AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1060900


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1060900 MtrunA17_Chr7g0238581 91.265 664 31 1 1 664 1 637 0.0 1239
Msa1060900 MtrunA17_Chr6g0470541 36.300 427 221 12 25 450 5 381 1.29e-65 232
Msa1060900 MtrunA17_Chr6g0470541 42.857 105 54 2 554 656 800 900 4.87e-17 85.5
Msa1060900 MtrunA17_Chr3g0132921 31.643 414 202 11 19 396 3 371 3.66e-52 188
Msa1060900 MtrunA17_Chr3g0134191 31.579 399 187 13 26 380 9 365 8.89e-48 181
Msa1060900 MtrunA17_Chr5g0427481 31.472 394 193 10 19 380 11 359 9.66e-48 181
Msa1060900 MtrunA17_Chr1g0182151 31.061 396 208 13 13 380 41 399 2.69e-47 180
Msa1060900 MtrunA17_Chr1g0153061 31.172 401 186 12 26 380 9 365 1.13e-46 178
Msa1060900 MtrunA17_Chr1g0178411 30.155 388 199 10 26 380 14 362 5.35e-45 173
Msa1060900 MtrunA17_Chr7g0266631 29.948 384 205 9 26 380 10 358 6.72e-45 172
Msa1060900 MtrunA17_Chr2g0327581 30.607 379 204 10 26 380 50 393 2.09e-44 171
Msa1060900 MtrunA17_Chr4g0053211 30.198 404 190 11 26 380 13 373 1.18e-43 169
Msa1060900 MtrunA17_Chr2g0307481 31.951 410 226 14 6 396 41 416 3.05e-42 162
Msa1060900 MtrunA17_Chr4g0062291 34.677 372 186 16 24 376 122 455 1.42e-40 158
Msa1060900 MtrunA17_Chr2g0331761 31.622 370 199 15 22 379 182 509 1.59e-40 158
Msa1060900 MtrunA17_Chr6g0485471 32.432 370 194 15 23 379 113 439 7.86e-40 155
Msa1060900 MtrunA17_Chr1g0191181 29.949 394 216 10 26 402 89 439 1.19e-38 151
Msa1060900 MtrunA17_Chr5g0411971 31.025 361 202 10 26 378 400 721 5.96e-38 151
Msa1060900 MtrunA17_Chr8g0369881 30.685 365 203 9 25 380 875 1198 6.30e-38 151
Msa1060900 MtrunA17_Chr4g0067421 29.870 385 209 13 16 379 196 540 7.47e-38 150
Msa1060900 MtrunA17_Chr5g0421591 30.748 361 203 10 26 378 375 696 1.58e-37 150
Msa1060900 MtrunA17_Chr5g0421521 30.100 402 227 14 26 418 375 731 2.94e-37 149
Msa1060900 MtrunA17_Chr5g0407791 31.165 369 196 10 25 380 889 1212 5.97e-37 148
Msa1060900 MtrunA17_Chr3g0142261 31.117 376 206 10 17 379 8 343 6.20e-37 148
Msa1060900 MtrunA17_Chr2g0295881 29.323 399 208 14 23 387 195 553 1.07e-36 147
Msa1060900 MtrunA17_Chr5g0398521 29.381 388 204 10 25 382 57 404 1.99e-36 146
Msa1060900 MtrunA17_Chr1g0152231 28.947 380 207 9 23 382 1 337 6.63e-36 144
Msa1060900 MtrunA17_Chr7g0245931 29.365 378 216 11 25 382 52 398 7.32e-36 144
Msa1060900 MtrunA17_Chr3g0145071 27.649 387 215 10 8 382 87 420 8.90e-36 144
Msa1060900 MtrunA17_Chr4g0035661 28.986 345 197 9 53 382 99 410 9.60e-36 144
Msa1060900 MtrunA17_Chr4g0049011 29.787 376 196 11 26 374 280 614 1.15e-35 142
Msa1060900 MtrunA17_Chr3g0122121 28.351 388 205 9 22 380 95 438 3.78e-35 143
Msa1060900 MtrunA17_Chr7g0272871 31.099 373 207 12 17 378 118 451 4.12e-35 142
Msa1060900 MtrunA17_Chr7g0258991 29.444 360 208 10 34 378 64 392 4.41e-35 142
Msa1060900 MtrunA17_Chr2g0312631 30.959 365 200 10 26 378 385 709 1.52e-34 140
Msa1060900 MtrunA17_Chr1g0191851 31.405 363 200 11 26 378 148 471 4.30e-34 139
Msa1060900 MtrunA17_Chr5g0405181 27.749 382 205 10 25 390 20 346 3.50e-33 136
Msa1060900 MtrunA17_Chr4g0045381 29.551 379 203 9 26 380 194 532 5.83e-33 136
Msa1060900 MtrunA17_Chr4g0036001 28.533 368 206 10 25 379 24 347 1.09e-32 135
Msa1060900 MtrunA17_Chr8g0377731 27.885 416 214 12 5 380 23 392 1.68e-32 134
Msa1060900 MtrunA17_Chr8g0372171 28.186 408 233 12 25 417 19 381 2.49e-32 134
Msa1060900 MtrunA17_Chr7g0271961 30.769 364 191 13 26 374 402 719 3.23e-32 133
Msa1060900 MtrunA17_Chr2g0322291 28.571 385 199 11 26 380 89 427 5.03e-32 133
Msa1060900 MtrunA17_Chr4g0042061 29.759 373 201 10 26 374 433 768 5.57e-32 132
Msa1060900 MtrunA17_Chr4g0069141 28.496 379 207 10 26 380 154 492 1.18e-31 132
Msa1060900 MtrunA17_Chr2g0280421 30.027 373 207 11 26 383 438 771 1.68e-31 130
Msa1060900 MtrunA17_Chr1g0193221 28.080 349 200 10 79 404 39 359 1.91e-31 131
Msa1060900 MtrunA17_Chr1g0195111 29.255 376 193 12 26 373 397 727 2.64e-30 127
Msa1060900 MtrunA17_Chr6g0483701 30.541 370 198 12 25 380 30 354 7.77e-30 126
Msa1060900 MtrunA17_Chr3g0102921 31.117 376 192 13 26 374 439 774 9.66e-30 126
Msa1060900 MtrunA17_Chr1g0192481 29.560 318 181 7 93 397 115 402 4.26e-29 122
Msa1060900 MtrunA17_Chr5g0447041 29.310 406 189 13 26 374 435 799 5.06e-29 124
Msa1060900 MtrunA17_Chr2g0319271 28.030 396 215 11 26 388 400 758 7.40e-29 122
Msa1060900 MtrunA17_Chr4g0070001 28.378 370 210 11 21 380 139 463 1.62e-28 122
Msa1060900 MtrunA17_Chr7g0257301 29.306 389 193 13 26 374 393 739 6.34e-26 114
Msa1060900 MtrunA17_Chr8g0386891 40.678 177 75 4 200 374 4 152 3.12e-25 108
Msa1060900 MtrunA17_Chr3g0101021 25.307 407 233 13 6 380 43 410 2.28e-24 108
Msa1060900 MtrunA17_Chr5g0445211 27.119 413 211 16 3 380 54 411 1.36e-22 103
Msa1060900 MtrunA17_Chr1g0187411 24.029 412 212 13 5 378 120 468 6.55e-22 100
Msa1060900 MtrunA17_Chr8g0367581 26.519 362 207 15 26 377 147 459 4.79e-19 92.4
Msa1060900 MtrunA17_Chr6g0484501 34.831 178 86 3 199 374 33 182 1.43e-16 79.7
Msa1060900 MtrunA17_Chr8g0390991 35.955 178 84 4 199 374 3 152 3.88e-16 82.0
Msa1060900 MtrunA17_Chr7g0269681 33.862 189 86 5 196 373 37 197 4.92e-16 81.3
Msa1060900 MtrunA17_Chr3g0142841 25.796 314 173 12 94 383 157 434 5.13e-16 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1060900 AT5G02370.1 53.377 607 224 13 8 601 4 564 0.0 563
Msa1060900 AT5G23910.1 38.127 299 147 8 77 374 53 314 2.58e-52 192
Msa1060900 AT5G23910.1 52.381 84 40 0 572 655 618 701 5.28e-19 92.0
Msa1060900 AT5G23910.2 38.127 299 147 8 77 374 57 318 2.60e-52 192
Msa1060900 AT5G23910.2 52.381 84 40 0 572 655 622 705 5.55e-19 92.0
Msa1060900 AT5G47820.2 30.714 420 193 14 9 380 3 372 2.33e-48 183
Msa1060900 AT5G47820.1 30.714 420 193 14 9 380 3 372 2.33e-48 183
Msa1060900 AT5G60930.2 30.905 398 190 10 26 380 7 362 2.58e-48 184
Msa1060900 AT3G50240.2 31.081 444 202 14 26 415 26 419 2.62e-48 183
Msa1060900 AT5G60930.3 30.905 398 190 10 26 380 7 362 2.63e-48 184
Msa1060900 AT5G60930.1 30.905 398 190 10 26 380 7 362 3.30e-48 183
Msa1060900 AT3G50240.1 31.081 444 202 14 26 415 26 419 5.60e-48 182
Msa1060900 AT3G50240.4 31.081 444 202 14 26 415 26 419 5.81e-48 182
Msa1060900 AT2G28620.1 31.078 399 202 12 16 380 35 394 4.96e-47 179
Msa1060900 AT2G28620.3 31.078 399 202 12 16 380 35 394 5.59e-47 179
Msa1060900 AT2G28620.2 31.078 399 202 12 16 380 35 394 5.59e-47 179
Msa1060900 AT3G49650.1 34.332 367 195 9 28 382 17 349 3.44e-45 173
Msa1060900 AT3G45850.2 29.765 383 202 10 26 380 56 399 7.43e-45 173
Msa1060900 AT3G45850.1 29.765 383 202 10 26 380 56 399 7.43e-45 173
Msa1060900 AT2G37420.1 30.491 387 210 11 26 388 49 400 2.14e-43 168
Msa1060900 AT2G37420.2 30.491 387 210 11 26 388 49 400 2.14e-43 168
Msa1060900 AT2G36200.1 29.639 388 201 9 26 380 13 361 4.46e-43 167
Msa1060900 AT2G36200.2 29.639 388 201 9 26 380 13 361 8.54e-43 166
Msa1060900 AT3G16060.1 31.989 372 195 16 22 379 166 493 1.89e-42 164
Msa1060900 AT1G18550.1 33.512 373 192 13 22 376 148 482 2.21e-41 161
Msa1060900 AT1G12430.2 30.414 411 217 11 25 406 70 440 4.08e-41 161
Msa1060900 AT1G12430.1 30.414 411 217 11 25 406 70 440 4.26e-41 161
Msa1060900 AT2G22610.1 30.824 425 234 16 7 418 397 774 3.02e-40 159
Msa1060900 AT2G22610.3 30.824 425 234 16 7 418 398 775 3.05e-40 159
Msa1060900 AT2G22610.2 30.824 425 234 16 7 418 397 774 4.33e-40 158
Msa1060900 AT3G63480.2 30.513 390 212 10 23 391 1 352 7.14e-40 153
Msa1060900 AT5G27950.1 32.880 368 189 12 26 378 80 404 6.11e-39 152
Msa1060900 AT5G65930.1 28.788 396 227 11 25 410 887 1237 2.00e-38 153
Msa1060900 AT5G65930.2 28.788 396 227 11 25 410 888 1238 2.17e-38 153
Msa1060900 AT5G65930.3 28.788 396 227 11 25 410 894 1244 2.62e-38 153
Msa1060900 AT3G16630.2 30.649 385 211 14 12 379 182 527 3.05e-38 152
Msa1060900 AT3G16630.1 30.649 385 211 14 12 379 182 527 3.05e-38 152
Msa1060900 AT3G63480.1 30.203 394 212 11 23 391 1 356 1.09e-37 147
Msa1060900 AT1G55550.1 30.874 366 194 12 26 378 92 411 1.63e-37 150
Msa1060900 AT4G39050.1 28.804 368 202 9 26 381 99 418 1.82e-37 150
Msa1060900 AT5G06670.5 27.937 383 207 11 11 378 57 385 4.27e-37 148
Msa1060900 AT5G06670.8 27.937 383 207 11 11 378 57 385 4.52e-37 148
Msa1060900 AT5G06670.4 27.937 383 207 11 11 378 57 385 4.52e-37 148
Msa1060900 AT5G06670.7 27.937 383 207 11 11 378 57 385 4.52e-37 148
Msa1060900 AT5G06670.2 27.937 383 207 11 11 378 57 385 4.96e-37 149
Msa1060900 AT5G06670.3 27.937 383 207 11 11 378 57 385 4.96e-37 149
Msa1060900 AT1G01950.3 30.469 384 204 12 25 382 60 406 1.05e-36 147
Msa1060900 AT5G41310.1 31.492 362 179 12 26 374 423 728 1.11e-36 147
Msa1060900 AT1G18410.3 34.948 289 147 8 99 374 553 813 1.11e-36 148
Msa1060900 AT1G18410.2 34.948 289 147 8 99 374 553 813 1.11e-36 148
Msa1060900 AT1G01950.1 30.469 384 204 12 25 382 60 406 1.19e-36 147
Msa1060900 AT1G18410.5 35.664 286 141 8 99 374 543 795 1.22e-36 147
Msa1060900 AT1G01950.2 30.469 384 204 12 25 382 60 406 1.24e-36 147
Msa1060900 AT1G18410.4 34.948 289 147 8 99 374 696 956 2.27e-36 147
Msa1060900 AT1G18410.1 35.664 286 141 8 99 374 696 948 2.66e-36 147
Msa1060900 AT1G59540.1 29.459 370 206 11 23 380 1 327 5.14e-36 145
Msa1060900 AT1G21730.1 29.607 331 189 8 62 378 94 394 5.86e-36 145
Msa1060900 AT4G21270.1 29.947 374 200 8 26 374 432 768 7.57e-36 145
Msa1060900 AT2G21380.2 28.611 360 207 10 26 378 105 421 1.38e-35 144
Msa1060900 AT2G21380.1 28.611 360 207 10 26 378 105 421 1.38e-35 144
Msa1060900 AT3G12020.4 29.248 359 210 10 34 378 60 388 2.41e-35 144
Msa1060900 AT3G12020.1 29.248 359 210 10 34 378 60 388 2.41e-35 144
Msa1060900 AT3G50240.3 32.174 345 153 11 121 415 4 317 2.43e-35 144
Msa1060900 AT4G05190.2 31.496 381 185 12 26 374 416 752 2.46e-35 143
Msa1060900 AT4G05190.1 31.496 381 185 12 26 374 429 765 2.98e-35 143
Msa1060900 AT3G12020.3 29.248 359 210 10 34 378 60 388 4.64e-35 143
Msa1060900 AT3G12020.2 29.248 359 210 10 34 378 60 388 4.64e-35 143
Msa1060900 AT1G63640.2 30.411 365 190 13 26 374 473 789 5.91e-35 142
Msa1060900 AT1G73860.1 30.579 363 200 11 26 374 510 834 9.49e-35 142
Msa1060900 AT3G19050.1 29.243 383 199 13 26 380 194 532 1.43e-34 142
Msa1060900 AT1G73860.2 30.579 363 200 11 26 374 427 751 1.53e-34 141
Msa1060900 AT1G63640.1 30.108 372 189 13 26 374 473 796 1.97e-34 141
Msa1060900 AT1G63640.4 30.108 372 189 13 26 374 473 796 1.97e-34 141
Msa1060900 AT5G06670.6 27.296 392 207 12 11 378 57 394 2.00e-34 140
Msa1060900 AT5G06670.1 27.296 392 207 12 11 378 57 394 2.00e-34 140
Msa1060900 AT1G63640.3 30.108 372 189 13 26 374 473 796 2.04e-34 141
Msa1060900 AT1G63640.5 30.108 372 189 13 26 374 463 786 2.25e-34 140
Msa1060900 AT1G72250.2 29.189 370 201 11 26 378 501 826 6.69e-34 139
Msa1060900 AT3G43210.3 28.426 394 211 13 11 380 4 350 7.09e-34 139
Msa1060900 AT3G43210.5 28.426 394 211 13 11 380 4 350 7.09e-34 139
Msa1060900 AT3G43210.2 28.426 394 211 13 11 380 4 350 7.09e-34 139
Msa1060900 AT3G43210.4 28.426 394 211 13 11 380 4 350 7.09e-34 139
Msa1060900 AT3G43210.1 28.426 394 211 13 11 380 4 350 7.09e-34 139
Msa1060900 AT3G10310.2 30.952 378 202 11 26 387 364 698 7.35e-34 139
Msa1060900 AT3G44050.1 29.815 379 202 11 26 380 94 432 7.63e-34 139
Msa1060900 AT1G72250.4 29.189 370 201 11 26 378 512 837 7.63e-34 139
Msa1060900 AT1G72250.3 29.189 370 201 11 26 378 513 838 7.77e-34 139
Msa1060900 AT1G72250.1 29.189 370 201 11 26 378 492 817 7.81e-34 139
Msa1060900 AT3G10310.1 30.952 378 202 11 26 387 364 698 8.38e-34 139
Msa1060900 AT3G44730.2 31.267 371 186 13 26 374 423 746 1.25e-33 138
Msa1060900 AT3G44730.3 31.267 371 186 13 26 374 423 746 1.25e-33 138
Msa1060900 AT3G44730.1 31.267 371 186 13 26 374 378 701 1.33e-33 138
Msa1060900 AT3G44730.4 31.267 371 186 13 26 374 378 701 1.33e-33 138
Msa1060900 AT3G51150.2 30.270 370 199 9 25 379 17 342 1.45e-33 138
Msa1060900 AT3G51150.4 30.270 370 199 9 25 379 17 342 1.45e-33 138
Msa1060900 AT3G51150.3 30.270 370 199 9 25 379 17 342 1.45e-33 138
Msa1060900 AT3G51150.1 30.270 370 199 9 25 379 17 342 1.56e-33 138
Msa1060900 AT4G24170.1 30.623 369 195 12 25 379 6 327 1.60e-33 138
Msa1060900 AT4G24170.2 30.623 369 195 12 25 379 6 327 1.60e-33 138
Msa1060900 AT3G54870.3 29.755 326 181 8 77 382 148 445 2.52e-33 137
Msa1060900 AT3G54870.1 29.755 326 181 8 77 382 148 445 2.78e-33 137
Msa1060900 AT3G54870.2 29.664 327 182 8 76 382 147 445 2.90e-33 137
Msa1060900 AT5G66310.2 29.730 370 201 10 25 379 18 343 9.81e-33 135
Msa1060900 AT5G66310.3 29.730 370 201 10 25 379 18 343 9.81e-33 135
Msa1060900 AT5G66310.1 29.730 370 201 10 25 379 18 343 9.81e-33 135
Msa1060900 AT3G23670.2 28.278 389 203 9 21 380 92 433 1.15e-32 135
Msa1060900 AT4G14150.1 28.535 389 202 10 21 380 87 428 1.16e-32 135
Msa1060900 AT3G10180.1 30.312 353 199 9 78 414 39 360 1.59e-32 135
Msa1060900 AT3G10180.2 30.312 353 199 9 78 414 39 360 1.62e-32 135
Msa1060900 AT3G23670.1 28.278 389 203 9 21 380 92 433 2.06e-32 135
Msa1060900 AT4G27180.1 30.026 383 184 11 26 374 388 720 2.06e-32 134
Msa1060900 AT4G27180.2 30.026 383 184 11 26 374 388 720 2.06e-32 134
Msa1060900 AT1G18370.1 29.688 384 213 10 10 380 16 355 3.19e-32 134
Msa1060900 AT2G47500.1 29.973 377 187 13 26 373 400 728 4.17e-32 134
Msa1060900 AT2G47500.2 29.973 377 187 13 26 373 400 728 5.84e-32 133
Msa1060900 AT5G27550.2 29.268 369 200 12 26 378 133 456 3.46e-31 130
Msa1060900 AT5G27550.1 29.268 369 200 12 26 378 133 456 3.46e-31 130
Msa1060900 AT5G27000.1 28.809 361 207 11 26 374 395 717 8.30e-31 129
Msa1060900 AT3G17360.1 31.023 303 158 6 102 380 232 507 2.52e-30 129
Msa1060900 AT3G17360.3 31.023 303 158 6 102 380 232 507 2.64e-30 128
Msa1060900 AT3G17360.2 31.023 303 158 6 102 380 232 507 2.69e-30 128
Msa1060900 AT1G09170.5 30.189 371 195 12 26 373 435 764 2.74e-30 128
Msa1060900 AT1G09170.4 30.189 371 195 12 26 373 435 764 4.73e-30 127
Msa1060900 AT5G54670.1 28.610 374 201 10 26 374 397 729 4.82e-30 127
Msa1060900 AT5G54670.2 28.610 374 201 10 26 374 397 729 4.82e-30 127
Msa1060900 AT5G54670.3 28.610 374 201 10 26 374 337 669 5.27e-30 126
Msa1060900 AT1G09170.2 30.189 371 195 12 26 373 435 764 7.01e-30 126
Msa1060900 AT1G09170.3 30.189 371 195 12 26 373 435 764 9.26e-30 126
Msa1060900 AT1G09170.7 30.189 371 195 12 26 373 435 764 9.26e-30 126
Msa1060900 AT2G21300.2 28.530 347 193 8 25 360 24 326 1.00e-28 123
Msa1060900 AT2G21300.4 28.530 347 193 8 25 360 24 326 1.00e-28 123
Msa1060900 AT2G21300.3 28.530 347 193 8 25 360 24 326 1.00e-28 123
Msa1060900 AT2G21300.1 28.530 347 193 8 25 360 24 326 1.00e-28 123
Msa1060900 AT2G21300.5 28.530 347 193 8 25 360 24 326 1.00e-28 123
Msa1060900 AT4G38950.3 27.378 347 197 8 25 360 13 315 4.02e-27 117
Msa1060900 AT4G38950.5 27.378 347 197 8 25 360 13 315 4.02e-27 117
Msa1060900 AT4G38950.4 27.378 347 197 8 25 360 13 315 4.02e-27 117
Msa1060900 AT4G38950.1 27.378 347 197 8 25 360 13 315 4.02e-27 117
Msa1060900 AT4G38950.2 27.378 347 197 8 25 360 13 315 4.02e-27 117
Msa1060900 AT1G01950.4 28.614 332 185 9 116 425 1 302 4.46e-27 117
Msa1060900 AT1G09170.1 29.315 365 170 11 26 373 435 728 1.94e-26 115
Msa1060900 AT1G09170.6 30.030 333 180 10 26 346 435 726 3.29e-26 114
Msa1060900 AT1G09170.8 30.030 333 180 10 26 346 435 726 3.29e-26 114
Msa1060900 AT5G27950.2 32.075 265 138 6 129 378 1 238 6.99e-25 108
Msa1060900 AT5G65460.2 26.148 501 278 20 26 493 139 580 1.95e-24 109
Msa1060900 AT5G65460.6 26.148 501 278 20 26 493 139 580 2.19e-24 109
Msa1060900 AT5G65460.1 26.148 501 278 20 26 493 139 580 2.64e-24 109
Msa1060900 AT5G65460.4 26.148 501 278 20 26 493 139 580 2.72e-24 109
Msa1060900 AT1G59540.2 28.626 262 150 6 129 380 1 235 2.77e-23 105
Msa1060900 AT5G42490.2 28.939 311 162 10 25 323 9 272 1.92e-22 103
Msa1060900 AT5G42490.1 28.939 311 162 10 25 323 9 272 2.25e-22 103
Msa1060900 AT5G65460.3 25.787 508 278 21 26 493 139 587 4.02e-22 102
Msa1060900 AT4G14330.1 26.250 320 175 9 79 378 89 367 6.86e-22 101
Msa1060900 AT5G10470.2 25.459 381 224 12 26 397 143 472 8.46e-21 98.2
Msa1060900 AT5G10470.1 25.459 381 224 12 26 397 143 472 8.83e-21 98.2
Msa1060900 AT3G20150.2 24.699 332 183 11 81 380 142 438 3.45e-18 89.7
Msa1060900 AT3G20150.1 24.699 332 183 11 81 380 142 438 3.69e-18 89.7
Msa1060900 AT3G51150.5 32.812 192 95 4 195 379 25 189 8.99e-18 88.2
Msa1060900 AT1G20060.10 26.471 340 186 11 46 361 130 429 7.29e-16 82.4
Msa1060900 AT1G20060.3 26.471 340 186 11 46 361 130 429 7.30e-16 82.4
Msa1060900 AT1G20060.7 26.471 340 186 11 46 361 130 429 7.67e-16 82.0
Msa1060900 AT1G20060.4 26.471 340 186 11 46 361 130 429 7.73e-16 82.0
Msa1060900 AT1G20060.5 26.471 340 186 11 46 361 130 429 8.09e-16 82.0
Msa1060900 AT1G20060.9 26.471 340 186 11 46 361 130 429 8.36e-16 82.0
Msa1060900 AT1G20060.2 26.471 340 186 11 46 361 130 429 8.52e-16 82.0
Msa1060900 AT1G20060.8 26.471 340 186 11 46 361 130 429 8.65e-16 82.0
Msa1060900 AT1G20060.6 26.471 340 186 11 46 361 130 429 8.74e-16 82.0
Msa1060900 AT1G20060.1 27.215 158 101 3 74 222 157 309 6.41e-12 69.7
Msa1060900 AT5G65460.5 26.870 361 194 15 159 493 18 334 4.31e-11 67.0

Find 165 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAAACTGCTACATCATTT+TGG 0.137036 7_2:+49619084 None:intergenic
CTCCACTAAGAAAGGGTTTC+AGG 0.192536 7_2:-49615546 Msa1060900:CDS
TGATTCTAGTGCTGCTTTAT+TGG 0.214051 7_2:+49616035 None:intergenic
CTGTCCCTATAGGGTGTTCT+TGG 0.234705 7_2:+49617263 None:intergenic
AATTCGGACATTGTATTTAC+AGG 0.240436 7_2:+49617650 None:intergenic
AGCAAGTGAGATTTCAGTTT+TGG 0.243100 7_2:-49617717 Msa1060900:CDS
GCTGGCACATCTTTGCTTAA+TGG 0.251057 7_2:+49615677 None:intergenic
CCAAGGTAAGGGTCATAGTT+AGG 0.270762 7_2:-49619193 Msa1060900:CDS
AGAGGAGCTACTAGAGTTAA+AGG 0.271561 7_2:-49615245 Msa1060900:intron
CTAGAGAGTCCTGCAATATA+CGG 0.293700 7_2:+49617231 None:intergenic
TTCTAGCCAAGCTTTCAATT+TGG 0.299864 7_2:+49616637 None:intergenic
TGCTTCTGATTCTAGCAAAA+AGG 0.301472 7_2:-49616306 Msa1060900:intron
ATCTGTTCATACTGTTAGTT+TGG 0.307923 7_2:-49616741 Msa1060900:CDS
CAGGTTACCGTCCACTCAAT+TGG 0.310031 7_2:-49617463 Msa1060900:CDS
AAGAAAGGGTTTCAGGAAAA+TGG 0.319274 7_2:-49615539 Msa1060900:CDS
TGCCCTCATGGTTGCCTGCC+TGG 0.327794 7_2:-49617195 Msa1060900:intron
AAAAGTGAGATACAAGAAAC+TGG 0.328169 7_2:+49619125 None:intergenic
CCTTACCTTGGAAACTGAAA+TGG 0.336754 7_2:+49619205 None:intergenic
AATGCTACTGTGTTTGCTTA+TGG 0.345908 7_2:-49618815 Msa1060900:CDS
TTCCTGAAACCCTTTCTTAG+TGG 0.355395 7_2:+49615544 None:intergenic
GTCAATTTGCTGTCCCTATA+GGG 0.356552 7_2:+49617254 None:intergenic
GTGGAGCAGGTTGCAGAAAA+AGG 0.356653 7_2:+49615563 None:intergenic
TGCAAGAAGTTCTGCTTTGA+AGG 0.362396 7_2:-49615495 Msa1060900:intron
TCAGAATCCAGGAGAATATC+AGG 0.366885 7_2:-49616765 Msa1060900:intron
GTCCACTCAATTGGGGTAAT+GGG 0.368280 7_2:-49617454 Msa1060900:CDS
ATAGTCCCCTGAGGTGAATA+TGG 0.371640 7_2:+49617681 None:intergenic
CGTCCACTCAATTGGGGTAA+TGG 0.371974 7_2:-49617455 Msa1060900:CDS
GGTCAATTTGCTGTCCCTAT+AGG 0.380127 7_2:+49617253 None:intergenic
CATTATGTCCTTCCGTTGCT+TGG 0.383909 7_2:+49617420 None:intergenic
CAAACCAAGAACACCCTATA+GGG 0.384546 7_2:-49617267 Msa1060900:CDS
AGCAGAGCTAATGGTGGAAC+CGG 0.386413 7_2:+49616544 None:intergenic
TACTGTGTAAGCAGGGCCTT+TGG 0.386750 7_2:-49616362 Msa1060900:intron
CTTACCTTGGAAACTGAAAT+GGG 0.387259 7_2:+49619206 None:intergenic
TCAGGGCATAGGAGACAAAA+TGG 0.393383 7_2:-49614818 Msa1060900:intron
AGGTTACCGTCCACTCAATT+GGG 0.394689 7_2:-49617462 Msa1060900:CDS
CCATTTCAGTTTCCAAGGTA+AGG 0.394848 7_2:-49619205 Msa1060900:CDS
TCCATGTCAACGTTACCTTT+TGG 0.410793 7_2:+49616662 None:intergenic
CCGATGATACCGGCTGTATT+CGG 0.410857 7_2:-49618845 Msa1060900:CDS
AGAAGAAAGTCCACTAAAAT+CGG 0.413708 7_2:-49614773 Msa1060900:intron
GAAATGGGGTTGTTATTGTT+GGG 0.418057 7_2:+49619221 None:intergenic
GTGTTTGCTTATGGTGCTAC+TGG 0.420943 7_2:-49618806 Msa1060900:CDS
ACAAACCAAGAACACCCTAT+AGG 0.421273 7_2:-49617268 Msa1060900:CDS
TTGAATACCATTGATGTTGA+TGG 0.423673 7_2:+49615619 None:intergenic
CAAGGTAAGGGTCATAGTTA+GGG 0.424627 7_2:-49619192 Msa1060900:CDS
TTGAGGAGTGAGAGTGGGAG+AGG 0.426770 7_2:+49619340 None:intergenic
TTGAAATTGAGGAGTGAGAG+TGG 0.427528 7_2:+49619334 None:intergenic
TGAAATGGGGTTGTTATTGT+TGG 0.427888 7_2:+49619220 None:intergenic
AAAGTAGTGACCGTTTGTTT+TGG 0.432476 7_2:+49619369 None:intergenic
GCTTATGGTGCTACTGGAAG+TGG 0.436396 7_2:-49618800 Msa1060900:CDS
AAACCCTTTCTTAGTGGAGC+AGG 0.438676 7_2:+49615550 None:intergenic
GGAGAAGACCTCTTGAAATT+CGG 0.440719 7_2:+49617634 None:intergenic
CAAATTGACCCGTATATTGC+AGG 0.450340 7_2:-49617240 Msa1060900:CDS
CGTATATTGCAGGACTCTCT+AGG 0.452947 7_2:-49617230 Msa1060900:CDS
GCTATGTAGAACATGCATTC+TGG 0.454134 7_2:-49616096 Msa1060900:intron
TATGTGTGATTTCAGAATCC+AGG 0.457622 7_2:-49616776 Msa1060900:intron
TGATCTCCTAGCAGAGCTAA+TGG 0.462039 7_2:+49616535 None:intergenic
AAATGGGGTTGTTATTGTTG+GGG 0.466146 7_2:+49619222 None:intergenic
GCAACCTGCTCCACTAAGAA+AGG 0.467614 7_2:-49615554 Msa1060900:CDS
AATAGAAGGAGCTGCAATGA+AGG 0.472976 7_2:-49617368 Msa1060900:CDS
TGGAAGCCAAATTGAAAGCT+TGG 0.473460 7_2:-49616643 Msa1060900:CDS
TGTGGTTTCGTGAGAGAGGA+AGG 0.474546 7_2:+49619163 None:intergenic
CAAATTAATTGAAAAGAGTA+AGG 0.479795 7_2:+49614383 None:intergenic
AACTTATAGCTTTACCAGGC+AGG 0.481857 7_2:+49617181 None:intergenic
ACAGATTCCTGATATTCTCC+TGG 0.485357 7_2:+49616758 None:intergenic
TCAAATCTTTCTCACATCAA+TGG 0.485581 7_2:-49619282 Msa1060900:exon
TTAGTTTGGCTGCTCGATCA+AGG 0.490952 7_2:-49616727 Msa1060900:CDS
CTCTCTCCCATCAACATCAA+TGG 0.494198 7_2:-49615626 Msa1060900:CDS
CCTAACTATGACCCTTACCT+TGG 0.494338 7_2:+49619193 None:intergenic
CAACCCCATTTCAGTTTCCA+AGG 0.495157 7_2:-49619210 Msa1060900:CDS
GGGATCTAGTCGTGCCCTCA+TGG 0.500153 7_2:-49617207 Msa1060900:CDS
CCGAATACAGCCGGTATCAT+CGG 0.501570 7_2:+49618845 None:intergenic
TTAACTGACCTGGAGAAGAT+TGG 0.501889 7_2:-49614661 Msa1060900:CDS
CAGGTAATGAAGACAATAGA+AGG 0.502947 7_2:-49617382 Msa1060900:CDS
ATTGTATTCCTTCAGGGCAT+AGG 0.503428 7_2:-49614829 Msa1060900:intron
GAAGATTGATGTTGAAATTG+AGG 0.506684 7_2:+49619323 None:intergenic
AAGATGGCCATATTCACCTC+AGG 0.507995 7_2:-49617688 Msa1060900:CDS
AATGGACTTTGTAGTACTGC+TGG 0.508061 7_2:+49615659 None:intergenic
TACTTTCAATAGCTCAGTGA+AGG 0.508772 7_2:-49616510 Msa1060900:CDS
ATCTCAAAGACCCACTTACC+AGG 0.510439 7_2:-49619064 Msa1060900:intron
CACATTTGACAGTGCAAACA+AGG 0.511891 7_2:+49617310 None:intergenic
CATTTCAGTTTCCAAGGTAA+GGG 0.516317 7_2:-49619204 Msa1060900:CDS
TCGGAACGAGTGTTACAAGT+TGG 0.519822 7_2:-49618927 Msa1060900:CDS
AATGCGTTTAAAGTTGATGC+AGG 0.524374 7_2:-49617401 Msa1060900:CDS
GTCTCTAGTTTATGAGCTGA+AGG 0.524968 7_2:+49616686 None:intergenic
GTATATTGCAGGACTCTCTA+GGG 0.527165 7_2:-49617229 Msa1060900:CDS
GGATTCTTTCTTTGATCAAG+AGG 0.527637 7_2:-49618906 Msa1060900:CDS
AGAAGTTAGTCCGATGATAC+CGG 0.530264 7_2:-49618855 Msa1060900:CDS
AATGGGGTTGTTATTGTTGG+GGG 0.530438 7_2:+49619223 None:intergenic
TTTGCGCCTCTGAATACCAC+TGG 0.531310 7_2:+49617613 None:intergenic
ATTTGTTAAATAATGCAAGC+AGG 0.533405 7_2:-49615365 Msa1060900:intron
CATGTTGCAGTTAACTGACC+TGG 0.534410 7_2:-49614671 Msa1060900:intron
TTCATACTATGAGGTCTACA+TGG 0.535101 7_2:-49617768 Msa1060900:CDS
TGAATACCATTGATGTTGAT+GGG 0.537076 7_2:+49615620 None:intergenic
ATTGCCAACGGCATCAAGCC+AGG 0.538567 7_2:+49617839 None:intergenic
TCAGGAAAATGGCACTCCAC+TGG 0.539018 7_2:-49615528 Msa1060900:CDS
AAAATCCAAACCAAAACAAA+CGG 0.539461 7_2:-49619379 Msa1060900:five_prime_UTR
GATTGGTCTCTCTATGAAGC+AGG 0.540064 7_2:-49614644 Msa1060900:intron
TACTATCGACTCCTCCTGAT+GGG 0.542716 7_2:-49617529 Msa1060900:CDS
TTGACAAATAGACAGGATAG+TGG 0.543005 7_2:+49617814 None:intergenic
CAGGGAACTGAAGAACAACC+TGG 0.543114 7_2:-49617857 Msa1060900:CDS
ACAAGACTTCCATTCCCATC+AGG 0.544458 7_2:+49617515 None:intergenic
CTGAACCTCATAGACTTGGC+AGG 0.548095 7_2:-49617482 Msa1060900:CDS
CATAAACTAGAGACACCAAA+AGG 0.549478 7_2:-49616677 Msa1060900:CDS
TGGAAAGACATATACTATGC+AGG 0.549602 7_2:-49618780 Msa1060900:intron
GACGTATCAAGCAGGAGTCA+TGG 0.549957 7_2:-49617569 Msa1060900:CDS
TAGAGAGACCAATCTTCTCC+AGG 0.549993 7_2:+49614653 None:intergenic
TAGAGAGTCCTGCAATATAC+GGG 0.552724 7_2:+49617232 None:intergenic
TTAGTGGACTTTCTTCTCTG+AGG 0.555574 7_2:+49614779 None:intergenic
TCGACTCCTCCTGATGGGAA+TGG 0.557805 7_2:-49617524 Msa1060900:CDS
TCAAAGACATAGTCTGAAGA+TGG 0.559622 7_2:+49615594 None:intergenic
CAACCTGCTCCACTAAGAAA+GGG 0.561860 7_2:-49615553 Msa1060900:CDS
AAGAGCTCACAACAAAGACT+TGG 0.567277 7_2:-49616599 Msa1060900:CDS
GTACTATCGACTCCTCCTGA+TGG 0.574583 7_2:-49617530 Msa1060900:CDS
TTCTTGTGGTTTCGTGAGAG+AGG 0.578238 7_2:+49619159 None:intergenic
AGCTCAAATTTCATACTATG+AGG 0.579166 7_2:-49617777 Msa1060900:CDS
GCCTCAATGACGTATCAAGC+AGG 0.584897 7_2:-49617577 Msa1060900:CDS
GGTAACCTGCCAAGTCTATG+AGG 0.585231 7_2:+49617477 None:intergenic
TACAATGTCCGAATTTCAAG+AGG 0.592483 7_2:-49617642 Msa1060900:CDS
GATGTATTCCAAGCAACGGA+AGG 0.596808 7_2:-49617428 Msa1060900:CDS
TTTCAAGAGGTCTTCTCCAG+TGG 0.601275 7_2:-49617629 Msa1060900:CDS
CTTGCACTGAATTTGTCCAG+TGG 0.602500 7_2:+49615512 None:intergenic
GCAGAGCTAATGGTGGAACC+GGG 0.605202 7_2:+49616545 None:intergenic
GGGAATGGAAGTCTTGTATG+TGG 0.605834 7_2:-49617509 Msa1060900:CDS
ACAACCTGGCTTGATGCCGT+TGG 0.606768 7_2:-49617843 Msa1060900:CDS
CTGTCTATTTGTCAAAACAC+TGG 0.610198 7_2:-49617806 Msa1060900:CDS
ACCAAAAGGTAACGTTGACA+TGG 0.612646 7_2:-49616663 Msa1060900:CDS
GAATCATATAATGATGTACC+TGG 0.612765 7_2:-49616018 Msa1060900:intron
ACTTTCAATAGCTCAGTGAA+GGG 0.614829 7_2:-49616509 Msa1060900:CDS
ATAGAAGGAGCTGCAATGAA+GGG 0.615772 7_2:-49617367 Msa1060900:CDS
GTGGTTTCGTGAGAGAGGAA+GGG 0.615894 7_2:+49619164 None:intergenic
GATCAAGAGGATAACAATGT+GGG 0.616118 7_2:-49618893 Msa1060900:CDS
AGGCGCAAAACTGCACACAC+AGG 0.616518 7_2:-49617599 Msa1060900:CDS
AAAACTGAACCTCATAGACT+TGG 0.619189 7_2:-49617486 Msa1060900:CDS
ATGATACCGGCTGTATTCGG+TGG 0.619818 7_2:-49618842 Msa1060900:CDS
CATTACCCCAATTGAGTGGA+CGG 0.622510 7_2:+49617456 None:intergenic
AACCCATTACCCCAATTGAG+TGG 0.622973 7_2:+49617452 None:intergenic
GTTTGATGTATTCCAAGCAA+CGG 0.624754 7_2:-49617432 Msa1060900:CDS
TGAAATTGAGGAGTGAGAGT+GGG 0.625065 7_2:+49619335 None:intergenic
TTACATCCACCGAATACAGC+CGG 0.628030 7_2:+49618836 None:intergenic
TGGGTCATCACAATTTCTTG+TGG 0.632098 7_2:+49619145 None:intergenic
AGATGGCCATATTCACCTCA+GGG 0.636559 7_2:-49617687 Msa1060900:CDS
GGTTACCGTCCACTCAATTG+GGG 0.640265 7_2:-49617461 Msa1060900:CDS
TCTTCTCCAGTGGTATTCAG+AGG 0.640669 7_2:-49617619 Msa1060900:CDS
GTTCCACCATTAGCTCTGCT+AGG 0.640753 7_2:-49616541 Msa1060900:CDS
TACCAGGCAGGCAACCATGA+GGG 0.641534 7_2:+49617193 None:intergenic
GAACATGCATTCTGGTGTTG+AGG 0.643262 7_2:-49616088 Msa1060900:CDS
ACTCTAAGAGGTCGTAACAT+CGG 0.645191 7_2:+49617744 None:intergenic
TGATCAAGAGGATAACAATG+TGG 0.647876 7_2:-49618894 Msa1060900:CDS
AAAGCTTGGCTAGAATCAAG+AGG 0.648838 7_2:-49616629 Msa1060900:CDS
AAAGTGAGATACAAGAAACT+GGG 0.651165 7_2:+49619126 None:intergenic
TAAGAGAGAGACTGAACATG+AGG 0.654464 7_2:-49616058 Msa1060900:CDS
TTCAATAGCTCAGTGAAGGG+TGG 0.656508 7_2:-49616506 Msa1060900:CDS
AGACTTCCATTCCCATCAGG+AGG 0.657956 7_2:+49617518 None:intergenic
TCCTGCTTGATACGTCATTG+AGG 0.658697 7_2:+49617576 None:intergenic
TTCAGACTATGTCTTTGACA+CGG 0.659344 7_2:-49615589 Msa1060900:CDS
AGGATAGTGGACATTGCCAA+CGG 0.676034 7_2:+49617827 None:intergenic
TTACCTTGGAAACTGAAATG+GGG 0.684729 7_2:+49619207 None:intergenic
TCTCCTAGCAGAGCTAATGG+TGG 0.684954 7_2:+49616538 None:intergenic
TATATTGCAGGACTCTCTAG+GGG 0.686018 7_2:-49617228 Msa1060900:CDS
TTACCAGGCAGGCAACCATG+AGG 0.691053 7_2:+49617192 None:intergenic
AAGCTCAACATACTACTGAG+AGG 0.692590 7_2:-49616463 Msa1060900:intron
ATTTCTAAAAGAGACACCAA+AGG 0.694450 7_2:+49616346 None:intergenic
GATGGCCATATTCACCTCAG+GGG 0.723977 7_2:-49617686 Msa1060900:CDS
ATATTGCAGGACTCTCTAGG+GGG 0.730181 7_2:-49617227 Msa1060900:CDS
GAACTTGAGATAGTCCCCTG+AGG 0.791662 7_2:+49617672 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTGAATTTTTAGTATT+TGG - chr7_2:49615095-49615114 Msa1060900:intron 10.0%
!!! TTAGTTAAGTTATTGAATTT+TGG - chr7_2:49614669-49614688 Msa1060900:intron 15.0%
!!! CAATTTTTTTTGTATGTTTT+TGG - chr7_2:49614934-49614953 Msa1060900:intron 15.0%
!! TTAATAAACTACTAAAAATC+TGG + chr7_2:49615719-49615738 None:intergenic 15.0%
!!! ATATACTCTGATTTTTTAAA+AGG - chr7_2:49616746-49616765 Msa1060900:CDS 15.0%
!! TTCGATATTATAATGAAAAA+TGG - chr7_2:49617683-49617702 Msa1060900:CDS 15.0%
!! TTAAAAATCAAACAGTATTA+AGG + chr7_2:49618369-49618388 None:intergenic 15.0%
!! TTTCAACTAAAATTTCATTA+TGG + chr7_2:49619041-49619060 None:intergenic 15.0%
!!! AATTGAATTTTTTTGAAACC+TGG + chr7_2:49614597-49614616 None:intergenic 20.0%
!!! TGAATTTTGGTTTTTGATTT+TGG - chr7_2:49614682-49614701 Msa1060900:intron 20.0%
!!! TTTGATTTTGGTTTTTTAGT+CGG - chr7_2:49614694-49614713 Msa1060900:intron 20.0%
!! AAATTCAATAAATCTACCAA+AGG + chr7_2:49615087-49615106 None:intergenic 20.0%
!!! TTATTTTCAATCCTCATTTT+TGG + chr7_2:49615645-49615664 None:intergenic 20.0%
!!! TTTTTCCTCTCATTTAATAT+TGG - chr7_2:49616490-49616509 Msa1060900:CDS 20.0%
!! AAACTAATCAGAATTAATAG+GGG + chr7_2:49616628-49616647 None:intergenic 20.0%
!! GAAACTAATCAGAATTAATA+GGG + chr7_2:49616629-49616648 None:intergenic 20.0%
!!! TCTTTTAGAAATTTACTAGA+TGG - chr7_2:49617305-49617324 Msa1060900:CDS 20.0%
!!! TTTTAACTTCACTAACAAAA+TGG - chr7_2:49618180-49618199 Msa1060900:intron 20.0%
!! AAAATTAGATTATGTGAGAA+AGG + chr7_2:49618219-49618238 None:intergenic 20.0%
!! AGAAATTATGCAAAATACAA+GGG + chr7_2:49618314-49618333 None:intergenic 20.0%
!! TAGAAATTATGCAAAATACA+AGG + chr7_2:49618315-49618334 None:intergenic 20.0%
!! TAAAGAGACTATATTCATAT+TGG + chr7_2:49618443-49618462 None:intergenic 20.0%
!! TCATTATTGTACTATTCTTT+AGG - chr7_2:49618476-49618495 Msa1060900:intron 20.0%
!! CATTATTGTACTATTCTTTA+GGG - chr7_2:49618477-49618496 Msa1060900:intron 20.0%
!!! AGTTTTTGACAAAATTAAAG+TGG + chr7_2:49618618-49618637 None:intergenic 20.0%
!!! TTTCTTCATTTTCTAATACT+TGG - chr7_2:49618779-49618798 Msa1060900:intron 20.0%
!!! TTCTTCATTTTCTAATACTT+GGG - chr7_2:49618780-49618799 Msa1060900:intron 20.0%
!! CAAATTAATTGAAAAGAGTA+AGG + chr7_2:49619260-49619279 None:intergenic 20.0%
!!! TTTTACTTGCATTAACAAAA+AGG - chr7_2:49619362-49619381 Msa1060900:five_prime_UTR 20.0%
! AAAATCCAAACCAAAACAAA+CGG - chr7_2:49614261-49614280 Msa1060900:three_prime_UTR 25.0%
!! TTGATTTTTGATGAGAATTG+TGG + chr7_2:49614342-49614361 None:intergenic 25.0%
!! ATAAACTGCTACATCATTTT+GGG + chr7_2:49614558-49614577 None:intergenic 25.0%
! AACAATTATGTGATTATGTG+AGG - chr7_2:49615039-49615058 Msa1060900:intron 25.0%
! ACAATTATGTGATTATGTGA+GGG - chr7_2:49615040-49615059 Msa1060900:intron 25.0%
!! AAATGTAAGTTTAAGTTCAG+AGG - chr7_2:49615122-49615141 Msa1060900:intron 25.0%
!! AATGTAAGTTTAAGTTCAGA+GGG - chr7_2:49615123-49615142 Msa1060900:intron 25.0%
!! TGGTTATACTTTTCTGAATA+TGG - chr7_2:49615193-49615212 Msa1060900:intron 25.0%
!! CTTTTCTGAATATGGTAAAA+CGG - chr7_2:49615201-49615220 Msa1060900:intron 25.0%
! ATACATTATTGCACTAGATA+AGG + chr7_2:49615286-49615305 None:intergenic 25.0%
! TTATCTAGTGCAATAATGTA+TGG - chr7_2:49615285-49615304 Msa1060900:intron 25.0%
!! ATTGCAATGATTTTATCTCA+AGG - chr7_2:49615464-49615483 Msa1060900:intron 25.0%
! TGAACCTTAATCGTATATTA+GGG - chr7_2:49615529-49615548 Msa1060900:CDS 25.0%
! CTAATTTCAAGAATCAAAAG+TGG + chr7_2:49615673-49615692 None:intergenic 25.0%
!! ATAAAACTTATAGCTTTACC+AGG + chr7_2:49616466-49616485 None:intergenic 25.0%
! ATGAACCAATATTAAATGAG+AGG + chr7_2:49616498-49616517 None:intergenic 25.0%
!!! CTCATTTAATATTGGTTCAT+TGG - chr7_2:49616498-49616517 Msa1060900:CDS 25.0%
! CGAAACTAATCAGAATTAAT+AGG + chr7_2:49616630-49616649 None:intergenic 25.0%
! GGATAGAAAAACAAATATCT+AGG - chr7_2:49616705-49616724 Msa1060900:CDS 25.0%
! ATCAGAGTATATATTAGATC+TGG + chr7_2:49616738-49616757 None:intergenic 25.0%
!!! ATTCTGAAATCACACATAAA+GGG + chr7_2:49616862-49616881 None:intergenic 25.0%
! ACAGTTGGATAAATACTAAA+CGG - chr7_2:49617754-49617773 Msa1060900:CDS 25.0%
!! CACATACATTGATTAATACT+TGG - chr7_2:49617879-49617898 Msa1060900:intron 25.0%
! TTAGTGAAGTTAAAACAACT+AGG + chr7_2:49618175-49618194 None:intergenic 25.0%
!! ATTTGTTAAATAATGCAAGC+AGG - chr7_2:49618275-49618294 Msa1060900:intron 25.0%
!!! TTTGATTTTTAAATGCAGAG+AGG - chr7_2:49618377-49618396 Msa1060900:intron 25.0%
!!! AAAATAATGTGATGGATGTT+TGG + chr7_2:49618691-49618710 None:intergenic 25.0%
! ACAAAGTGAAAATAATGTGA+TGG + chr7_2:49618699-49618718 None:intergenic 25.0%
!!! TTTATACTAACCGATTTTAG+TGG + chr7_2:49618880-49618899 None:intergenic 25.0%
!!! CTTTTGGTAATGCAATTTTT+CGG - chr7_2:49618946-49618965 Msa1060900:intron 25.0%
!!! GTGTAATTTTCTTAGTCTTT+TGG - chr7_2:49619212-49619231 Msa1060900:CDS 25.0%
GAAGATTGATGTTGAAATTG+AGG + chr7_2:49614320-49614339 None:intergenic 30.0%
TCAAATCTTTCTCACATCAA+TGG - chr7_2:49614358-49614377 Msa1060900:three_prime_UTR 30.0%
AAAGTGAGATACAAGAAACT+GGG + chr7_2:49614517-49614536 None:intergenic 30.0%
AAAAGTGAGATACAAGAAAC+TGG + chr7_2:49614518-49614537 None:intergenic 30.0%
! GATAAACTGCTACATCATTT+TGG + chr7_2:49614559-49614578 None:intergenic 30.0%
!!! TTTTTTGAAACCTGGTAAGT+GGG + chr7_2:49614589-49614608 None:intergenic 30.0%
!!! TTTTTTTGAAACCTGGTAAG+TGG + chr7_2:49614590-49614609 None:intergenic 30.0%
!!! TGTATGTTTTTGGTATATGC+AGG - chr7_2:49614944-49614963 Msa1060900:intron 30.0%
TCAATAAATCTACCAAAGGT+GGG + chr7_2:49615083-49615102 None:intergenic 30.0%
TTCAATAAATCTACCAAAGG+TGG + chr7_2:49615084-49615103 None:intergenic 30.0%
TTTCATGTTTAACCATGACA+TGG - chr7_2:49615166-49615185 Msa1060900:intron 30.0%
TTCATGTTTAACCATGACAT+GGG - chr7_2:49615167-49615186 Msa1060900:intron 30.0%
ATTAGAGTTTGTACAACCTA+TGG + chr7_2:49615355-49615374 None:intergenic 30.0%
ATAGGTTGTACAAACTCTAA+TGG - chr7_2:49615354-49615373 Msa1060900:intron 30.0%
CTGAACCTTAATCGTATATT+AGG - chr7_2:49615528-49615547 Msa1060900:CDS 30.0%
ACATCCCTAATATACGATTA+AGG + chr7_2:49615536-49615555 None:intergenic 30.0%
TAGAAGTGAGAAAAACTCTA+GGG + chr7_2:49615592-49615611 None:intergenic 30.0%
TTCCTATACTACCAAAAATG+AGG - chr7_2:49615631-49615650 Msa1060900:CDS 30.0%
!!! ATCCTCATTTTTGGTAGTAT+AGG + chr7_2:49615636-49615655 None:intergenic 30.0%
AGCTCAAATTTCATACTATG+AGG - chr7_2:49615863-49615882 Msa1060900:intron 30.0%
AATTCGGACATTGTATTTAC+AGG + chr7_2:49615993-49616012 None:intergenic 30.0%
AATTCTCTTGGTCATTCTAA+TGG + chr7_2:49616589-49616608 None:intergenic 30.0%
!! GATTCTGAAATCACACATAA+AGG + chr7_2:49616863-49616882 None:intergenic 30.0%
ATCTGTTCATACTGTTAGTT+TGG - chr7_2:49616899-49616918 Msa1060900:intron 30.0%
! ATTTCTAAAAGAGACACCAA+AGG + chr7_2:49617297-49617316 None:intergenic 30.0%
!!! CCTGTCTTTTTCAATATTAG+TGG + chr7_2:49617420-49617439 None:intergenic 30.0%
CCACTAATATTGAAAAAGAC+AGG - chr7_2:49617417-49617436 Msa1060900:CDS 30.0%
GAATCATATAATGATGTACC+TGG - chr7_2:49617622-49617641 Msa1060900:CDS 30.0%
TAGTATTTATCCAACTGTTC+TGG + chr7_2:49617752-49617771 None:intergenic 30.0%
TGAATACCATTGATGTTGAT+GGG + chr7_2:49618023-49618042 None:intergenic 30.0%
TTGAATACCATTGATGTTGA+TGG + chr7_2:49618024-49618043 None:intergenic 30.0%
ATTCATATTGGACATTCATG+TGG + chr7_2:49618431-49618450 None:intergenic 30.0%
AATGATTTCTCAGACCAAAA+TGG + chr7_2:49618504-49618523 None:intergenic 30.0%
TTCAATCATTGTATTCCTTC+AGG - chr7_2:49618804-49618823 Msa1060900:CDS 30.0%
TCAATCATTGTATTCCTTCA+GGG - chr7_2:49618805-49618824 Msa1060900:CDS 30.0%
AGAAGAAAGTCCACTAAAAT+CGG - chr7_2:49618867-49618886 Msa1060900:CDS 30.0%
! TTAGTTCCTCATAATGCTTT+TGG - chr7_2:49618930-49618949 Msa1060900:CDS 30.0%
! TCTAACTTGTACTACTTGTT+TGG - chr7_2:49619093-49619112 Msa1060900:CDS 30.0%
!! TTTTTGCAGCTTTAGTGAAA+AGG + chr7_2:49619130-49619149 None:intergenic 30.0%
! GGTGTGATTCTTTTAATGTA+TGG - chr7_2:49619383-49619402 Msa1060900:five_prime_UTR 30.0%
!! TTTGGATTTTGACGCACTTT+TGG + chr7_2:49614251-49614270 None:intergenic 35.0%
! AAAGTAGTGACCGTTTGTTT+TGG + chr7_2:49614274-49614293 None:intergenic 35.0%
!! TTGTTATTGTTGGGGGTTTT+TGG + chr7_2:49614413-49614432 None:intergenic 35.0%
! AAATGGGGTTGTTATTGTTG+GGG + chr7_2:49614421-49614440 None:intergenic 35.0%
! GAAATGGGGTTGTTATTGTT+GGG + chr7_2:49614422-49614441 None:intergenic 35.0%
! TGAAATGGGGTTGTTATTGT+TGG + chr7_2:49614423-49614442 None:intergenic 35.0%
TTACCTTGGAAACTGAAATG+GGG + chr7_2:49614436-49614455 None:intergenic 35.0%
CTTACCTTGGAAACTGAAAT+GGG + chr7_2:49614437-49614456 None:intergenic 35.0%
CATTTCAGTTTCCAAGGTAA+GGG - chr7_2:49614436-49614455 Msa1060900:three_prime_UTR 35.0%
GGATTCTTTCTTTGATCAAG+AGG - chr7_2:49614734-49614753 Msa1060900:intron 35.0%
TGATCAAGAGGATAACAATG+TGG - chr7_2:49614746-49614765 Msa1060900:intron 35.0%
GATCAAGAGGATAACAATGT+GGG - chr7_2:49614747-49614766 Msa1060900:intron 35.0%
AATGCTACTGTGTTTGCTTA+TGG - chr7_2:49614825-49614844 Msa1060900:intron 35.0%
TGGAAAGACATATACTATGC+AGG - chr7_2:49614860-49614879 Msa1060900:intron 35.0%
! TTTAACCATGACATGGGTTA+TGG - chr7_2:49615173-49615192 Msa1060900:intron 35.0%
TATAACCATAACCCATGTCA+TGG + chr7_2:49615181-49615200 None:intergenic 35.0%
GCAATAATGTATGGATCCTT+TGG - chr7_2:49615294-49615313 Msa1060900:intron 35.0%
TCTAATGGTATTAATGCCGA+TGG - chr7_2:49615369-49615388 Msa1060900:CDS 35.0%
ATGCTCTCTTCATTTACCAT+CGG + chr7_2:49615388-49615407 None:intergenic 35.0%
!!! GAGAGCATTTCTAGCAATTT+TGG - chr7_2:49615400-49615419 Msa1060900:intron 35.0%
!!! AGCATTTCTAGCAATTTTGG+TGG - chr7_2:49615403-49615422 Msa1060900:intron 35.0%
!! TTTCTAGCAATTTTGGTGGA+AGG - chr7_2:49615407-49615426 Msa1060900:intron 35.0%
! ATGATTTTATCTCAAGGTGC+TGG - chr7_2:49615470-49615489 Msa1060900:intron 35.0%
! GCTTCATAAGATGTAGCTTT+TGG - chr7_2:49615497-49615516 Msa1060900:CDS 35.0%
!!! AAGATGTAGCTTTTGGAGTT+TGG - chr7_2:49615504-49615523 Msa1060900:CDS 35.0%
GTAGAAGTGAGAAAAACTCT+AGG + chr7_2:49615593-49615612 None:intergenic 35.0%
TTCTTGAAATTAGTAGTGCC+TGG - chr7_2:49615680-49615699 Msa1060900:CDS 35.0%
! TCTGGAACATAAAAACAACC+AGG + chr7_2:49615701-49615720 None:intergenic 35.0%
TAGTTGAAGTAACCAATGCT+TGG - chr7_2:49615755-49615774 Msa1060900:intron 35.0%
TTGACAAATAGACAGGATAG+TGG + chr7_2:49615829-49615848 None:intergenic 35.0%
!!! CAGTGTTTTGACAAATAGAC+AGG + chr7_2:49615836-49615855 None:intergenic 35.0%
CTGTCTATTTGTCAAAACAC+TGG - chr7_2:49615834-49615853 Msa1060900:intron 35.0%
TTCATACTATGAGGTCTACA+TGG - chr7_2:49615872-49615891 Msa1060900:intron 35.0%
!! CACTTGCTTTTAACTCTAAG+AGG + chr7_2:49615911-49615930 None:intergenic 35.0%
! AGCAAGTGAGATTTCAGTTT+TGG - chr7_2:49615923-49615942 Msa1060900:intron 35.0%
!!! TCAGTTTTGGATGACAAAGA+TGG - chr7_2:49615936-49615955 Msa1060900:intron 35.0%
TACAATGTCCGAATTTCAAG+AGG - chr7_2:49615998-49616017 Msa1060900:intron 35.0%
AAAACTGAACCTCATAGACT+TGG - chr7_2:49616154-49616173 Msa1060900:intron 35.0%
GTTTGATGTATTCCAAGCAA+CGG - chr7_2:49616208-49616227 Msa1060900:intron 35.0%
!! AATGCGTTTAAAGTTGATGC+AGG - chr7_2:49616239-49616258 Msa1060900:intron 35.0%
CAGGTAATGAAGACAATAGA+AGG - chr7_2:49616258-49616277 Msa1060900:intron 35.0%
AAGCTAAGATGCAATTCTCT+TGG + chr7_2:49616601-49616620 None:intergenic 35.0%
TTCCAATGTCTAGTCTAATG+CGG + chr7_2:49616671-49616690 None:intergenic 35.0%
ACTAGTTATGACACGAGTAA+TGG + chr7_2:49616795-49616814 None:intergenic 35.0%
TATGTGTGATTTCAGAATCC+AGG - chr7_2:49616864-49616883 Msa1060900:intron 35.0%
CATAAACTAGAGACACCAAA+AGG - chr7_2:49616963-49616982 Msa1060900:intron 35.0%
TTCTAGCCAAGCTTTCAATT+TGG + chr7_2:49617006-49617025 None:intergenic 35.0%
TACTTTCAATAGCTCAGTGA+AGG - chr7_2:49617130-49617149 Msa1060900:intron 35.0%
ACTTTCAATAGCTCAGTGAA+GGG - chr7_2:49617131-49617150 Msa1060900:intron 35.0%
! CAGTAGTATGTTGAGCTTTT+TGG + chr7_2:49617175-49617194 None:intergenic 35.0%
ATACTACTGAGAGGTAAGTA+TGG - chr7_2:49617186-49617205 Msa1060900:intron 35.0%
! TTTTCTCTTACTGTGTAAGC+AGG - chr7_2:49617270-49617289 Msa1060900:CDS 35.0%
TTTCTCTTACTGTGTAAGCA+GGG - chr7_2:49617271-49617290 Msa1060900:CDS 35.0%
TGCTTCTGATTCTAGCAAAA+AGG - chr7_2:49617334-49617353 Msa1060900:CDS 35.0%
! CAGGCATTATCAAAAGTACA+AGG - chr7_2:49617436-49617455 Msa1060900:CDS 35.0%
!! TGATTCTAGTGCTGCTTTAT+TGG + chr7_2:49617608-49617627 None:intergenic 35.0%
ATTTATCCAACTGTTCTGGT+TGG + chr7_2:49617748-49617767 None:intergenic 35.0%
TCAAAGACATAGTCTGAAGA+TGG + chr7_2:49618049-49618068 None:intergenic 35.0%
TTCAGACTATGTCTTTGACA+CGG - chr7_2:49618051-49618070 Msa1060900:intron 35.0%
AAGAAAGGGTTTCAGGAAAA+TGG - chr7_2:49618101-49618120 Msa1060900:intron 35.0%
! TATTAAGGCACCTTGAAAGA+AGG + chr7_2:49618354-49618373 None:intergenic 35.0%
!!! CTATTCTTTAGGGTCCATTT+TGG - chr7_2:49618487-49618506 Msa1060900:intron 35.0%
AAAACAACCATGTGCATGTT+TGG - chr7_2:49618560-49618579 Msa1060900:intron 35.0%
!! GCATTACCAAAAGCATTATG+AGG + chr7_2:49618939-49618958 None:intergenic 35.0%
!!! AGTGACCGTTTGTTTTGGTT+TGG + chr7_2:49614269-49614288 None:intergenic 40.0%
TGAAATTGAGGAGTGAGAGT+GGG + chr7_2:49614308-49614327 None:intergenic 40.0%
TTGAAATTGAGGAGTGAGAG+TGG + chr7_2:49614309-49614328 None:intergenic 40.0%
!! TATTGTTGGGGGTTTTTGGA+GGG + chr7_2:49614409-49614428 None:intergenic 40.0%
!! TTATTGTTGGGGGTTTTTGG+AGG + chr7_2:49614410-49614429 None:intergenic 40.0%
! AATGGGGTTGTTATTGTTGG+GGG + chr7_2:49614420-49614439 None:intergenic 40.0%
CCTTACCTTGGAAACTGAAA+TGG + chr7_2:49614438-49614457 None:intergenic 40.0%
CCATTTCAGTTTCCAAGGTA+AGG - chr7_2:49614435-49614454 Msa1060900:three_prime_UTR 40.0%
CAAGGTAAGGGTCATAGTTA+GGG - chr7_2:49614448-49614467 Msa1060900:three_prime_UTR 40.0%
TGGGTCATCACAATTTCTTG+TGG + chr7_2:49614498-49614517 None:intergenic 40.0%
AGAAGTTAGTCCGATGATAC+CGG - chr7_2:49614785-49614804 Msa1060900:CDS 40.0%
! GTAAGTTTAAGTTCAGAGGG+TGG - chr7_2:49615126-49615145 Msa1060900:intron 40.0%
TCCTTTGGCTATGCACAATT+TGG - chr7_2:49615309-49615328 Msa1060900:intron 40.0%
TATTAGGGATGTAGTAGCTG+TGG - chr7_2:49615544-49615563 Msa1060900:CDS 40.0%
TGTAGTAGCTGTGGTGTAAT+TGG - chr7_2:49615553-49615572 Msa1060900:CDS 40.0%
! ACTCTAAGAGGTCGTAACAT+CGG + chr7_2:49615899-49615918 None:intergenic 40.0%
GGAGAAGACCTCTTGAAATT+CGG + chr7_2:49616009-49616028 None:intergenic 40.0%
AATAGAAGGAGCTGCAATGA+AGG - chr7_2:49616272-49616291 Msa1060900:intron 40.0%
ATAGAAGGAGCTGCAATGAA+GGG - chr7_2:49616273-49616292 Msa1060900:intron 40.0%
CACATTTGACAGTGCAAACA+AGG + chr7_2:49616333-49616352 None:intergenic 40.0%
ACAAACCAAGAACACCCTAT+AGG - chr7_2:49616372-49616391 Msa1060900:intron 40.0%
CAAACCAAGAACACCCTATA+GGG - chr7_2:49616373-49616392 Msa1060900:intron 40.0%
!! GTCAATTTGCTGTCCCTATA+GGG + chr7_2:49616389-49616408 None:intergenic 40.0%
CAAATTGACCCGTATATTGC+AGG - chr7_2:49616400-49616419 Msa1060900:intron 40.0%
TAGAGAGTCCTGCAATATAC+GGG + chr7_2:49616411-49616430 None:intergenic 40.0%
CTAGAGAGTCCTGCAATATA+CGG + chr7_2:49616412-49616431 None:intergenic 40.0%
GTATATTGCAGGACTCTCTA+GGG - chr7_2:49616411-49616430 Msa1060900:intron 40.0%
TATATTGCAGGACTCTCTAG+GGG - chr7_2:49616412-49616431 Msa1060900:intron 40.0%
! AACTTATAGCTTTACCAGGC+AGG + chr7_2:49616462-49616481 None:intergenic 40.0%
CATGACAAGAAAGAGCTTGA+GGG - chr7_2:49616531-49616550 Msa1060900:CDS 40.0%
ATGACAAGAAAGAGCTTGAG+GGG - chr7_2:49616532-49616551 Msa1060900:CDS 40.0%
GGGGGTGATATATAAGTTGT+AGG - chr7_2:49616551-49616570 Msa1060900:CDS 40.0%
TCCAATGTCTAGTCTAATGC+GGG + chr7_2:49616670-49616689 None:intergenic 40.0%
ATTGGAAACGTCAACAACTG+TGG - chr7_2:49616684-49616703 Msa1060900:CDS 40.0%
TCAGAATCCAGGAGAATATC+AGG - chr7_2:49616875-49616894 Msa1060900:intron 40.0%
ACAGATTCCTGATATTCTCC+TGG + chr7_2:49616885-49616904 None:intergenic 40.0%
! GTCTCTAGTTTATGAGCTGA+AGG + chr7_2:49616957-49616976 None:intergenic 40.0%
ACCAAAAGGTAACGTTGACA+TGG - chr7_2:49616977-49616996 Msa1060900:intron 40.0%
! TCCATGTCAACGTTACCTTT+TGG + chr7_2:49616981-49617000 None:intergenic 40.0%
TGGAAGCCAAATTGAAAGCT+TGG - chr7_2:49616997-49617016 Msa1060900:intron 40.0%
AAAGCTTGGCTAGAATCAAG+AGG - chr7_2:49617011-49617030 Msa1060900:intron 40.0%
AAGAGCTCACAACAAAGACT+TGG - chr7_2:49617041-49617060 Msa1060900:intron 40.0%
AAGCTCAACATACTACTGAG+AGG - chr7_2:49617177-49617196 Msa1060900:intron 40.0%
GCTATGTAGAACATGCATTC+TGG - chr7_2:49617544-49617563 Msa1060900:CDS 40.0%
TAAGAGAGAGACTGAACATG+AGG - chr7_2:49617582-49617601 Msa1060900:CDS 40.0%
CACACAAGTAATGACATACC+AGG + chr7_2:49617643-49617662 None:intergenic 40.0%
TCGAATAAATGCAGAGTGCA+GGG + chr7_2:49617668-49617687 None:intergenic 40.0%
ATCGAATAAATGCAGAGTGC+AGG + chr7_2:49617669-49617688 None:intergenic 40.0%
GTAAATGCATTCACCGTTGT+TGG - chr7_2:49617722-49617741 Msa1060900:CDS 40.0%
! CAGTTTCGATTTACTGACTG+CGG - chr7_2:49617824-49617843 Msa1060900:CDS 40.0%
CAATGTATGTGACCACAGTT+CGG + chr7_2:49617870-49617889 None:intergenic 40.0%
! AATGGACTTTGTAGTACTGC+TGG + chr7_2:49617984-49618003 None:intergenic 40.0%
! GGAGAGAGAGCTTTTCTTAA+TGG + chr7_2:49618002-49618021 None:intergenic 40.0%
TTCCTGAAACCCTTTCTTAG+TGG + chr7_2:49618099-49618118 None:intergenic 40.0%
TGCAAGAAGTTCTGCTTTGA+AGG - chr7_2:49618145-49618164 Msa1060900:intron 40.0%
ACTCAGTGAACCTTCTTTCA+AGG - chr7_2:49618341-49618360 Msa1060900:intron 40.0%
AGAGGAGCTACTAGAGTTAA+AGG - chr7_2:49618395-49618414 Msa1060900:intron 40.0%
GTTTGGATTGACGATGAGAT+TGG - chr7_2:49618577-49618596 Msa1060900:intron 40.0%
CGATGAGATTGGAAGAATCA+CGG - chr7_2:49618588-49618607 Msa1060900:intron 40.0%
ATTGTATTCCTTCAGGGCAT+AGG - chr7_2:49618811-49618830 Msa1060900:CDS 40.0%
!! TTAGTGGACTTTCTTCTCTG+AGG + chr7_2:49618864-49618883 None:intergenic 40.0%
TTAACTGACCTGGAGAAGAT+TGG - chr7_2:49618979-49618998 Msa1060900:intron 40.0%
ACTTGTACTACTTGTTTGGC+AGG - chr7_2:49619097-49619116 Msa1060900:CDS 40.0%
!! ATTGTTGGGGGTTTTTGGAG+GGG + chr7_2:49614408-49614427 None:intergenic 45.0%
CAACCCCATTTCAGTTTCCA+AGG - chr7_2:49614430-49614449 Msa1060900:three_prime_UTR 45.0%
CCTAACTATGACCCTTACCT+TGG + chr7_2:49614450-49614469 None:intergenic 45.0%
CCAAGGTAAGGGTCATAGTT+AGG - chr7_2:49614447-49614466 Msa1060900:three_prime_UTR 45.0%
TTCTTGTGGTTTCGTGAGAG+AGG + chr7_2:49614484-49614503 None:intergenic 45.0%
ATCTCAAAGACCCACTTACC+AGG - chr7_2:49614576-49614595 Msa1060900:intron 45.0%
TCGGAACGAGTGTTACAAGT+TGG - chr7_2:49614713-49614732 Msa1060900:intron 45.0%
TTACATCCACCGAATACAGC+CGG + chr7_2:49614807-49614826 None:intergenic 45.0%
!! GTGTTTGCTTATGGTGCTAC+TGG - chr7_2:49614834-49614853 Msa1060900:intron 45.0%
AAAGTGAACGAACCCACCTT+TGG - chr7_2:49615068-49615087 Msa1060900:intron 45.0%
! TTTAAGTTCAGAGGGTGGTG+AGG - chr7_2:49615131-49615150 Msa1060900:intron 45.0%
GCCAAATTGTGCATAGCCAA+AGG + chr7_2:49615313-49615332 None:intergenic 45.0%
! ACAATTTGGCTCAGCTCAGA+TGG - chr7_2:49615323-49615342 Msa1060900:intron 45.0%
GCTCAGATGGTTATAGCCAT+AGG - chr7_2:49615336-49615355 Msa1060900:intron 45.0%
!! CTAGCAATTTTGGTGGAAGG+AGG - chr7_2:49615410-49615429 Msa1060900:intron 45.0%
!! TAACCAATGCTTGGTGTTGC+AGG - chr7_2:49615764-49615783 Msa1060900:intron 45.0%
!! AACCAATGCTTGGTGTTGCA+GGG - chr7_2:49615765-49615784 Msa1060900:intron 45.0%
!! AGGATAGTGGACATTGCCAA+CGG + chr7_2:49615816-49615835 None:intergenic 45.0%
AAGATGGCCATATTCACCTC+AGG - chr7_2:49615952-49615971 Msa1060900:intron 45.0%
AGATGGCCATATTCACCTCA+GGG - chr7_2:49615953-49615972 Msa1060900:intron 45.0%
ATAGTCCCCTGAGGTGAATA+TGG + chr7_2:49615962-49615981 None:intergenic 45.0%
TTTCAAGAGGTCTTCTCCAG+TGG - chr7_2:49616011-49616030 Msa1060900:intron 45.0%
TCTTCTCCAGTGGTATTCAG+AGG - chr7_2:49616021-49616040 Msa1060900:CDS 45.0%
TCCTGCTTGATACGTCATTG+AGG + chr7_2:49616067-49616086 None:intergenic 45.0%
!! TACTATCGACTCCTCCTGAT+GGG - chr7_2:49616111-49616130 Msa1060900:intron 45.0%
ACAAGACTTCCATTCCCATC+AGG + chr7_2:49616128-49616147 None:intergenic 45.0%
! GGGAATGGAAGTCTTGTATG+TGG - chr7_2:49616131-49616150 Msa1060900:intron 45.0%
AGGTTACCGTCCACTCAATT+GGG - chr7_2:49616178-49616197 Msa1060900:intron 45.0%
CATTACCCCAATTGAGTGGA+CGG + chr7_2:49616187-49616206 None:intergenic 45.0%
GTCCACTCAATTGGGGTAAT+GGG - chr7_2:49616186-49616205 Msa1060900:intron 45.0%
AACCCATTACCCCAATTGAG+TGG + chr7_2:49616191-49616210 None:intergenic 45.0%
GATGTATTCCAAGCAACGGA+AGG - chr7_2:49616212-49616231 Msa1060900:intron 45.0%
CATTATGTCCTTCCGTTGCT+TGG + chr7_2:49616223-49616242 None:intergenic 45.0%
!! GGTCAATTTGCTGTCCCTAT+AGG + chr7_2:49616390-49616409 None:intergenic 45.0%
CGTATATTGCAGGACTCTCT+AGG - chr7_2:49616410-49616429 Msa1060900:intron 45.0%
ATATTGCAGGACTCTCTAGG+GGG - chr7_2:49616413-49616432 Msa1060900:intron 45.0%
GCATGACAAGAAAGAGCTTG+AGG - chr7_2:49616530-49616549 Msa1060900:CDS 45.0%
TGACAAGAAAGAGCTTGAGG+GGG - chr7_2:49616533-49616552 Msa1060900:CDS 45.0%
AATGTCTAGTCTAATGCGGG+TGG + chr7_2:49616667-49616686 None:intergenic 45.0%
ACCCGCATTAGACTAGACAT+TGG - chr7_2:49616666-49616685 Msa1060900:CDS 45.0%
! TTAGTTTGGCTGCTCGATCA+AGG - chr7_2:49616913-49616932 Msa1060900:intron 45.0%
CCAGTTGTGCAAAAAACTCC+CGG - chr7_2:49617077-49617096 Msa1060900:intron 45.0%
TGATCTCCTAGCAGAGCTAA+TGG + chr7_2:49617108-49617127 None:intergenic 45.0%
TTCAATAGCTCAGTGAAGGG+TGG - chr7_2:49617134-49617153 Msa1060900:intron 45.0%
! GAACATGCATTCTGGTGTTG+AGG - chr7_2:49617552-49617571 Msa1060900:CDS 45.0%
TGGTACTATGATCCGAACTG+TGG - chr7_2:49617855-49617874 Msa1060900:CDS 45.0%
GCTGGCACATCTTTGCTTAA+TGG + chr7_2:49617966-49617985 None:intergenic 45.0%
CTCTCTCCCATCAACATCAA+TGG - chr7_2:49618014-49618033 Msa1060900:intron 45.0%
CAACCTGCTCCACTAAGAAA+GGG - chr7_2:49618087-49618106 Msa1060900:intron 45.0%
AAACCCTTTCTTAGTGGAGC+AGG + chr7_2:49618093-49618112 None:intergenic 45.0%
CTCCACTAAGAAAGGGTTTC+AGG - chr7_2:49618094-49618113 Msa1060900:intron 45.0%
CTTGCACTGAATTTGTCCAG+TGG + chr7_2:49618131-49618150 None:intergenic 45.0%
CGTCAATCCAAACATGCACA+TGG + chr7_2:49618570-49618589 None:intergenic 45.0%
GTTTGGATGAGCAGTGAGTT+TGG + chr7_2:49618674-49618693 None:intergenic 45.0%
! TTTTGTCTCCTATGCCCTGA+AGG + chr7_2:49618822-49618841 None:intergenic 45.0%
TCAGGGCATAGGAGACAAAA+TGG - chr7_2:49618822-49618841 Msa1060900:CDS 45.0%
CATGTTGCAGTTAACTGACC+TGG - chr7_2:49618969-49618988 Msa1060900:intron 45.0%
TAGAGAGACCAATCTTCTCC+AGG + chr7_2:49618990-49619009 None:intergenic 45.0%
!! GATTGGTCTCTCTATGAAGC+AGG - chr7_2:49618996-49619015 Msa1060900:intron 45.0%
GTGGTTTCGTGAGAGAGGAA+GGG + chr7_2:49614479-49614498 None:intergenic 50.0%
TGTGGTTTCGTGAGAGAGGA+AGG + chr7_2:49614480-49614499 None:intergenic 50.0%
CCGAATACAGCCGGTATCAT+CGG + chr7_2:49614798-49614817 None:intergenic 50.0%
! CCGATGATACCGGCTGTATT+CGG - chr7_2:49614795-49614814 Msa1060900:CDS 50.0%
! ATGATACCGGCTGTATTCGG+TGG - chr7_2:49614798-49614817 Msa1060900:CDS 50.0%
!! GCTTATGGTGCTACTGGAAG+TGG - chr7_2:49614840-49614859 Msa1060900:intron 50.0%
TTCCCTGCAACACCAAGCAT+TGG + chr7_2:49615770-49615789 None:intergenic 50.0%
CAGGGAACTGAAGAACAACC+TGG - chr7_2:49615783-49615802 Msa1060900:intron 50.0%
GATGGCCATATTCACCTCAG+GGG - chr7_2:49615954-49615973 Msa1060900:intron 50.0%
GAACTTGAGATAGTCCCCTG+AGG + chr7_2:49615971-49615990 None:intergenic 50.0%
TTTGCGCCTCTGAATACCAC+TGG + chr7_2:49616030-49616049 None:intergenic 50.0%
GCCTCAATGACGTATCAAGC+AGG - chr7_2:49616063-49616082 Msa1060900:CDS 50.0%
GACGTATCAAGCAGGAGTCA+TGG - chr7_2:49616071-49616090 Msa1060900:CDS 50.0%
!! GTACTATCGACTCCTCCTGA+TGG - chr7_2:49616110-49616129 Msa1060900:intron 50.0%
AGACTTCCATTCCCATCAGG+AGG + chr7_2:49616125-49616144 None:intergenic 50.0%
CTGAACCTCATAGACTTGGC+AGG - chr7_2:49616158-49616177 Msa1060900:intron 50.0%
GGTAACCTGCCAAGTCTATG+AGG + chr7_2:49616166-49616185 None:intergenic 50.0%
CAGGTTACCGTCCACTCAAT+TGG - chr7_2:49616177-49616196 Msa1060900:intron 50.0%
GGTTACCGTCCACTCAATTG+GGG - chr7_2:49616179-49616198 Msa1060900:intron 50.0%
CGTCCACTCAATTGGGGTAA+TGG - chr7_2:49616185-49616204 Msa1060900:intron 50.0%
! CTGTCCCTATAGGGTGTTCT+TGG + chr7_2:49616380-49616399 None:intergenic 50.0%
!!! CCGGGAGTTTTTTGCACAAC+TGG + chr7_2:49617080-49617099 None:intergenic 50.0%
! AGCAGAGCTAATGGTGGAAC+CGG + chr7_2:49617099-49617118 None:intergenic 50.0%
!! GTTCCACCATTAGCTCTGCT+AGG - chr7_2:49617099-49617118 Msa1060900:intron 50.0%
TCTCCTAGCAGAGCTAATGG+TGG + chr7_2:49617105-49617124 None:intergenic 50.0%
TACTGTGTAAGCAGGGCCTT+TGG - chr7_2:49617278-49617297 Msa1060900:CDS 50.0%
! CTGTTCTGGTTGGCCAACAA+CGG + chr7_2:49617738-49617757 None:intergenic 50.0%
TGTTGGCCAACCAGAACAGT+TGG - chr7_2:49617739-49617758 Msa1060900:CDS 50.0%
! TACTGACTGCGGTGAATGTG+TGG - chr7_2:49617835-49617854 Msa1060900:CDS 50.0%
GTGGAGCAGGTTGCAGAAAA+AGG + chr7_2:49618080-49618099 None:intergenic 50.0%
GCAACCTGCTCCACTAAGAA+AGG - chr7_2:49618086-49618105 Msa1060900:intron 50.0%
TCAGGAAAATGGCACTCCAC+TGG - chr7_2:49618112-49618131 Msa1060900:intron 50.0%
TTGAGGAGTGAGAGTGGGAG+AGG + chr7_2:49614303-49614322 None:intergenic 55.0%
! ACAACCTGGCTTGATGCCGT+TGG - chr7_2:49615797-49615816 Msa1060900:intron 55.0%
ATTGCCAACGGCATCAAGCC+AGG + chr7_2:49615804-49615823 None:intergenic 55.0%
AGGCGCAAAACTGCACACAC+AGG - chr7_2:49616041-49616060 Msa1060900:CDS 55.0%
TCGACTCCTCCTGATGGGAA+TGG - chr7_2:49616116-49616135 Msa1060900:intron 55.0%
TACCAGGCAGGCAACCATGA+GGG + chr7_2:49616450-49616469 None:intergenic 55.0%
TTACCAGGCAGGCAACCATG+AGG + chr7_2:49616451-49616470 None:intergenic 55.0%
! GCAGAGCTAATGGTGGAACC+GGG + chr7_2:49617098-49617117 None:intergenic 55.0%
GGGATCTAGTCGTGCCCTCA+TGG - chr7_2:49616433-49616452 Msa1060900:intron 60.0%
TGCCCTCATGGTTGCCTGCC+TGG - chr7_2:49616445-49616464 Msa1060900:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 49614235 49619427 49614235 ID=Msa1060900;Name=Msa1060900
chr7_2 mRNA 49614235 49619427 49614235 ID=Msa1060900-mRNA-1;Parent=Msa1060900;Name=Msa1060900-mRNA-1;_AED=0.07;_eAED=0.07;_QI=142|1|1|1|1|1|12|237|665
chr7_2 exon 49614235 49614543 49614235 ID=Msa1060900-mRNA-1:exon:8983;Parent=Msa1060900-mRNA-1
chr7_2 exon 49614645 49614683 49614645 ID=Msa1060900-mRNA-1:exon:8982;Parent=Msa1060900-mRNA-1
chr7_2 exon 49614774 49614836 49614774 ID=Msa1060900-mRNA-1:exon:8981;Parent=Msa1060900-mRNA-1
chr7_2 exon 49615246 49615267 49615246 ID=Msa1060900-mRNA-1:exon:8980;Parent=Msa1060900-mRNA-1
chr7_2 exon 49615366 49615412 49615366 ID=Msa1060900-mRNA-1:exon:8979;Parent=Msa1060900-mRNA-1
chr7_2 exon 49615496 49615704 49615496 ID=Msa1060900-mRNA-1:exon:8978;Parent=Msa1060900-mRNA-1
chr7_2 exon 49616019 49616109 49616019 ID=Msa1060900-mRNA-1:exon:8977;Parent=Msa1060900-mRNA-1
chr7_2 exon 49616307 49616370 49616307 ID=Msa1060900-mRNA-1:exon:8976;Parent=Msa1060900-mRNA-1
chr7_2 exon 49616464 49616783 49616464 ID=Msa1060900-mRNA-1:exon:8975;Parent=Msa1060900-mRNA-1
chr7_2 exon 49617196 49617876 49617196 ID=Msa1060900-mRNA-1:exon:8974;Parent=Msa1060900-mRNA-1
chr7_2 exon 49618781 49618949 49618781 ID=Msa1060900-mRNA-1:exon:8973;Parent=Msa1060900-mRNA-1
chr7_2 exon 49619065 49619427 49619065 ID=Msa1060900-mRNA-1:exon:8972;Parent=Msa1060900-mRNA-1
chr7_2 five_prime_UTR 49619286 49619427 49619286 ID=Msa1060900-mRNA-1:five_prime_utr;Parent=Msa1060900-mRNA-1
chr7_2 CDS 49619065 49619285 49619065 ID=Msa1060900-mRNA-1:cds;Parent=Msa1060900-mRNA-1
chr7_2 CDS 49618781 49618949 49618781 ID=Msa1060900-mRNA-1:cds;Parent=Msa1060900-mRNA-1
chr7_2 CDS 49617196 49617876 49617196 ID=Msa1060900-mRNA-1:cds;Parent=Msa1060900-mRNA-1
chr7_2 CDS 49616464 49616783 49616464 ID=Msa1060900-mRNA-1:cds;Parent=Msa1060900-mRNA-1
chr7_2 CDS 49616307 49616370 49616307 ID=Msa1060900-mRNA-1:cds;Parent=Msa1060900-mRNA-1
chr7_2 CDS 49616019 49616109 49616019 ID=Msa1060900-mRNA-1:cds;Parent=Msa1060900-mRNA-1
chr7_2 CDS 49615496 49615704 49615496 ID=Msa1060900-mRNA-1:cds;Parent=Msa1060900-mRNA-1
chr7_2 CDS 49615366 49615412 49615366 ID=Msa1060900-mRNA-1:cds;Parent=Msa1060900-mRNA-1
chr7_2 CDS 49615246 49615267 49615246 ID=Msa1060900-mRNA-1:cds;Parent=Msa1060900-mRNA-1
chr7_2 CDS 49614774 49614836 49614774 ID=Msa1060900-mRNA-1:cds;Parent=Msa1060900-mRNA-1
chr7_2 CDS 49614645 49614683 49614645 ID=Msa1060900-mRNA-1:cds;Parent=Msa1060900-mRNA-1
chr7_2 CDS 49614472 49614543 49614472 ID=Msa1060900-mRNA-1:cds;Parent=Msa1060900-mRNA-1
chr7_2 three_prime_UTR 49614235 49614471 49614235 ID=Msa1060900-mRNA-1:three_prime_utr;Parent=Msa1060900-mRNA-1
Gene Sequence

>Msa1060900

ATGGCTACTACTCTTAATTACTCAAGCACCCCTCCAAAAACCCCCAACAATAACAACCCCATTTCAGTTTCCAAGGTAAGGGTCATAGTTAGGGTTAGACCCTTCCTCTCTCACGAAACCACAAGAAATTGTGATGACCCAGTTTCTTGTATCTCACTTTTAGATCAAGATTTTCAATCCCAAAATGATGTAGCAGTTTATCTCAAAGACCCACTTACCAGTCGGAACGAGTGTTACAAGTTGGATTCTTTCTTTGATCAAGAGGATAACAATGTGGGACAGATATTTGAGAGAGAAGTTAGTCCGATGATACCGGCTGTATTCGGTGGATGTAATGCTACTGTGTTTGCTTATGGTGCTACTGGAAGTGGAAAGACATATACTATGCAGGGAACTGAAGAACAACCTGGCTTGATGCCGTTGGCAATGTCCACTATCCTGTCTATTTGTCAAAACACTGGTAGCACAGCTCAAATTTCATACTATGAGGTCTACATGGACCGATGTTACGACCTCTTAGAGTTAAAAGCAAGTGAGATTTCAGTTTTGGATGACAAAGATGGCCATATTCACCTCAGGGGACTATCTCAAGTTCCTGTAAATACAATGTCCGAATTTCAAGAGGTCTTCTCCAGTGGTATTCAGAGGCGCAAAACTGCACACACAGGCCTCAATGACGTATCAAGCAGGAGTCATGGAGTGCTTGTGATATCTGTACTATCGACTCCTCCTGATGGGAATGGAAGTCTTGTATGTGGAAAACTGAACCTCATAGACTTGGCAGGTTACCGTCCACTCAATTGGGGTAATGGGTTTGATGTATTCCAAGCAACGGAAGGACATAATGCGTTTAAAGTTGATGCAGGTAATGAAGACAATAGAAGGAGCTGCAATGAAGGGATTCGTCTTCAAGAGAGTGCTAAGATAAATCAGTCCTTGTTTGCACTGTCAAATGTGATATATGCGTTGAACAACAACAAACCAAGAACACCCTATAGGGACAGCAAATTGACCCGTATATTGCAGGACTCTCTAGGGGGATCTAGTCGTGCCCTCATGGTTGCCTGCCTGAATCCAGGAGAATATCAGGAATCTGTTCATACTGTTAGTTTGGCTGCTCGATCAAGGCACGTCTCTAATTTTGTACCTTCAGCTCATAAACTAGAGACACCAAAAGGTAACGTTGACATGGAAGCCAAATTGAAAGCTTGGCTAGAATCAAGAGGTAAGACAAAGAGCTCACAACAAAGACTTGGAGCATTTAATTCTCCAGTTGTGCAAAAAACTCCCGGTTCCACCATTAGCTCTGCTAGGAGATCAGTTACTTTCAATAGCTCAGTGAAGGGTGGCAGAACTTTCATCAACCAAAAAGCTCAACATACTACTGAGAGGGCCTTTGGTGTCTCTTTTAGAAATTTACTAGATGGTGAAGTTGCTTCTGATTCTAGCAAAAAGAACATGCATTCTGGTGTTGAGGACAATGATAAGAGAGAGACTGAACATGAGGCCAATAAAGCAGCACTAGAATCATATAATGATGTACCTGATGAACCATTAAGCAAAGATGTGCCAGCAGTACTACAAAGTCCATTAAGAAAAGCTCTCTCTCCCATCAACATCAATGGTATTCAAAACCATCTTCAGACTATGTCTTTGACACGGACACCTTTTTCTGCAACCTGCTCCACTAAGAAAGGGTTTCAGGAAAATGGCACTCCACTGGACAAATTCAGTGCAAGAAGTTCTGCTTTGAAGAACTGTCTAGTTCAAGAATACATTGATTTGTTAAATAATGCAAGCAGAGAGGAGCTACTAGAGTTAAAGGGCATAGGAGACAAAATGGCAGATTACATCATAGACCTCAGAGAAGAAAGTCCACTAAAATCGTTAACTGACCTGGAGAAGATTGGTCTCTCTATGAAGCAGGCTCATAACCTTTTCACTAAAGCTGCAAAAAAACTCTTTGATGACAAAGCAGAAGATTCAATACTCAATTGA

Protein sequence

>Msa1060900

MATTLNYSSTPPKTPNNNNPISVSKVRVIVRVRPFLSHETTRNCDDPVSCISLLDQDFQSQNDVAVYLKDPLTSRNECYKLDSFFDQEDNNVGQIFEREVSPMIPAVFGGCNATVFAYGATGSGKTYTMQGTEEQPGLMPLAMSTILSICQNTGSTAQISYYEVYMDRCYDLLELKASEISVLDDKDGHIHLRGLSQVPVNTMSEFQEVFSSGIQRRKTAHTGLNDVSSRSHGVLVISVLSTPPDGNGSLVCGKLNLIDLAGYRPLNWGNGFDVFQATEGHNAFKVDAGNEDNRRSCNEGIRLQESAKINQSLFALSNVIYALNNNKPRTPYRDSKLTRILQDSLGGSSRALMVACLNPGEYQESVHTVSLAARSRHVSNFVPSAHKLETPKGNVDMEAKLKAWLESRGKTKSSQQRLGAFNSPVVQKTPGSTISSARRSVTFNSSVKGGRTFINQKAQHTTERAFGVSFRNLLDGEVASDSSKKNMHSGVEDNDKRETEHEANKAALESYNDVPDEPLSKDVPAVLQSPLRKALSPININGIQNHLQTMSLTRTPFSATCSTKKGFQENGTPLDKFSARSSALKNCLVQEYIDLLNNASREELLELKGIGDKMADYIIDLREESPLKSLTDLEKIGLSMKQAHNLFTKAAKKLFDDKAEDSILN*