTTA+TGG - chr1_3:26975669-26975688 None:intergenic 45.0%
CAGATGCATACAACTCAGCT+AGG - chr1_3:26976458-26976477 None:intergenic 45.0%
TGAGCTAAGGGTTAAGGAGT+TGG - chr1_3:26976767-26976786 None:intergenic 45.0%
! CTGGTTTGAGCTAAGGGTTA+AGG - chr1_3:26976773-26976792 None:intergenic 45.0%
TCGGAAAGGCTAACATAGGA+GGG - chr1_3:26976983-26977002 None:intergenic 45.0%
TGCATATTCTCCGATTGGCA+GGG - chr1_3:26977228-26977247 None:intergenic 45.0%
ACTGCTGCATATTCTCCGAT+TGG - chr1_3:26977233-26977252 None:intergenic 45.0%
TGATGAACTAGCTGAAGCAG+AGG + chr1_3:26977349-26977368 Msa0112340:CDS 45.0%
AAATGCTAACAGGGGTCCTT+GGG + chr1_3:26977439-26977458 Msa0112340:intron 45.0%
ACTTCTAAACAAGTGCCCCA+AGG - chr1_3:26977458-26977477 None:intergenic 45.0%
!! TGTCCTAAGGGCACTTGTTA+AGG - chr1_3:26977534-26977553 None:intergenic 45.0%
!! CTGACTGATTTGCCTAGGAA+TGG + chr1_3:26978067-26978086 Msa0112340:intron 45.0%
!! GACTGATTTGCCTAGGAATG+GGG + chr1_3:26978069-26978088 Msa0112340:intron 45.0%
! AGACTGTTTGAGAGAGCGTA+TGG + chr1_3:26978222-26978241 Msa0112340:intron 45.0%
AAGCTATCGTGTAGAGCTTG+CGG - chr1_3:26978289-26978308 None:intergenic 45.0%
!! CATCAGGTTGGTTATTTGGG+TGG + chr1_3:26978635-26978654 Msa0112340:intron 45.0%
! AGGTTGGTTATTTGGGTGGA+GGG + chr1_3:26978639-26978658 Msa0112340:intron 45.0%
CAAAAAAAGTAGGGCTTGGC+AGG - chr1_3:26978712-26978731 None:intergenic 45.0%
GGAAGATACATGCTCGAACA+CGG + chr1_3:26978761-26978780 Msa0112340:three_prime_UTR 45.0%
!! TTCTCAAAGCCTGGCTCTAA+TGG - chr1_3:26978907-26978926 None:intergenic 45.0%
ACAGCTTTCTTCTCAAAGCC+TGG - chr1_3:26978916-26978935 None:intergenic 45.0%
!!! AATAAAAGTATATATTTTTT+TGG + chr1_3:26971564-26971583 Msa0112340:intron 5.0%
!!! ATAAAAGTATATATTTTTTT+GGG + chr1_3:26971565-26971584 Msa0112340:intron 5.0%
! TTGGCCTGGTAGTGTTGTCT+TGG + chr1_3:26970075-26970094 Msa0112340:intron 50.0%
! TGGCCTGGTAGTGTTGTCTT+GGG + chr1_3:26970076-26970095 Msa0112340:intron 50.0%
GATCCCAAGACAACACTACC+AGG - chr1_3:26970082-26970101 None:intergenic 50.0%
GCGAACTTGAGACCTTTACG+AGG - chr1_3:26970117-26970136 None:intergenic 50.0%
TTCGCTCACCGATGCCAATT+TGG + chr1_3:26970132-26970151 Msa0112340:intron 50.0%
TCGCTCACCGATGCCAATTT+GGG + chr1_3:26970133-26970152 Msa0112340:intron 50.0%
TCACCGATGCCAATTTGGGT+GGG + chr1_3:26970137-26970156 Msa0112340:intron 50.0%
TAGCCCACCCAAATTGGCAT+CGG - chr1_3:26970143-26970162 None:intergenic 50.0%
TTGGGCTCGAATTGTTCCAC+GGG - chr1_3:26970321-26970340 None:intergenic 50.0%
CTTGGGCTCGAATTGTTCCA+CGG - chr1_3:26970322-26970341 None:intergenic 50.0%
! CAAATGTTAGCGTTGGACCG+GGG + chr1_3:26970345-26970364 Msa0112340:CDS 50.0%
! AAATGTTAGCGTTGGACCGG+GGG + chr1_3:26970346-26970365 Msa0112340:CDS 50.0%
TTCGAAAGTCGGGGTTTCAC+AGG - chr1_3:26970611-26970630 None:intergenic 50.0%
! CACTATTAGAGCGAGAGTGC+GGG + chr1_3:26970964-26970983 Msa0112340:intron 50.0%
GCATGTAGAGAGAAGACCCT+TGG + chr1_3:26971038-26971057 Msa0112340:intron 50.0%
ATCCTTACGACGGCATCCAA+GGG - chr1_3:26971057-26971076 None:intergenic 50.0%
AATCCTTACGACGGCATCCA+AGG - chr1_3:26971058-26971077 None:intergenic 50.0%
TTTATCCCACTAAGTGGGGC+CGG - chr1_3:26971150-26971169 None:intergenic 50.0%
! GTATCTCTTTTGTCCCAGGC+AGG - chr1_3:26971282-26971301 None:intergenic 50.0%
CGAAGAAAGATGGGCAGGAA+AGG - chr1_3:26972463-26972482 None:intergenic 50.0%
ATTTCCTACTGTGACCTGCG+AGG + chr1_3:26972519-26972538 Msa0112340:intron 50.0%
! GGCCCCATTTTGCAAGGAAA+GGG - chr1_3:26972668-26972687 None:intergenic 50.0%
CTTTCCTTGCAAAATGGGGC+CGG + chr1_3:26972667-26972686 Msa0112340:intron 50.0%
ACTTACCTTTGTCGCCCACT+AGG + chr1_3:26972719-26972738 Msa0112340:intron 50.0%
!! ATGGTGCTGCAAGTGCTATG+TGG - chr1_3:26972751-26972770 None:intergenic 50.0%
GGTACCACAAAGTGAGGGTA+AGG - chr1_3:26972984-26973003 None:intergenic 50.0%
!! AGAAGGGTATTTCTCGCAGG+GGG - chr1_3:26973120-26973139 None:intergenic 50.0%
!! CAGAAGGGTATTTCTCGCAG+GGG - chr1_3:26973121-26973140 None:intergenic 50.0%
GTGTCCACCTGTCAACAGAA+GGG - chr1_3:26973136-26973155 None:intergenic 50.0%
!!! GCTGGCGCTGCAAAGTTTTT+TGG - chr1_3:26973183-26973202 None:intergenic 50.0%
! AAGTGGTAATGTGAGGCTGC+TGG - chr1_3:26973201-26973220 None:intergenic 50.0%
!! TGGGGGGATATGGGTTGATT+AGG - chr1_3:26973282-26973301 None:intergenic 50.0%
! TGGGGTGCCCATTCTCATAA+TGG - chr1_3:26973487-26973506 None:intergenic 50.0%
! AGCTCAAAGGGTGCAAGCAT+GGG - chr1_3:26973506-26973525 None:intergenic 50.0%
TATCTTGGCTGCTGAGGTAG+AGG - chr1_3:26973597-26973616 None:intergenic 50.0%
AGAGTGCGAGACCGATATCT+TGG - chr1_3:26973612-26973631 None:intergenic 50.0%
GGACTCTGTTACAAGTGTGG+AGG - chr1_3:26973707-26973726 None:intergenic 50.0%
ACTAGGCGATCACTGAGAGA+AGG - chr1_3:26973736-26973755 None:intergenic 50.0%
TCTCTCAGTGATCGCCTAGT+AGG + chr1_3:26973736-26973755 Msa0112340:intron 50.0%
TCCGAGTGTATGAATTCGGC+TGG + chr1_3:26973912-26973931 Msa0112340:intron 50.0%
CCCAGCCGAATTCATACACT+CGG - chr1_3:26973916-26973935 None:intergenic 50.0%
CCGAGTGTATGAATTCGGCT+GGG + chr1_3:26973913-26973932 Msa0112340:intron 50.0%
!! TCGGGTTGGGTTTCAACTAC+TGG - chr1_3:26973939-26973958 None:intergenic 50.0%
!! CAATTTGGCTCGGCTATGCA+TGG - chr1_3:26974013-26974032 None:intergenic 50.0%
CATGCATAGCCGAGCCAAAT+TGG + chr1_3:26974011-26974030 Msa0112340:intron 50.0%
CAGAATGATCACCCGTGCAA+AGG - chr1_3:26974076-26974095 None:intergenic 50.0%
TTGCACGGGTGATCATTCTG+TGG + chr1_3:26974076-26974095 Msa0112340:intron 50.0%
TGCACGGGTGATCATTCTGT+GGG + chr1_3:26974077-26974096 Msa0112340:intron 50.0%
CAGTGAGAAATCGGTGGAGA+AGG - chr1_3:26974210-26974229 None:intergenic 50.0%
CGGTAACAGTGAGAAATCGG+TGG - chr1_3:26974216-26974235 None:intergenic 50.0%
TTGGCTGCCATCTACTTGGT+TGG + chr1_3:26974353-26974372 Msa0112340:intron 50.0%
TCCCCTTTGTGAGATCTGAC+AGG + chr1_3:26974423-26974442 Msa0112340:intron 50.0%
CCACCTGTCAGATCTCACAA+AGG - chr1_3:26974429-26974448 None:intergenic 50.0%
CCTTTGTGAGATCTGACAGG+TGG + chr1_3:26974426-26974445 Msa0112340:intron 50.0%
ACGGTCTCTACTAGGCTATG+TGG + chr1_3:26975190-26975209 Msa0112340:intron 50.0%
CAGGAAGTCAGAAACGGTGT+TGG - chr1_3:26975415-26975434 None:intergenic 50.0%
ATGGGTCCCACCAAATCATG+TGG + chr1_3:26975564-26975583 Msa0112340:intron 50.0%
TGGGTCCCACCAAATCATGT+GGG + chr1_3:26975565-26975584 Msa0112340:intron 50.0%
!! TGGGACCCACATGATTTGGT+GGG - chr1_3:26975573-26975592 None:intergenic 50.0%
! ATGGGACCCACATGATTTGG+TGG - chr1_3:26975574-26975593 None:intergenic 50.0%
GTTAGGATCAATGGGTGCTC+TGG + chr1_3:26976010-26976029 Msa0112340:CDS 50.0%
GATAGTAGACGAGGAAGCAG+CGG - chr1_3:26976514-26976533 None:intergenic 50.0%
ACCTTCTCATCCACCCTTGT+TGG + chr1_3:26976558-26976577 Msa0112340:intron 50.0%
ACCAACAAGGGTGGATGAGA+AGG - chr1_3:26976562-26976581 None:intergenic 50.0%
GTCGAGTAAACCAACAAGGG+TGG - chr1_3:26976571-26976590 None:intergenic 50.0%
CGCGAGTCGTTGAAAGGAAT+AGG - chr1_3:26976648-26976667 None:intergenic 50.0%
GCTAAGGGTTAAGGAGTTGG+CGG - chr1_3:26976764-26976783 None:intergenic 50.0%
AGGGGATTGGGTAGTTCAAC+TGG - chr1_3:26976792-26976811 None:intergenic 50.0%
CGGAAAGGCTAACATAGGAG+GGG - chr1_3:26976982-26977001 None:intergenic 50.0%
CTCGGAAAGGCTAACATAGG+AGG - chr1_3:26976984-26977003 None:intergenic 50.0%
CTGCATATTCTCCGATTGGC+AGG - chr1_3:26977229-26977248 None:intergenic 50.0%
CGCATGGGATCTTCCTTCAA+AGG + chr1_3:26977292-26977311 Msa0112340:CDS 50.0%
GAAATGCTAACAGGGGTCCT+TGG + chr1_3:26977438-26977457 Msa0112340:intron 50.0%
AATGCTAACAGGGGTCCTTG+GGG + chr1_3:26977440-26977459 Msa0112340:intron 50.0%
TTTACAGTCTCCTTGGGGTG+TGG + chr1_3:26978453-26978472 Msa0112340:intron 50.0%
!! CAGGTTGGTTATTTGGGTGG+AGG + chr1_3:26978638-26978657 Msa0112340:intron 50.0%
TTGGAGCGTGCTCCTCGTAA+AGG + chr1_3:26970102-26970121 Msa0112340:intron 55.0%
CTCACCGATGCCAATTTGGG+TGG + chr1_3:26970136-26970155 Msa0112340:intron 55.0%
AGGATGTTGCGCTGGATGAG+CGG + chr1_3:26970911-26970930 Msa0112340:intron 55.0%
!! TCATACTGGCTTAGCCTGCC+TGG + chr1_3:26971265-26971284 Msa0112340:intron 55.0%
!! CATACTGGCTTAGCCTGCCT+GGG + chr1_3:26971266-26971285 Msa0112340:intron 55.0%
CTGGAGGAGCTATGCTCTGA+GGG - chr1_3:26972305-26972324 None:intergenic 55.0%
TCTGGAGGAGCTATGCTCTG+AGG - chr1_3:26972306-26972325 None:intergenic 55.0%
CCACACGAAGAAAGATGGGC+AGG - chr1_3:26972468-26972487 None:intergenic 55.0%
CCTGCCCATCTTTCTTCGTG+TGG + chr1_3:26972465-26972484 Msa0112340:intron 55.0%
! CGGCCCCATTTTGCAAGGAA+AGG - chr1_3:26972669-26972688 None:intergenic 55.0%
! TACTCCGGCCCCATTTTGCA+AGG - chr1_3:26972674-26972693 None:intergenic 55.0%
CTATGTGGCCAGCACCTAGT+GGG - chr1_3:26972736-26972755 None:intergenic 55.0%
TGCAAGAGGGTCTCTCGAGT+CGG + chr1_3:26972781-26972800 Msa0112340:intron 55.0%
GGTGTCCACCTGTCAACAGA+AGG - chr1_3:26973137-26973156 None:intergenic 55.0%
ACCAAGTGGGTGGAGCTCAA+GGG - chr1_3:26973230-26973249 None:intergenic 55.0%
!! GGCTATGGGTTGGACTGTGT+AGG - chr1_3:26973418-26973437 None:intergenic 55.0%
!! ATCTCCAAGAGTGTTGGGGG+CGG - chr1_3:26973439-26973458 None:intergenic 55.0%
! GCTCAAAGGGTGCAAGCATG+GGG - chr1_3:26973505-26973524 None:intergenic 55.0%
! GAGCTCAAAGGGTGCAAGCA+TGG - chr1_3:26973507-26973526 None:intergenic 55.0%
TTGGCTGCTGAGGTAGAGGA+AGG - chr1_3:26973593-26973612 None:intergenic 55.0%
GACCGATATCTTGGCTGCTG+AGG - chr1_3:26973603-26973622 None:intergenic 55.0%
!! GGCAGTTTGAGCACTGATGG+CGG + chr1_3:26973669-26973688 Msa0112340:intron 55.0%
!! GCAGTTTGAGCACTGATGGC+GGG + chr1_3:26973670-26973689 Msa0112340:intron 55.0%
! GATCTCAGGAAAGAGCGCAC+AGG - chr1_3:26973790-26973809 None:intergenic 55.0%
GACCCACTTCGATGCTTCTC+CGG + chr1_3:26973823-26973842 Msa0112340:intron 55.0%
ACCCACTTCGATGCTTCTCC+GGG + chr1_3:26973824-26973843 Msa0112340:intron 55.0%
!! ACCCGGAGAAGCATCGAAGT+GGG - chr1_3:26973828-26973847 None:intergenic 55.0%
!! AACCCGGAGAAGCATCGAAG+TGG - chr1_3:26973829-26973848 None:intergenic 55.0%
ACCAATCGCTCCCATGTGTG+TGG + chr1_3:26973872-26973891 Msa0112340:intron 55.0%
! GAGTGAAGGCCATTCGGGTT+GGG - chr1_3:26973952-26973971 None:intergenic 55.0%
TGCTGGGAGTGAAGGCCATT+CGG - chr1_3:26973958-26973977 None:intergenic 55.0%
ATGGCCTTCACTCCCAGCAT+AGG + chr1_3:26973959-26973978 Msa0112340:intron 55.0%
TGGCCTTCACTCCCAGCATA+GGG + chr1_3:26973960-26973979 Msa0112340:intron 55.0%
AGACCCTATGCTGGGAGTGA+AGG - chr1_3:26973966-26973985 None:intergenic 55.0%
!! TTGGCTCGGCTATGCATGGA+GGG - chr1_3:26974009-26974028 None:intergenic 55.0%
!! TTTGGCTCGGCTATGCATGG+AGG - chr1_3:26974010-26974029 None:intergenic 55.0%
GGCAGCCAAAGTATGAGCTC+AGG - chr1_3:26974342-26974361 None:intergenic 55.0%
CGAGGAAGCAGCGGAGAAAA+AGG - chr1_3:26976505-26976524 None:intergenic 55.0%
TCCTTGCCAGGACTTGAACC+TGG + chr1_3:26976737-26976756 Msa0112340:intron 55.0%
TCCAGGTTCAAGTCCTGGCA+AGG - chr1_3:26976741-26976760 None:intergenic 55.0%
CTACCTACAGCCCTGCCAAT+CGG + chr1_3:26977215-26977234 Msa0112340:intron 55.0%
TGAACGGTCTCCCCATTCCT+AGG - chr1_3:26978082-26978101 None:intergenic 55.0%
GTGGCAAGTGGAGCTATTGC+TGG + chr1_3:26978472-26978491 Msa0112340:intron 55.0%
! AGCGTTGGACCGGGGGATTA+TGG + chr1_3:26970353-26970372 Msa0112340:CDS 60.0%
CGGAGATGAGGATGTTGCGC+TGG + chr1_3:26970903-26970922 Msa0112340:intron 60.0%
GACCCTTGGATGCCGTCGTA+AGG + chr1_3:26971052-26971071 Msa0112340:intron 60.0%
ACTAAGTGGGGCCGGCTACA+TGG - chr1_3:26971142-26971161 None:intergenic 60.0%
ATGTAGCCGGCCCCACTTAG+TGG + chr1_3:26971141-26971160 Msa0112340:intron 60.0%
TGTAGCCGGCCCCACTTAGT+GGG + chr1_3:26971142-26971161 Msa0112340:intron 60.0%
ACATGGTTTCTCGGCCTCGC+AGG - chr1_3:26972536-26972555 None:intergenic 60.0%
! CAGCACCTAGTGGGCGACAA+AGG - chr1_3:26972727-26972746 None:intergenic 60.0%
CTTTGTCGCCCACTAGGTGC+TGG + chr1_3:26972725-26972744 Msa0112340:intron 60.0%
GCTATGTGGCCAGCACCTAG+TGG - chr1_3:26972737-26972756 None:intergenic 60.0%
TCCCTTGAGCTCCACCCACT+TGG + chr1_3:26973226-26973245 Msa0112340:intron 60.0%
CACCAAGTGGGTGGAGCTCA+AGG - chr1_3:26973231-26973250 None:intergenic 60.0%
!! AGAGTGTTGGGGGCGGCTAT+GGG - chr1_3:26973432-26973451 None:intergenic 60.0%
!! AAGAGTGTTGGGGGCGGCTA+TGG - chr1_3:26973433-26973452 None:intergenic 60.0%
ATAGCCGCCCCCAACACTCT+TGG + chr1_3:26973432-26973451 Msa0112340:intron 60.0%
!! TTGAGCACTGATGGCGGGAG+TGG + chr1_3:26973675-26973694 Msa0112340:intron 60.0%
!! CACTGATGGCGGGAGTGGTA+GGG + chr1_3:26973680-26973699 Msa0112340:intron 60.0%
!! ACTGATGGCGGGAGTGGTAG+GGG + chr1_3:26973681-26973700 Msa0112340:intron 60.0%
GCCACACACATGGGAGCGAT+TGG - chr1_3:26973876-26973895 None:intergenic 60.0%
ATCGCTCCCATGTGTGTGGC+CGG + chr1_3:26973876-26973895 Msa0112340:intron 60.0%
GGAGTGAAGGCCATTCGGGT+TGG - chr1_3:26973953-26973972 None:intergenic 60.0%
GCTGGGAGTGAAGGCCATTC+GGG - chr1_3:26973957-26973976 None:intergenic 60.0%
GGTGGAGAAGGATTCGCGCA+AGG - chr1_3:26974198-26974217 None:intergenic 60.0%
GGTTAAGGAGTTGGCGGTCC+AGG - chr1_3:26976758-26976777 None:intergenic 60.0%
TCTCCGATTGGCAGGGCTGT+AGG - chr1_3:26977221-26977240 None:intergenic 60.0%
AATTGCGCTCGCAGCTGCTC+AGG + chr1_3:26978113-26978132 Msa0112340:intron 60.0%
TCTCCTTGGGGTGTGGCAAG+TGG + chr1_3:26978460-26978479 Msa0112340:intron 60.0%
TTGGGGTTGAGCTTGGCCCG+TGG + chr1_3:26970302-26970321 Msa0112340:CDS 65.0%
TCGGCCTCGCAGGTCACAGT+AGG - chr1_3:26972526-26972545 None:intergenic 65.0%
TGTTGGGGGCGGCTATGGGT+TGG - chr1_3:26973428-26973447 None:intergenic 65.0%
!! GCACTGATGGCGGGAGTGGT+AGG + chr1_3:26973679-26973698 Msa0112340:intron 65.0%
GGCGGTCCAGGTTCAAGTCC+TGG - chr1_3:26976746-26976765 None:intergenic 65.0%
GCTCCACTTGCCACACCCCA+AGG - chr1_3:26978466-26978485 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 26969530 26979080 26969530 ID=Msa0112340;Name=Msa0112340
chr1_3 mRNA 26969530 26979080 26969530 ID=Msa0112340-mRNA-1;Parent=Msa0112340;Name=Msa0112340-mRNA-1;_AED=0.11;_eAED=0.11;_QI=179|0.71|0.75|1|0.71|0.75|8|374|292
chr1_3 exon 26969530 26969829 26969530 ID=Msa0112340-mRNA-1:exon:9068;Parent=Msa0112340-mRNA-1
chr1_3 exon 26970285 26970444 26970285 ID=Msa0112340-mRNA-1:exon:9069;Parent=Msa0112340-mRNA-1
chr1_3 exon 26971595 26971775 26971595 ID=Msa0112340-mRNA-1:exon:9070;Parent=Msa0112340-mRNA-1
chr1_3 exon 26974933 26974980 26974933 ID=Msa0112340-mRNA-1:exon:9071;Parent=Msa0112340-mRNA-1
chr1_3 exon 26976005 26976101 26976005 ID=Msa0112340-mRNA-1:exon:9072;Parent=Msa0112340-mRNA-1
chr1_3 exon 26977225 26977376 26977225 ID=Msa0112340-mRNA-1:exon:9073;Parent=Msa0112340-mRNA-1
chr1_3 exon 26977711 26977764 26977711 ID=Msa0112340-mRNA-1:exon:9074;Parent=Msa0112340-mRNA-1
chr1_3 exon 26978641 26979080 26978641 ID=Msa0112340-mRNA-1:exon:9075;Parent=Msa0112340-mRNA-1
chr1_3 five_prime_UTR 26969530 26969708 26969530 ID=Msa0112340-mRNA-1:five_prime_utr;Parent=Msa0112340-mRNA-1
chr1_3 CDS 26969709 26969829 26969709 ID=Msa0112340-mRNA-1:cds;Parent=Msa0112340-mRNA-1
chr1_3 CDS 26970285 26970444 26970285 ID=Msa0112340-mRNA-1:cds;Parent=Msa0112340-mRNA-1
chr1_3 CDS 26971595 26971775 26971595 ID=Msa0112340-mRNA-1:cds;Parent=Msa0112340-mRNA-1
chr1_3 CDS 26974933 26974980 26974933 ID=Msa0112340-mRNA-1:cds;Parent=Msa0112340-mRNA-1
chr1_3 CDS 26976005 26976101 26976005 ID=Msa0112340-mRNA-1:cds;Parent=Msa0112340-mRNA-1
chr1_3 CDS 26977225 26977376 26977225 ID=Msa0112340-mRNA-1:cds;Parent=Msa0112340-mRNA-1
chr1_3 CDS 26977711 26977764 26977711 ID=Msa0112340-mRNA-1:cds;Parent=Msa0112340-mRNA-1
chr1_3 CDS 26978641 26978706 26978641 ID=Msa0112340-mRNA-1:cds;Parent=Msa0112340-mRNA-1
chr1_3 three_prime_UTR 26978707 26979080 26978707 ID=Msa0112340-mRNA-1:three_prime_utr;Parent=Msa0112340-mRNA-1
Gene Sequence

>Msa0112340

ATGAAAGGTTTAGGTTCTCATACACCCTTGATTCCAAAGGGAAAACCTCCTCTTTCATTTGCAATATTGAATGCATTACCATCTTGTACTTATTTCTCTGGAAACACCACTTTATCTCCATTAAGATGCAGACAGAAATTGGGGTTGAGCTTGGCCCGTGGAACAATTCGAGCCCAAGCATCAAATGTTAGCGTTGGACCGGGGGATTATGGAAGCAATAATGAGAAAGACAGCCAGAATGTCTCTGACAGAAATTCTGTCGATGACAGTTCATCTAAAATTGTGAAACCTACTCAGATTCCTTATCCCGTCTCTATAGCTTTTGTGCTGTTTGGATGTGCTCTTGTGTTTTCACTAATAGCGTTTGTGAAAGGAGGACCTTCATCAGTTCTTGCAGCAATTGCAAAATCAGGATTCACTGCTGCATTTACATTAATATTTGTTTCTGAAATCGGTGACAAGACATTCTTTATTGCTGCACTCTTGGCAATGCAATATGAGAAGGGATTGGTTTTGTTAGGATCAATGGGTGCTCTGGCGCTCATGTCAATCCTATCTGTTGTAATTGGCCGTATCTTTCAATCAGTGCCTGCTCAGTTCCAAACAACCCTGCCAATCGGAGAATATGCAGCAGTAACTCTTCTTATGTTTTTTGGCCTAAAATCAATAAAAGACGCATGGGATCTTCCTTCAAAGGATGTTAAAAACGGTGATAACAGCAGTCCTGAACTTGATGAACTAGCTGAAGCAGAGGAGCTTGCATCGCAACGGCTTTCAAATCCTCTTGAGATTCTTTGGAAATCGTTCAGTCTTGTTGGTTATTTGGGTGGAGGGCTGTTTCTAATTTTTGCTATAGCCACCTTTTTCGGTGTTTTTTGA

Protein sequence

>Msa0112340

MKGLGSHTPLIPKGKPPLSFAILNALPSCTYFSGNTTLSPLRCRQKLGLSLARGTIRAQASNVSVGPGDYGSNNEKDSQNVSDRNSVDDSSSKIVKPTQIPYPVSIAFVLFGCALVFSLIAFVKGGPSSVLAAIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLVLLGSMGALALMSILSVVIGRIFQSVPAQFQTTLPIGEYAAVTLLMFFGLKSIKDAWDLPSKDVKNGDNSSPELDELAEAEELASQRLSNPLEILWKSFSLVGYLGGGLFLIFAIATFFGVF*