AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0080620

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0080620 MtrunA17_Chr1g0192831 94.190 568 18 4 1 556 1 565 0.0 1054
Msa0080620 MtrunA17_Chr4g0004871 25.462 487 290 16 137 573 32 495 5.29e-21 96.7
Msa0080620 MtrunA17_Chr4g0004881 24.649 499 314 15 119 573 11 491 1.03e-17 86.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0080620 AT5G26820.1 62.653 573 193 8 1 556 7 575 0.0 666
Msa0080620 AT5G03570.2 25.000 476 305 14 137 573 40 502 1.36e-18 89.7
Msa0080620 AT5G03570.1 25.000 476 305 14 137 573 40 502 1.36e-18 89.7
Msa0080620 AT5G03570.4 25.000 460 291 13 150 573 16 457 9.07e-18 86.7
Msa0080620 AT2G38460.3 23.640 478 309 14 137 573 44 506 5.62e-15 78.6
Msa0080620 AT2G38460.8 23.640 478 309 14 137 573 44 506 5.62e-15 78.6
Msa0080620 AT2G38460.7 23.640 478 309 14 137 573 44 506 5.62e-15 78.6
Msa0080620 AT2G38460.4 23.640 478 309 14 137 573 44 506 5.62e-15 78.6
Msa0080620 AT2G38460.1 23.640 478 309 14 137 573 44 506 5.62e-15 78.6
Msa0080620 AT2G38460.6 23.640 478 309 14 137 573 44 506 5.62e-15 78.6

Find 172 sgRNAs with CRISPR-Local

Find 419 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAATTGCTCACTATTATT+TGG 0.097948 1_2:-58906216 Msa0080620:three_prime_UTR
GCAAATGATCCTTCTCATTT+TGG 0.125860 1_2:-58907086 Msa0080620:CDS
GCCTGTAATTCTTCTGTAAA+TGG 0.167514 1_2:-58906427 Msa0080620:three_prime_UTR
CTAATTGTTTCCAACATATT+TGG 0.167752 1_2:+58906506 None:intergenic
GCAGATTACAGGATGAAATT+TGG 0.168385 1_2:+58910005 None:intergenic
TGCTCACTATTATTTGGATT+TGG 0.185828 1_2:-58906210 Msa0080620:three_prime_UTR
CTCATAGATAGATAAGATTT+TGG 0.205931 1_2:-58912245 Msa0080620:five_prime_UTR
AAGCTTTGTGGTGTGGCTTT+GGG 0.232750 1_2:-58910480 Msa0080620:CDS
TCGACTCTGGTCAAGCAATT+TGG 0.241089 1_2:-58908887 Msa0080620:CDS
TATCTATGAGAATAAGATTA+TGG 0.243371 1_2:+58912258 None:intergenic
TCCCTTGGTTGGCAAATTAA+TGG 0.247945 1_2:-58910749 Msa0080620:CDS
TCCATTTACAGAAGAATTAC+AGG 0.265566 1_2:+58906426 None:intergenic
GAAGCTTTGTGGTGTGGCTT+TGG 0.281406 1_2:-58910481 Msa0080620:CDS
GCTCACTATTATTTGGATTT+GGG 0.287332 1_2:-58906209 Msa0080620:three_prime_UTR
CATAATAAATTGAGTTAGTT+AGG 0.289204 1_2:-58906375 Msa0080620:three_prime_UTR
CTAAACCTTAGAAAAGAATA+AGG 0.297815 1_2:+58906304 None:intergenic
TAAAATCAATACTGATATTC+TGG 0.298842 1_2:-58911705 Msa0080620:CDS
AAATCTCAGGCTTCTGTATC+AGG 0.306728 1_2:+58906463 None:intergenic
GCGTCCATGGTTTGTCGTAT+TGG 0.321719 1_2:-58910523 Msa0080620:CDS
CACAGCTGACAGGAGTTAAT+AGG 0.336528 1_2:-58910340 Msa0080620:intron
AACAGAGAACTTACTGTAAC+AGG 0.338783 1_2:+58909946 None:intergenic
CCAGGCTGGGGCAGTTGGGT+TGG 0.341613 1_2:-58908757 Msa0080620:intron
TTAATCGGCACAGGACATTC+AGG 0.342423 1_2:+58911725 None:intergenic
ATCTGCTTAAAAGTTGCTTC+TGG 0.348836 1_2:-58909988 Msa0080620:CDS
TACTGATATACAATTGGAAT+TGG 0.354236 1_2:-58911798 Msa0080620:CDS
GTTTGAATGGAGATATTATA+CGG 0.357729 1_2:+58912290 None:intergenic
AGAAGTTGCTGTTGCAAGTC+TGG 0.361361 1_2:-58907141 Msa0080620:CDS
GGTGGAAAACCAGTTGTTAA+AGG 0.363257 1_2:-58909656 Msa0080620:intron
TAATACCTCTGAGTGATAGA+AGG 0.365637 1_2:+58911929 None:intergenic
GGGTTGCAAATGAGCGTGAC+TGG 0.367569 1_2:-58910458 Msa0080620:CDS
ATGCAGGAACTCTCGGTAAA+TGG 0.371611 1_2:+58910725 None:intergenic
CTCTTGCCAGTTGCTGTGGT+GGG 0.374283 1_2:-58910805 Msa0080620:CDS
ATTATTTGGATTTGGGTAAA+GGG 0.374717 1_2:-58906202 Msa0080620:three_prime_UTR
TTTGTCGTATTGGTTTCAGC+TGG 0.397742 1_2:-58910513 Msa0080620:CDS
ACAAGAAACGAGGACAACTA+TGG 0.398430 1_2:-58912065 Msa0080620:exon
CAACAGGTCTGTGATGGTTT+AGG 0.400556 1_2:+58909792 None:intergenic
TATTATTTGGATTTGGGTAA+AGG 0.401328 1_2:-58906203 Msa0080620:three_prime_UTR
GGGGCGCAGATTATCCAAAC+TGG 0.401903 1_2:-58907200 Msa0080620:CDS
TGAGTTGGACGAAACCTAAC+TGG 0.405581 1_2:-58912119 Msa0080620:five_prime_UTR
TGTGCACTAATATAATATAA+AGG 0.405676 1_2:+58906396 None:intergenic
AACGAATACTGATATACAAT+TGG 0.407578 1_2:-58911804 Msa0080620:CDS
AAGAAACCCACCACAGCAAC+TGG 0.408080 1_2:+58910799 None:intergenic
CTACATTGCTTCTGCGTCCA+TGG 0.410181 1_2:-58910536 Msa0080620:CDS
AGAATTGTGGTGATTCTGAT+AGG 0.410753 1_2:-58906261 Msa0080620:three_prime_UTR
ATCTATGAGAATAAGATTAT+GGG 0.412735 1_2:+58912259 None:intergenic
TGGATGATGGGATCCCAGTT+TGG 0.424363 1_2:+58907186 None:intergenic
GCTACTCCGGCACACCCTGC+CGG 0.426301 1_2:-58911502 Msa0080620:CDS
ATAGCTGGAGCATTGCTGTT+TGG 0.430015 1_2:-58910039 Msa0080620:CDS
AGTATTCGTTATCGAACATC+TGG 0.430787 1_2:+58911817 None:intergenic
ACTAAAGTGGCTATAATTGT+TGG 0.430851 1_2:-58910775 Msa0080620:CDS
ATGAGATTTGCTTTGGATGA+TGG 0.434327 1_2:+58907173 None:intergenic
AACATTCGTCTCTTCGACTC+TGG 0.436041 1_2:-58908900 Msa0080620:CDS
AGTTGCTTCTGGCTTAATGA+TGG 0.436477 1_2:-58909977 Msa0080620:CDS
CAGGATGAAATTTGGAAAGA+AGG 0.437395 1_2:+58910013 None:intergenic
CTTCAAGCTGTGGAACTTGA+AGG 0.439189 1_2:+58912092 None:intergenic
TTTGCTTGTGCAAGTGCGAC+TGG 0.446486 1_2:+58910317 None:intergenic
TGATAGAAGGGTAGTAATTG+AGG 0.448102 1_2:+58911942 None:intergenic
TATAATTGTTGGTGGTCCCT+TGG 0.449655 1_2:-58910764 Msa0080620:CDS
CCTCTTGCCAGTTGCTGTGG+TGG 0.452842 1_2:-58910806 Msa0080620:CDS
AGTCCCGATGAGATTTGCTT+TGG 0.459197 1_2:+58907166 None:intergenic
TTGTCGTATTGGTTTCAGCT+GGG 0.460813 1_2:-58910512 Msa0080620:CDS
AAAACCAGTTGTTAAAGGTC+TGG 0.461135 1_2:-58909651 Msa0080620:intron
TTCATCGAATGATCTGCAAC+AGG 0.461827 1_2:+58909776 None:intergenic
ATTAAAGTTTCACTCAAGAA+AGG 0.464442 1_2:-58912360 None:intergenic
GGCTTACATCCATCCATCAT+TGG 0.464689 1_2:-58908962 Msa0080620:CDS
AAGAAGGAGGAATGGTGAAA+TGG 0.466110 1_2:+58912014 None:intergenic
AGCTTTGTGGTGTGGCTTTG+GGG 0.469755 1_2:-58910479 Msa0080620:CDS
GCATCAGATGCTGACAGTAT+AGG 0.471700 1_2:-58909747 Msa0080620:intron
GGGGCTATTGAGAAGCTTTG+TGG 0.472566 1_2:-58910492 Msa0080620:CDS
CATATATATGTACATATGTA+TGG 0.480982 1_2:-58906069 Msa0080620:intron
TTTCTACCGGCGTTCTTGAC+CGG 0.483139 1_2:-58909815 Msa0080620:CDS
TATAACCCGGCAGGGTGTGC+CGG 0.490319 1_2:+58911496 None:intergenic
ATGGGAATGTAATGTTTGAA+TGG 0.490945 1_2:+58912277 None:intergenic
AACTTGAAGGAAAACCAGTT+AGG 0.492169 1_2:+58912105 None:intergenic
TGAGATTTGCTTTGGATGAT+GGG 0.493099 1_2:+58907174 None:intergenic
CTACTCCGGCACACCCTGCC+GGG 0.493191 1_2:-58911501 Msa0080620:intron
CACATGTCATATGATGTTGT+AGG 0.494676 1_2:-58907221 Msa0080620:CDS
TCCGCTAAATCCTCCAATGA+TGG 0.499930 1_2:+58908949 None:intergenic
GGTTTATTTCCACAGCTGAC+AGG 0.500274 1_2:-58910350 Msa0080620:intron
ATTGAGTTAGTTAGGTGTCT+AGG 0.503347 1_2:-58906367 Msa0080620:three_prime_UTR
TGGAAGCTATCAAGCTCGGC+TGG 0.508035 1_2:-58909631 Msa0080620:CDS
ACATGTCATATGATGTTGTA+GGG 0.508610 1_2:-58907220 Msa0080620:CDS
CATCCAAAGCAAATCTCATC+GGG 0.512204 1_2:-58907169 Msa0080620:CDS
AACGAGTATAAGAGTGAAGG+AGG 0.512745 1_2:-58911767 Msa0080620:CDS
TCCATCATTGGAGGATTTAG+CGG 0.517695 1_2:-58908950 Msa0080620:CDS
ATTGTTGGTGGTCCCTTGGT+TGG 0.518606 1_2:-58910760 Msa0080620:CDS
GCAATACTAGCAGGAAGGAC+TGG 0.519217 1_2:+58909590 None:intergenic
ATCCCACCATATAACCCGGC+AGG 0.521627 1_2:+58911487 None:intergenic
GGTGGGTTTCTTCACTAAAG+TGG 0.522472 1_2:-58910788 Msa0080620:CDS
TCAAGCTTTATTTCTCAGCA+TGG 0.524182 1_2:-58908730 Msa0080620:CDS
TGCCTTGTTGCAAAGACTGT+TGG 0.526398 1_2:-58906542 Msa0080620:CDS
AAGCCTCTTGCCAGTTGCTG+TGG 0.527013 1_2:-58910809 Msa0080620:CDS
TCCTTCCTGCTAGTATTGCG+TGG 0.529013 1_2:-58909586 Msa0080620:CDS
TATTGAGAAGCTTTGTGGTG+TGG 0.529833 1_2:-58910487 Msa0080620:CDS
AGTATAAGAGTGAAGGAGGA+GGG 0.530270 1_2:-58911763 Msa0080620:CDS
TAGTTATATGCAGGAACTCT+CGG 0.530737 1_2:+58910718 None:intergenic
TGGACAAGAACCAAATATGT+TGG 0.532916 1_2:-58906516 Msa0080620:CDS
TTACAATCAGAAACAAGAAA+AGG 0.537721 1_2:+58908658 None:intergenic
AACGCCGGTAGAAAGCTTGT+TGG 0.538024 1_2:+58909824 None:intergenic
ACAGTTAAGTAGTTATATGC+AGG 0.538293 1_2:+58910709 None:intergenic
GGTTGATGCGAGAAAGAAGG+AGG 0.539493 1_2:+58912001 None:intergenic
GTTGCTTCTGGCTTAATGAT+GGG 0.540232 1_2:-58909976 Msa0080620:CDS
ATGCGAGAAAGAAGGAGGAA+TGG 0.541534 1_2:+58912006 None:intergenic
TCCATTAATTTGCCAACCAA+GGG 0.542107 1_2:+58910748 None:intergenic
AATGTTGTCTCTTCTATCAG+TGG 0.542189 1_2:-58907054 Msa0080620:CDS
TGAGCGTGACTGGGTTGTGC+TGG 0.542195 1_2:-58910448 Msa0080620:intron
TTAACCAACAAGCTTTCTAC+CGG 0.542347 1_2:-58909828 Msa0080620:CDS
GTCCATTAATTTGCCAACCA+AGG 0.544175 1_2:+58910747 None:intergenic
GAAGGTTGATGCGAGAAAGA+AGG 0.545398 1_2:+58911998 None:intergenic
GAGTATAAGAGTGAAGGAGG+AGG 0.547656 1_2:-58911764 Msa0080620:CDS
TGAACATTACTCAAAACAAA+GGG 0.547754 1_2:-58912172 Msa0080620:five_prime_UTR
TTGTCTCTTCTATCAGTGGT+TGG 0.547810 1_2:-58907050 Msa0080620:CDS
TCTTGTGAAACTTCAAGCTG+TGG 0.549218 1_2:+58912082 None:intergenic
TTCAATATTGTTCTTACACC+AGG 0.554964 1_2:-58909551 Msa0080620:CDS
AGCACCCACGCAATACTAGC+AGG 0.557563 1_2:+58909581 None:intergenic
CTAAATCCTCCAATGATGGA+TGG 0.558803 1_2:+58908953 None:intergenic
GTTGCAAAGACTGTTGGATG+TGG 0.559280 1_2:-58906536 Msa0080620:CDS
CAAGAGGCTTGAATGAATCA+AGG 0.559351 1_2:+58910822 None:intergenic
CTTTACAAAACGTTTATGCA+TGG 0.559652 1_2:+58906340 None:intergenic
CTTTGCAACAAGGCAGCTAG+TGG 0.560103 1_2:+58906550 None:intergenic
CTCGGCTGGAAAGAGTATCT+AGG 0.560347 1_2:-58909617 Msa0080620:CDS
GCTTTGTGGTGTGGCTTTGG+GGG 0.562182 1_2:-58910478 Msa0080620:CDS
CTGGCAGAGTCTCTAATGCT+TGG 0.562890 1_2:-58907122 Msa0080620:CDS
CCTTCCTGCTAGTATTGCGT+GGG 0.565115 1_2:-58909585 Msa0080620:CDS
GAATTGTGGTGATTCTGATA+GGG 0.567305 1_2:-58906260 Msa0080620:three_prime_UTR
AGAAACAAGAAAAGGAGAAG+AGG 0.569930 1_2:+58908666 None:intergenic
ATTACTCAAAACAAAGGGAA+AGG 0.570265 1_2:-58912167 Msa0080620:five_prime_UTR
TGAATCAAGGCAATGGCAGA+AGG 0.572956 1_2:+58910835 None:intergenic
TATCAGTGGTTGGTGCAGCA+TGG 0.573779 1_2:-58907040 Msa0080620:CDS
TCATCCAAAGCAAATCTCAT+CGG 0.577100 1_2:-58907170 Msa0080620:CDS
GAAATGGATGAGATTAAAAG+TGG 0.579566 1_2:+58912030 None:intergenic
CGATAGCGTAATCTCGAAGA+AGG 0.580595 1_2:+58911980 None:intergenic
AATGCTGTCATCAAACTGCC+TGG 0.581730 1_2:+58909533 None:intergenic
ATGAACATTACTCAAAACAA+AGG 0.582795 1_2:-58912173 Msa0080620:five_prime_UTR
GGTTGCAAATGAGCGTGACT+GGG 0.583770 1_2:-58910457 Msa0080620:CDS
TGTCGTATTGGTTTCAGCTG+GGG 0.584794 1_2:-58910511 Msa0080620:CDS
GGTCTGGAAGCTATCAAGCT+CGG 0.585597 1_2:-58909635 Msa0080620:CDS
AATACCTCTGAGTGATAGAA+GGG 0.586952 1_2:+58911930 None:intergenic
GCTAAACATCCAAAATGAGA+AGG 0.588441 1_2:+58907077 None:intergenic
TATGTTGGAAACAATTAGCA+TGG 0.589071 1_2:-58906501 Msa0080620:CDS
GCATGCTCTTGCAGCTACTC+CGG 0.591566 1_2:-58911515 Msa0080620:CDS
AAAGTGGCTATAATTGTTGG+TGG 0.593039 1_2:-58910772 Msa0080620:CDS
AATCAATACTGATATTCTGG+TGG 0.598210 1_2:-58911702 Msa0080620:CDS
GAAACCAATACGACAAACCA+TGG 0.610451 1_2:+58910519 None:intergenic
ATCCAACAGTCTTTGCAACA+AGG 0.610593 1_2:+58906540 None:intergenic
AGGTCTGTGATGGTTTAGGC+CGG 0.616368 1_2:+58909796 None:intergenic
TCTCAGGCTTCTGTATCAGG+TGG 0.616834 1_2:+58906466 None:intergenic
GCTTGAATGAATCAAGGCAA+TGG 0.619193 1_2:+58910828 None:intergenic
TTACATCCATCCATCATTGG+AGG 0.619549 1_2:-58908959 Msa0080620:CDS
TCGAATTGATCTGTTATCTG+AGG 0.619996 1_2:-58910282 Msa0080620:intron
CCACCACAGCAACTGGCAAG+AGG 0.629861 1_2:+58910806 None:intergenic
ACAGACTTGCTGCAGAATTG+TGG 0.630841 1_2:-58906274 Msa0080620:three_prime_UTR
GTAAACGAGTATAAGAGTGA+AGG 0.633018 1_2:-58911770 Msa0080620:CDS
AGCAATGTAGACACTGAAGT+AGG 0.635319 1_2:+58910549 None:intergenic
GGGCGCAGATTATCCAAACT+GGG 0.637766 1_2:-58907199 Msa0080620:CDS
CCCACGCAATACTAGCAGGA+AGG 0.637832 1_2:+58909585 None:intergenic
TCCCACCATATAACCCGGCA+GGG 0.640815 1_2:+58911488 None:intergenic
GATCTGCAACAGGTCTGTGA+TGG 0.642563 1_2:+58909786 None:intergenic
GCTGTTGCTGTATATATGAG+TGG 0.644425 1_2:-58908708 Msa0080620:CDS
AATGTAGACACTGAAGTAGG+AGG 0.659268 1_2:+58910552 None:intergenic
TTTAGGCCGGTCAAGAACGC+CGG 0.663850 1_2:+58909809 None:intergenic
AAATGGATGAGATTAAAAGT+GGG 0.663962 1_2:+58912031 None:intergenic
TACATATGTATGGTAAGTTG+TGG 0.664551 1_2:-58906059 Msa0080620:three_prime_UTR
CATGTCATATGATGTTGTAG+GGG 0.666869 1_2:-58907219 Msa0080620:CDS
AGACACTGAAGTAGGAGGCA+CGG 0.667896 1_2:+58910557 None:intergenic
TGTCAAGACAGTATCTACAA+AGG 0.690460 1_2:+58911646 None:intergenic
CAAGACAGTATCTACAAAGG+CGG 0.696073 1_2:+58911649 None:intergenic
AGCTGCTGATAATAACTGAG+TGG 0.700226 1_2:+58910599 None:intergenic
TTGAAGTTTCACAAGAAACG+AGG 0.711096 1_2:-58912075 Msa0080620:five_prime_UTR
ACTACCCTTCTATCACTCAG+AGG 0.724845 1_2:-58911934 Msa0080620:intron
GTTGGAAACAATTAGCATGG+TGG 0.727823 1_2:-58906498 Msa0080620:CDS
TGAATGGAGATATTATACGG+CGG 0.760274 1_2:+58912293 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATAGAATCAATTAAT+GGG + chr1_2:58909227-58909246 None:intergenic 10.0%
!! AATAATATAGAATCAATTAA+TGG + chr1_2:58909228-58909247 None:intergenic 10.0%
!!! ATATCAGTATTGATTTTAAT+CGG + chr1_2:58906632-58906651 None:intergenic 15.0%
!!! AAAATAGAATGATTGATTTT+AGG + chr1_2:58907713-58907732 None:intergenic 15.0%
!! TAATTATTTATGATTCTTAG+TGG - chr1_2:58907968-58907987 Msa0080620:intron 15.0%
!! TAATATAGAATCAATTAATG+GGG + chr1_2:58909226-58909245 None:intergenic 15.0%
!!! TTTATTTTCCTTGTTTTATT+TGG - chr1_2:58909288-58909307 Msa0080620:intron 15.0%
!!! TTATTTTCCTTGTTTTATTT+GGG - chr1_2:58909289-58909308 Msa0080620:intron 15.0%
!!! TTTTTCAAAGGAAAAATAAT+TGG + chr1_2:58909906-58909925 None:intergenic 15.0%
!! TTTATTCAAACAATGATTAA+AGG + chr1_2:58910048-58910067 None:intergenic 15.0%
!! TTGAAAATAAAGAATTTACA+AGG + chr1_2:58910786-58910805 None:intergenic 15.0%
!!! AATATTTGTTAAACAAGTAA+AGG - chr1_2:58910929-58910948 Msa0080620:intron 15.0%
!! AATGAATAAATAATGCAATT+TGG + chr1_2:58910984-58911003 None:intergenic 15.0%
!! ATCTATGAGAATAAGATTAT+GGG + chr1_2:58906083-58906102 None:intergenic 20.0%
!! TATCTATGAGAATAAGATTA+TGG + chr1_2:58906084-58906103 None:intergenic 20.0%
!! TAAAATCAATACTGATATTC+TGG - chr1_2:58906634-58906653 Msa0080620:intron 20.0%
!!! TTTAAAATTGTGTCTTTCTT+CGG - chr1_2:58907011-58907030 Msa0080620:intron 20.0%
!!! AAATCAATCATTCTATTTTC+AGG - chr1_2:58907714-58907733 Msa0080620:intron 20.0%
!!! TAAAAGTATGCTAATTAACT+TGG + chr1_2:58908094-58908113 None:intergenic 20.0%
!! TTCATGAGACAATAATAAAT+TGG + chr1_2:58908128-58908147 None:intergenic 20.0%
!! TTCATGAGACAATAATAAAT+TGG + chr1_2:58908128-58908147 None:intergenic 20.0%
!! ATAAGTAAGAAACGAAAAAA+GGG + chr1_2:58909011-58909030 None:intergenic 20.0%
!! AATAAGTAAGAAACGAAAAA+AGG + chr1_2:58909012-58909031 None:intergenic 20.0%
!! CTTAGATAACAAATATCAAA+GGG + chr1_2:58909727-58909746 None:intergenic 20.0%
!! TCTTAGATAACAAATATCAA+AGG + chr1_2:58909728-58909747 None:intergenic 20.0%
!! AAAAATAAAAGTGATCCAAA+AGG - chr1_2:58910065-58910084 Msa0080620:intron 20.0%
!! AAAATAAAAGTGATCCAAAA+GGG - chr1_2:58910066-58910085 Msa0080620:intron 20.0%
!! ATTTCAAGGACAAAATTTAT+AGG + chr1_2:58910119-58910138 None:intergenic 20.0%
!!! TGTATTTTCTCTATATTTCA+AGG + chr1_2:58910133-58910152 None:intergenic 20.0%
!! ATAGAGAAAATACAATGTTA+TGG - chr1_2:58910139-58910158 Msa0080620:intron 20.0%
!! TAGAGAAAATACAATGTTAT+GGG - chr1_2:58910140-58910159 Msa0080620:intron 20.0%
!! TAACATTGCAAATTGTTTAT+AGG - chr1_2:58910436-58910455 Msa0080620:intron 20.0%
!! AACATTGCAAATTGTTTATA+GGG - chr1_2:58910437-58910456 Msa0080620:intron 20.0%
!! TTCAAACAATCTTACAAAAA+AGG + chr1_2:58910613-58910632 None:intergenic 20.0%
!! ATTTAGGTCACTAATTTATT+TGG + chr1_2:58910716-58910735 None:intergenic 20.0%
!! AAATAAATTAGTGACCTAAA+TGG - chr1_2:58910715-58910734 Msa0080620:CDS 20.0%
!!! CATTTTTTGAAATACAAACT+TGG - chr1_2:58911000-58911019 Msa0080620:intron 20.0%
!! TTACATAAATATCAAAACTG+AGG + chr1_2:58911385-58911404 None:intergenic 20.0%
!!! CTATCAATACTTTTATACAA+CGG + chr1_2:58911529-58911548 None:intergenic 20.0%
!! TGTGCACTAATATAATATAA+AGG + chr1_2:58911946-58911965 None:intergenic 20.0%
!! CATAATAAATTGAGTTAGTT+AGG - chr1_2:58911964-58911983 Msa0080620:CDS 20.0%
!!! TACTGTTTTGATGAAAAAAT+TGG - chr1_2:58912196-58912215 Msa0080620:five_prime_UTR 20.0%
!! CATATATATGTACATATGTA+TGG - chr1_2:58912270-58912289 Msa0080620:five_prime_UTR 20.0%
! GTTTGAATGGAGATATTATA+CGG + chr1_2:58906052-58906071 None:intergenic 25.0%
!! CTCATAGATAGATAAGATTT+TGG - chr1_2:58906094-58906113 Msa0080620:intron 25.0%
! ATGAACATTACTCAAAACAA+AGG - chr1_2:58906166-58906185 Msa0080620:three_prime_UTR 25.0%
! TGAACATTACTCAAAACAAA+GGG - chr1_2:58906167-58906186 Msa0080620:three_prime_UTR 25.0%
! AAATGGATGAGATTAAAAGT+GGG + chr1_2:58906311-58906330 None:intergenic 25.0%
! AACGAATACTGATATACAAT+TGG - chr1_2:58906535-58906554 Msa0080620:CDS 25.0%
! TACTGATATACAATTGGAAT+TGG - chr1_2:58906541-58906560 Msa0080620:CDS 25.0%
!! CATTGTTTCTTATCTTTGTT+TGG - chr1_2:58906769-58906788 Msa0080620:intron 25.0%
! CTAAGACAACATATATACTA+TGG + chr1_2:58906908-58906927 None:intergenic 25.0%
! TTACATTCCACAAGTAAATA+GGG + chr1_2:58907085-58907104 None:intergenic 25.0%
! TTTACATTCCACAAGTAAAT+AGG + chr1_2:58907086-58907105 None:intergenic 25.0%
!! ATATCCTGCTTGATTTTATA+AGG + chr1_2:58907680-58907699 None:intergenic 25.0%
! AATAACAAACTACATGTCAA+GGG + chr1_2:58907943-58907962 None:intergenic 25.0%
! AAATAACAAACTACATGTCA+AGG + chr1_2:58907944-58907963 None:intergenic 25.0%
!! TAGCATACTTTTATACTTCT+CGG - chr1_2:58908101-58908120 Msa0080620:intron 25.0%
! TATTGTCTCATGAAATATTC+AGG - chr1_2:58908134-58908153 Msa0080620:intron 25.0%
! TATTGTCTCATGAAATATTC+AGG - chr1_2:58908134-58908153 Msa0080620:intron 25.0%
!!! ATTTTTCAATTTCAGATAGC+TGG - chr1_2:58908285-58908304 Msa0080620:intron 25.0%
! GTATGTGAAAATTTCCTAAA+TGG - chr1_2:58908843-58908862 Msa0080620:intron 25.0%
! TTTCCAAATATTGTTAGTTG+AGG - chr1_2:58909067-58909086 Msa0080620:intron 25.0%
! TAACCTAAAAAACTAATCCT+CGG + chr1_2:58909316-58909335 None:intergenic 25.0%
!! TTGAAAATATTCTCTTTTCC+AGG - chr1_2:58909564-58909583 Msa0080620:CDS 25.0%
! TTACAATCAGAAACAAGAAA+AGG + chr1_2:58909684-58909703 None:intergenic 25.0%
! TGATTGTAAGTCACTAAAAA+AGG - chr1_2:58909695-58909714 Msa0080620:intron 25.0%
!!! CACTGATATTTTTGCAATTT+TGG + chr1_2:58909820-58909839 None:intergenic 25.0%
! TTCAAAGGAAAAATAATTGG+AGG + chr1_2:58909903-58909922 None:intergenic 25.0%
!!! ATTTGTCATCGATTTTTCAA+AGG + chr1_2:58909918-58909937 None:intergenic 25.0%
! AAATAAAAGTGATCCAAAAG+GGG - chr1_2:58910067-58910086 Msa0080620:intron 25.0%
! AATGTGCAGTATATATTTGA+TGG - chr1_2:58910197-58910216 Msa0080620:intron 25.0%
!!! AAAAGCATAGCTTTTAACTT+TGG + chr1_2:58910265-58910284 None:intergenic 25.0%
!!! AGCTATGCTTTTTATACTAT+AGG - chr1_2:58910273-58910292 Msa0080620:intron 25.0%
!!! GCTATGCTTTTTATACTATA+GGG - chr1_2:58910274-58910293 Msa0080620:intron 25.0%
! ACATTGCAAATTGTTTATAG+GGG - chr1_2:58910438-58910457 Msa0080620:intron 25.0%
!!! TTATAGGGGATATTTTGATA+TGG - chr1_2:58910452-58910471 Msa0080620:CDS 25.0%
! TATACAATAACCATATCAGT+AGG + chr1_2:58910535-58910554 None:intergenic 25.0%
!!! AGCTTCATTGTTTTTATAAC+TGG - chr1_2:58910865-58910884 Msa0080620:CDS 25.0%
! TTTGTATGAGAGAAAAGATT+TGG - chr1_2:58910953-58910972 Msa0080620:intron 25.0%
!! AATACAAACTTGGATTTTGA+TGG - chr1_2:58911010-58911029 Msa0080620:intron 25.0%
! GAAAAATATGGTAGTAAACA+AGG + chr1_2:58911429-58911448 None:intergenic 25.0%
! AGACATGTCATAGAAAAATA+TGG + chr1_2:58911441-58911460 None:intergenic 25.0%
!! TGTTATATTTTTCCTTTCTC+CGG - chr1_2:58911586-58911605 Msa0080620:intron 25.0%
! CAATGGAACAATAAAATTTC+CGG + chr1_2:58911608-58911627 None:intergenic 25.0%
! CTAATTGTTTCCAACATATT+TGG + chr1_2:58911836-58911855 None:intergenic 25.0%
!! GTTTTCCTTATTCTTTTCTA+AGG - chr1_2:58912030-58912049 Msa0080620:CDS 25.0%
! CTAAACCTTAGAAAAGAATA+AGG + chr1_2:58912038-58912057 None:intergenic 25.0%
! TATTATTTGGATTTGGGTAA+AGG - chr1_2:58912136-58912155 Msa0080620:five_prime_UTR 25.0%
! ATTATTTGGATTTGGGTAAA+GGG - chr1_2:58912137-58912156 Msa0080620:five_prime_UTR 25.0%
!! ATTACTTCATTTTGAGCAAA+TGG - chr1_2:58912163-58912182 Msa0080620:five_prime_UTR 25.0%
!!! GTTTTGATGAAAAAATTGGT+AGG - chr1_2:58912200-58912219 Msa0080620:five_prime_UTR 25.0%
!! ATTTCGTGTTTTTGTTTGTG+TGG + chr1_2:58906018-58906037 None:intergenic 30.0%
ATGGGAATGTAATGTTTGAA+TGG + chr1_2:58906065-58906084 None:intergenic 30.0%
ATTACTCAAAACAAAGGGAA+AGG - chr1_2:58906172-58906191 Msa0080620:three_prime_UTR 30.0%
GAAATGGATGAGATTAAAAG+TGG + chr1_2:58906312-58906331 None:intergenic 30.0%
AATCAATACTGATATTCTGG+TGG - chr1_2:58906637-58906656 Msa0080620:intron 30.0%
!!! GGTTGTTTTTTCATAGGTTT+AGG - chr1_2:58906728-58906747 Msa0080620:intron 30.0%
TACATTCCACAAGTAAATAG+GGG + chr1_2:58907084-58907103 None:intergenic 30.0%
TATGTATAGAGCAATGGATA+CGG + chr1_2:58907119-58907138 None:intergenic 30.0%
TATCCATTGCTCTATACATA+TGG - chr1_2:58907119-58907138 Msa0080620:CDS 30.0%
ATTCCATATGTATAGAGCAA+TGG + chr1_2:58907125-58907144 None:intergenic 30.0%
AAATGCTGAAAATCTTACGT+TGG - chr1_2:58907187-58907206 Msa0080620:CDS 30.0%
AAGTGCTTTCATTTGTTTGA+TGG - chr1_2:58907238-58907257 Msa0080620:CDS 30.0%
AGTGCTTTCATTTGTTTGAT+GGG - chr1_2:58907239-58907258 Msa0080620:CDS 30.0%
CGTAATAAGGTGATATCAAA+CGG + chr1_2:58907342-58907361 None:intergenic 30.0%
CAAACATCAATAAGTGTACA+AGG + chr1_2:58907374-58907393 None:intergenic 30.0%
TACACTTATTGATGTTTGTG+TGG - chr1_2:58907376-58907395 Msa0080620:intron 30.0%
! TTGCATTGTTGCAAATTTTG+TGG - chr1_2:58907458-58907477 Msa0080620:intron 30.0%
ACTAAAGTGGCTATAATTGT+TGG - chr1_2:58907564-58907583 Msa0080620:intron 30.0%
ACAGTTAAGTAGTTATATGC+AGG + chr1_2:58907633-58907652 None:intergenic 30.0%
TAACTACTTAACTGTCATTC+AGG - chr1_2:58907638-58907657 Msa0080620:intron 30.0%
ATTTGTGAGTTTCAAAGTCA+GGG + chr1_2:58908267-58908286 None:intergenic 30.0%
AATTTGTGAGTTTCAAAGTC+AGG + chr1_2:58908268-58908287 None:intergenic 30.0%
TGAATTTATCTTCTGACTGA+AGG + chr1_2:58908443-58908462 None:intergenic 30.0%
AGTATATGCTTACATCTATC+TGG - chr1_2:58908662-58908681 Msa0080620:CDS 30.0%
TTCAATATTGTTCTTACACC+AGG - chr1_2:58908788-58908807 Msa0080620:intron 30.0%
TAAAGATTATGCTGACAATG+AGG - chr1_2:58908914-58908933 Msa0080620:CDS 30.0%
AAAGATTATGCTGACAATGA+GGG - chr1_2:58908915-58908934 Msa0080620:CDS 30.0%
AAAATCATAACTTCACTCCA+AGG + chr1_2:58909097-58909116 None:intergenic 30.0%
TAACTGTTTGGTATAGCATT+CGG + chr1_2:58909137-58909156 None:intergenic 30.0%
ACCAAACAGTTAAAAAGAGA+AGG - chr1_2:58909145-58909164 Msa0080620:intron 30.0%
CCAAACAGTTAAAAAGAGAA+GGG - chr1_2:58909146-58909165 Msa0080620:intron 30.0%
AGTTAAAAAGAGAAGGGAAA+AGG - chr1_2:58909152-58909171 Msa0080620:intron 30.0%
GTTAAAAAGAGAAGGGAAAA+GGG - chr1_2:58909153-58909172 Msa0080620:intron 30.0%
! CAAGCAATTTGGCATTTTAA+AGG - chr1_2:58909463-58909482 Msa0080620:intron 30.0%
GAATATAATTACAACAGCCT+TGG - chr1_2:58909746-58909765 Msa0080620:intron 30.0%
!! TACTAGTGGATTGAAATGAT+AGG - chr1_2:58909773-58909792 Msa0080620:CDS 30.0%
ATACTCCTAGATCATATCTA+GGG - chr1_2:58909872-58909891 Msa0080620:intron 30.0%
AAATACAATGTTATGGGACA+AGG - chr1_2:58910146-58910165 Msa0080620:intron 30.0%
!! TATATATTTGATGGTGGTGT+TGG - chr1_2:58910206-58910225 Msa0080620:intron 30.0%
ACTTCTTTCAAGCTTCAAAT+AGG - chr1_2:58910364-58910383 Msa0080620:intron 30.0%
TTCCTTTGACATTCAAACAT+GGG - chr1_2:58910398-58910417 Msa0080620:intron 30.0%
!!! GGATATTTTGATATGGACAA+AGG - chr1_2:58910459-58910478 Msa0080620:CDS 30.0%
GACAATCACTATTTACAGAA+AGG + chr1_2:58910511-58910530 None:intergenic 30.0%
ACACGTGATATTTGTAAAGA+GGG + chr1_2:58910576-58910595 None:intergenic 30.0%
AACACGTGATATTTGTAAAG+AGG + chr1_2:58910577-58910596 None:intergenic 30.0%
AAGATTGTTTGAACGTATCT+AGG - chr1_2:58910620-58910639 Msa0080620:intron 30.0%
AACAATCCATATCACCATTT+AGG + chr1_2:58910732-58910751 None:intergenic 30.0%
! ATTTGTTAGCAAACTAGACT+TGG - chr1_2:58910817-58910836 Msa0080620:CDS 30.0%
!! AAACTAGACTTGGTTTGTAT+TGG - chr1_2:58910827-58910846 Msa0080620:CDS 30.0%
!! AACTAGACTTGGTTTGTATT+GGG - chr1_2:58910828-58910847 Msa0080620:CDS 30.0%
! TGTATTGGGTGAAAATTTTG+TGG - chr1_2:58910842-58910861 Msa0080620:CDS 30.0%
CTACTGAAAAAAGTTTCAAC+AGG - chr1_2:58910894-58910913 Msa0080620:intron 30.0%
ACATGTCATATGATGTTGTA+GGG - chr1_2:58911119-58911138 Msa0080620:intron 30.0%
ACACACAAATATCAAAGTTG+AGG + chr1_2:58911504-58911523 None:intergenic 30.0%
ACAATAAAATTTCCGGAGAA+AGG + chr1_2:58911601-58911620 None:intergenic 30.0%
! CGGAAATTTTATTGTTCCAT+TGG - chr1_2:58911606-58911625 Msa0080620:intron 30.0%
ACAATTAGAAATCCATAGAC+TGG + chr1_2:58911707-58911726 None:intergenic 30.0%
TATGTTGGAAACAATTAGCA+TGG - chr1_2:58911838-58911857 Msa0080620:intron 30.0%
AAAGCCATAGAAAAAATCTC+AGG + chr1_2:58911892-58911911 None:intergenic 30.0%
TCCATTTACAGAAGAATTAC+AGG + chr1_2:58911916-58911935 None:intergenic 30.0%
CTTTACAAAACGTTTATGCA+TGG + chr1_2:58912002-58912021 None:intergenic 30.0%
CTCAATTGCTCACTATTATT+TGG - chr1_2:58912123-58912142 Msa0080620:five_prime_UTR 30.0%
TGCTCACTATTATTTGGATT+TGG - chr1_2:58912129-58912148 Msa0080620:five_prime_UTR 30.0%
GCTCACTATTATTTGGATTT+GGG - chr1_2:58912130-58912149 Msa0080620:five_prime_UTR 30.0%
TGATGAAAAAATTGGTAGGT+CGG - chr1_2:58912204-58912223 Msa0080620:five_prime_UTR 30.0%
TACATATGTATGGTAAGTTG+TGG - chr1_2:58912280-58912299 Msa0080620:five_prime_UTR 30.0%
TGAATGGAGATATTATACGG+CGG + chr1_2:58906049-58906068 None:intergenic 35.0%
!!! TTTTCTAAGACTGCATGAGT+TGG - chr1_2:58906205-58906224 Msa0080620:three_prime_UTR 35.0%
AACTTGAAGGAAAACCAGTT+AGG + chr1_2:58906237-58906256 None:intergenic 35.0%
TTGAAGTTTCACAAGAAACG+AGG - chr1_2:58906264-58906283 Msa0080620:three_prime_UTR 35.0%
TGATAGAAGGGTAGTAATTG+AGG + chr1_2:58906400-58906419 None:intergenic 35.0%
AATACCTCTGAGTGATAGAA+GGG + chr1_2:58906412-58906431 None:intergenic 35.0%
TAATACCTCTGAGTGATAGA+AGG + chr1_2:58906413-58906432 None:intergenic 35.0%
AGTATTCGTTATCGAACATC+TGG + chr1_2:58906525-58906544 None:intergenic 35.0%
GTAAACGAGTATAAGAGTGA+AGG - chr1_2:58906569-58906588 Msa0080620:intron 35.0%
!!! GTATTGATTTTAATCGGCAC+AGG + chr1_2:58906626-58906645 None:intergenic 35.0%
TGTCAAGACAGTATCTACAA+AGG + chr1_2:58906696-58906715 None:intergenic 35.0%
GAAAAAACAACCTACAGGTA+AGG + chr1_2:58906720-58906739 None:intergenic 35.0%
CCTATGAAAAAACAACCTAC+AGG + chr1_2:58906725-58906744 None:intergenic 35.0%
!!! CCTGTAGGTTGTTTTTTCAT+AGG - chr1_2:58906722-58906741 Msa0080620:intron 35.0%
!! CTTTGTTTGGTTTGTTGTGT+AGG - chr1_2:58906782-58906801 Msa0080620:intron 35.0%
ACATTCCACAAGTAAATAGG+GGG + chr1_2:58907083-58907102 None:intergenic 35.0%
GCTCTATACATATGGAATTG+TGG - chr1_2:58907127-58907146 Msa0080620:CDS 35.0%
ACATATGGAATTGTGGAATG+TGG - chr1_2:58907134-58907153 Msa0080620:CDS 35.0%
! AAGGTGATATCAAACGGTTT+TGG + chr1_2:58907336-58907355 None:intergenic 35.0%
CAATAAGTGTACAAGGCATA+AGG + chr1_2:58907367-58907386 None:intergenic 35.0%
AAAGTGGCTATAATTGTTGG+TGG - chr1_2:58907567-58907586 Msa0080620:intron 35.0%
!! TCCATTAATTTGCCAACCAA+GGG + chr1_2:58907594-58907613 None:intergenic 35.0%
TAGTTATATGCAGGAACTCT+CGG + chr1_2:58907624-58907643 None:intergenic 35.0%
! TGAGCCTTATAAAATCAAGC+AGG - chr1_2:58907673-58907692 Msa0080620:intron 35.0%
TCGAATTGATCTGTTATCTG+AGG - chr1_2:58908057-58908076 Msa0080620:intron 35.0%
! GGATCGAGAAGTATAAAAGT+AGG + chr1_2:58908187-58908206 None:intergenic 35.0%
CAGGATGAAATTTGGAAAGA+AGG + chr1_2:58908329-58908348 None:intergenic 35.0%
GCAGATTACAGGATGAAATT+TGG + chr1_2:58908337-58908356 None:intergenic 35.0%
! GCAACTTTTAAGCAGATTAC+AGG + chr1_2:58908348-58908367 None:intergenic 35.0%
ATCTGCTTAAAAGTTGCTTC+TGG - chr1_2:58908351-58908370 Msa0080620:intron 35.0%
AACAGAGAACTTACTGTAAC+AGG + chr1_2:58908396-58908415 None:intergenic 35.0%
TTAACCAACAAGCTTTCTAC+CGG - chr1_2:58908511-58908530 Msa0080620:intron 35.0%
ATGAAATCTTCAGGGTCTAT+GGG + chr1_2:58908637-58908656 None:intergenic 35.0%
TATGAAATCTTCAGGGTCTA+TGG + chr1_2:58908638-58908657 None:intergenic 35.0%
ACTGTCGTATGAAATCTTCA+GGG + chr1_2:58908645-58908664 None:intergenic 35.0%
TACTGTCGTATGAAATCTTC+AGG + chr1_2:58908646-58908665 None:intergenic 35.0%
ATATGCTTACATCTATCTGG+TGG - chr1_2:58908665-58908684 Msa0080620:CDS 35.0%
AAAACCAGTTGTTAAAGGTC+TGG - chr1_2:58908688-58908707 Msa0080620:CDS 35.0%
! ACAGCATTTTTAACACAGCA+TGG - chr1_2:58908821-58908840 Msa0080620:intron 35.0%
TCAAAGAAGCTTCCCAAAAA+CGG + chr1_2:58908871-58908890 None:intergenic 35.0%
AAGATTATGCTGACAATGAG+GGG - chr1_2:58908916-58908935 Msa0080620:CDS 35.0%
TATTCTTTGTCTAGCACGAA+TGG - chr1_2:58909042-58909061 Msa0080620:intron 35.0%
GGACCTCAACTAACAATATT+TGG + chr1_2:58909073-58909092 None:intergenic 35.0%
!! CCCTTCTCTTTTTAACTGTT+TGG + chr1_2:58909149-58909168 None:intergenic 35.0%
! AAATATTCTCTTTTCCAGGC+TGG - chr1_2:58909568-58909587 Msa0080620:CDS 35.0%
! AATATTCTCTTTTCCAGGCT+GGG - chr1_2:58909569-58909588 Msa0080620:CDS 35.0%
!! TCAAGCTTTATTTCTCAGCA+TGG - chr1_2:58909609-58909628 Msa0080620:CDS 35.0%
AGAAACAAGAAAAGGAGAAG+AGG + chr1_2:58909676-58909695 None:intergenic 35.0%
TGATAGGTATAATTGAAGCC+TGG - chr1_2:58909789-58909808 Msa0080620:CDS 35.0%
!!! TTTGCAATTTTGGAGTATCC+AGG + chr1_2:58909810-58909829 None:intergenic 35.0%
GATACTCCTAGATCATATCT+AGG - chr1_2:58909871-58909890 Msa0080620:intron 35.0%
AGATACTGCTTTGATGCATT+TGG - chr1_2:58909945-58909964 Msa0080620:intron 35.0%
GATACTGCTTTGATGCATTT+GGG - chr1_2:58909946-58909965 Msa0080620:intron 35.0%
ATACTGCTTTGATGCATTTG+GGG - chr1_2:58909947-58909966 Msa0080620:intron 35.0%
!! AAGCCTTATTCTCCATCATA+TGG - chr1_2:58909999-58910018 Msa0080620:CDS 35.0%
GTGCAGTATATATTTGATGG+TGG - chr1_2:58910200-58910219 Msa0080620:intron 35.0%
TTGAAGCTTGAAAGAAGTCT+TGG + chr1_2:58910362-58910381 None:intergenic 35.0%
CTTCCTTTGACATTCAAACA+TGG - chr1_2:58910397-58910416 Msa0080620:intron 35.0%
AACCCATGTTTGAATGTCAA+AGG + chr1_2:58910403-58910422 None:intergenic 35.0%
GTGATATTTGTAAAGAGGGT+TGG + chr1_2:58910572-58910591 None:intergenic 35.0%
AAATTCCTATCAATGAAGCC+TGG + chr1_2:58910679-58910698 None:intergenic 35.0%
TAGTGACCTAAATGGTGATA+TGG - chr1_2:58910723-58910742 Msa0080620:CDS 35.0%
!! AGATAGTGCGTTTTGAATAC+TGG - chr1_2:58910754-58910773 Msa0080620:CDS 35.0%
!! TGTTTCTGCAGATTTTGTCA+CGG - chr1_2:58911089-58911108 Msa0080620:intron 35.0%
CACATGTCATATGATGTTGT+AGG - chr1_2:58911118-58911137 Msa0080620:intron 35.0%
CATGTCATATGATGTTGTAG+GGG - chr1_2:58911120-58911139 Msa0080620:intron 35.0%
! TGAGATTTGCTTTGGATGAT+GGG + chr1_2:58911168-58911187 None:intergenic 35.0%
! ATGAGATTTGCTTTGGATGA+TGG + chr1_2:58911169-58911188 None:intergenic 35.0%
TCATCCAAAGCAAATCTCAT+CGG - chr1_2:58911169-58911188 Msa0080620:intron 35.0%
! GCAAATGATCCTTCTCATTT+TGG - chr1_2:58911253-58911272 Msa0080620:intron 35.0%
GCTAAACATCCAAAATGAGA+AGG + chr1_2:58911265-58911284 None:intergenic 35.0%
AATGTTGTCTCTTCTATCAG+TGG - chr1_2:58911285-58911304 Msa0080620:intron 35.0%
ACTGAGGATGATAAGAGAAA+AGG + chr1_2:58911369-58911388 None:intergenic 35.0%
ACAAGGAACGATAAATGCAA+GGG + chr1_2:58911412-58911431 None:intergenic 35.0%
AACAAGGAACGATAAATGCA+AGG + chr1_2:58911413-58911432 None:intergenic 35.0%
TAGAAATCCATAGACTGGAT+CGG + chr1_2:58911702-58911721 None:intergenic 35.0%
ATCTGACAAGTAACTTCTGT+TGG - chr1_2:58911751-58911770 Msa0080620:CDS 35.0%
TGGACAAGAACCAAATATGT+TGG - chr1_2:58911823-58911842 Msa0080620:CDS 35.0%
!!! GAAGCCTGAGATTTTTTCTA+TGG - chr1_2:58911885-58911904 Msa0080620:intron 35.0%
GCCTGTAATTCTTCTGTAAA+TGG - chr1_2:58911912-58911931 Msa0080620:intron 35.0%
ATTGAGTTAGTTAGGTGTCT+AGG - chr1_2:58911972-58911991 Msa0080620:CDS 35.0%
AGAATTGTGGTGATTCTGAT+AGG - chr1_2:58912078-58912097 Msa0080620:five_prime_UTR 35.0%
GAATTGTGGTGATTCTGATA+GGG - chr1_2:58912079-58912098 Msa0080620:five_prime_UTR 35.0%
! ATCGAAGTGTGTGTGTTTTG+TGG + chr1_2:58906129-58906148 None:intergenic 40.0%
TCTTGTGAAACTTCAAGCTG+TGG + chr1_2:58906260-58906279 None:intergenic 40.0%
ACAAGAAACGAGGACAACTA+TGG - chr1_2:58906274-58906293 Msa0080620:three_prime_UTR 40.0%
AAGAAGGAGGAATGGTGAAA+TGG + chr1_2:58906328-58906347 None:intergenic 40.0%
AACGAGTATAAGAGTGAAGG+AGG - chr1_2:58906572-58906591 Msa0080620:intron 40.0%
AGTATAAGAGTGAAGGAGGA+GGG - chr1_2:58906576-58906595 Msa0080620:intron 40.0%
CAAGACAGTATCTACAAAGG+CGG + chr1_2:58906693-58906712 None:intergenic 40.0%
!! TGTGTAGGTTTTGTCTGAAG+AGG - chr1_2:58906797-58906816 Msa0080620:intron 40.0%
AAACATCCCACCATATAACC+CGG + chr1_2:58906859-58906878 None:intergenic 40.0%
AGCACTTCATCTAAGTGACA+GGG + chr1_2:58907046-58907065 None:intergenic 40.0%
! CACAAGTAAATAGGGGGTTT+TGG + chr1_2:58907077-58907096 None:intergenic 40.0%
CAAAACCCCCTATTTACTTG+TGG - chr1_2:58907075-58907094 Msa0080620:CDS 40.0%
AAGGCATAAGGCACGTAATA+AGG + chr1_2:58907355-58907374 None:intergenic 40.0%
CTTATTGATGTTTGTGTGGC+TGG - chr1_2:58907380-58907399 Msa0080620:intron 40.0%
! CAAATTTTGTGGAGCAGCTT+TGG - chr1_2:58907469-58907488 Msa0080620:intron 40.0%
GCTTGAATGAATCAAGGCAA+TGG + chr1_2:58907514-58907533 None:intergenic 40.0%
CAAGAGGCTTGAATGAATCA+AGG + chr1_2:58907520-58907539 None:intergenic 40.0%
!! TATAATTGTTGGTGGTCCCT+TGG - chr1_2:58907575-58907594 Msa0080620:intron 40.0%
TCCCTTGGTTGGCAAATTAA+TGG - chr1_2:58907590-58907609 Msa0080620:intron 40.0%
!! GTCCATTAATTTGCCAACCA+AGG + chr1_2:58907595-58907614 None:intergenic 40.0%
AGCTGCTGATAATAACTGAG+TGG + chr1_2:58907743-58907762 None:intergenic 40.0%
AATGTAGACACTGAAGTAGG+AGG + chr1_2:58907790-58907809 None:intergenic 40.0%
AGCAATGTAGACACTGAAGT+AGG + chr1_2:58907793-58907812 None:intergenic 40.0%
GAAACCAATACGACAAACCA+TGG + chr1_2:58907823-58907842 None:intergenic 40.0%
!! TTTGTCGTATTGGTTTCAGC+TGG - chr1_2:58907826-58907845 Msa0080620:intron 40.0%
!! TTGTCGTATTGGTTTCAGCT+GGG - chr1_2:58907827-58907846 Msa0080620:intron 40.0%
! TATTGAGAAGCTTTGTGGTG+TGG - chr1_2:58907852-58907871 Msa0080620:intron 40.0%
AAACTACATGTCAAGGGAAC+AGG + chr1_2:58907937-58907956 None:intergenic 40.0%
!! AGTTGCTTCTGGCTTAATGA+TGG - chr1_2:58908362-58908381 Msa0080620:intron 40.0%
!! GTTGCTTCTGGCTTAATGAT+GGG - chr1_2:58908363-58908382 Msa0080620:intron 40.0%
CTGAAGGAAGTTAATGAACG+AGG + chr1_2:58908427-58908446 None:intergenic 40.0%
TTCATCGAATGATCTGCAAC+AGG + chr1_2:58908566-58908585 None:intergenic 40.0%
GGTGGAAAACCAGTTGTTAA+AGG - chr1_2:58908683-58908702 Msa0080620:CDS 40.0%
! TTCCTAAATGGTCCCGTTTT+TGG - chr1_2:58908855-58908874 Msa0080620:intron 40.0%
!! TCCTAAATGGTCCCGTTTTT+GGG - chr1_2:58908856-58908875 Msa0080620:intron 40.0%
CAAAGAAGCTTCCCAAAAAC+GGG + chr1_2:58908870-58908889 None:intergenic 40.0%
ATCATAACTTCACTCCAAGG+TGG + chr1_2:58909094-58909113 None:intergenic 40.0%
!!! GGACCGAGGATTAGTTTTTT+AGG - chr1_2:58909310-58909329 Msa0080620:intron 40.0%
TTACATCCATCCATCATTGG+AGG - chr1_2:58909380-58909399 Msa0080620:intron 40.0%
! CTAAATCCTCCAATGATGGA+TGG + chr1_2:58909389-58909408 None:intergenic 40.0%
TCCATCATTGGAGGATTTAG+CGG - chr1_2:58909389-58909408 Msa0080620:intron 40.0%
! TAGCGGAATGTGTGCTTTTA+TGG - chr1_2:58909406-58909425 Msa0080620:intron 40.0%
! AGCGGAATGTGTGCTTTTAT+GGG - chr1_2:58909407-58909426 Msa0080620:intron 40.0%
! ATATTCTCTTTTCCAGGCTG+GGG - chr1_2:58909570-58909589 Msa0080620:CDS 40.0%
GCTGTTGCTGTATATATGAG+TGG - chr1_2:58909631-58909650 Msa0080620:CDS 40.0%
CAATCCACTAGTAACTACCA+AGG + chr1_2:58909766-58909785 None:intergenic 40.0%
!! TAGGAGTATCGTATGAGTGT+CGG + chr1_2:58909861-58909880 None:intergenic 40.0%
ATGCTCCCTAGATATGATCT+AGG + chr1_2:58909880-58909899 None:intergenic 40.0%
! TCGCCATATGATGGAGAATA+AGG + chr1_2:58910005-58910024 None:intergenic 40.0%
TAATTCCTCTCGCCATATGA+TGG + chr1_2:58910014-58910033 None:intergenic 40.0%
TAAAAGTGATCCAAAAGGGG+AGG - chr1_2:58910070-58910089 Msa0080620:intron 40.0%
AAAAGTGATCCAAAAGGGGA+GGG - chr1_2:58910071-58910090 Msa0080620:intron 40.0%
TTATGGGACAAGGAAAGACA+AGG - chr1_2:58910156-58910175 Msa0080620:intron 40.0%
ACAAGGAAAGACAAGGTTGT+GGG - chr1_2:58910163-58910182 Msa0080620:intron 40.0%
! TGGTGTTGGACTTCTTGAAT+TGG - chr1_2:58910220-58910239 Msa0080620:intron 40.0%
TTGGACTTCTTGAATTGGCT+GGG - chr1_2:58910225-58910244 Msa0080620:intron 40.0%
!! AAGTCTTGGCTCTACTGAAT+TGG + chr1_2:58910348-58910367 None:intergenic 40.0%
GTGATTGTCACCTACTGATA+TGG - chr1_2:58910522-58910541 Msa0080620:CDS 40.0%
TGTATCCAGGCTTCATTGAT+AGG - chr1_2:58910671-58910690 Msa0080620:intron 40.0%
CATCCAAAGCAAATCTCATC+GGG - chr1_2:58911170-58911189 Msa0080620:intron 40.0%
TTGTCTCTTCTATCAGTGGT+TGG - chr1_2:58911289-58911308 Msa0080620:intron 40.0%
!!! AGGCTTTTTTGTTCGTCTGT+TGG + chr1_2:58911349-58911368 None:intergenic 40.0%
AAGTTGAGGATCACAAGTGA+AGG + chr1_2:58911490-58911509 None:intergenic 40.0%
ATCCAACAGTCTTTGCAACA+AGG + chr1_2:58911802-58911821 None:intergenic 40.0%
GTTGGAAACAATTAGCATGG+TGG - chr1_2:58911841-58911860 Msa0080620:intron 40.0%
AAATCTCAGGCTTCTGTATC+AGG + chr1_2:58911879-58911898 None:intergenic 40.0%
! TGAGTTGGACGAAACCTAAC+TGG - chr1_2:58906220-58906239 Msa0080620:three_prime_UTR 45.0%
CTTCAAGCTGTGGAACTTGA+AGG + chr1_2:58906250-58906269 None:intergenic 45.0%
ATGCGAGAAAGAAGGAGGAA+TGG + chr1_2:58906336-58906355 None:intergenic 45.0%
!! GAAGGTTGATGCGAGAAAGA+AGG + chr1_2:58906344-58906363 None:intergenic 45.0%
CGATAGCGTAATCTCGAAGA+AGG + chr1_2:58906362-58906381 None:intergenic 45.0%
ACTACCCTTCTATCACTCAG+AGG - chr1_2:58906405-58906424 Msa0080620:three_prime_UTR 45.0%
GAGTATAAGAGTGAAGGAGG+AGG - chr1_2:58906575-58906594 Msa0080620:intron 45.0%
TTAATCGGCACAGGACATTC+AGG + chr1_2:58906617-58906636 None:intergenic 45.0%
GTCTTGACATCCTTACCTGT+AGG - chr1_2:58906707-58906726 Msa0080620:intron 45.0%
GAGCACTTCATCTAAGTGAC+AGG + chr1_2:58907047-58907066 None:intergenic 45.0%
TGGAATTGTGGAATGTGGCA+TGG - chr1_2:58907139-58907158 Msa0080620:CDS 45.0%
AACTTCAGATGTGCCTAGCT+TGG - chr1_2:58907285-58907304 Msa0080620:intron 45.0%
GACAACAAGATCACCAAGCT+AGG + chr1_2:58907301-58907320 None:intergenic 45.0%
!!! AGCAGCTTTGGACTTTTGCT+TGG - chr1_2:58907481-58907500 Msa0080620:intron 45.0%
TGAATCAAGGCAATGGCAGA+AGG + chr1_2:58907507-58907526 None:intergenic 45.0%
! GGTGGGTTTCTTCACTAAAG+TGG - chr1_2:58907551-58907570 Msa0080620:intron 45.0%
ATGCAGGAACTCTCGGTAAA+TGG + chr1_2:58907617-58907636 None:intergenic 45.0%
!! TGTCGTATTGGTTTCAGCTG+GGG - chr1_2:58907828-58907847 Msa0080620:intron 45.0%
! AAGCTTTGTGGTGTGGCTTT+GGG - chr1_2:58907859-58907878 Msa0080620:intron 45.0%
GGTTTATTTCCACAGCTGAC+AGG - chr1_2:58907989-58908008 Msa0080620:intron 45.0%
CTATTAACTCCTGTCAGCTG+TGG + chr1_2:58908001-58908020 None:intergenic 45.0%
CACAGCTGACAGGAGTTAAT+AGG - chr1_2:58907999-58908018 Msa0080620:intron 45.0%
!! ATAGCTGGAGCATTGCTGTT+TGG - chr1_2:58908300-58908319 Msa0080620:intron 45.0%
CAACAGGTCTGTGATGGTTT+AGG + chr1_2:58908550-58908569 None:intergenic 45.0%
GCATCAGATGCTGACAGTAT+AGG - chr1_2:58908592-58908611 Msa0080620:intron 45.0%
TTCAGGGTCTATGGGAAGAT+CGG + chr1_2:58908629-58908648 None:intergenic 45.0%
GCTTCCAGACCTTTAACAAC+TGG + chr1_2:58908695-58908714 None:intergenic 45.0%
AATGCTGTCATCAAACTGCC+TGG + chr1_2:58908809-58908828 None:intergenic 45.0%
TCCCAAAAACGGGACCATTT+AGG + chr1_2:58908860-58908879 None:intergenic 45.0%
TTGTTAGTTGAGGTCCACCT+TGG - chr1_2:58909077-58909096 Msa0080620:intron 45.0%
GTTGTAGTCTGCATTCTGCT+TGG - chr1_2:58909200-58909219 Msa0080620:intron 45.0%
CCTCGGTCCCAAATAAAACA+AGG + chr1_2:58909299-58909318 None:intergenic 45.0%
!!! CCTTGTTTTATTTGGGACCG+AGG - chr1_2:58909296-58909315 Msa0080620:intron 45.0%
AACAAGTGAGGAGGGAAACT+TGG + chr1_2:58909352-58909371 None:intergenic 45.0%
GTAAGCCTGTAGAACAAGTG+AGG + chr1_2:58909364-58909383 None:intergenic 45.0%
GGCTTACATCCATCCATCAT+TGG - chr1_2:58909377-58909396 Msa0080620:intron 45.0%
TCCGCTAAATCCTCCAATGA+TGG + chr1_2:58909393-58909412 None:intergenic 45.0%
AACATTCGTCTCTTCGACTC+TGG - chr1_2:58909439-58909458 Msa0080620:intron 45.0%
TCGACTCTGGTCAAGCAATT+TGG - chr1_2:58909452-58909471 Msa0080620:intron 45.0%
! ACAGCCTTGGTAGTTACTAG+TGG - chr1_2:58909759-58909778 Msa0080620:CDS 45.0%
ATTCTCCATCATATGGCGAG+AGG - chr1_2:58910006-58910025 Msa0080620:CDS 45.0%
ATCCAAAAGGGGAGGGAATT+TGG - chr1_2:58910078-58910097 Msa0080620:intron 45.0%
! AACCAAATTCCCTCCCCTTT+TGG + chr1_2:58910083-58910102 None:intergenic 45.0%
GACAAGGAAAGACAAGGTTG+TGG - chr1_2:58910162-58910181 Msa0080620:intron 45.0%
GTTGGACTTCTTGAATTGGC+TGG - chr1_2:58910224-58910243 Msa0080620:intron 45.0%
! AGTCCCGATGAGATTTGCTT+TGG + chr1_2:58911176-58911195 None:intergenic 45.0%
! AGAAGTTGCTGTTGCAAGTC+TGG - chr1_2:58911198-58911217 Msa0080620:intron 45.0%
CAAAGACTGTCATCTGCCAA+TGG + chr1_2:58911625-58911644 None:intergenic 45.0%
GTAAACACCGATCCAGTCTA+TGG - chr1_2:58911692-58911711 Msa0080620:CDS 45.0%
! TGCCTTGTTGCAAAGACTGT+TGG - chr1_2:58911797-58911816 Msa0080620:CDS 45.0%
GTTGCAAAGACTGTTGGATG+TGG - chr1_2:58911803-58911822 Msa0080620:CDS 45.0%
!! ACAGACTTGCTGCAGAATTG+TGG - chr1_2:58912065-58912084 Msa0080620:exon 45.0%
! GGTTGATGCGAGAAAGAAGG+AGG + chr1_2:58906341-58906360 None:intergenic 50.0%
CTTACGTTGGTGCAGCTTGT+TGG - chr1_2:58907200-58907219 Msa0080620:CDS 50.0%
AAGAAACCCACCACAGCAAC+TGG + chr1_2:58907543-58907562 None:intergenic 50.0%
!! ATTGTTGGTGGTCCCTTGGT+TGG - chr1_2:58907579-58907598 Msa0080620:intron 50.0%
AGACACTGAAGTAGGAGGCA+CGG + chr1_2:58907785-58907804 None:intergenic 50.0%
CTACATTGCTTCTGCGTCCA+TGG - chr1_2:58907803-58907822 Msa0080620:intron 50.0%
! GCGTCCATGGTTTGTCGTAT+TGG - chr1_2:58907816-58907835 Msa0080620:intron 50.0%
GGGGCTATTGAGAAGCTTTG+TGG - chr1_2:58907847-58907866 Msa0080620:intron 50.0%
! GAAGCTTTGTGGTGTGGCTT+TGG - chr1_2:58907858-58907877 Msa0080620:intron 50.0%
! AGCTTTGTGGTGTGGCTTTG+GGG - chr1_2:58907860-58907879 Msa0080620:intron 50.0%
GGTTGCAAATGAGCGTGACT+GGG - chr1_2:58907882-58907901 Msa0080620:intron 50.0%
TTTGCTTGTGCAAGTGCGAC+TGG + chr1_2:58908025-58908044 None:intergenic 50.0%
AACGCCGGTAGAAAGCTTGT+TGG + chr1_2:58908518-58908537 None:intergenic 50.0%
TTTCTACCGGCGTTCTTGAC+CGG - chr1_2:58908524-58908543 Msa0080620:intron 50.0%
AGGTCTGTGATGGTTTAGGC+CGG + chr1_2:58908546-58908565 None:intergenic 50.0%
GATCTGCAACAGGTCTGTGA+TGG + chr1_2:58908556-58908575 None:intergenic 50.0%
GGTCTGGAAGCTATCAAGCT+CGG - chr1_2:58908704-58908723 Msa0080620:CDS 50.0%
!! CTCGGCTGGAAAGAGTATCT+AGG - chr1_2:58908722-58908741 Msa0080620:CDS 50.0%
GCAATACTAGCAGGAAGGAC+TGG + chr1_2:58908752-58908771 None:intergenic 50.0%
TCCTTCCTGCTAGTATTGCG+TGG - chr1_2:58908753-58908772 Msa0080620:CDS 50.0%
CCTTCCTGCTAGTATTGCGT+GGG - chr1_2:58908754-58908773 Msa0080620:CDS 50.0%
TCCCTCCTCACTTGTTCTAC+AGG - chr1_2:58909356-58909375 Msa0080620:intron 50.0%
GCCTGTAGAACAAGTGAGGA+GGG + chr1_2:58909360-58909379 None:intergenic 50.0%
AGCCTGTAGAACAAGTGAGG+AGG + chr1_2:58909361-58909380 None:intergenic 50.0%
GCAGCGCATATGATGCAACT+TGG + chr1_2:58910646-58910665 None:intergenic 50.0%
TGCGCTGCGTATATGTATCC+AGG - chr1_2:58910658-58910677 Msa0080620:intron 50.0%
! CTGCAGATTTTGTCACGGCT+AGG - chr1_2:58911094-58911113 Msa0080620:intron 50.0%
GGGCGCAGATTATCCAAACT+GGG - chr1_2:58911140-58911159 Msa0080620:intron 50.0%
!! TGGATGATGGGATCCCAGTT+TGG + chr1_2:58911156-58911175 None:intergenic 50.0%
CTGGCAGAGTCTCTAATGCT+TGG - chr1_2:58911217-58911236 Msa0080620:intron 50.0%
! TATCAGTGGTTGGTGCAGCA+TGG - chr1_2:58911299-58911318 Msa0080620:intron 50.0%
CAGCATGGATGTTCTGCAGA+TGG - chr1_2:58911314-58911333 Msa0080620:intron 50.0%
CTTTGCAACAAGGCAGCTAG+TGG + chr1_2:58911792-58911811 None:intergenic 50.0%
TCTCAGGCTTCTGTATCAGG+TGG + chr1_2:58911876-58911895 None:intergenic 50.0%
GCATGCTCTTGCAGCTACTC+CGG - chr1_2:58906824-58906843 Msa0080620:intron 55.0%
ACCCTGCCGGGTTATATGGT+GGG - chr1_2:58906850-58906869 Msa0080620:intron 55.0%
TCCCACCATATAACCCGGCA+GGG + chr1_2:58906854-58906873 None:intergenic 55.0%
ATCCCACCATATAACCCGGC+AGG + chr1_2:58906855-58906874 None:intergenic 55.0%
AAGCCTCTTGCCAGTTGCTG+TGG - chr1_2:58907530-58907549 Msa0080620:intron 55.0%
CTCTTGCCAGTTGCTGTGGT+GGG - chr1_2:58907534-58907553 Msa0080620:intron 55.0%
!! GCTTTGTGGTGTGGCTTTGG+GGG - chr1_2:58907861-58907880 Msa0080620:intron 55.0%
GGGTTGCAAATGAGCGTGAC+TGG - chr1_2:58907881-58907900 Msa0080620:intron 55.0%
TTTAGGCCGGTCAAGAACGC+CGG + chr1_2:58908533-58908552 None:intergenic 55.0%
TGGAAGCTATCAAGCTCGGC+TGG - chr1_2:58908708-58908727 Msa0080620:CDS 55.0%
CCCACGCAATACTAGCAGGA+AGG + chr1_2:58908757-58908776 None:intergenic 55.0%
AGCACCCACGCAATACTAGC+AGG + chr1_2:58908761-58908780 None:intergenic 55.0%
! TTTTCCAGGCTGGGGCAGTT+GGG - chr1_2:58909578-58909597 Msa0080620:CDS 55.0%
GGGGAGGGAATTTGGTTGTG+TGG - chr1_2:58910086-58910105 Msa0080620:intron 55.0%
GGGGCGCAGATTATCCAAAC+TGG - chr1_2:58911139-58911158 Msa0080620:intron 55.0%
TATAACCCGGCAGGGTGTGC+CGG + chr1_2:58906846-58906865 None:intergenic 60.0%
GCACACCCTGCCGGGTTATA+TGG - chr1_2:58906846-58906865 Msa0080620:intron 60.0%
CACCCTGCCGGGTTATATGG+TGG - chr1_2:58906849-58906868 Msa0080620:intron 60.0%
CCACCACAGCAACTGGCAAG+AGG + chr1_2:58907536-58907555 None:intergenic 60.0%
CCTCTTGCCAGTTGCTGTGG+TGG - chr1_2:58907533-58907552 Msa0080620:intron 60.0%
TGAGCGTGACTGGGTTGTGC+TGG - chr1_2:58907891-58907910 Msa0080620:intron 60.0%
! CTTTTCCAGGCTGGGGCAGT+TGG - chr1_2:58909577-58909596 Msa0080620:CDS 60.0%
GCTACTCCGGCACACCCTGC+CGG - chr1_2:58906837-58906856 Msa0080620:intron 70.0%
CTACTCCGGCACACCCTGCC+GGG - chr1_2:58906838-58906857 Msa0080620:intron 70.0%
CCAACCCAACTGCCCCAGCC+TGG + chr1_2:58909585-58909604 None:intergenic 70.0%
CCAGGCTGGGGCAGTTGGGT+TGG - chr1_2:58909582-58909601 Msa0080620:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 58905993 58912368 58905993 ID=Msa0080620;Name=Msa0080620
chr1_2 mRNA 58905993 58912368 58905993 ID=Msa0080620-mRNA-1;Parent=Msa0080620;Name=Msa0080620-mRNA-1;_AED=0.06;_eAED=0.06;_QI=300|0.76|0.78|1|0.76|0.71|14|452|593
chr1_2 exon 58905993 58906082 58905993 ID=Msa0080620-mRNA-1:exon:19035;Parent=Msa0080620-mRNA-1
chr1_2 exon 58906106 58906582 58906106 ID=Msa0080620-mRNA-1:exon:19034;Parent=Msa0080620-mRNA-1
chr1_2 exon 58907038 58907261 58907038 ID=Msa0080620-mRNA-1:exon:19033;Parent=Msa0080620-mRNA-1
chr1_2 exon 58908662 58908775 58908662 ID=Msa0080620-mRNA-1:exon:19032;Parent=Msa0080620-mRNA-1
chr1_2 exon 58908877 58908983 58908877 ID=Msa0080620-mRNA-1:exon:19031;Parent=Msa0080620-mRNA-1
chr1_2 exon 58909519 58909665 58909519 ID=Msa0080620-mRNA-1:exon:19030;Parent=Msa0080620-mRNA-1
chr1_2 exon 58909748 58909865 58909748 ID=Msa0080620-mRNA-1:exon:19029;Parent=Msa0080620-mRNA-1
chr1_2 exon 58909960 58910061 58909960 ID=Msa0080620-mRNA-1:exon:19028;Parent=Msa0080620-mRNA-1
chr1_2 exon 58910283 58910357 58910283 ID=Msa0080620-mRNA-1:exon:19027;Parent=Msa0080620-mRNA-1
chr1_2 exon 58910449 58910625 58910449 ID=Msa0080620-mRNA-1:exon:19026;Parent=Msa0080620-mRNA-1
chr1_2 exon 58910711 58910903 58910711 ID=Msa0080620-mRNA-1:exon:19025;Parent=Msa0080620-mRNA-1
chr1_2 exon 58911502 58911557 58911502 ID=Msa0080620-mRNA-1:exon:19024;Parent=Msa0080620-mRNA-1
chr1_2 exon 58911637 58911856 58911637 ID=Msa0080620-mRNA-1:exon:19023;Parent=Msa0080620-mRNA-1
chr1_2 exon 58911935 58912368 58911935 ID=Msa0080620-mRNA-1:exon:19022;Parent=Msa0080620-mRNA-1
chr1_2 five_prime_UTR 58912069 58912368 58912069 ID=Msa0080620-mRNA-1:five_prime_utr;Parent=Msa0080620-mRNA-1
chr1_2 CDS 58911935 58912068 58911935 ID=Msa0080620-mRNA-1:cds;Parent=Msa0080620-mRNA-1
chr1_2 CDS 58911637 58911856 58911637 ID=Msa0080620-mRNA-1:cds;Parent=Msa0080620-mRNA-1
chr1_2 CDS 58911502 58911557 58911502 ID=Msa0080620-mRNA-1:cds;Parent=Msa0080620-mRNA-1
chr1_2 CDS 58910711 58910903 58910711 ID=Msa0080620-mRNA-1:cds;Parent=Msa0080620-mRNA-1
chr1_2 CDS 58910449 58910625 58910449 ID=Msa0080620-mRNA-1:cds;Parent=Msa0080620-mRNA-1
chr1_2 CDS 58910283 58910357 58910283 ID=Msa0080620-mRNA-1:cds;Parent=Msa0080620-mRNA-1
chr1_2 CDS 58909960 58910061 58909960 ID=Msa0080620-mRNA-1:cds;Parent=Msa0080620-mRNA-1
chr1_2 CDS 58909748 58909865 58909748 ID=Msa0080620-mRNA-1:cds;Parent=Msa0080620-mRNA-1
chr1_2 CDS 58909519 58909665 58909519 ID=Msa0080620-mRNA-1:cds;Parent=Msa0080620-mRNA-1
chr1_2 CDS 58908877 58908983 58908877 ID=Msa0080620-mRNA-1:cds;Parent=Msa0080620-mRNA-1
chr1_2 CDS 58908662 58908775 58908662 ID=Msa0080620-mRNA-1:cds;Parent=Msa0080620-mRNA-1
chr1_2 CDS 58907038 58907261 58907038 ID=Msa0080620-mRNA-1:cds;Parent=Msa0080620-mRNA-1
chr1_2 CDS 58906468 58906582 58906468 ID=Msa0080620-mRNA-1:cds;Parent=Msa0080620-mRNA-1
chr1_2 three_prime_UTR 58906106 58906467 58906106 ID=Msa0080620-mRNA-1:three_prime_utr;Parent=Msa0080620-mRNA-1
chr1_2 three_prime_UTR 58905993 58906082 58905993 ID=Msa0080620-mRNA-1:three_prime_utr;Parent=Msa0080620-mRNA-1
Gene Sequence

>Msa0080620

ATGGTTATTGCTTCGCCCACTTTTAATCTCATCCATTTCACCATTCCTCCTTCTTTCTCGCATCAACCTTCTTCGAGATTACGCTATCGCTGTAAACGATTAAACCTCAATTACTACCCTTCTATCACTCAGAGATTTGCTTGTATAAGTTCCAGATGTTCGATAACGAATACTGATATACAATTGGAATTGGATCATGTAAACGAGTATAAGAGTGAAGGAGGAGGGTGTGCAATTGTTGAACCTGAATGTCCTGTGCCGATTAAAATCAATACTGATATTCTGGTGGAGAATGATTCTTTGAATTTACTCTCTGAAACCGCCTTTGTAGATACTGTCTTGACATCCTTACCTGTTTTGTCTGAAGAGGAACAGCATGCTCTTGCAGCTACTCCGGCACACCCTGCCGGTTGCATTGTTGCAAATTTTGTGGAGCAGCTTTGGACTTTTGCTTGGCCTTCTGCCATTGCCTTGATTCATTCAAGCCTCTTGCCAGTTGCTGTGGTGGGTTTCTTCACTAAAGTGGCTATAATTGTTGGTGGTCCCTTGGTTGGCAAATTAATGGACCATTTACCGAGAGTTCCTGCATATAACTACTTAACTGCAGCCACTCAGTTATTATCAGCAGCTATGATTATACATGCTCATTCCGTGCCTCCTACTTCAGTGTCTACATTGCTTCTGCGTCCATGGTTTGTCGTATTGGTTTCAGCTGGGGCTATTGAGAAGCTTTGTGGTGTGGCTTTGGGGGTTGCAAATGAGCGTGACTGGGTTGTGCTGCTGACAGGAGTTAATAGGCCAGTCGCACTTGCACAAGCAAATGCTGTTCTAAATCGAATTGATCTGTTATCTGAGATAGCTGGAGCATTGCTGTTTGGAGTCCTTCTTTCCAAATTTCATCCTGTAATCTGCTTAAAAGTTGCTTCTGGCTTAATGATGGGACTACTGCCTGTTACAATTATTTTAACATGTTTAACCAACAAGCTTTCTACCGGCGTTCTTGACCGGCCTAAACCATCACAGACCTGTTGCAGATCATTCGATGAAGATTCTGCATCAGATGCTGACAGTATAGTTGTTAAAGGTCTGGAAGCTATCAAGCTCGGCTGGAAAGAGTATCTAGGTCAGCCAGTCCTTCCTGCTAGTATTGCGTGGGTGCTTCTCTACTTCAATATTGTTCTTACACCAGGCAGTTTGATGACAGCATTTTTAACACAGCATGGCTTACATCCATCCATCATTGGAGGATTTAGCGGAATGTGTGCTTTTATGGGTGTTGCAGCAACATTCGTCTCTTCGACTCTGGTCAAGCAATTTGGCATTTTAAAGGCTGGGGCAGTTGGGTTGGTGTTTCAAGCTTTATTTCTCAGCATGGCTGTTGCTGTATATATGAGTGGATCAATATCACATCAGAGTCCTCTTCTCCTTTTCTTGTTTCTGATTATTTTGTCACGGCTAGGACACATGTCATATGATGTTGTAGGGGCGCAGATTATCCAAACTGGGATCCCATCATCCAAAGCAAATCTCATCGGGACTACAGAAGTTGCTGTTGCAAGTCTGGCAGAGTCTCTAATGCTTGGTGTTGCAATAATCGCAAATGATCCTTCTCATTTTGGATGTTTAGCAATGTTGTCTCTTCTATCAGTGGTTGGTGCAGCATGGATTTGTTCTGTTCCACTAGCTGCCTTGTTGCAAAGACTGTTGGATGTGGACAAGAACCAAATATGTTGGAAACAATTAGCATGGTGGATGATTTATCCACCTGATACAGAAGCCTGA
Protein sequence

>Msa0080620

MVIASPTFNLIHFTIPPSFSHQPSSRLRYRCKRLNLNYYPSITQRFACISSRCSITNTDIQLELDHVNEYKSEGGGCAIVEPECPVPIKINTDILVENDSLNLLSETAFVDTVLTSLPVLSEEEQHALAATPAHPAGCIVANFVEQLWTFAWPSAIALIHSSLLPVAVVGFFTKVAIIVGGPLVGKLMDHLPRVPAYNYLTAATQLLSAAMIIHAHSVPPTSVSTLLLRPWFVVLVSAGAIEKLCGVALGVANERDWVVLLTGVNRPVALAQANAVLNRIDLLSEIAGALLFGVLLSKFHPVICLKVASGLMMGLLPVTIILTCLTNKLSTGVLDRPKPSQTCCRSFDEDSASDADSIVVKGLEAIKLGWKEYLGQPVLPASIAWVLLYFNIVLTPGSLMTAFLTQHGLHPSIIGGFSGMCAFMGVAATFVSSTLVKQFGILKAGAVGLVFQALFLSMAVAVYMSGSISHQSPLLLFLFLIILSRLGHMSYDVVGAQIIQTGIPSSKANLIGTTEVAVASLAESLMLGVAIIANDPSHFGCLAMLSLLSVVGAAWICSVPLAALLQRLLDVDKNQICWKQLAWWMIYPPDTEA*