Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0200100 | RYR30826.1 | 55.978 | 184 | 66 | 4 | 128 | 297 | 10 | 192 | 3.17e-51 | 180 |
| Msa0200100 | RYR30826.1 | 60.317 | 252 | 89 | 2 | 1 | 242 | 1 | 251 | 1.46e-95 | 293 |
| Msa0200100 | RYR30826.1 | 63.889 | 108 | 39 | 0 | 23 | 130 | 148 | 255 | 1.68e-37 | 145 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0200100 | sp|Q06931|ABR17_PEA | 83.333 | 138 | 23 | 0 | 1 | 138 | 1 | 138 | 2.55e-73 | 225 |
| Msa0200100 | sp|Q06931|ABR17_PEA | 81.452 | 124 | 23 | 0 | 131 | 254 | 15 | 138 | 1.49e-60 | 192 |
| Msa0200100 | sp|Q06931|ABR17_PEA | 75.926 | 54 | 13 | 0 | 247 | 300 | 15 | 68 | 1.74e-16 | 78.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0200100 | A0A445AWT1 | 55.978 | 184 | 66 | 4 | 128 | 297 | 10 | 192 | 1.51e-51 | 180 |
| Msa0200100 | A0A445AWT1 | 60.317 | 252 | 89 | 2 | 1 | 242 | 1 | 251 | 6.98e-96 | 293 |
| Msa0200100 | A0A445AWT1 | 63.889 | 108 | 39 | 0 | 23 | 130 | 148 | 255 | 8.03e-38 | 145 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0037720 | Msa0200100 | 0.815249 | 1.018285e-51 | -8.615850e-47 |
| Msa0046680 | Msa0200100 | 0.819313 | 1.240113e-52 | -8.615850e-47 |
| Msa0076640 | Msa0200100 | 0.802294 | 6.007213e-49 | -8.615850e-47 |
| Msa0200090 | Msa0200100 | 0.801357 | 9.353727e-49 | -8.615850e-47 |
| Msa0200100 | Msa0200120 | 0.838371 | 2.992120e-57 | -8.615850e-47 |
| Msa0200100 | Msa0232660 | -0.800221 | 1.595838e-48 | -8.615850e-47 |
| Msa0200100 | Msa0238140 | 0.814541 | 1.462063e-51 | -8.615850e-47 |
| Msa0200100 | Msa0242720 | 0.833297 | 5.783918e-56 | -8.615850e-47 |
| Msa0200100 | Msa0294200 | 0.804625 | 1.974391e-49 | -8.615850e-47 |
| Msa0200100 | Msa0421080 | 0.808449 | 3.080451e-50 | -8.615850e-47 |
| Msa0200100 | Msa0466850 | 0.821676 | 3.557790e-53 | -8.615850e-47 |
| Msa0200100 | Msa0480530 | 0.819193 | 1.320883e-52 | -8.615850e-47 |
| Msa0200100 | Msa0480540 | 0.838009 | 3.708548e-57 | -8.615850e-47 |
| Msa0200100 | Msa0480550 | 0.828475 | 8.806581e-55 | -8.615850e-47 |
| Msa0200100 | Msa0513670 | 0.828593 | 8.248889e-55 | -8.615850e-47 |
| Msa0200100 | Msa0565180 | 0.801321 | 9.513331e-49 | -8.615850e-47 |
| Msa0200100 | Msa0578460 | 0.802775 | 4.780181e-49 | -8.615850e-47 |
| Msa0200100 | Msa0588040 | 0.805046 | 1.612436e-49 | -8.615850e-47 |
| Msa0200100 | Msa0701430 | 0.809514 | 1.822530e-50 | -8.615850e-47 |
| Msa0200100 | Msa0716620 | 0.814110 | 1.820157e-51 | -8.615850e-47 |
| Msa0200100 | Msa0744540 | 0.822153 | 2.758507e-53 | -8.615850e-47 |
| Msa0200100 | Msa0744550 | 0.841020 | 6.121998e-58 | -8.615850e-47 |
| Msa0200100 | Msa0744560 | 0.831217 | 1.891841e-55 | -8.615850e-47 |
| Msa0200100 | Msa0753410 | 0.804723 | 1.883360e-49 | -8.615850e-47 |
| Msa0200100 | Msa0757510 | 0.810809 | 9.582365e-51 | -8.615850e-47 |
| Msa0200100 | Msa0826360 | 0.852789 | 3.665912e-61 | -8.615850e-47 |
| Msa0200100 | Msa0826370 | 0.836598 | 8.521649e-57 | -8.615850e-47 |
| Msa0200100 | Msa0826380 | 0.829460 | 5.084898e-55 | -8.615850e-47 |
| Msa0200100 | Msa0826450 | 0.843026 | 1.804314e-58 | -8.615850e-47 |
| Msa0200100 | Msa0829770 | -0.801680 | 8.033109e-49 | -8.615850e-47 |
| Msa0200100 | Msa0865810 | 0.848559 | 5.673860e-60 | -8.615850e-47 |
| Msa0200100 | Msa0865820 | 0.811653 | 6.288330e-51 | -8.615850e-47 |
| Msa0200100 | Msa0865830 | 0.843235 | 1.586872e-58 | -8.615850e-47 |
| Msa0200100 | Msa1049810 | 0.809002 | 2.346016e-50 | -8.615850e-47 |
| Msa0200100 | Msa1061840 | 0.801599 | 8.343927e-49 | -8.615850e-47 |
| Msa0200100 | Msa1110900 | 0.806574 | 7.699108e-50 | -8.615850e-47 |
| Msa0200100 | Msa1157200 | 0.828642 | 8.024091e-55 | -8.615850e-47 |
| Msa0200100 | Msa1192790 | -0.822471 | 2.327922e-53 | -8.615850e-47 |
| Msa0200100 | Msa1202110 | 0.801147 | 1.032664e-48 | -8.615850e-47 |
| Msa0200100 | Msa1202470 | 0.808781 | 2.615761e-50 | -8.615850e-47 |
| Msa0200100 | Msa1269200 | 0.801658 | 8.114381e-49 | -8.615850e-47 |
| Msa0200100 | Msa1327400 | -0.822565 | 2.213556e-53 | -8.615850e-47 |
| Msa0200100 | Msa1327420 | -0.819727 | 9.977725e-53 | -8.615850e-47 |
| Msa0200100 | Msa1398120 | 0.806810 | 6.865448e-50 | -8.615850e-47 |
| Msa0200100 | Msa1459920 | 0.861091 | 1.308603e-63 | -8.615850e-47 |
| Msa0200100 | Msa1459930 | 0.866387 | 2.959533e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0200100 | MtrunA17_Chr2g0295141 | 93.478 | 138 | 9 | 0 | 1 | 138 | 1 | 138 | 5.69e-86 | 254 |
| Msa0200100 | MtrunA17_Chr2g0295141 | 79.851 | 134 | 26 | 1 | 122 | 254 | 5 | 138 | 1.51e-65 | 202 |
| Msa0200100 | MtrunA17_Chr2g0295141 | 73.016 | 63 | 14 | 2 | 238 | 297 | 5 | 67 | 4.29e-18 | 79.7 |
| Msa0200100 | MtrunA17_Chr2g0295091 | 92.754 | 138 | 10 | 0 | 1 | 138 | 1 | 138 | 3.89e-85 | 252 |
| Msa0200100 | MtrunA17_Chr2g0295091 | 82.090 | 134 | 23 | 1 | 122 | 254 | 5 | 138 | 2.86e-67 | 207 |
| Msa0200100 | MtrunA17_Chr2g0295091 | 73.016 | 63 | 14 | 2 | 238 | 297 | 5 | 67 | 3.80e-18 | 79.7 |
| Msa0200100 | MtrunA17_Chr2g0295104 | 90.909 | 132 | 12 | 0 | 1 | 132 | 1 | 132 | 2.98e-80 | 240 |
| Msa0200100 | MtrunA17_Chr2g0295104 | 90.625 | 128 | 11 | 1 | 122 | 248 | 5 | 132 | 2.04e-72 | 220 |
| Msa0200100 | MtrunA17_Chr2g0295104 | 76.562 | 64 | 14 | 1 | 238 | 300 | 5 | 68 | 3.58e-21 | 87.8 |
| Msa0200100 | MtrunA17_Chr2g0295124 | 84.783 | 138 | 21 | 0 | 1 | 138 | 1 | 138 | 1.74e-76 | 230 |
| Msa0200100 | MtrunA17_Chr2g0295124 | 88.550 | 131 | 14 | 1 | 125 | 254 | 8 | 138 | 1.25e-72 | 220 |
| Msa0200100 | MtrunA17_Chr2g0295124 | 80.328 | 61 | 11 | 1 | 241 | 300 | 8 | 68 | 7.34e-22 | 89.7 |
| Msa0200100 | MtrunA17_Chr6g0462291 | 67.460 | 126 | 41 | 0 | 1 | 126 | 1 | 126 | 4.96e-55 | 176 |
| Msa0200100 | MtrunA17_Chr6g0462291 | 63.559 | 118 | 43 | 0 | 125 | 242 | 9 | 126 | 1.49e-45 | 152 |
| Msa0200100 | MtrunA17_Chr6g0462291 | 62.745 | 51 | 19 | 0 | 250 | 300 | 18 | 68 | 2.41e-12 | 64.3 |
| Msa0200100 | MtrunA17_Chr6g0462311 | 67.460 | 126 | 41 | 0 | 1 | 126 | 1 | 126 | 1.03e-54 | 175 |
| Msa0200100 | MtrunA17_Chr6g0462311 | 63.559 | 118 | 43 | 0 | 125 | 242 | 9 | 126 | 1.95e-45 | 151 |
| Msa0200100 | MtrunA17_Chr6g0462311 | 61.111 | 54 | 21 | 0 | 247 | 300 | 15 | 68 | 1.24e-12 | 64.7 |
| Msa0200100 | MtrunA17_Chr4g0067951 | 65.873 | 126 | 43 | 0 | 1 | 126 | 1 | 126 | 1.47e-53 | 172 |
| Msa0200100 | MtrunA17_Chr4g0067951 | 63.559 | 118 | 43 | 0 | 125 | 242 | 9 | 126 | 1.10e-44 | 149 |
| Msa0200100 | MtrunA17_Chr4g0067951 | 61.111 | 54 | 21 | 0 | 247 | 300 | 15 | 68 | 1.94e-12 | 64.3 |
| Msa0200100 | MtrunA17_Chr2g0295021 | 63.846 | 130 | 47 | 0 | 1 | 130 | 1 | 130 | 1.76e-53 | 172 |
| Msa0200100 | MtrunA17_Chr2g0295021 | 60.976 | 123 | 47 | 1 | 125 | 246 | 8 | 130 | 1.65e-43 | 146 |
| Msa0200100 | MtrunA17_Chr2g0295021 | 62.963 | 54 | 20 | 0 | 247 | 300 | 15 | 68 | 2.17e-13 | 66.6 |
| Msa0200100 | MtrunA17_Chr2g0295001 | 63.846 | 130 | 47 | 0 | 1 | 130 | 1 | 130 | 1.76e-53 | 172 |
| Msa0200100 | MtrunA17_Chr2g0295001 | 60.976 | 123 | 47 | 1 | 125 | 246 | 8 | 130 | 1.65e-43 | 146 |
| Msa0200100 | MtrunA17_Chr2g0295001 | 62.963 | 54 | 20 | 0 | 247 | 300 | 15 | 68 | 2.17e-13 | 66.6 |
| Msa0200100 | MtrunA17_Chr2g0295064 | 63.077 | 130 | 48 | 0 | 1 | 130 | 68 | 197 | 2.58e-51 | 168 |
| Msa0200100 | MtrunA17_Chr2g0295064 | 60.163 | 123 | 48 | 1 | 125 | 246 | 75 | 197 | 1.05e-41 | 144 |
| Msa0200100 | MtrunA17_Chr2g0295064 | 60.377 | 53 | 20 | 1 | 241 | 292 | 75 | 127 | 8.11e-11 | 60.8 |
| Msa0200100 | MtrunA17_Chr2g0295051 | 61.538 | 130 | 50 | 0 | 1 | 130 | 1 | 130 | 1.14e-50 | 164 |
| Msa0200100 | MtrunA17_Chr2g0295051 | 57.724 | 123 | 51 | 1 | 125 | 246 | 8 | 130 | 9.36e-40 | 136 |
| Msa0200100 | MtrunA17_Chr2g0295041 | 55.102 | 147 | 58 | 1 | 1 | 139 | 1 | 147 | 1.08e-47 | 157 |
| Msa0200100 | MtrunA17_Chr2g0295041 | 55.039 | 129 | 50 | 1 | 135 | 255 | 19 | 147 | 5.18e-38 | 132 |
| Msa0200100 | MtrunA17_Chr2g0295081 | 47.692 | 130 | 68 | 0 | 1 | 130 | 1 | 130 | 2.91e-37 | 130 |
| Msa0200100 | MtrunA17_Chr2g0295081 | 50.000 | 118 | 57 | 1 | 131 | 246 | 13 | 130 | 2.40e-34 | 122 |
| Msa0200100 | MtrunA17_Chr4g0067921 | 43.750 | 128 | 66 | 4 | 1 | 125 | 1 | 125 | 6.23e-24 | 95.5 |
| Msa0200100 | MtrunA17_Chr4g0067921 | 41.593 | 113 | 60 | 4 | 134 | 243 | 18 | 127 | 9.23e-19 | 81.6 |
| Msa0200100 | MtrunA17_Chr4g0067841 | 35.115 | 131 | 84 | 1 | 1 | 130 | 1 | 131 | 3.85e-23 | 93.2 |
| Msa0200100 | MtrunA17_Chr4g0067841 | 33.929 | 112 | 73 | 1 | 131 | 241 | 15 | 126 | 9.13e-18 | 79.0 |
| Msa0200100 | MtrunA17_Chr2g0295211 | 32.061 | 131 | 88 | 1 | 1 | 130 | 1 | 131 | 5.80e-22 | 90.1 |
| Msa0200100 | MtrunA17_Chr2g0295211 | 32.143 | 112 | 75 | 1 | 131 | 241 | 15 | 126 | 4.70e-18 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 80 sgRNAs with CRISPR-Local
Find 655 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATAATTTCTTGATGGTTCC+TGG | 0.258662 | 2_1:-19710094 | None:intergenic |
| AGACATGGATAACTTCTTAA+TGG | 0.289178 | 2_1:-19704788 | None:intergenic |
| GGATAGCTTCTTAATAGTTC+CGG | 0.311830 | 2_1:-19700645 | None:intergenic |
| TACAGCTTAGTGGGAGGAAC+AGG | 0.324066 | 2_1:+19701318 | Msa0200100:CDS |
| TTCAACAATTTCAACACTTT+GGG | 0.350751 | 2_1:-19700609 | None:intergenic |
| TGGGCAGCTGGAATCACCTT+TGG | 0.352078 | 2_1:-19704727 | None:intergenic |
| TGGGCAGCTGGAATCACCTT+TGG | 0.352078 | 2_1:-19710040 | None:intergenic |
| CTTCAACAATTTCAACACTT+TGG | 0.364915 | 2_1:-19700610 | None:intergenic |
| GGGCAGCTGGAATCACCTTT+GGG | 0.381427 | 2_1:-19704726 | None:intergenic |
| GGGCAGCTGGAATCACCTTT+GGG | 0.381427 | 2_1:-19710039 | None:intergenic |
| TGGGCAGCAGAAATCACCTT+TGG | 0.387864 | 2_1:-19700590 | None:intergenic |
| GTTGAAATTGTTGAAGGAAA+TGG | 0.389622 | 2_1:+19704754 | Msa0200100:CDS |
| AGATAGAGTTGCATCACCTT+TGG | 0.394288 | 2_1:-19701436 | None:intergenic |
| GATAGCTTCTTAATAGTTCC+GGG | 0.397748 | 2_1:-19700644 | None:intergenic |
| GTTGAAATTGTTGAAGGAAA+TGG | 0.402462 | 2_1:+19700617 | Msa0200100:CDS |
| AGCAGTGGATGAGGCAAACT+TGG | 0.402684 | 2_1:+19704997 | Msa0200100:CDS |
| CTTCAACAATTTCAACACTC+TGG | 0.405408 | 2_1:-19704747 | None:intergenic |
| CTTCAACAATTTCAACACTC+TGG | 0.405408 | 2_1:-19710060 | None:intergenic |
| TACAGCATAGTAGGAGGAAC+AGG | 0.409311 | 2_1:+19705028 | Msa0200100:CDS |
| AGACATGGATAATTTCTTGA+TGG | 0.415791 | 2_1:-19710101 | None:intergenic |
| AATTTGTATATAAATTATGA+TGG | 0.420511 | 2_1:+19711190 | Msa0200100:CDS |
| TTTGAGACAAGTATTGTTGC+TGG | 0.423241 | 2_1:+19705079 | Msa0200100:CDS |
| AGAGCCTTGTAGAGTTTAGC+TGG | 0.426244 | 2_1:-19700542 | None:intergenic |
| ATTTCAACACTCTGGGCAGC+TGG | 0.438114 | 2_1:-19704739 | None:intergenic |
| ATTTCAACACTCTGGGCAGC+TGG | 0.438114 | 2_1:-19710052 | None:intergenic |
| AGATAGAACTGCATCACCTT+TGG | 0.441724 | 2_1:-19705146 | None:intergenic |
| GTTGAAATTGTTGAAGGAAA+TGG | 0.443294 | 2_1:+19710067 | Msa0200100:CDS |
| GGGCAGCAGAAATCACCTTT+GGG | 0.449440 | 2_1:-19700589 | None:intergenic |
| GTTGGATGAAAGTTTAGAGA+AGG | 0.466544 | 2_1:+19705051 | Msa0200100:CDS |
| TGGATATAACTACAGCTTAG+TGG | 0.476164 | 2_1:+19701308 | Msa0200100:CDS |
| AAAATTGTTGCTGGCTCTGA+TGG | 0.476544 | 2_1:+19701378 | Msa0200100:CDS |
| GGATACAACTACAGCATAGT+AGG | 0.484797 | 2_1:+19705019 | Msa0200100:CDS |
| TTCAACAATTTCAACACTCT+GGG | 0.491385 | 2_1:-19704746 | None:intergenic |
| TTCAACAATTTCAACACTCT+GGG | 0.491385 | 2_1:-19710059 | None:intergenic |
| GCAGTGGATGAGGCAAACTT+TGG | 0.494243 | 2_1:+19701288 | Msa0200100:CDS |
| CAAATTAGATGCAGTGGATG+AGG | 0.499478 | 2_1:+19701278 | Msa0200100:CDS |
| TAATTTGTGTAGCACAAAGT+TGG | 0.501990 | 2_1:-19701262 | None:intergenic |
| CAAAGTGTTGAAATTGTTGA+AGG | 0.502542 | 2_1:+19700611 | Msa0200100:CDS |
| CAGAGTGTTGAAATTGTTGA+AGG | 0.502542 | 2_1:+19704748 | Msa0200100:CDS |
| CAGAGTGTTGAAATTGTTGA+AGG | 0.502542 | 2_1:+19710061 | Msa0200100:CDS |
| GGATATAACTACAGCTTAGT+GGG | 0.506709 | 2_1:+19701309 | Msa0200100:CDS |
| ATCTGAATTACCTTCAACAA+TGG | 0.509250 | 2_1:-19700666 | None:intergenic |
| CAAATTAGAAGCAGTGGATG+AGG | 0.520372 | 2_1:+19704988 | Msa0200100:CDS |
| AAGAAGCTATCCATTGTTGA+AGG | 0.523757 | 2_1:+19700656 | Msa0200100:CDS |
| GATAACTTCTTAATGGTGCC+AGG | 0.537289 | 2_1:-19704781 | None:intergenic |
| GAGTTGCATCACCTTTGGTA+TGG | 0.537356 | 2_1:-19701431 | None:intergenic |
| GGCTCCAGCTAAACTCTACA+AGG | 0.556705 | 2_1:+19700538 | Msa0200100:CDS |
| AGTATTGTTGCTGGATCTGA+TGG | 0.562676 | 2_1:+19705088 | Msa0200100:CDS |
| TTTCACTGAAATCTTAACAA+TGG | 0.567421 | 2_1:-19705116 | None:intergenic |
| TTATCAATTACCTTCAGACA+TGG | 0.569245 | 2_1:-19710116 | None:intergenic |
| ATTGTTGCTGGCTCTGATGG+TGG | 0.570543 | 2_1:+19701381 | Msa0200100:CDS |
| TAATTTGTGTAGCACATAGT+CGG | 0.573457 | 2_1:-19704972 | None:intergenic |
| GAAATTGTTGAAGGAAATGG+TGG | 0.582127 | 2_1:+19710070 | Msa0200100:CDS |
| GTTGAAGGAAATGGTGGACC+AGG | 0.585895 | 2_1:+19710076 | Msa0200100:CDS |
| GTTGAAGGAAATGGAGGACC+TGG | 0.587550 | 2_1:+19704763 | Msa0200100:CDS |
| AAGAAATTATCCATGTCTGA+AGG | 0.597444 | 2_1:+19710106 | Msa0200100:CDS |
| GTTGAAGGAAATGGAGGACC+CGG | 0.599694 | 2_1:+19700626 | Msa0200100:CDS |
| GTAGAGTTTAGCTGGAGCCA+CGG | 0.602676 | 2_1:-19700534 | None:intergenic |
| GCTACACAAATTAGAAGCAG+TGG | 0.603203 | 2_1:+19704982 | Msa0200100:CDS |
| TGCTGATGAAATCGTCCCAA+AGG | 0.606260 | 2_1:+19700574 | Msa0200100:CDS |
| TAATGAATTACCTTCAGACA+TGG | 0.606422 | 2_1:-19704803 | None:intergenic |
| CTTAGTGGGAGGAACAGGGT+TGG | 0.609437 | 2_1:+19701323 | Msa0200100:CDS |
| CATAGTAGGAGGAACAGGGT+TGG | 0.609437 | 2_1:+19705033 | Msa0200100:CDS |
| TGCTGATGAAATCATCCCAA+AGG | 0.616025 | 2_1:+19704711 | Msa0200100:CDS |
| TGCTGATGAAATCATCCCAA+AGG | 0.616025 | 2_1:+19710024 | Msa0200100:CDS |
| AAGAAGTTATCCATGTCTGA+AGG | 0.619942 | 2_1:+19704793 | Msa0200100:CDS |
| GAAATTGTTGAAGGAAATGG+AGG | 0.626795 | 2_1:+19700620 | Msa0200100:CDS |
| GAAATTGTTGAAGGAAATGG+AGG | 0.626795 | 2_1:+19704757 | Msa0200100:CDS |
| GCAGTGGATGAGGCAAACTT+GGG | 0.627060 | 2_1:+19704998 | Msa0200100:CDS |
| GCTACACAAATTAGATGCAG+TGG | 0.633814 | 2_1:+19701272 | Msa0200100:CDS |
| TTTCACTGAAATCTTAACAA+CGG | 0.637000 | 2_1:-19701406 | None:intergenic |
| TACAACTACAGCATAGTAGG+AGG | 0.648903 | 2_1:+19705022 | Msa0200100:CDS |
| TCAGTGAAATACCATACCAA+AGG | 0.652605 | 2_1:+19701420 | Msa0200100:CDS |
| TCAGTGAAATACCACACCAA+AGG | 0.661287 | 2_1:+19705130 | Msa0200100:CDS |
| ATTGTTGCTGGATCTGATGG+TGG | 0.674505 | 2_1:+19705091 | Msa0200100:CDS |
| GAACTGCATCACCTTTGGTG+TGG | 0.674778 | 2_1:-19705141 | None:intergenic |
| ACAGCTTAGTGGGAGGAACA+GGG | 0.680453 | 2_1:+19701319 | Msa0200100:CDS |
| TATAACTACAGCTTAGTGGG+AGG | 0.697586 | 2_1:+19701312 | Msa0200100:CDS |
| TGACGAACATGTCTCAACCG+TGG | 0.725590 | 2_1:+19700517 | Msa0200100:CDS |
| ACAGCATAGTAGGAGGAACA+GGG | 0.726335 | 2_1:+19705029 | Msa0200100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTATATAAATAATTATAA+TGG | + | chr2_1:19701219-19701238 | Msa0200100:intron | 0.0% |
| !! | ATAAAAATTATATAAAAAAA+TGG | - | chr2_1:19707557-19707576 | None:intergenic | 0.0% |
| !!! | ATTTATATTTTATTATATTT+AGG | - | chr2_1:19708729-19708748 | None:intergenic | 0.0% |
| !! | AATAAATAAATAATAAATAA+CGG | + | chr2_1:19710363-19710382 | Msa0200100:intron | 0.0% |
| !!! | TTTGTCAATTTTTAAATAAA+AGG | - | chr2_1:19700810-19700829 | None:intergenic | 10.0% |
| !!! | TTTTATACCAAAAAAAAAAA+AGG | + | chr2_1:19700936-19700955 | Msa0200100:intron | 10.0% |
| !!! | AAATAAAAGTATAACATAAA+TGG | - | chr2_1:19701023-19701042 | None:intergenic | 10.0% |
| !! | CTTAAATTAAATTAAAATGA+CGG | - | chr2_1:19701805-19701824 | None:intergenic | 10.0% |
| !! | AAAACTTATATAAATTATGA+TGG | + | chr2_1:19704929-19704948 | Msa0200100:intron | 10.0% |
| !! | TAAATTCATAATATATTCAA+AGG | + | chr2_1:19707578-19707597 | Msa0200100:intron | 10.0% |
| !! | TAAGTTAATAGTATTAATTA+GGG | - | chr2_1:19708344-19708363 | None:intergenic | 10.0% |
| !! | ATAAGTTAATAGTATTAATT+AGG | - | chr2_1:19708345-19708364 | None:intergenic | 10.0% |
| !! | ATATATATATCAAGATAAAA+AGG | - | chr2_1:19709926-19709945 | None:intergenic | 10.0% |
| !! | TTAATAACTTAATTGTAAAT+AGG | + | chr2_1:19710709-19710728 | Msa0200100:intron | 10.0% |
| !!! | TAATTTAACTTTCTTTTCTT+TGG | - | chr2_1:19700915-19700934 | None:intergenic | 15.0% |
| !!! | TTAACTTCCTTTTTTTTTTT+TGG | - | chr2_1:19700946-19700965 | None:intergenic | 15.0% |
| !! | ATTAAACATTTGCTTTAATT+TGG | + | chr2_1:19701549-19701568 | Msa0200100:intron | 15.0% |
| !! | AATAATTAAAGACTATGATA+TGG | + | chr2_1:19701593-19701612 | Msa0200100:intron | 15.0% |
| !!! | AATAATGCAAAAGAATTTTA+TGG | + | chr2_1:19701773-19701792 | Msa0200100:intron | 15.0% |
| !!! | TGTTGAAAATTTTATTGAAT+CGG | - | chr2_1:19702787-19702806 | None:intergenic | 15.0% |
| !! | ATTTCGAATGTATAAAATTT+AGG | + | chr2_1:19702989-19703008 | Msa0200100:intron | 15.0% |
| !! | TTTCGAATGTATAAAATTTA+GGG | + | chr2_1:19702990-19703009 | Msa0200100:intron | 15.0% |
| !! | GTCATATATAATCATATAAA+AGG | + | chr2_1:19703427-19703446 | Msa0200100:intron | 15.0% |
| !! | AAATAATACTGAATAATACT+AGG | + | chr2_1:19703460-19703479 | Msa0200100:intron | 15.0% |
| !!! | TTTTTAGCAAAGAATTTTTA+AGG | - | chr2_1:19704147-19704166 | None:intergenic | 15.0% |
| !! | ATATATCAAGATAGTTAAAA+AGG | - | chr2_1:19704611-19704630 | None:intergenic | 15.0% |
| !! | TGTTTAATTATCTAGTAATT+AGG | - | chr2_1:19705247-19705266 | None:intergenic | 15.0% |
| !! | TATGATTCTGTAATAAATAA+TGG | + | chr2_1:19705427-19705446 | Msa0200100:intron | 15.0% |
| !! | AACACAAAGAATTAATAAAA+TGG | + | chr2_1:19706922-19706941 | Msa0200100:intron | 15.0% |
| !! | AAACAATTATGTAAATCAAA+TGG | + | chr2_1:19707675-19707694 | Msa0200100:intron | 15.0% |
| !!! | CTTTTCAGTAAATAATTAAA+CGG | - | chr2_1:19708143-19708162 | None:intergenic | 15.0% |
| !! | AAAAAATAATAAATGCATCT+AGG | - | chr2_1:19708309-19708328 | None:intergenic | 15.0% |
| !! | AAGTTAATAGTATTAATTAG+GGG | - | chr2_1:19708343-19708362 | None:intergenic | 15.0% |
| !! | TTGAATGGTAAAAAATTTAA+AGG | + | chr2_1:19708543-19708562 | Msa0200100:intron | 15.0% |
| !!! | TACTATTTTATTTTTAATGG+AGG | - | chr2_1:19709263-19709282 | None:intergenic | 15.0% |
| !! | TTTATACTTTAATTAACATG+GGG | - | chr2_1:19709421-19709440 | None:intergenic | 15.0% |
| !! | CTTTATACTTTAATTAACAT+GGG | - | chr2_1:19709422-19709441 | None:intergenic | 15.0% |
| !! | TGGAAATATATGTAATAAAT+AGG | + | chr2_1:19709465-19709484 | Msa0200100:intron | 15.0% |
| !! | TTATCTTGATATATATATCA+TGG | + | chr2_1:19709928-19709947 | Msa0200100:intron | 15.0% |
| !! | TATCTTGATATATATATCAT+GGG | + | chr2_1:19709929-19709948 | Msa0200100:intron | 15.0% |
| !!! | TTTATTTTTTCCATGAAAAA+TGG | - | chr2_1:19710341-19710360 | None:intergenic | 15.0% |
| !! | ACATAAATTCTCAATAAATT+TGG | - | chr2_1:19710423-19710442 | None:intergenic | 15.0% |
| !! | ATAATTTCAACTATCAATTA+TGG | + | chr2_1:19710636-19710655 | Msa0200100:intron | 15.0% |
| !! | TAATTTCAACTATCAATTAT+GGG | + | chr2_1:19710637-19710656 | Msa0200100:intron | 15.0% |
| !! | AAGAAACTATAACATTTAAA+CGG | + | chr2_1:19711021-19711040 | Msa0200100:intron | 15.0% |
| !! | AATTTAACTAAAGATTGTTT+CGG | - | chr2_1:19711149-19711168 | None:intergenic | 15.0% |
| !! | AATAGTAATCCAATTCTATT+TGG | + | chr2_1:19700985-19701004 | Msa0200100:intron | 20.0% |
| !!! | GTTTAATTTGCTAGTAATTA+GGG | - | chr2_1:19701536-19701555 | None:intergenic | 20.0% |
| !!! | TGTTTAATTTGCTAGTAATT+AGG | - | chr2_1:19701537-19701556 | None:intergenic | 20.0% |
| !!! | CTTTTATACTTTAGTAACAT+TGG | + | chr2_1:19702296-19702315 | Msa0200100:intron | 20.0% |
| !!! | AGGCAATATCATTAAAATTT+TGG | - | chr2_1:19702829-19702848 | None:intergenic | 20.0% |
| !!! | CTAAAAATCTATGAAGTTTT+TGG | - | chr2_1:19702883-19702902 | None:intergenic | 20.0% |
| !!! | TAATCTCAATTTTAGCAATA+AGG | + | chr2_1:19702961-19702980 | Msa0200100:intron | 20.0% |
| !!! | AATCTCAATTTTAGCAATAA+GGG | + | chr2_1:19702962-19702981 | Msa0200100:intron | 20.0% |
| !! | TTAAGTCAAACATCATTATT+AGG | + | chr2_1:19703328-19703347 | Msa0200100:intron | 20.0% |
| !! | ATTTATATAATCAAGAAGCT+AGG | + | chr2_1:19703397-19703416 | Msa0200100:intron | 20.0% |
| !! | TTTATATAATCAAGAAGCTA+GGG | + | chr2_1:19703398-19703417 | Msa0200100:intron | 20.0% |
| !! | ACTAAGATAATTAACAACAT+AGG | + | chr2_1:19703533-19703552 | Msa0200100:intron | 20.0% |
| !! | TGATAAAACATACATAAATC+AGG | + | chr2_1:19703558-19703577 | Msa0200100:intron | 20.0% |
| !! | GCTAAAAAATTTATAGCAAA+AGG | + | chr2_1:19704159-19704178 | Msa0200100:intron | 20.0% |
| !! | TTCAAAAAAGATACAACAAA+CGG | + | chr2_1:19704205-19704224 | Msa0200100:intron | 20.0% |
| !! | AACTATCTTGATATATATCA+TGG | + | chr2_1:19704615-19704634 | Msa0200100:intron | 20.0% |
| !! | ACTATCTTGATATATATCAT+GGG | + | chr2_1:19704616-19704635 | Msa0200100:intron | 20.0% |
| !!! | AAAGTTTTTTTGTTTTGAGA+GGG | - | chr2_1:19704845-19704864 | None:intergenic | 20.0% |
| !! | TTACTAGATAATTAAACACT+TGG | + | chr2_1:19705249-19705268 | Msa0200100:intron | 20.0% |
| !! | AATAATTGAAGTTTATGACA+TGG | + | chr2_1:19705303-19705322 | Msa0200100:intron | 20.0% |
| !! | ATTTATTACAGAATCATAGA+TGG | - | chr2_1:19705425-19705444 | None:intergenic | 20.0% |
| !!! | TTAAATTTTTACAATCTGCA+AGG | - | chr2_1:19706195-19706214 | None:intergenic | 20.0% |
| !!! | CTATATATCCTAAAGATTTT+GGG | - | chr2_1:19706465-19706484 | None:intergenic | 20.0% |
| !!! | TAGTTATGAAATCTAGAATT+TGG | - | chr2_1:19706761-19706780 | None:intergenic | 20.0% |
| !! | ATTTACCTTAATAAACATGA+TGG | - | chr2_1:19707396-19707415 | None:intergenic | 20.0% |
| !!! | ACAATGACTTTTCTTATATA+TGG | - | chr2_1:19707955-19707974 | None:intergenic | 20.0% |
| !!! | ATTTTCAAAACCATAAATTG+TGG | - | chr2_1:19708009-19708028 | None:intergenic | 20.0% |
| !! | AGTAGTATCATTAATAAGTA+CGG | - | chr2_1:19708080-19708099 | None:intergenic | 20.0% |
| !!! | AAACACTATCTTTCTTTTTA+CGG | + | chr2_1:19708200-19708219 | Msa0200100:intron | 20.0% |
| !! | CAAATGAGTATTTACATATA+GGG | - | chr2_1:19708246-19708265 | None:intergenic | 20.0% |
| !! | TCAAATGAGTATTTACATAT+AGG | - | chr2_1:19708247-19708266 | None:intergenic | 20.0% |
| !! | TTGAAAAGGAGTTTATATTT+AGG | - | chr2_1:19708283-19708302 | None:intergenic | 20.0% |
| !! | AAATGTGAAAAAAGCAAAAA+GGG | + | chr2_1:19708470-19708489 | Msa0200100:intron | 20.0% |
| !! | TACCATTCAAATTGTATTTA+CGG | - | chr2_1:19708533-19708552 | None:intergenic | 20.0% |
| !! | TTAAAGGATATTTGATGAAT+TGG | + | chr2_1:19708559-19708578 | Msa0200100:intron | 20.0% |
| !! | ATAATAAGTGTAAAATGTGA+AGG | - | chr2_1:19708607-19708626 | None:intergenic | 20.0% |
| !! | AAGACAATAAACAAACTAAT+GGG | - | chr2_1:19708918-19708937 | None:intergenic | 20.0% |
| !! | AAAGACAATAAACAAACTAA+TGG | - | chr2_1:19708919-19708938 | None:intergenic | 20.0% |
| !! | ATAAATCTCATGAAATAAAG+TGG | + | chr2_1:19709358-19709377 | Msa0200100:intron | 20.0% |
| !! | GCTTTATACTTTAATTAACA+TGG | - | chr2_1:19709423-19709442 | None:intergenic | 20.0% |
| !!! | TATAAAGCATTTAACAGAAA+GGG | + | chr2_1:19709435-19709454 | Msa0200100:intron | 20.0% |
| !!! | ATTTTTGGTTAGAATTGAAA+TGG | - | chr2_1:19709545-19709564 | None:intergenic | 20.0% |
| !!! | TTCAAGTTCGAATTAATTTT+TGG | - | chr2_1:19709560-19709579 | None:intergenic | 20.0% |
| !! | ATATGCAAAAAGTAAATGAA+AGG | - | chr2_1:19709899-19709918 | None:intergenic | 20.0% |
| !! | TTCAATTCAAGTATTTGAAT+AGG | + | chr2_1:19710219-19710238 | Msa0200100:intron | 20.0% |
| !!! | TGAAGCTTTAAATTTATTGA+TGG | - | chr2_1:19710310-19710329 | None:intergenic | 20.0% |
| !!! | AGTTCAAGTTTAGAATTTTA+CGG | - | chr2_1:19710458-19710477 | None:intergenic | 20.0% |
| !! | CTTATTATCATTTACGAATA+TGG | - | chr2_1:19710736-19710755 | None:intergenic | 20.0% |
| !!! | AACGGTTTATTTTTTTTTTC+CGG | + | chr2_1:19711039-19711058 | Msa0200100:intron | 20.0% |
| ! | TTCAACAATTTCAACACTTT+GGG | - | chr2_1:19700612-19700631 | None:intergenic | 25.0% |
| ! | AATAGAATCTTGAGAAATGA+AGG | + | chr2_1:19701046-19701065 | Msa0200100:intron | 25.0% |
| ! | ATAATTATTAGACATAACCC+TGG | - | chr2_1:19701092-19701111 | None:intergenic | 25.0% |
| ! | AGGGTTATGTCTAATAATTA+TGG | + | chr2_1:19701091-19701110 | Msa0200100:intron | 25.0% |
| !!! | CATCTGAATCATTTTTTTGA+AGG | - | chr2_1:19701118-19701137 | None:intergenic | 25.0% |
| ! | TTCAGATGATTATTGATACT+CGG | + | chr2_1:19701130-19701149 | Msa0200100:intron | 25.0% |
| ! | TATAATGGTTATATTGCAGA+TGG | + | chr2_1:19701234-19701253 | Msa0200100:intron | 25.0% |
| ! | TTTCACTGAAATCTTAACAA+CGG | - | chr2_1:19701409-19701428 | None:intergenic | 25.0% |
| !!! | TGAGGTTTAAGTGTTATTTT+GGG | + | chr2_1:19701684-19701703 | Msa0200100:intron | 25.0% |
| ! | TATTTATTGCAGAATACAGA+TGG | - | chr2_1:19701757-19701776 | None:intergenic | 25.0% |
| !! | TATATTTAGTTCGACTCATT+TGG | - | chr2_1:19701894-19701913 | None:intergenic | 25.0% |
| !! | CTTAATTTTCAACTCAAGTT+CGG | + | chr2_1:19701943-19701962 | Msa0200100:intron | 25.0% |
| !!! | ATGTTTTTTCTCCTAATATC+TGG | + | chr2_1:19702146-19702165 | Msa0200100:intron | 25.0% |
| ! | CTAAAGTATAAAAGAAACTC+AGG | - | chr2_1:19702290-19702309 | None:intergenic | 25.0% |
| ! | TGAAAGAAAATCAATATGAG+GGG | - | chr2_1:19702392-19702411 | None:intergenic | 25.0% |
| ! | CTGAAAGAAAATCAATATGA+GGG | - | chr2_1:19702393-19702412 | None:intergenic | 25.0% |
| ! | ACTGAAAGAAAATCAATATG+AGG | - | chr2_1:19702394-19702413 | None:intergenic | 25.0% |
| ! | GAACTTGAAACAATCATAAT+GGG | - | chr2_1:19702567-19702586 | None:intergenic | 25.0% |
| ! | TGAACTTGAAACAATCATAA+TGG | - | chr2_1:19702568-19702587 | None:intergenic | 25.0% |
| ! | ATTCTAAGTTTGTATCTACA+AGG | + | chr2_1:19702931-19702950 | Msa0200100:intron | 25.0% |
| ! | AGAGATTGATTAAAACTGTA+GGG | - | chr2_1:19703182-19703201 | None:intergenic | 25.0% |
| ! | AAGAGATTGATTAAAACTGT+AGG | - | chr2_1:19703183-19703202 | None:intergenic | 25.0% |
| ! | AGATTATGGGATTATAACTT+AGG | - | chr2_1:19703221-19703240 | None:intergenic | 25.0% |
| !! | AAATCGACTTAAGAGATTAT+GGG | - | chr2_1:19703234-19703253 | None:intergenic | 25.0% |
| ! | TAGGTCAGAATTAACATTTA+TGG | + | chr2_1:19703347-19703366 | Msa0200100:intron | 25.0% |
| !!! | TTGATTTTTAGACGATTTCA+GGG | - | chr2_1:19703645-19703664 | None:intergenic | 25.0% |
| !!! | TTTGATTTTTAGACGATTTC+AGG | - | chr2_1:19703646-19703665 | None:intergenic | 25.0% |
| ! | CAAGTGCAAATTCAAAATAA+TGG | - | chr2_1:19703669-19703688 | None:intergenic | 25.0% |
| !!! | CATTATTTTGAATTTGCACT+TGG | + | chr2_1:19703667-19703686 | Msa0200100:intron | 25.0% |
| ! | TCAAAAAAGATACAACAAAC+GGG | + | chr2_1:19704206-19704225 | Msa0200100:intron | 25.0% |
| ! | AAATTCGTAGGTGATATAAT+AGG | - | chr2_1:19704233-19704252 | None:intergenic | 25.0% |
| ! | GGTATTTATAGAAATTTGGT+AGG | - | chr2_1:19704497-19704516 | None:intergenic | 25.0% |
| ! | GAGTGGTATTTATAGAAATT+TGG | - | chr2_1:19704501-19704520 | None:intergenic | 25.0% |
| ! | ATATGCAAGAAGAAATTGTA+AGG | - | chr2_1:19704584-19704603 | None:intergenic | 25.0% |
| !!! | CAAAGTTTTTTTGTTTTGAG+AGG | - | chr2_1:19704846-19704865 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTTTCCCTCAAAA+TGG | - | chr2_1:19704918-19704937 | None:intergenic | 25.0% |
| !!! | AATTATGATGGATGTATTGT+AGG | + | chr2_1:19704941-19704960 | Msa0200100:intron | 25.0% |
| ! | TTTCACTGAAATCTTAACAA+TGG | - | chr2_1:19701409-19701428 | None:intergenic | 25.0% |
| !! | TTAAACACTTGGTTGAATTT+TGG | + | chr2_1:19705260-19705279 | Msa0200100:intron | 25.0% |
| !!! | GGTTCAATCACTTTTTAAAT+AGG | + | chr2_1:19705669-19705688 | Msa0200100:intron | 25.0% |
| !! | CTTGTATATGATTTTCTTCA+AGG | + | chr2_1:19705773-19705792 | Msa0200100:intron | 25.0% |
| !! | AAAAAGGCAAATTTTGTGTT+GGG | - | chr2_1:19705919-19705938 | None:intergenic | 25.0% |
| !! | AAAAAAGGCAAATTTTGTGT+TGG | - | chr2_1:19705920-19705939 | None:intergenic | 25.0% |
| !!! | AACACAAAATTTGCCTTTTT+TGG | + | chr2_1:19705919-19705938 | Msa0200100:intron | 25.0% |
| ! | GAAAAAATAAATTCCTAGTG+TGG | + | chr2_1:19706058-19706077 | Msa0200100:intron | 25.0% |
| !! | TAGGGGTAAACATTTTATAT+AGG | - | chr2_1:19706088-19706107 | None:intergenic | 25.0% |
| ! | ATCAAGATTAGAGAAAAACT+CGG | - | chr2_1:19706251-19706270 | None:intergenic | 25.0% |
| !!! | CCTTTTCTAAAACCATTTAA+GGG | - | chr2_1:19706275-19706294 | None:intergenic | 25.0% |
| !! | CCTATATATCCTAAAGATTT+TGG | - | chr2_1:19706466-19706485 | None:intergenic | 25.0% |
| !!! | CCAAAATCTTTAGGATATAT+AGG | + | chr2_1:19706463-19706482 | Msa0200100:intron | 25.0% |
| ! | AAATTGAAAATTCAACTCCT+TGG | - | chr2_1:19706690-19706709 | None:intergenic | 25.0% |
| !!! | TCAATTTGTTATTTGCTACA+TGG | + | chr2_1:19706703-19706722 | Msa0200100:intron | 25.0% |
| ! | GATAATATACAATATGTGCA+GGG | + | chr2_1:19707117-19707136 | Msa0200100:intron | 25.0% |
| ! | ATAATATACAATATGTGCAG+GGG | + | chr2_1:19707118-19707137 | Msa0200100:intron | 25.0% |
| ! | TACCTTAAACATGAATAAGT+GGG | - | chr2_1:19707166-19707185 | None:intergenic | 25.0% |
| ! | TTACCTTAAACATGAATAAG+TGG | - | chr2_1:19707167-19707186 | None:intergenic | 25.0% |
| ! | GAAATTTACCTTAAACATGA+TGG | - | chr2_1:19707172-19707191 | None:intergenic | 25.0% |
| ! | GAAATTTACCTTAAACATGA+TGG | - | chr2_1:19707172-19707191 | None:intergenic | 25.0% |
| ! | GAAATTTACCTTAAACATGA+TGG | - | chr2_1:19707172-19707191 | None:intergenic | 25.0% |
| ! | TCTAACCATCATGTTTATTA+AGG | + | chr2_1:19707388-19707407 | Msa0200100:intron | 25.0% |
| !!! | TTTTTTGTCAATTAGTCTAG+TGG | - | chr2_1:19707427-19707446 | None:intergenic | 25.0% |
| !!! | ATTACACATTGCTTTAAAGT+TGG | - | chr2_1:19707618-19707637 | None:intergenic | 25.0% |
| ! | AAATAAACGATATAGTACGT+AGG | + | chr2_1:19707797-19707816 | Msa0200100:intron | 25.0% |
| ! | AAGATATGATCCACAATTTA+TGG | + | chr2_1:19707996-19708015 | Msa0200100:intron | 25.0% |
| ! | AAAAGAAAGATAGTGTTTGT+TGG | - | chr2_1:19708198-19708217 | None:intergenic | 25.0% |
| !! | TATTAATTAGGGGTATGTTT+AGG | - | chr2_1:19708333-19708352 | None:intergenic | 25.0% |
| ! | TTTAATACACATCGAAACAA+AGG | + | chr2_1:19708386-19708405 | Msa0200100:intron | 25.0% |
| ! | GAAATGTGAAAAAAGCAAAA+AGG | + | chr2_1:19708469-19708488 | Msa0200100:intron | 25.0% |
| ! | TTCCGTAAATACAATTTGAA+TGG | + | chr2_1:19708528-19708547 | Msa0200100:intron | 25.0% |
| ! | TACTTAATTTAGTGTGTGTT+TGG | - | chr2_1:19708835-19708854 | None:intergenic | 25.0% |
| !! | GTATAAAGCATTTAACAGAA+AGG | + | chr2_1:19709434-19709453 | Msa0200100:intron | 25.0% |
| !! | ATAAAGCATTTAACAGAAAG+GGG | + | chr2_1:19709436-19709455 | Msa0200100:intron | 25.0% |
| !! | TTCTAGACTAATTCACATTT+TGG | + | chr2_1:19709692-19709711 | Msa0200100:intron | 25.0% |
| !! | TCTAGACTAATTCACATTTT+GGG | + | chr2_1:19709693-19709712 | Msa0200100:intron | 25.0% |
| !!! | TACTAATTTAGTTTGTGATG+CGG | - | chr2_1:19709855-19709874 | None:intergenic | 25.0% |
| !! | TTGAATTCAACAACTCTTTT+TGG | - | chr2_1:19710204-19710223 | None:intergenic | 25.0% |
| !! | TTTCAATGTTTTCAACTTCA+TGG | + | chr2_1:19710664-19710683 | Msa0200100:intron | 25.0% |
| !! | TTTTCAACTTCATGGTAAAT+AGG | + | chr2_1:19710672-19710691 | Msa0200100:intron | 25.0% |
| !!! | AAGGTATTTTGGTATTTTCA+CGG | - | chr2_1:19710848-19710867 | None:intergenic | 25.0% |
| ! | AAAATACCAAAATACCTTCA+CGG | + | chr2_1:19710850-19710869 | Msa0200100:intron | 25.0% |
| CTTCAACAATTTCAACACTT+TGG | - | chr2_1:19700613-19700632 | None:intergenic | 30.0% | |
| !! | CAAAGTGTTGAAATTGTTGA+AGG | + | chr2_1:19700611-19700630 | Msa0200100:CDS | 30.0% |
| GTTGAAATTGTTGAAGGAAA+TGG | + | chr2_1:19700617-19700636 | Msa0200100:CDS | 30.0% | |
| ATCTGAATTACCTTCAACAA+TGG | - | chr2_1:19700669-19700688 | None:intergenic | 30.0% | |
| CATGACTATCCAAATAGAAT+TGG | - | chr2_1:19700997-19701016 | None:intergenic | 30.0% | |
| ! | TAATTTGTGTAGCACAAAGT+TGG | - | chr2_1:19701265-19701284 | None:intergenic | 30.0% |
| ! | TTTGAGACAAAAATTGTTGC+TGG | + | chr2_1:19701369-19701388 | Msa0200100:CDS | 30.0% |
| !!! | GTGAGGTTTAAGTGTTATTT+TGG | + | chr2_1:19701683-19701702 | Msa0200100:intron | 30.0% |
| ! | AAACTGTAATCGAGTTTGTT+CGG | + | chr2_1:19702018-19702037 | Msa0200100:intron | 30.0% |
| ! | GGTTTAAGTTATTGCTTAAG+TGG | - | chr2_1:19702071-19702090 | None:intergenic | 30.0% |
| !! | TATTTGCTTTTACCTTAACC+AGG | - | chr2_1:19702266-19702285 | None:intergenic | 30.0% |
| TATACTTTAGTAACATTGGC+TGG | + | chr2_1:19702300-19702319 | Msa0200100:intron | 30.0% | |
| ! | ATCATAATGGGAGATAACAT+AGG | - | chr2_1:19702555-19702574 | None:intergenic | 30.0% |
| !!! | ATTCTTTTGCTATTTATGCG+AGG | - | chr2_1:19702723-19702742 | None:intergenic | 30.0% |
| TGGGATTATAACTTAGGAAA+GGG | - | chr2_1:19703215-19703234 | None:intergenic | 30.0% | |
| ATGGGATTATAACTTAGGAA+AGG | - | chr2_1:19703216-19703235 | None:intergenic | 30.0% | |
| ! | GAAATCGACTTAAGAGATTA+TGG | - | chr2_1:19703235-19703254 | None:intergenic | 30.0% |
| CAATTGAGAGTAATGACTTA+TGG | - | chr2_1:19703288-19703307 | None:intergenic | 30.0% | |
| !!! | TGTTATTTTTTACTGCATCG+TGG | - | chr2_1:19703750-19703769 | None:intergenic | 30.0% |
| !! | GCACAATTTTGAGAAGATTT+TGG | - | chr2_1:19703852-19703871 | None:intergenic | 30.0% |
| AGGTCATATGACTATGAAAT+AGG | - | chr2_1:19703883-19703902 | None:intergenic | 30.0% | |
| AAGTTGTCAGAAATGTTAAG+AGG | - | chr2_1:19703903-19703922 | None:intergenic | 30.0% | |
| CAAAAAAGATACAACAAACG+GGG | + | chr2_1:19704207-19704226 | Msa0200100:intron | 30.0% | |
| TTCAAACTTGGAAAATTCGT+AGG | - | chr2_1:19704245-19704264 | None:intergenic | 30.0% | |
| AAGCTCGCTCATTTATTTAT+GGG | - | chr2_1:19704396-19704415 | None:intergenic | 30.0% | |
| AAAGCTCGCTCATTTATTTA+TGG | - | chr2_1:19704397-19704416 | None:intergenic | 30.0% | |
| TTCAACAATTTCAACACTCT+GGG | - | chr2_1:19704749-19704768 | None:intergenic | 30.0% | |
| GTTGAAATTGTTGAAGGAAA+TGG | + | chr2_1:19700617-19700636 | Msa0200100:CDS | 30.0% | |
| AGACATGGATAACTTCTTAA+TGG | - | chr2_1:19704791-19704810 | None:intergenic | 30.0% | |
| TAATGAATTACCTTCAGACA+TGG | - | chr2_1:19704806-19704825 | None:intergenic | 30.0% | |
| ! | GAACTTTACTTCCATTTTGA+GGG | + | chr2_1:19704904-19704923 | Msa0200100:intron | 30.0% |
| ! | TAATTTGTGTAGCACATAGT+CGG | - | chr2_1:19704975-19704994 | None:intergenic | 30.0% |
| ! | AAATCTATGTGTTGATGTTG+AGG | + | chr2_1:19705392-19705411 | Msa0200100:intron | 30.0% |
| !! | AATTTTCTAGCACTTTCGTT+CGG | + | chr2_1:19705455-19705474 | Msa0200100:intron | 30.0% |
| GTGTTACAAGTCACAATTAA+TGG | - | chr2_1:19705531-19705550 | None:intergenic | 30.0% | |
| ! | TGACTTGTAACACAACTTAA+AGG | + | chr2_1:19705538-19705557 | Msa0200100:intron | 30.0% |
| AAACAACATTTAACTACCAC+CGG | - | chr2_1:19705605-19705624 | None:intergenic | 30.0% | |
| !!! | TCGTTCAACATTTTTTAACG+TGG | + | chr2_1:19705648-19705667 | Msa0200100:intron | 30.0% |
| TGGGATTGCAATTAAGTATA+AGG | - | chr2_1:19705900-19705919 | None:intergenic | 30.0% | |
| !!! | CAAAATTTGCCTTTTTTGGT+CGG | + | chr2_1:19705923-19705942 | Msa0200100:intron | 30.0% |
| TTTGATTGTGTAGATCCAAT+TGG | - | chr2_1:19705955-19705974 | None:intergenic | 30.0% | |
| TGGTTCAAAGAGACAATATA+GGG | - | chr2_1:19706106-19706125 | None:intergenic | 30.0% | |
| ATGGTTCAAAGAGACAATAT+AGG | - | chr2_1:19706107-19706126 | None:intergenic | 30.0% | |
| TAGTAACATCTAGGTTCTTA+TGG | - | chr2_1:19706126-19706145 | None:intergenic | 30.0% | |
| TGCAAAAGATAGTAACATCT+AGG | - | chr2_1:19706135-19706154 | None:intergenic | 30.0% | |
| ! | TTTTACAATCTGCAAGGAAA+TGG | - | chr2_1:19706189-19706208 | None:intergenic | 30.0% |
| ! | AACTCATCACTAGAAAGTTT+TGG | + | chr2_1:19706213-19706232 | Msa0200100:intron | 30.0% |
| !!! | CCCTTAAATGGTTTTAGAAA+AGG | + | chr2_1:19706272-19706291 | Msa0200100:intron | 30.0% |
| !!! | GCCTTTTCTAAAACCATTTA+AGG | - | chr2_1:19706276-19706295 | None:intergenic | 30.0% |
| !! | GCTCATAATTTGTTTGTCAT+TGG | + | chr2_1:19706413-19706432 | Msa0200100:intron | 30.0% |
| TGCACCATTATTAACAATGA+TGG | + | chr2_1:19706512-19706531 | Msa0200100:intron | 30.0% | |
| CAAAGCTTAAACAAGCAAAA+AGG | - | chr2_1:19706889-19706908 | None:intergenic | 30.0% | |
| GGATAATATACAATATGTGC+AGG | + | chr2_1:19707116-19707135 | Msa0200100:intron | 30.0% | |
| ACCTTAAACATGAATAAGTG+GGG | - | chr2_1:19707165-19707184 | None:intergenic | 30.0% | |
| ATTTACCTTAAACATCCTAG+TGG | - | chr2_1:19707228-19707247 | None:intergenic | 30.0% | |
| TTCTCTAACCATCATGTTTA+AGG | + | chr2_1:19707248-19707267 | Msa0200100:intron | 30.0% | |
| !!! | TTTTTTGTCAATTAGCCTAG+TGG | - | chr2_1:19707287-19707306 | None:intergenic | 30.0% |
| ATTTACCTTAAACATCCTAG+TGG | - | chr2_1:19707228-19707247 | None:intergenic | 30.0% | |
| GCAAGTCACAAATTCTATAA+AGG | + | chr2_1:19707734-19707753 | Msa0200100:intron | 30.0% | |
| TTAAAGATCGAAGTTTGACT+TGG | - | chr2_1:19707875-19707894 | None:intergenic | 30.0% | |
| TTGTGGATCATATCTTCAAA+AGG | - | chr2_1:19707992-19708011 | None:intergenic | 30.0% | |
| TTAATACACGCTCTCTAATA+TGG | + | chr2_1:19708028-19708047 | Msa0200100:intron | 30.0% | |
| TGATACTACTAGTAACAGAT+TGG | + | chr2_1:19708090-19708109 | Msa0200100:intron | 30.0% | |
| GATACTACTAGTAACAGATT+GGG | + | chr2_1:19708091-19708110 | Msa0200100:intron | 30.0% | |
| TGAGTATTTACATATAGGGA+CGG | - | chr2_1:19708242-19708261 | None:intergenic | 30.0% | |
| ATGCATCTAGGAATTTGAAA+AGG | - | chr2_1:19708297-19708316 | None:intergenic | 30.0% | |
| AGCAAAAAGGGTTTACTTAT+AGG | + | chr2_1:19708482-19708501 | Msa0200100:intron | 30.0% | |
| GCAAAAAGGGTTTACTTATA+GGG | + | chr2_1:19708483-19708502 | Msa0200100:intron | 30.0% | |
| CTACTTAAAGCTAAGTGTTT+AGG | + | chr2_1:19708675-19708694 | Msa0200100:intron | 30.0% | |
| ATCATTAATTAATTCGTGCG+TGG | + | chr2_1:19709000-19709019 | Msa0200100:intron | 30.0% | |
| GATGTATGAAAGATTTGAAG+TGG | - | chr2_1:19709046-19709065 | None:intergenic | 30.0% | |
| CAATCTTCACCTAACTTTAA+TGG | + | chr2_1:19709065-19709084 | Msa0200100:intron | 30.0% | |
| TAGAGGATTGAAAAAACTGT+CGG | + | chr2_1:19709517-19709536 | Msa0200100:intron | 30.0% | |
| ! | ATTTTTGACGCAACTTTAGA+TGG | + | chr2_1:19709586-19709605 | Msa0200100:intron | 30.0% |
| GAGTATAGATTAAAGTCACA+AGG | - | chr2_1:19709621-19709640 | None:intergenic | 30.0% | |
| TACTCCTATCTTGTAAAACA+AGG | + | chr2_1:19709636-19709655 | Msa0200100:intron | 30.0% | |
| TCTATGACTAAGTGACATAT+TGG | - | chr2_1:19709671-19709690 | None:intergenic | 30.0% | |
| ! | AAGTGAGATTTTTGCAAACA+AGG | + | chr2_1:19709780-19709799 | Msa0200100:intron | 30.0% |
| ACTATTTATAGAACTCTGGT+AGG | - | chr2_1:19709811-19709830 | None:intergenic | 30.0% | |
| GGTTACTATTTATAGAACTC+TGG | - | chr2_1:19709815-19709834 | None:intergenic | 30.0% | |
| TTCAACAATTTCAACACTCT+GGG | - | chr2_1:19704749-19704768 | None:intergenic | 30.0% | |
| GTTGAAATTGTTGAAGGAAA+TGG | + | chr2_1:19700617-19700636 | Msa0200100:CDS | 30.0% | |
| AGACATGGATAATTTCTTGA+TGG | - | chr2_1:19710104-19710123 | None:intergenic | 30.0% | |
| AAGAAATTATCCATGTCTGA+AGG | + | chr2_1:19710106-19710125 | Msa0200100:CDS | 30.0% | |
| TTATCAATTACCTTCAGACA+TGG | - | chr2_1:19710119-19710138 | None:intergenic | 30.0% | |
| CTTCAATTCTCAAATTTGAG+AGG | - | chr2_1:19710261-19710280 | None:intergenic | 30.0% | |
| CTCTCAAATTTGAGAATTGA+AGG | + | chr2_1:19710259-19710278 | Msa0200100:intron | 30.0% | |
| !! | CAAAGAACAACCATTTTTCA+TGG | + | chr2_1:19710328-19710347 | Msa0200100:intron | 30.0% |
| TACAATTCATGCAAAGGTTA+TGG | + | chr2_1:19710390-19710409 | Msa0200100:intron | 30.0% | |
| AATCAGCCTAACATAATATG+TGG | + | chr2_1:19710767-19710786 | Msa0200100:intron | 30.0% | |
| TGTAGACCACATATTATGTT+AGG | - | chr2_1:19710776-19710795 | None:intergenic | 30.0% | |
| TAGAGACGTGTAAATGTTAT+AGG | - | chr2_1:19710998-19711017 | None:intergenic | 30.0% | |
| ATCGGAGATTTGAAAGTAAT+TGG | - | chr2_1:19711124-19711143 | None:intergenic | 30.0% | |
| GAAATTGTTGAAGGAAATGG+AGG | + | chr2_1:19700620-19700639 | Msa0200100:CDS | 35.0% | |
| GATAGCTTCTTAATAGTTCC+GGG | - | chr2_1:19700647-19700666 | None:intergenic | 35.0% | |
| GGATAGCTTCTTAATAGTTC+CGG | - | chr2_1:19700648-19700667 | None:intergenic | 35.0% | |
| AAGAAGCTATCCATTGTTGA+AGG | + | chr2_1:19700656-19700675 | Msa0200100:CDS | 35.0% | |
| !! | CGGTCTAAAACAATTTTACG+CGG | - | chr2_1:19700743-19700762 | None:intergenic | 35.0% |
| ! | GTTGTACCGACAAATTTGAT+CGG | - | chr2_1:19700770-19700789 | None:intergenic | 35.0% |
| GACAAACATGATGTGACAAA+TGG | + | chr2_1:19700824-19700843 | Msa0200100:intron | 35.0% | |
| ATAATACATAAGCTCGTTCC+AGG | + | chr2_1:19701071-19701090 | Msa0200100:intron | 35.0% | |
| TAATACATAAGCTCGTTCCA+GGG | + | chr2_1:19701072-19701091 | Msa0200100:intron | 35.0% | |
| TGGATATAACTACAGCTTAG+TGG | + | chr2_1:19701308-19701327 | Msa0200100:CDS | 35.0% | |
| GGATATAACTACAGCTTAGT+GGG | + | chr2_1:19701309-19701328 | Msa0200100:CDS | 35.0% | |
| TCAGTGAAATACCATACCAA+AGG | + | chr2_1:19701420-19701439 | Msa0200100:CDS | 35.0% | |
| ACAAAAAGCCTATGTTGTGT+TGG | + | chr2_1:19701716-19701735 | Msa0200100:intron | 35.0% | |
| TGAGTCGTTATATGATGCTT+AGG | - | chr2_1:19702097-19702116 | None:intergenic | 35.0% | |
| AACATGAGATCACCAACTTT+AGG | - | chr2_1:19702131-19702150 | None:intergenic | 35.0% | |
| TTCTCCTAATATCTGGACAT+AGG | + | chr2_1:19702153-19702172 | Msa0200100:intron | 35.0% | |
| GTTTCCTATGTCCAGATATT+AGG | - | chr2_1:19702160-19702179 | None:intergenic | 35.0% | |
| ACATAGGAAACAATCTTTCG+AGG | + | chr2_1:19702169-19702188 | Msa0200100:intron | 35.0% | |
| AACCTACTTAAATGTTCGTG+AGG | + | chr2_1:19702351-19702370 | Msa0200100:intron | 35.0% | |
| ACCTACTTAAATGTTCGTGA+GGG | + | chr2_1:19702352-19702371 | Msa0200100:intron | 35.0% | |
| ! | GATTTTCTTTCAGTCCTTGT+TGG | + | chr2_1:19702400-19702419 | Msa0200100:intron | 35.0% |
| ! | ATTGGCTAGTTGGAAAACAT+GGG | + | chr2_1:19702452-19702471 | Msa0200100:intron | 35.0% |
| GGGATGAATCATTTCAACTA+AGG | - | chr2_1:19702849-19702868 | None:intergenic | 35.0% | |
| ! | ATAAAATTTAGGGTTGCCCT+AGG | + | chr2_1:19703000-19703019 | Msa0200100:intron | 35.0% |
| !!! | ATGTTCACCTAGTTTTACGA+CGG | + | chr2_1:19703151-19703170 | Msa0200100:intron | 35.0% |
| GAGTTCATACACAAAAGCTT+AGG | + | chr2_1:19703502-19703521 | Msa0200100:intron | 35.0% | |
| AATCAGGACCAATTATGAGT+TGG | + | chr2_1:19703574-19703593 | Msa0200100:intron | 35.0% | |
| ATCTCACACCAACTCATAAT+TGG | - | chr2_1:19703585-19703604 | None:intergenic | 35.0% | |
| ! | GAGATCCACTATGTGTTTTT+AGG | + | chr2_1:19703600-19703619 | Msa0200100:intron | 35.0% |
| AGTGACCTAAAAACACATAG+TGG | - | chr2_1:19703608-19703627 | None:intergenic | 35.0% | |
| !!! | ACTATGTGTTTTTAGGTCAC+TGG | + | chr2_1:19703607-19703626 | Msa0200100:intron | 35.0% |
| !! | TGAGAAGATTTTGGAAGCTT+CGG | - | chr2_1:19703843-19703862 | None:intergenic | 35.0% |
| CAATGCTCTTTGTGAAGTAT+GGG | - | chr2_1:19704331-19704350 | None:intergenic | 35.0% | |
| TCAATGCTCTTTGTGAAGTA+TGG | - | chr2_1:19704332-19704351 | None:intergenic | 35.0% | |
| GCTCATTTATTTATGGGTGA+AGG | - | chr2_1:19704390-19704409 | None:intergenic | 35.0% | |
| AGTTGAAAACTAGCTCATTG+AGG | - | chr2_1:19704436-19704455 | None:intergenic | 35.0% | |
| TGATTTACGAAAAAGCCATG+TGG | + | chr2_1:19704466-19704485 | Msa0200100:intron | 35.0% | |
| TTGTGATGCTGTTAATGACA+TGG | - | chr2_1:19704528-19704547 | None:intergenic | 35.0% | |
| CTTCAACAATTTCAACACTC+TGG | - | chr2_1:19704750-19704769 | None:intergenic | 35.0% | |
| !! | CAGAGTGTTGAAATTGTTGA+AGG | + | chr2_1:19704748-19704767 | Msa0200100:CDS | 35.0% |
| GAAATTGTTGAAGGAAATGG+AGG | + | chr2_1:19700620-19700639 | Msa0200100:CDS | 35.0% | |
| AAGAAGTTATCCATGTCTGA+AGG | + | chr2_1:19704793-19704812 | Msa0200100:CDS | 35.0% | |
| ! | CGAACTTTACTTCCATTTTG+AGG | + | chr2_1:19704903-19704922 | Msa0200100:intron | 35.0% |
| !! | TATGATGGATGTATTGTAGG+TGG | + | chr2_1:19704944-19704963 | Msa0200100:intron | 35.0% |
| GTTGGATGAAAGTTTAGAGA+AGG | + | chr2_1:19705051-19705070 | Msa0200100:CDS | 35.0% | |
| ! | TTTGAGACAAGTATTGTTGC+TGG | + | chr2_1:19705079-19705098 | Msa0200100:CDS | 35.0% |
| !! | CTTTGGTCTTAGTTTCATCA+CGG | - | chr2_1:19705180-19705199 | None:intergenic | 35.0% |
| AAACTAAGACCAAAGGAACT+GGG | + | chr2_1:19705185-19705204 | Msa0200100:intron | 35.0% | |
| !!! | ATTTTGGTTGTGTTGTGTCA+TGG | + | chr2_1:19705276-19705295 | Msa0200100:intron | 35.0% |
| !! | TTTTGGTTGTGTTGTGTCAT+GGG | + | chr2_1:19705277-19705296 | Msa0200100:intron | 35.0% |
| CAATTAATGGTCAAGGCAAT+TGG | - | chr2_1:19705518-19705537 | None:intergenic | 35.0% | |
| CAAGTCACAATTAATGGTCA+AGG | - | chr2_1:19705525-19705544 | None:intergenic | 35.0% | |
| AACAACATTTAACTACCACC+GGG | - | chr2_1:19705604-19705623 | None:intergenic | 35.0% | |
| GGTGGTAGTTAAATGTTGTT+TGG | + | chr2_1:19705604-19705623 | Msa0200100:intron | 35.0% | |
| ! | AATGTTGTTTGGCTCATCAA+CGG | + | chr2_1:19705615-19705634 | Msa0200100:intron | 35.0% |
| GGACAAAATTACTAAGCACA+TGG | + | chr2_1:19705690-19705709 | Msa0200100:intron | 35.0% | |
| TGGATCTACACAATCAAAGT+CGG | + | chr2_1:19705957-19705976 | Msa0200100:intron | 35.0% | |
| ! | CCAAATCTAAGACCAAGAAA+TGG | - | chr2_1:19706023-19706042 | None:intergenic | 35.0% |
| !! | CCATTTCTTGGTCTTAGATT+TGG | + | chr2_1:19706020-19706039 | Msa0200100:intron | 35.0% |
| TTATATAGGTCAACCACACT+AGG | - | chr2_1:19706074-19706093 | None:intergenic | 35.0% | |
| GGTTCAAAGAGACAATATAG+GGG | - | chr2_1:19706105-19706124 | None:intergenic | 35.0% | |
| CTAATCTTGATGCCCTTAAA+TGG | + | chr2_1:19706260-19706279 | Msa0200100:intron | 35.0% | |
| AATATCAACATCTTCGCCAT+TGG | + | chr2_1:19706311-19706330 | Msa0200100:intron | 35.0% | |
| AAAAAGGTAAGTAGGGATTG+TGG | - | chr2_1:19706384-19706403 | None:intergenic | 35.0% | |
| AAACAAATTATGAGCCTCCA+TGG | - | chr2_1:19706408-19706427 | None:intergenic | 35.0% | |
| ATTCTCGACCCAAAATCTTT+AGG | + | chr2_1:19706454-19706473 | Msa0200100:intron | 35.0% | |
| CCTGCCATCATTGTTAATAA+TGG | - | chr2_1:19706519-19706538 | None:intergenic | 35.0% | |
| CCATTATTAACAATGATGGC+AGG | + | chr2_1:19706516-19706535 | Msa0200100:intron | 35.0% | |
| !! | ATCTAGAATTTGGTTCTACG+AGG | - | chr2_1:19706751-19706770 | None:intergenic | 35.0% |
| TTGATCCATGACATTGATGA+TGG | + | chr2_1:19706788-19706807 | Msa0200100:intron | 35.0% | |
| ! | TGAGTTTAGCTCATATGGTA+AGG | + | chr2_1:19707094-19707113 | Msa0200100:intron | 35.0% |
| ! | GAGTTTAGCTCATATGGTAA+GGG | + | chr2_1:19707095-19707114 | Msa0200100:intron | 35.0% |
| ACCCCACTTATTCATGTTTA+AGG | + | chr2_1:19707161-19707180 | Msa0200100:intron | 35.0% | |
| TTCTCTAGCCATCATGTTTA+AGG | + | chr2_1:19707189-19707208 | Msa0200100:intron | 35.0% | |
| TTCTCTAGCCATCATGTTTA+AGG | + | chr2_1:19707189-19707208 | Msa0200100:intron | 35.0% | |
| ! | TTTTCCTTCTGCAATGTTTG+TGG | + | chr2_1:19707493-19707512 | Msa0200100:intron | 35.0% |
| ATTACCACAAACATTGCAGA+AGG | - | chr2_1:19707500-19707519 | None:intergenic | 35.0% | |
| AATTCAGTATTCCTTGCAGT+CGG | + | chr2_1:19707703-19707722 | Msa0200100:intron | 35.0% | |
| TAAACAACTCAACTCAAGGA+CGG | - | chr2_1:19707843-19707862 | None:intergenic | 35.0% | |
| AGCATAAACAACTCAACTCA+AGG | - | chr2_1:19707847-19707866 | None:intergenic | 35.0% | |
| ATGACTTATTAGCTCAGCTT+TGG | - | chr2_1:19707922-19707941 | None:intergenic | 35.0% | |
| ! | AGAAAGATAGTGTTTGTTGG+AGG | - | chr2_1:19708195-19708214 | None:intergenic | 35.0% |
| TATTTACATATAGGGACGGA+GGG | - | chr2_1:19708238-19708257 | None:intergenic | 35.0% | |
| CATCGAAACAAAGGACAATT+TGG | + | chr2_1:19708395-19708414 | Msa0200100:intron | 35.0% | |
| AAAGGGTTTACTTATAGGGA+CGG | + | chr2_1:19708487-19708506 | Msa0200100:intron | 35.0% | |
| CCAAACACACCATTAAAGTT+AGG | - | chr2_1:19709077-19709096 | None:intergenic | 35.0% | |
| CCTAACTTTAATGGTGTGTT+TGG | + | chr2_1:19709074-19709093 | Msa0200100:intron | 35.0% | |
| CAAATCTACTCTATTGCTCA+CGG | - | chr2_1:19709159-19709178 | None:intergenic | 35.0% | |
| ! | TTAACAGAAAGGGGCATAAT+TGG | + | chr2_1:19709445-19709464 | Msa0200100:intron | 35.0% |
| TAATAAATAGGTTGCTCTCC+TGG | + | chr2_1:19709477-19709496 | Msa0200100:intron | 35.0% | |
| GATTAAAGTCACAAGGAAGA+AGG | - | chr2_1:19709614-19709633 | None:intergenic | 35.0% | |
| !!! | CCTACCTTGTTTTACAAGAT+AGG | - | chr2_1:19709643-19709662 | None:intergenic | 35.0% |
| CCTATCTTGTAAAACAAGGT+AGG | + | chr2_1:19709640-19709659 | Msa0200100:intron | 35.0% | |
| TGACTAAGTGACATATTGGT+AGG | - | chr2_1:19709667-19709686 | None:intergenic | 35.0% | |
| ! | GAGATTTTTGCAAACAAGGT+AGG | + | chr2_1:19709784-19709803 | Msa0200100:intron | 35.0% |
| CTTCAACAATTTCAACACTC+TGG | - | chr2_1:19704750-19704769 | None:intergenic | 35.0% | |
| !! | CAGAGTGTTGAAATTGTTGA+AGG | + | chr2_1:19704748-19704767 | Msa0200100:CDS | 35.0% |
| GAAATTGTTGAAGGAAATGG+TGG | + | chr2_1:19700620-19700639 | Msa0200100:CDS | 35.0% | |
| ! | GATAATTTCTTGATGGTTCC+TGG | - | chr2_1:19710097-19710116 | None:intergenic | 35.0% |
| TTTGAGAATTGAAGGAGACA+TGG | + | chr2_1:19710267-19710286 | Msa0200100:intron | 35.0% | |
| GGGATATACAATTCATGCAA+AGG | + | chr2_1:19710384-19710403 | Msa0200100:intron | 35.0% | |
| CCAGTGAATCACTATTACAA+TGG | - | chr2_1:19710540-19710559 | None:intergenic | 35.0% | |
| CCATTGTAATAGTGATTCAC+TGG | + | chr2_1:19710537-19710556 | Msa0200100:intron | 35.0% | |
| TGTGGTCTACAACTATAACA+TGG | + | chr2_1:19710785-19710804 | Msa0200100:intron | 35.0% | |
| ! | TTGGTATTTTCACGGTACAT+TGG | - | chr2_1:19710840-19710859 | None:intergenic | 35.0% |
| !!! | TAACTACCGTGAAGGTATTT+TGG | - | chr2_1:19710859-19710878 | None:intergenic | 35.0% |
| CTAAAGATTGTTTCGGTCAT+CGG | - | chr2_1:19711142-19711161 | None:intergenic | 35.0% | |
| CGACAAATTTGATCGGTTGT+CGG | - | chr2_1:19700763-19700782 | None:intergenic | 40.0% | |
| CGACAACCGATCAAATTTGT+CGG | + | chr2_1:19700761-19700780 | Msa0200100:intron | 40.0% | |
| GCTACACAAATTAGATGCAG+TGG | + | chr2_1:19701272-19701291 | Msa0200100:CDS | 40.0% | |
| CAAATTAGATGCAGTGGATG+AGG | + | chr2_1:19701278-19701297 | Msa0200100:CDS | 40.0% | |
| TATAACTACAGCTTAGTGGG+AGG | + | chr2_1:19701312-19701331 | Msa0200100:CDS | 40.0% | |
| !! | AAAATTGTTGCTGGCTCTGA+TGG | + | chr2_1:19701378-19701397 | Msa0200100:CDS | 40.0% |
| AGATAGAGTTGCATCACCTT+TGG | - | chr2_1:19701439-19701458 | None:intergenic | 40.0% | |
| CTTGATAAGTCCAGTTCCTT+TGG | - | chr2_1:19701487-19701506 | None:intergenic | 40.0% | |
| CAAAGGAACTGGACTTATCA+AGG | + | chr2_1:19701485-19701504 | Msa0200100:intron | 40.0% | |
| TGTGTGTTGAGTAGACATCA+TGG | + | chr2_1:19701621-19701640 | Msa0200100:intron | 40.0% | |
| TGAGTAGACATCATGGTCTT+TGG | + | chr2_1:19701628-19701647 | Msa0200100:intron | 40.0% | |
| CCTTATCACCAACACAACAT+AGG | - | chr2_1:19701727-19701746 | None:intergenic | 40.0% | |
| !! | CCTATGTTGTGTTGGTGATA+AGG | + | chr2_1:19701724-19701743 | Msa0200100:intron | 40.0% |
| AGATCACCAACTTTAGGCAA+GGG | - | chr2_1:19702125-19702144 | None:intergenic | 40.0% | |
| ! | TTTAAGTTCAAGTTCACCCC+AGG | + | chr2_1:19702194-19702213 | Msa0200100:intron | 40.0% |
| TAGTGGAACTATCCAAACCT+GGG | - | chr2_1:19702214-19702233 | None:intergenic | 40.0% | |
| TTGGATAGTTCCACTAGGTA+TGG | + | chr2_1:19702218-19702237 | Msa0200100:intron | 40.0% | |
| TGGTTACTATCCATACCTAG+TGG | - | chr2_1:19702231-19702250 | None:intergenic | 40.0% | |
| ! | TGCTTTTACCTTAACCAGGA+GGG | - | chr2_1:19702262-19702281 | None:intergenic | 40.0% |
| !! | TTGCTTTTACCTTAACCAGG+AGG | - | chr2_1:19702263-19702282 | None:intergenic | 40.0% |
| ! | ACTTTAGTAACATTGGCTGG+TGG | + | chr2_1:19702303-19702322 | Msa0200100:intron | 40.0% |
| ATTAAGACCTCTGTCCAACA+AGG | - | chr2_1:19702417-19702436 | None:intergenic | 40.0% | |
| GACAGAGGTCTTAATGTCAA+AGG | + | chr2_1:19702422-19702441 | Msa0200100:intron | 40.0% | |
| ! | GATTGGCTAGTTGGAAAACA+TGG | + | chr2_1:19702451-19702470 | Msa0200100:intron | 40.0% |
| GTTGGAAAACATGGGTAAGT+TGG | + | chr2_1:19702460-19702479 | Msa0200100:intron | 40.0% | |
| AACCCAAAGTCTCCTATCAT+AGG | + | chr2_1:19702498-19702517 | Msa0200100:intron | 40.0% | |
| GACCTATGATAGGAGACTTT+GGG | - | chr2_1:19702503-19702522 | None:intergenic | 40.0% | |
| AGACCTATGATAGGAGACTT+TGG | - | chr2_1:19702504-19702523 | None:intergenic | 40.0% | |
| GAGACTAGTGTATTGTGTTC+TGG | + | chr2_1:19702596-19702615 | Msa0200100:intron | 40.0% | |
| !! | GTGTATTGTGTTCTGGAACT+AGG | + | chr2_1:19702603-19702622 | Msa0200100:intron | 40.0% |
| GTGAGGAATAGACGATTTGA+AGG | - | chr2_1:19703102-19703121 | None:intergenic | 40.0% | |
| GGAGCAAATTATTCACAGTG+AGG | - | chr2_1:19703119-19703138 | None:intergenic | 40.0% | |
| GGTTAATCCGTCGTAAAACT+AGG | - | chr2_1:19703161-19703180 | None:intergenic | 40.0% | |
| TTTAGACGATTTCAGGGCAT+AGG | - | chr2_1:19703639-19703658 | None:intergenic | 40.0% | |
| ATGTATCGTGGCATGTTTGA+AGG | - | chr2_1:19703792-19703811 | None:intergenic | 40.0% | |
| ATTTGGTAGGACATACCACA+TGG | - | chr2_1:19704484-19704503 | None:intergenic | 40.0% | |
| ATGCTGTTAATGACATGGTG+AGG | - | chr2_1:19704523-19704542 | None:intergenic | 40.0% | |
| TGATGAACATGTCTCAACTG+TGG | + | chr2_1:19704654-19704673 | Msa0200100:intron | 40.0% | |
| ! | AGAGCTTTGTAGAGTTTAGC+TGG | - | chr2_1:19704682-19704701 | None:intergenic | 40.0% |
| TGCTGATGAAATCATCCCAA+AGG | + | chr2_1:19704711-19704730 | Msa0200100:CDS | 40.0% | |
| GATAACTTCTTAATGGTGCC+AGG | - | chr2_1:19704784-19704803 | None:intergenic | 40.0% | |
| GCTACACAAATTAGAAGCAG+TGG | + | chr2_1:19704982-19705001 | Msa0200100:CDS | 40.0% | |
| CAAATTAGAAGCAGTGGATG+AGG | + | chr2_1:19704988-19705007 | Msa0200100:CDS | 40.0% | |
| GGATACAACTACAGCATAGT+AGG | + | chr2_1:19705019-19705038 | Msa0200100:CDS | 40.0% | |
| TACAACTACAGCATAGTAGG+AGG | + | chr2_1:19705022-19705041 | Msa0200100:CDS | 40.0% | |
| AGTATTGTTGCTGGATCTGA+TGG | + | chr2_1:19705088-19705107 | Msa0200100:CDS | 40.0% | |
| TCAGTGAAATACCACACCAA+AGG | + | chr2_1:19705130-19705149 | Msa0200100:CDS | 40.0% | |
| AGATAGAACTGCATCACCTT+TGG | - | chr2_1:19705149-19705168 | None:intergenic | 40.0% | |
| CGTGATGAAACTAAGACCAA+AGG | + | chr2_1:19705178-19705197 | Msa0200100:intron | 40.0% | |
| GAAACTAAGACCAAAGGAAC+TGG | + | chr2_1:19705184-19705203 | Msa0200100:intron | 40.0% | |
| TGCCAAAACATAACCCTCAA+TGG | - | chr2_1:19705221-19705240 | None:intergenic | 40.0% | |
| !! | TTCTAGCTCATACATGTGTG+TGG | + | chr2_1:19705349-19705368 | Msa0200100:intron | 40.0% |
| ! | TCTAGCTCATACATGTGTGT+GGG | + | chr2_1:19705350-19705369 | Msa0200100:intron | 40.0% |
| GGCAATTGGTACAGCAATAA+TGG | - | chr2_1:19705504-19705523 | None:intergenic | 40.0% | |
| ACAACATTTAACTACCACCG+GGG | - | chr2_1:19705603-19705622 | None:intergenic | 40.0% | |
| ! | TTACTAAGCACATGGCTTTG+AGG | + | chr2_1:19705698-19705717 | Msa0200100:intron | 40.0% |
| ! | TCTTCAAGGTGCCAACAATT+AGG | + | chr2_1:19705787-19705806 | Msa0200100:intron | 40.0% |
| TTGTTGCCATGCCTAATTGT+TGG | - | chr2_1:19705801-19705820 | None:intergenic | 40.0% | |
| GGCAACAAAACTCATACACA+CGG | + | chr2_1:19705813-19705832 | Msa0200100:intron | 40.0% | |
| GCAACAAAACTCATACACAC+GGG | + | chr2_1:19705814-19705833 | Msa0200100:intron | 40.0% | |
| TTGAGGAAGTTGAGTATGGA+TGG | - | chr2_1:19705842-19705861 | None:intergenic | 40.0% | |
| ! | AACATTGATAGCTTCCTCGA+TGG | - | chr2_1:19705866-19705885 | None:intergenic | 40.0% |
| !! | CAATCAAAGTCGGTTTTACC+TGG | + | chr2_1:19705967-19705986 | Msa0200100:intron | 40.0% |
| CACTCTGTGTTTCAAAAACC+AGG | - | chr2_1:19705988-19706007 | None:intergenic | 40.0% | |
| CAAATGCAGCTACCATTTCT+TGG | + | chr2_1:19706008-19706027 | Msa0200100:intron | 40.0% | |
| ATCTGCAAGGAAATGGAGAA+AGG | - | chr2_1:19706182-19706201 | None:intergenic | 40.0% | |
| CCATGGCAAAAAGGTAAGTA+GGG | - | chr2_1:19706391-19706410 | None:intergenic | 40.0% | |
| TCCATGGCAAAAAGGTAAGT+AGG | - | chr2_1:19706392-19706411 | None:intergenic | 40.0% | |
| ! | TACTTACCTTTTTGCCATGG+AGG | + | chr2_1:19706391-19706410 | Msa0200100:intron | 40.0% |
| AACAATGATGGCAGGTCTTT+AGG | + | chr2_1:19706524-19706543 | Msa0200100:intron | 40.0% | |
| AAGCCCATTAGAGCTAGATT+TGG | + | chr2_1:19706548-19706567 | Msa0200100:intron | 40.0% | |
| !! | CCTCCAAATCTAGCTCTAAT+GGG | - | chr2_1:19706554-19706573 | None:intergenic | 40.0% |
| GGTTTCTCAGGTTACATTGA+AGG | + | chr2_1:19706608-19706627 | Msa0200100:intron | 40.0% | |
| ! | TTGAGCTCCATGCTTTTCAT+CGG | + | chr2_1:19706651-19706670 | Msa0200100:intron | 40.0% |
| ! | TTTTCATCGGGGGTTGTTAT+TGG | + | chr2_1:19706664-19706683 | Msa0200100:intron | 40.0% |
| CTACGAGGATATCAACACAT+TGG | - | chr2_1:19706736-19706755 | None:intergenic | 40.0% | |
| GTGAACCATCATCAATGTCA+TGG | - | chr2_1:19706796-19706815 | None:intergenic | 40.0% | |
| CCATATGAGCTAAACTCATG+TGG | - | chr2_1:19707092-19707111 | None:intergenic | 40.0% | |
| ! | CCACATGAGTTTAGCTCATA+TGG | + | chr2_1:19707089-19707108 | Msa0200100:intron | 40.0% |
| GGTAAATTTCTCTAGCCACT+AGG | + | chr2_1:19707210-19707229 | Msa0200100:intron | 40.0% | |
| TCTAGCCACTAGGATGTTTA+AGG | + | chr2_1:19707220-19707239 | Msa0200100:intron | 40.0% | |
| GGTAAATTTCTCTAGCCACT+AGG | + | chr2_1:19707210-19707229 | Msa0200100:intron | 40.0% | |
| GGTAAATTTCTCTAGCCACT+AGG | + | chr2_1:19707210-19707229 | Msa0200100:intron | 40.0% | |
| TCTAGCCACTAGGATGTTTA+AGG | + | chr2_1:19707220-19707239 | Msa0200100:intron | 40.0% | |
| ATTCAGTATTCCTTGCAGTC+GGG | + | chr2_1:19707704-19707723 | Msa0200100:intron | 40.0% | |
| !! | AATTAAACGGTGCTGCATTG+TGG | - | chr2_1:19708130-19708149 | None:intergenic | 40.0% |
| GTATTTACATATAGGGACGG+AGG | - | chr2_1:19708239-19708258 | None:intergenic | 40.0% | |
| GAAGTGGTTATCCTAGAGTA+AGG | - | chr2_1:19709030-19709049 | None:intergenic | 40.0% | |
| ! | GCGGTTTATAGCAGTATTGA+GGG | - | chr2_1:19709836-19709855 | None:intergenic | 40.0% |
| TGCGGTTTATAGCAGTATTG+AGG | - | chr2_1:19709837-19709856 | None:intergenic | 40.0% | |
| TGATGAACATGTCTCAACTG+TGG | + | chr2_1:19704654-19704673 | Msa0200100:intron | 40.0% | |
| ! | AGAGCTTTGTAGAGTTTAGC+TGG | - | chr2_1:19704682-19704701 | None:intergenic | 40.0% |
| TGCTGATGAAATCATCCCAA+AGG | + | chr2_1:19704711-19704730 | Msa0200100:CDS | 40.0% | |
| ACTTGAACTCAAATCACACC+AGG | + | chr2_1:19710469-19710488 | Msa0200100:intron | 40.0% | |
| CTTGAACTCAAATCACACCA+GGG | + | chr2_1:19710470-19710489 | Msa0200100:intron | 40.0% | |
| CACGGTACATTGGAGTAAAA+AGG | - | chr2_1:19710830-19710849 | None:intergenic | 40.0% | |
| TCACTCAGCAAATGTTGTTG+TGG | + | chr2_1:19710885-19710904 | Msa0200100:intron | 40.0% | |
| AGTGATGGTTAAATGTCGCT+TGG | + | chr2_1:19710912-19710931 | Msa0200100:intron | 40.0% | |
| ! | GTGATGGTTAAATGTCGCTT+GGG | + | chr2_1:19710913-19710932 | Msa0200100:intron | 40.0% |
| ! | TGATGGTTAAATGTCGCTTG+GGG | + | chr2_1:19710914-19710933 | Msa0200100:intron | 40.0% |
| !! | AAATGTCGCTTGGGGTATTT+TGG | + | chr2_1:19710922-19710941 | Msa0200100:intron | 40.0% |
| ACCAACAATCAACTCTAGTC+CGG | - | chr2_1:19711061-19711080 | None:intergenic | 40.0% | |
| ! | AGAGCCTTGTAGAGTTTAGC+TGG | - | chr2_1:19700545-19700564 | None:intergenic | 45.0% |
| TGCTGATGAAATCGTCCCAA+AGG | + | chr2_1:19700574-19700593 | Msa0200100:CDS | 45.0% | |
| GAGTTGCATCACCTTTGGTA+TGG | - | chr2_1:19701434-19701453 | None:intergenic | 45.0% | |
| ! | TCTATCTGAAGCAGTACGTG+AGG | + | chr2_1:19701452-19701471 | Msa0200100:intron | 45.0% |
| TGGACTTATCAAGGCCATTG+AGG | + | chr2_1:19701494-19701513 | Msa0200100:intron | 45.0% | |
| GGACTTATCAAGGCCATTGA+GGG | + | chr2_1:19701495-19701514 | Msa0200100:intron | 45.0% | |
| ! | TTTGGCTCGTACATGTGTGT+TGG | + | chr2_1:19701646-19701665 | Msa0200100:intron | 45.0% |
| !! | TACATGTGTGTTGGCTTGGT+TGG | + | chr2_1:19701655-19701674 | Msa0200100:intron | 45.0% |
| CAACTCAAGTTCGGCTCATT+TGG | + | chr2_1:19701952-19701971 | Msa0200100:intron | 45.0% | |
| CGTTATATGATGCTTAGGCG+AGG | - | chr2_1:19702092-19702111 | None:intergenic | 45.0% | |
| ATGTTCCCCTTGCCTAAAGT+TGG | + | chr2_1:19702116-19702135 | Msa0200100:intron | 45.0% | |
| GATCACCAACTTTAGGCAAG+GGG | - | chr2_1:19702124-19702143 | None:intergenic | 45.0% | |
| GAGATCACCAACTTTAGGCA+AGG | - | chr2_1:19702126-19702145 | None:intergenic | 45.0% | |
| AGTGGAACTATCCAAACCTG+GGG | - | chr2_1:19702213-19702232 | None:intergenic | 45.0% | |
| CTAGTGGAACTATCCAAACC+TGG | - | chr2_1:19702215-19702234 | None:intergenic | 45.0% | |
| CAGGTTTGGATAGTTCCACT+AGG | + | chr2_1:19702213-19702232 | Msa0200100:intron | 45.0% | |
| GCCCTCACGAACATTTAAGT+AGG | - | chr2_1:19702356-19702375 | None:intergenic | 45.0% | |
| TTTCAGTCCTTGTTGGACAG+AGG | + | chr2_1:19702407-19702426 | Msa0200100:intron | 45.0% | |
| AGGTCTTAATGTCAAAGGCC+AGG | + | chr2_1:19702427-19702446 | Msa0200100:intron | 45.0% | |
| AATGTCAAAGGCCAGGAGAT+TGG | + | chr2_1:19702434-19702453 | Msa0200100:intron | 45.0% | |
| TTTCCAACTAGCCAATCTCC+TGG | - | chr2_1:19702448-19702467 | None:intergenic | 45.0% | |
| ! | AAACATGGGTAAGTTGGCCA+CGG | + | chr2_1:19702466-19702485 | Msa0200100:intron | 45.0% |
| CCACATGTCAGACCTATGAT+AGG | - | chr2_1:19702513-19702532 | None:intergenic | 45.0% | |
| CCTATCATAGGTCTGACATG+TGG | + | chr2_1:19702510-19702529 | Msa0200100:intron | 45.0% | |
| ATCATAGGTCTGACATGTGG+TGG | + | chr2_1:19702513-19702532 | Msa0200100:intron | 45.0% | |
| CTTGCAGTCTTCTTGATCTC+AGG | + | chr2_1:19702666-19702685 | Msa0200100:intron | 45.0% | |
| !!! | AGTTTTTGGCGACGTTGTCT+GGG | - | chr2_1:19702869-19702888 | None:intergenic | 45.0% |
| !!! | AAGTTTTTGGCGACGTTGTC+TGG | - | chr2_1:19702870-19702889 | None:intergenic | 45.0% |
| CAACCAAATCCAACTGCCTA+GGG | - | chr2_1:19703019-19703038 | None:intergenic | 45.0% | |
| GGTGAACATTGAGAGAGAAG+AGG | - | chr2_1:19703140-19703159 | None:intergenic | 45.0% | |
| TTTACTGCATCGTGGCACAT+TGG | - | chr2_1:19703742-19703761 | None:intergenic | 45.0% | |
| !! | GAAGGAGCATCAGAATCTAG+AGG | - | chr2_1:19703774-19703793 | None:intergenic | 45.0% |
| !! | ATTTTGGAAGCTTCGGCTAC+TGG | - | chr2_1:19703836-19703855 | None:intergenic | 45.0% |
| GTGTAGACGGGATTCAAACT+TGG | - | chr2_1:19704257-19704276 | None:intergenic | 45.0% | |
| TCCATGACTCAGTGTGTAGA+CGG | - | chr2_1:19704270-19704289 | None:intergenic | 45.0% | |
| GTTAATGACATGGTGAGGAG+TGG | - | chr2_1:19704518-19704537 | None:intergenic | 45.0% | |
| TACAGCATAGTAGGAGGAAC+AGG | + | chr2_1:19705028-19705047 | Msa0200100:CDS | 45.0% | |
| ACAGCATAGTAGGAGGAACA+GGG | + | chr2_1:19705029-19705048 | Msa0200100:CDS | 45.0% | |
| ATTGTTGCTGGATCTGATGG+TGG | + | chr2_1:19705091-19705110 | Msa0200100:CDS | 45.0% | |
| CTTGATAAGCCCAGTTCCTT+TGG | - | chr2_1:19705197-19705216 | None:intergenic | 45.0% | |
| CAAAGGAACTGGGCTTATCA+AGG | + | chr2_1:19705195-19705214 | Msa0200100:intron | 45.0% | |
| ! | GGCCATTGAGGGTTATGTTT+TGG | + | chr2_1:19705216-19705235 | Msa0200100:intron | 45.0% |
| TTCTCTCCTAAACTCAACCC+CGG | + | chr2_1:19705583-19705602 | Msa0200100:intron | 45.0% | |
| CTCTAGCCATTCAAATGTCG+AGG | - | chr2_1:19705727-19705746 | None:intergenic | 45.0% | |
| ! | AAGGTGCCAACAATTAGGCA+TGG | + | chr2_1:19705792-19705811 | Msa0200100:intron | 45.0% |
| TGGCTTGAGGAAGTTGAGTA+TGG | - | chr2_1:19705846-19705865 | None:intergenic | 45.0% | |
| TGGAGTTGTCCGACCAAAAA+AGG | - | chr2_1:19705935-19705954 | None:intergenic | 45.0% | |
| TTTGGTCGGACAACTCCAAT+TGG | + | chr2_1:19705937-19705956 | Msa0200100:intron | 45.0% | |
| ! | CACTTGTTGATCTTCCTTCG+AGG | + | chr2_1:19706153-19706172 | Msa0200100:intron | 45.0% |
| ATGGAGAAAGGTTTCCTCGA+AGG | - | chr2_1:19706170-19706189 | None:intergenic | 45.0% | |
| AACATCTTCGCCATTGGTGT+AGG | + | chr2_1:19706317-19706336 | Msa0200100:intron | 45.0% | |
| ACATCTTCGCCATTGGTGTA+GGG | + | chr2_1:19706318-19706337 | Msa0200100:intron | 45.0% | |
| ! | CCCTACTTACCTTTTTGCCA+TGG | + | chr2_1:19706388-19706407 | Msa0200100:intron | 45.0% |
| TATGAGCCTCCATGGCAAAA+AGG | - | chr2_1:19706400-19706419 | None:intergenic | 45.0% | |
| CCCATTAGAGCTAGATTTGG+AGG | + | chr2_1:19706551-19706570 | Msa0200100:intron | 45.0% | |
| !! | GCCTCCAAATCTAGCTCTAA+TGG | - | chr2_1:19706555-19706574 | None:intergenic | 45.0% |
| CTGAAACCCAAGGTCTAGAA+GGG | - | chr2_1:19706589-19706608 | None:intergenic | 45.0% | |
| ! | GAAAAGCATGGAGCTCAACA+TGG | - | chr2_1:19706649-19706668 | None:intergenic | 45.0% |
| ! | TGAGCTCCATGCTTTTCATC+GGG | + | chr2_1:19706652-19706671 | Msa0200100:intron | 45.0% |
| CGAGGATATCAACACATTGG+AGG | - | chr2_1:19706733-19706752 | None:intergenic | 45.0% | |
| TTCACACATCTCAGACTCTG+CGG | + | chr2_1:19706811-19706830 | Msa0200100:intron | 45.0% | |
| TATACAATATGTGCAGGGGC+CGG | + | chr2_1:19707122-19707141 | Msa0200100:intron | 45.0% | |
| ! | ACATGAATAAGTGGGGTGTC+CGG | - | chr2_1:19707158-19707177 | None:intergenic | 45.0% |
| TTCCTTGCAGTCGGGTAATT+TGG | + | chr2_1:19707712-19707731 | Msa0200100:intron | 45.0% | |
| GCTTTGGCTGATGAAGAGAT+GGG | - | chr2_1:19707906-19707925 | None:intergenic | 45.0% | |
| ! | AGCTTTGGCTGATGAAGAGA+TGG | - | chr2_1:19707907-19707926 | None:intergenic | 45.0% |
| GGTTTACTTATAGGGACGGA+GGG | + | chr2_1:19708491-19708510 | Msa0200100:intron | 45.0% | |
| ACTTTCTTCGCAAGAGGTAG+AGG | + | chr2_1:19709500-19709519 | Msa0200100:intron | 45.0% | |
| GAAGATCCAACTACTTGTGG+CGG | + | chr2_1:19710499-19710518 | Msa0200100:intron | 45.0% | |
| AGTTAACCGCCACAAGTAGT+TGG | - | chr2_1:19710508-19710527 | None:intergenic | 45.0% | |
| CTTGTGGCGGTTAACTAGAA+AGG | + | chr2_1:19710512-19710531 | Msa0200100:intron | 45.0% | |
| TGTTGTTGTGGAGTGAGTGA+TGG | + | chr2_1:19710897-19710916 | Msa0200100:intron | 45.0% | |
| ! | TCCGGACTAGAGTTGATTGT+TGG | + | chr2_1:19711057-19711076 | Msa0200100:intron | 45.0% |
| !!! | AATTAAAAACTAAAAATTTT+AGG | + | chr2_1:19704085-19704104 | Msa0200100:intron | 5.0% |
| !!! | TATTTTTTTAAAAACTTTAA+TGG | - | chr2_1:19707010-19707029 | None:intergenic | 5.0% |
| !! | AATTAATGATAAAAAAATAT+AGG | - | chr2_1:19708990-19709009 | None:intergenic | 5.0% |
| !!! | TTTTACTATTTTATTTTTAA+TGG | - | chr2_1:19709266-19709285 | None:intergenic | 5.0% |
| !!! | TATTTTGATATTTATTTATT+GGG | - | chr2_1:19709758-19709777 | None:intergenic | 5.0% |
| !!! | TTATTTTGATATTTATTTAT+TGG | - | chr2_1:19709759-19709778 | None:intergenic | 5.0% |
| !! | ATAAATAAATAATAAATAAC+GGG | + | chr2_1:19710364-19710383 | Msa0200100:intron | 5.0% |
| !!! | TTAAATTTTATTTACATTTA+AGG | + | chr2_1:19711162-19711181 | Msa0200100:intron | 5.0% |
| TGACGAACATGTCTCAACCG+TGG | + | chr2_1:19700517-19700536 | Msa0200100:CDS | 50.0% | |
| GTAGAGTTTAGCTGGAGCCA+CGG | - | chr2_1:19700537-19700556 | None:intergenic | 50.0% | |
| GGCTCCAGCTAAACTCTACA+AGG | + | chr2_1:19700538-19700557 | Msa0200100:CDS | 50.0% | |
| GGGCAGCAGAAATCACCTTT+GGG | - | chr2_1:19700592-19700611 | None:intergenic | 50.0% | |
| TGGGCAGCAGAAATCACCTT+TGG | - | chr2_1:19700593-19700612 | None:intergenic | 50.0% | |
| GTTGAAGGAAATGGAGGACC+CGG | + | chr2_1:19700626-19700645 | Msa0200100:CDS | 50.0% | |
| GCAGTGGATGAGGCAAACTT+TGG | + | chr2_1:19701288-19701307 | Msa0200100:CDS | 50.0% | |
| TACAGCTTAGTGGGAGGAAC+AGG | + | chr2_1:19701318-19701337 | Msa0200100:CDS | 50.0% | |
| ACAGCTTAGTGGGAGGAACA+GGG | + | chr2_1:19701319-19701338 | Msa0200100:CDS | 50.0% | |
| !! | ATTGTTGCTGGCTCTGATGG+TGG | + | chr2_1:19701381-19701400 | Msa0200100:CDS | 50.0% |
| AGCAGTACGTGAGGAGACTA+AGG | + | chr2_1:19701461-19701480 | Msa0200100:intron | 50.0% | |
| GAGACTAAGGCCAAAGGAAC+TGG | + | chr2_1:19701474-19701493 | Msa0200100:intron | 50.0% | |
| !! | CTCGTACATGTGTGTTGGCT+TGG | + | chr2_1:19701651-19701670 | Msa0200100:intron | 50.0% |
| !! | TGGCTTGGTTGGATGTTGTG+AGG | + | chr2_1:19701666-19701685 | Msa0200100:intron | 50.0% |
| ! | GTTCAAGTTCACCCCAGGTT+TGG | + | chr2_1:19702199-19702218 | Msa0200100:intron | 50.0% |
| ! | TTTGGGTTAACAGCCAACCG+TGG | - | chr2_1:19702486-19702505 | None:intergenic | 50.0% |
| ATAGGTCTGACATGTGGTGG+TGG | + | chr2_1:19702516-19702535 | Msa0200100:intron | 50.0% | |
| ATGCGAGGTATAGTGCAACC+CGG | - | chr2_1:19702708-19702727 | None:intergenic | 50.0% | |
| ! | CGTACTGTGCAGTGCTACTA+AGG | - | chr2_1:19702747-19702766 | None:intergenic | 50.0% |
| TTGCCCTAGGCAGTTGGATT+TGG | + | chr2_1:19703013-19703032 | Msa0200100:intron | 50.0% | |
| GCAACCAAATCCAACTGCCT+AGG | - | chr2_1:19703020-19703039 | None:intergenic | 50.0% | |
| AGACGATTTCAGGGCATAGG+AGG | - | chr2_1:19703636-19703655 | None:intergenic | 50.0% | |
| GGAACAGTAACGAGGCACAT+TGG | - | chr2_1:19703721-19703740 | None:intergenic | 50.0% | |
| GGCACATTGGAACAGTAACG+AGG | - | chr2_1:19703729-19703748 | None:intergenic | 50.0% | |
| CTACTGGAAAAACCGTGCCA+CGG | - | chr2_1:19703820-19703839 | None:intergenic | 50.0% | |
| CCATGACTCAGTGTGTAGAC+GGG | - | chr2_1:19704269-19704288 | None:intergenic | 50.0% | |
| ATTTCAACACTCTGGGCAGC+TGG | - | chr2_1:19704742-19704761 | None:intergenic | 50.0% | |
| GTTGAAGGAAATGGAGGACC+TGG | + | chr2_1:19700626-19700645 | Msa0200100:CDS | 50.0% | |
| AGCAGTGGATGAGGCAAACT+TGG | + | chr2_1:19704997-19705016 | Msa0200100:CDS | 50.0% | |
| GCAGTGGATGAGGCAAACTT+GGG | + | chr2_1:19701288-19701307 | Msa0200100:CDS | 50.0% | |
| CATAGTAGGAGGAACAGGGT+TGG | + | chr2_1:19705033-19705052 | Msa0200100:CDS | 50.0% | |
| GAACTGCATCACCTTTGGTG+TGG | - | chr2_1:19705144-19705163 | None:intergenic | 50.0% | |
| TGGGCTTATCAAGGCCATTG+AGG | + | chr2_1:19705204-19705223 | Msa0200100:intron | 50.0% | |
| GGGCTTATCAAGGCCATTGA+GGG | + | chr2_1:19705205-19705224 | Msa0200100:intron | 50.0% | |
| !! | CTAAGCACATGGCTTTGAGG+TGG | + | chr2_1:19705701-19705720 | Msa0200100:intron | 50.0% |
| AGGTGGCCTCGACATTTGAA+TGG | + | chr2_1:19705718-19705737 | Msa0200100:intron | 50.0% | |
| TCAACTTCCTCAAGCCATCG+AGG | + | chr2_1:19705849-19705868 | Msa0200100:intron | 50.0% | |
| ATAGCTTCCTCGATGGCTTG+AGG | - | chr2_1:19705859-19705878 | None:intergenic | 50.0% | |
| TCTGTCACCCTTCTAGACCT+TGG | + | chr2_1:19706579-19706598 | Msa0200100:intron | 50.0% | |
| CTGTCACCCTTCTAGACCTT+GGG | + | chr2_1:19706580-19706599 | Msa0200100:intron | 50.0% | |
| CCTGAAACCCAAGGTCTAGA+AGG | - | chr2_1:19706590-19706609 | None:intergenic | 50.0% | |
| CCTTCTAGACCTTGGGTTTC+AGG | + | chr2_1:19706587-19706606 | Msa0200100:intron | 50.0% | |
| CCTGAGAAACCTGAAACCCA+AGG | - | chr2_1:19706599-19706618 | None:intergenic | 50.0% | |
| !! | CCTTGGGTTTCAGGTTTCTC+AGG | + | chr2_1:19706596-19706615 | Msa0200100:intron | 50.0% |
| AAGCATGGAGCTCAACATGG+AGG | - | chr2_1:19706646-19706665 | None:intergenic | 50.0% | |
| ! | GAGCTCCATGCTTTTCATCG+GGG | + | chr2_1:19706653-19706672 | Msa0200100:intron | 50.0% |
| ! | AGCTCCATGCTTTTCATCGG+GGG | + | chr2_1:19706654-19706673 | Msa0200100:intron | 50.0% |
| ACAACCCCCGATGAAAAGCA+TGG | - | chr2_1:19706661-19706680 | None:intergenic | 50.0% | |
| ATACAATATGTGCAGGGGCC+GGG | + | chr2_1:19707123-19707142 | Msa0200100:intron | 50.0% | |
| ! | ATGAATAAGTGGGGTGTCCG+GGG | - | chr2_1:19707156-19707175 | None:intergenic | 50.0% |
| ! | CATGAATAAGTGGGGTGTCC+GGG | - | chr2_1:19707157-19707176 | None:intergenic | 50.0% |
| TGCCAAATTACCCGACTGCA+AGG | - | chr2_1:19707717-19707736 | None:intergenic | 50.0% | |
| GGGTTTACTTATAGGGACGG+AGG | + | chr2_1:19708490-19708509 | Msa0200100:intron | 50.0% | |
| TCCTGGACTTTCTTCGCAAG+AGG | + | chr2_1:19709494-19709513 | Msa0200100:intron | 50.0% | |
| ACCTCTTGCGAAGAAAGTCC+AGG | - | chr2_1:19709498-19709517 | None:intergenic | 50.0% | |
| ATTTCAACACTCTGGGCAGC+TGG | - | chr2_1:19704742-19704761 | None:intergenic | 50.0% | |
| !! | GTTGAAGGAAATGGTGGACC+AGG | + | chr2_1:19710076-19710095 | Msa0200100:CDS | 50.0% |
| TTCACTGGTGCTTGCTCTTG+TGG | + | chr2_1:19710552-19710571 | Msa0200100:intron | 50.0% | |
| CTTAGTGGGAGGAACAGGGT+TGG | + | chr2_1:19701323-19701342 | Msa0200100:CDS | 55.0% | |
| CGTGAGGAGACTAAGGCCAA+AGG | + | chr2_1:19701468-19701487 | Msa0200100:intron | 55.0% | |
| TCATTGCCAGCGCTATGTGC+AGG | + | chr2_1:19702042-19702061 | Msa0200100:intron | 55.0% | |
| TAACCAGTCTTTCGCCCTCC+TGG | + | chr2_1:19702245-19702264 | Msa0200100:intron | 55.0% | |
| TAACCAGGAGGGCGAAAGAC+TGG | - | chr2_1:19702251-19702270 | None:intergenic | 55.0% | |
| GTCTTTCGCCCTCCTGGTTA+AGG | + | chr2_1:19702251-19702270 | Msa0200100:intron | 55.0% | |
| ! | AGGCCAGGAGATTGGCTAGT+TGG | + | chr2_1:19702442-19702461 | Msa0200100:intron | 55.0% |
| ! | ATGGGTAAGTTGGCCACGGT+TGG | + | chr2_1:19702470-19702489 | Msa0200100:intron | 55.0% |
| AGGATCGTGCAACAAGTCCC+CGG | + | chr2_1:19702686-19702705 | Msa0200100:intron | 55.0% | |
| TGCGAGGTATAGTGCAACCC+GGG | - | chr2_1:19702707-19702726 | None:intergenic | 55.0% | |
| TTAGGGTTGCCCTAGGCAGT+TGG | + | chr2_1:19703007-19703026 | Msa0200100:intron | 55.0% | |
| GATACATGTCCACCGTGGCA+CGG | + | chr2_1:19703805-19703824 | Msa0200100:intron | 55.0% | |
| CCCGTCTACACACTGAGTCA+TGG | + | chr2_1:19704266-19704285 | Msa0200100:intron | 55.0% | |
| GGGCAGCTGGAATCACCTTT+GGG | - | chr2_1:19704729-19704748 | None:intergenic | 55.0% | |
| TGGGCAGCTGGAATCACCTT+TGG | - | chr2_1:19704730-19704749 | None:intergenic | 55.0% | |
| TCTCCTAAACTCAACCCCGG+TGG | + | chr2_1:19705586-19705605 | Msa0200100:intron | 55.0% | |
| CTACCACCGGGGTTGAGTTT+AGG | - | chr2_1:19705592-19705611 | None:intergenic | 55.0% | |
| TCTTCGCCATTGGTGTAGGG+TGG | + | chr2_1:19706321-19706340 | Msa0200100:intron | 55.0% | |
| AGACGACCACCCTACACCAA+TGG | - | chr2_1:19706330-19706349 | None:intergenic | 55.0% | |
| ! | TCGGGGGTTGTTATTGGCCA+AGG | + | chr2_1:19706670-19706689 | Msa0200100:intron | 55.0% |
| TACAATATGTGCAGGGGCCG+GGG | + | chr2_1:19707124-19707143 | Msa0200100:intron | 55.0% | |
| TGCGTGGCTCTCCTTACTCT+AGG | + | chr2_1:19709016-19709035 | Msa0200100:intron | 55.0% | |
| GGGCAGCTGGAATCACCTTT+GGG | - | chr2_1:19704729-19704748 | None:intergenic | 55.0% | |
| TGGGCAGCTGGAATCACCTT+TGG | - | chr2_1:19704730-19704749 | None:intergenic | 55.0% | |
| GACAGCGCTAACTACCGTGA+AGG | - | chr2_1:19710867-19710886 | None:intergenic | 55.0% | |
| TGCCACGACGTAGCCCTCAA+TGG | - | chr2_1:19701511-19701530 | None:intergenic | 60.0% | |
| TGGTGTCCTGCACATAGCGC+TGG | - | chr2_1:19702051-19702070 | None:intergenic | 60.0% | |
| !! | GGTCTGACATGTGGTGGTGG+TGG | + | chr2_1:19702519-19702538 | Msa0200100:intron | 60.0% |
| !! | CTGACATGTGGTGGTGGTGG+TGG | + | chr2_1:19702522-19702541 | Msa0200100:intron | 60.0% |
| !! | ACATGTGGTGGTGGTGGTGG+TGG | + | chr2_1:19702525-19702544 | Msa0200100:intron | 60.0% |
| !! | CATGTGGTGGTGGTGGTGGT+GGG | + | chr2_1:19702526-19702545 | Msa0200100:intron | 60.0% |
| GGATCGTGCAACAAGTCCCC+GGG | + | chr2_1:19702687-19702706 | Msa0200100:intron | 60.0% | |
| GCGAGGTATAGTGCAACCCG+GGG | - | chr2_1:19702706-19702725 | None:intergenic | 60.0% | |
| GCCACGATACATGTCCACCG+TGG | + | chr2_1:19703800-19703819 | Msa0200100:intron | 60.0% | |
| GCCACGGTGGACATGTATCG+TGG | - | chr2_1:19703804-19703823 | None:intergenic | 60.0% | |
| CTGGAAAAACCGTGCCACGG+TGG | - | chr2_1:19703817-19703836 | None:intergenic | 60.0% | |
| GGCCATTGAGGGCTACGTCG+TGG | + | chr2_1:19701506-19701525 | Msa0200100:intron | 65.0% | |
| GGTGTCCGGGGTTCGAACCC+CGG | - | chr2_1:19707144-19707163 | None:intergenic | 70.0% | |
| AGGGGCCGGGGTTCGAACCC+CGG | + | chr2_1:19707136-19707155 | Msa0200100:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 19700497 | 19711209 | 19700497 | ID=Msa0200100;Name=Msa0200100 |
| chr2_1 | mRNA | 19700497 | 19711209 | 19700497 | ID=Msa0200100-mRNA-1;Parent=Msa0200100;Name=Msa0200100-mRNA-1;_AED=0.42;_eAED=0.44;_QI=0|0|0|1|0.4|0.16|6|0|300 |
| chr2_1 | exon | 19700497 | 19700677 | 19700497 | ID=Msa0200100-mRNA-1:exon:8202;Parent=Msa0200100-mRNA-1 |
| chr2_1 | exon | 19701253 | 19701468 | 19701253 | ID=Msa0200100-mRNA-1:exon:8203;Parent=Msa0200100-mRNA-1 |
| chr2_1 | exon | 19704683 | 19704814 | 19704683 | ID=Msa0200100-mRNA-1:exon:8204;Parent=Msa0200100-mRNA-1 |
| chr2_1 | exon | 19704963 | 19705178 | 19704963 | ID=Msa0200100-mRNA-1:exon:8205;Parent=Msa0200100-mRNA-1 |
| chr2_1 | exon | 19709996 | 19710127 | 19709996 | ID=Msa0200100-mRNA-1:exon:8206;Parent=Msa0200100-mRNA-1 |
| chr2_1 | exon | 19711184 | 19711209 | 19711184 | ID=Msa0200100-mRNA-1:exon:8207;Parent=Msa0200100-mRNA-1 |
| chr2_1 | CDS | 19700497 | 19700677 | 19700497 | ID=Msa0200100-mRNA-1:cds;Parent=Msa0200100-mRNA-1 |
| chr2_1 | CDS | 19701253 | 19701468 | 19701253 | ID=Msa0200100-mRNA-1:cds;Parent=Msa0200100-mRNA-1 |
| chr2_1 | CDS | 19704683 | 19704814 | 19704683 | ID=Msa0200100-mRNA-1:cds;Parent=Msa0200100-mRNA-1 |
| chr2_1 | CDS | 19704963 | 19705178 | 19704963 | ID=Msa0200100-mRNA-1:cds;Parent=Msa0200100-mRNA-1 |
| chr2_1 | CDS | 19709996 | 19710127 | 19709996 | ID=Msa0200100-mRNA-1:cds;Parent=Msa0200100-mRNA-1 |
| chr2_1 | CDS | 19711184 | 19711209 | 19711184 | ID=Msa0200100-mRNA-1:cds;Parent=Msa0200100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
