Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254290 | XP_013464515.1 | 94.813 | 482 | 2 | 1 | 1 | 482 | 501 | 959 | 0.0 | 939 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254290 | sp|Q9SYM4|TPS1_ARATH | 65.182 | 494 | 130 | 6 | 1 | 479 | 470 | 936 | 0.0 | 629 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254290 | A0A072VK67 | 94.813 | 482 | 2 | 1 | 1 | 482 | 501 | 959 | 0.0 | 939 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0165430 | Msa0254290 | 0.814732 | 1.326108e-51 | -8.615850e-47 |
| Msa0168100 | Msa0254290 | 0.803511 | 3.366929e-49 | -8.615850e-47 |
| Msa0217400 | Msa0254290 | 0.805155 | 1.530202e-49 | -8.615850e-47 |
| Msa0254290 | Msa0257250 | 0.815193 | 1.047790e-51 | -8.615850e-47 |
| Msa0254290 | Msa0293480 | 0.854727 | 1.015311e-61 | -8.615850e-47 |
| Msa0254290 | Msa0294950 | 0.801288 | 9.665961e-49 | -8.615850e-47 |
| Msa0254290 | Msa0304740 | 0.817880 | 2.621439e-52 | -8.615850e-47 |
| Msa0254290 | Msa0331590 | 0.811898 | 5.559880e-51 | -8.615850e-47 |
| Msa0254290 | Msa0333720 | -0.802456 | 5.562609e-49 | -8.615850e-47 |
| Msa0254290 | Msa0335040 | 0.809965 | 1.457621e-50 | -8.615850e-47 |
| Msa0254290 | Msa0463460 | 0.820545 | 6.481148e-53 | -8.615850e-47 |
| Msa0254290 | Msa0638280 | 0.809963 | 1.459160e-50 | -8.615850e-47 |
| Msa0254290 | Msa0638320 | 0.806231 | 9.094031e-50 | -8.615850e-47 |
| Msa0254290 | Msa0657670 | 0.806148 | 9.469828e-50 | -8.615850e-47 |
| Msa0254290 | Msa0658570 | 0.803343 | 3.648208e-49 | -8.615850e-47 |
| Msa0254290 | Msa0703490 | 0.809023 | 2.322666e-50 | -8.615850e-47 |
| Msa0254290 | Msa0715310 | 0.806681 | 7.310078e-50 | -8.615850e-47 |
| Msa0254290 | Msa0722930 | 0.809853 | 1.541120e-50 | -8.615850e-47 |
| Msa0254290 | Msa0723140 | 0.806233 | 9.087389e-50 | -8.615850e-47 |
| Msa0254290 | Msa0756630 | -0.812038 | 5.183070e-51 | -8.615850e-47 |
| Msa0254290 | Msa0757180 | 0.802361 | 5.818243e-49 | -8.615850e-47 |
| Msa0254290 | Msa0782970 | 0.801409 | 9.129752e-49 | -8.615850e-47 |
| Msa0254290 | Msa0792510 | 0.803665 | 3.128583e-49 | -8.615850e-47 |
| Msa0254290 | Msa0825620 | 0.803012 | 4.271195e-49 | -8.615850e-47 |
| Msa0254290 | Msa0827620 | -0.811956 | 5.402136e-51 | -8.615850e-47 |
| Msa0254290 | Msa0851060 | -0.810281 | 1.246177e-50 | -8.615850e-47 |
| Msa0254290 | Msa0946120 | 0.816410 | 5.609674e-52 | -8.615850e-47 |
| Msa0254290 | Msa0961420 | -0.819380 | 1.197217e-52 | -8.615850e-47 |
| Msa0254290 | Msa1008490 | 0.831340 | 1.764181e-55 | -8.615850e-47 |
| Msa0254290 | Msa1019020 | 0.812406 | 4.308808e-51 | -8.615850e-47 |
| Msa0254290 | Msa1036390 | 0.826199 | 3.092856e-54 | -8.615850e-47 |
| Msa0254290 | Msa1040120 | 0.840916 | 6.518714e-58 | -8.615850e-47 |
| Msa0254290 | Msa1076680 | 0.819795 | 9.627380e-53 | -8.615850e-47 |
| Msa0254290 | Msa1083410 | 0.829681 | 4.493086e-55 | -8.615850e-47 |
| Msa0254290 | Msa1098560 | 0.822442 | 2.363173e-53 | -8.615850e-47 |
| Msa0254290 | Msa1104000 | 0.804314 | 2.292095e-49 | -8.615850e-47 |
| Msa0254290 | Msa1128160 | 0.839566 | 1.467712e-57 | -8.615850e-47 |
| Msa0254290 | Msa1147570 | 0.817880 | 2.621437e-52 | -8.615850e-47 |
| Msa0254290 | Msa1165360 | 0.837172 | 6.079454e-57 | -8.615850e-47 |
| Msa0254290 | Msa1206020 | 0.805317 | 1.414877e-49 | -8.615850e-47 |
| Msa0254290 | Msa1222970 | 0.813012 | 3.174556e-51 | -8.615850e-47 |
| Msa0254290 | Msa1228210 | 0.839558 | 1.475136e-57 | -8.615850e-47 |
| Msa0254290 | Msa1261470 | 0.808616 | 2.836951e-50 | -8.615850e-47 |
| Msa0254290 | Msa1264020 | 0.810028 | 1.412654e-50 | -8.615850e-47 |
| Msa0254290 | Msa1271280 | 0.845599 | 3.672174e-59 | -8.615850e-47 |
| Msa0254290 | Msa1271290 | 0.800690 | 1.280474e-48 | -8.615850e-47 |
| Msa0254290 | Msa1271300 | 0.839898 | 1.203152e-57 | -8.615850e-47 |
| Msa0254290 | Msa1304180 | 0.808441 | 3.092484e-50 | -8.615850e-47 |
| Msa0254290 | Msa1308380 | 0.803779 | 2.961829e-49 | -8.615850e-47 |
| Msa0254290 | Msa1335770 | 0.816997 | 4.143570e-52 | -8.615850e-47 |
| Msa0254290 | Msa1373950 | 0.803491 | 3.399434e-49 | -8.615850e-47 |
| Msa0254290 | Msa1376890 | 0.800915 | 1.151675e-48 | -8.615850e-47 |
| Msa0254290 | Msa1384350 | 0.806563 | 7.741196e-50 | -8.615850e-47 |
| Msa0254290 | Msa1408790 | 0.807893 | 4.045248e-50 | -8.615850e-47 |
| Msa0254290 | Msa1436040 | 0.808245 | 3.405086e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254290 | MtrunA17_Chr2g0314621 | 94.606 | 482 | 2 | 2 | 1 | 482 | 501 | 958 | 0.0 | 932 |
| Msa0254290 | MtrunA17_Chr8g0359371 | 71.488 | 484 | 107 | 6 | 1 | 479 | 462 | 919 | 0.0 | 689 |
| Msa0254290 | MtrunA17_Chr8g0380061 | 60.692 | 491 | 150 | 8 | 1 | 482 | 61 | 517 | 0.0 | 582 |
| Msa0254290 | MtrunA17_Chr1g0161531 | 31.026 | 390 | 198 | 14 | 1 | 358 | 450 | 800 | 2.33e-45 | 169 |
| Msa0254290 | MtrunA17_Chr4g0041381 | 29.124 | 388 | 208 | 12 | 1 | 359 | 450 | 799 | 4.82e-44 | 166 |
| Msa0254290 | MtrunA17_Chr8g0364961 | 30.077 | 389 | 203 | 12 | 1 | 358 | 437 | 787 | 6.07e-44 | 165 |
| Msa0254290 | MtrunA17_Chr1g0209251 | 29.974 | 387 | 204 | 11 | 1 | 357 | 443 | 792 | 1.77e-43 | 164 |
| Msa0254290 | MtrunA17_Chr4g0073041 | 29.306 | 389 | 205 | 12 | 1 | 358 | 443 | 792 | 2.06e-43 | 164 |
| Msa0254290 | MtrunA17_Chr8g0391971 | 29.381 | 388 | 206 | 13 | 1 | 358 | 450 | 799 | 3.52e-40 | 154 |
| Msa0254290 | MtrunA17_Chr3g0117891 | 28.021 | 389 | 211 | 13 | 1 | 358 | 362 | 712 | 9.21e-40 | 153 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0254290 | AT1G78580.4 | 65.182 | 494 | 130 | 6 | 1 | 479 | 470 | 936 | 0.0 | 629 |
| Msa0254290 | AT1G78580.1 | 65.182 | 494 | 130 | 6 | 1 | 479 | 470 | 936 | 0.0 | 629 |
| Msa0254290 | AT1G78580.2 | 65.182 | 494 | 130 | 6 | 1 | 479 | 470 | 936 | 0.0 | 629 |
| Msa0254290 | AT1G78580.3 | 65.182 | 494 | 130 | 6 | 1 | 479 | 470 | 936 | 0.0 | 629 |
| Msa0254290 | AT1G16980.1 | 59.834 | 361 | 118 | 3 | 1 | 361 | 390 | 723 | 1.41e-148 | 445 |
| Msa0254290 | AT4G27550.2 | 59.673 | 367 | 117 | 5 | 1 | 363 | 381 | 720 | 2.19e-147 | 441 |
| Msa0254290 | AT4G27550.1 | 58.511 | 376 | 116 | 6 | 1 | 363 | 381 | 729 | 7.11e-145 | 434 |
| Msa0254290 | AT1G16980.2 | 53.036 | 247 | 90 | 2 | 1 | 247 | 390 | 610 | 7.57e-82 | 267 |
| Msa0254290 | AT1G06410.3 | 29.064 | 406 | 218 | 11 | 1 | 380 | 441 | 802 | 3.10e-46 | 172 |
| Msa0254290 | AT1G06410.1 | 29.064 | 406 | 218 | 11 | 1 | 380 | 441 | 802 | 3.10e-46 | 172 |
| Msa0254290 | AT1G06410.2 | 29.064 | 406 | 218 | 11 | 1 | 380 | 441 | 802 | 3.10e-46 | 172 |
| Msa0254290 | AT1G70290.2 | 29.837 | 429 | 225 | 16 | 1 | 392 | 403 | 792 | 7.02e-45 | 168 |
| Msa0254290 | AT1G70290.1 | 29.837 | 429 | 225 | 16 | 1 | 392 | 441 | 830 | 9.05e-45 | 168 |
| Msa0254290 | AT1G60140.6 | 30.334 | 389 | 202 | 14 | 1 | 358 | 443 | 793 | 1.82e-43 | 164 |
| Msa0254290 | AT1G60140.1 | 30.334 | 389 | 202 | 14 | 1 | 358 | 443 | 793 | 1.82e-43 | 164 |
| Msa0254290 | AT1G60140.2 | 30.334 | 389 | 202 | 14 | 1 | 358 | 443 | 793 | 1.82e-43 | 164 |
| Msa0254290 | AT1G60140.5 | 30.334 | 389 | 202 | 14 | 1 | 358 | 443 | 793 | 1.82e-43 | 164 |
| Msa0254290 | AT1G60140.4 | 30.334 | 389 | 202 | 14 | 1 | 358 | 443 | 793 | 1.82e-43 | 164 |
| Msa0254290 | AT1G23870.1 | 28.866 | 388 | 209 | 10 | 1 | 358 | 443 | 793 | 2.43e-42 | 161 |
| Msa0254290 | AT4G17770.1 | 28.351 | 388 | 211 | 10 | 1 | 358 | 443 | 793 | 8.42e-42 | 159 |
| Msa0254290 | AT4G17770.2 | 28.351 | 388 | 211 | 10 | 1 | 358 | 443 | 793 | 8.42e-42 | 159 |
| Msa0254290 | AT2G18700.1 | 27.735 | 393 | 208 | 14 | 1 | 358 | 435 | 786 | 9.66e-41 | 156 |
| Msa0254290 | AT1G60140.3 | 30.321 | 343 | 175 | 11 | 1 | 312 | 443 | 752 | 8.35e-37 | 144 |
| Msa0254290 | AT1G68020.2 | 27.551 | 392 | 210 | 14 | 1 | 358 | 453 | 804 | 1.98e-35 | 140 |
| Msa0254290 | AT1G68020.3 | 27.551 | 392 | 210 | 14 | 1 | 358 | 453 | 804 | 1.98e-35 | 140 |
| Msa0254290 | AT1G68020.1 | 25.701 | 214 | 115 | 6 | 1 | 181 | 453 | 655 | 5.35e-16 | 81.3 |
Find 118 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTAATCGATTGCTTATTT+TGG | 0.140569 | 2_2:-47131648 | Msa0254290:intron |
| TCAACTGATGCATTTGAAAT+TGG | 0.148194 | 2_2:+47129462 | None:intergenic |
| TCTTGGGGCTGGGGCACTTC+TGG | 0.167740 | 2_2:-47132355 | Msa0254290:CDS |
| TTAAGTAATTATGAAATTAT+TGG | 0.174104 | 2_2:+47128448 | None:intergenic |
| AGAACGACAACTGTAGTATT+TGG | 0.200435 | 2_2:+47130023 | None:intergenic |
| GAGCCAGAGCCTTCTTCTTT+TGG | 0.204253 | 2_2:-47128971 | Msa0254290:CDS |
| CATTCCATGTTTAGTTGTTC+TGG | 0.247193 | 2_2:+47129816 | None:intergenic |
| CTGCGCAGTCTCTTGGGGCT+GGG | 0.247244 | 2_2:-47132365 | Msa0254290:CDS |
| GCTGCGCAGTCTCTTGGGGC+TGG | 0.263940 | 2_2:-47132366 | Msa0254290:CDS |
| GCTGGTGCTGCGCAGTCTCT+TGG | 0.273891 | 2_2:-47132372 | Msa0254290:CDS |
| GGCCGCATCAATGGCAGATT+TGG | 0.285107 | 2_2:-47134302 | Msa0254290:five_prime_UTR |
| TTGGTGTTCTTGTAGTTTGC+TGG | 0.308000 | 2_2:-47132390 | Msa0254290:intron |
| TTAATTGATGGGATCTTCAT+AGG | 0.310450 | 2_2:+47128887 | None:intergenic |
| TGTGTTTACGTTGCGAGTCT+TGG | 0.317126 | 2_2:-47134472 | Msa0254290:five_prime_UTR |
| GTCAACGGTTGTTTCAATTC+TGG | 0.317553 | 2_2:+47130062 | None:intergenic |
| ATTGATTATGTTCTATGTAT+AGG | 0.327982 | 2_2:-47129224 | Msa0254290:CDS |
| CTGGTGCTGCGCAGTCTCTT+GGG | 0.339391 | 2_2:-47132371 | Msa0254290:CDS |
| ACTACAGTTGTCGTTCTTAG+TGG | 0.343066 | 2_2:-47130017 | Msa0254290:CDS |
| ACAATCATAGATGTTGAGTT+TGG | 0.344179 | 2_2:-47129528 | Msa0254290:intron |
| TGATGGCATGTTCAGAGCTT+TGG | 0.345059 | 2_2:+47132293 | None:intergenic |
| ATATTGTTGAATTGTCTTCC+TGG | 0.352151 | 2_2:+47131679 | None:intergenic |
| TGTGCTCTGTACGCTGTTAC+AGG | 0.373206 | 2_2:-47133631 | Msa0254290:intron |
| CAGAGCTTTGGCAATTGCTT+CGG | 0.380321 | 2_2:+47132305 | None:intergenic |
| CATAGGTGATACCTTCTCAT+TGG | 0.388274 | 2_2:+47128904 | None:intergenic |
| AGCAGCCATTGATCGCATCC+TGG | 0.394829 | 2_2:-47129282 | Msa0254290:CDS |
| CTTAGCAATGCTGCTTCCTC+AGG | 0.398595 | 2_2:-47128546 | Msa0254290:three_prime_UTR |
| GGCCAACAATTTCATGAACT+TGG | 0.402946 | 2_2:+47134321 | None:intergenic |
| TGCGCAGTCTCTTGGGGCTG+GGG | 0.406149 | 2_2:-47132364 | Msa0254290:CDS |
| TTTCTTGTAATATAGTCATT+TGG | 0.407325 | 2_2:-47128484 | Msa0254290:three_prime_UTR |
| TTGCACTTGTCACGTCTTTG+AGG | 0.411982 | 2_2:-47132614 | Msa0254290:five_prime_UTR |
| CATACACTGTAGGGATTCAA+TGG | 0.415351 | 2_2:-47130149 | Msa0254290:intron |
| AAAGGGAAGCTTCCCTTGTA+TGG | 0.415736 | 2_2:-47129639 | Msa0254290:CDS |
| CTTTGCCAGAAAAGATCTCT+TGG | 0.423899 | 2_2:-47128757 | Msa0254290:CDS |
| CGCTTCTCTCTCTCTTCTGA+TGG | 0.424641 | 2_2:+47132276 | None:intergenic |
| GTCATCCATTCTCCATTTGA+AGG | 0.427665 | 2_2:+47129846 | None:intergenic |
| TAAACCCTTCAAATGGAGAA+TGG | 0.428451 | 2_2:-47129851 | Msa0254290:CDS |
| GAACGACAACTGTAGTATTT+GGG | 0.433522 | 2_2:+47130024 | None:intergenic |
| GGGCACTTCTGGTCAACCCC+TGG | 0.433984 | 2_2:-47132344 | Msa0254290:CDS |
| GTGTTTACGTTGCGAGTCTT+GGG | 0.439334 | 2_2:-47134471 | Msa0254290:five_prime_UTR |
| TTCTTCTCTGAATTTGAGAT+AGG | 0.439595 | 2_2:+47128824 | None:intergenic |
| AGCCAAGTTCATGAAATTGT+TGG | 0.441283 | 2_2:-47134323 | Msa0254290:five_prime_UTR |
| TCAGTTGAGGTGCGAGCTGC+TGG | 0.441581 | 2_2:-47129420 | Msa0254290:CDS |
| AGGTGATCAACTGAAAGAAA+TGG | 0.447767 | 2_2:-47130099 | Msa0254290:CDS |
| GAAATTGTTGGCCGCATCAA+TGG | 0.456665 | 2_2:-47134311 | Msa0254290:five_prime_UTR |
| ACTTGGCTAGCAGCAGAGAA+TGG | 0.461952 | 2_2:-47129882 | Msa0254290:CDS |
| TTCCATCTTTGCGAACTACT+AGG | 0.463260 | 2_2:-47129950 | Msa0254290:CDS |
| ATAGGTGATACCTTCTCATT+GGG | 0.464385 | 2_2:+47128905 | None:intergenic |
| AACCCACACTGCACAGGAAT+GGG | 0.466931 | 2_2:-47132226 | Msa0254290:CDS |
| AACCTAGTAGTTCGCAAAGA+TGG | 0.468014 | 2_2:+47129948 | None:intergenic |
| GCAGCCATTGATCGCATCCT+GGG | 0.469093 | 2_2:-47129281 | Msa0254290:CDS |
| CATGTCTGTAATTCCATACA+AGG | 0.479314 | 2_2:+47129626 | None:intergenic |
| GCATCAGTTGAAGTTGTTCA+AGG | 0.480286 | 2_2:-47129450 | Msa0254290:CDS |
| CTTGGCTAGCAGCAGAGAAT+GGG | 0.481359 | 2_2:-47129881 | Msa0254290:CDS |
| ACTGAGCAAGTTGAGAGAAA+AGG | 0.482087 | 2_2:-47130119 | Msa0254290:CDS |
| ATACATAGAACATAATCAAT+TGG | 0.483843 | 2_2:+47129227 | None:intergenic |
| TGCCCATTCCTGTGCAGTGT+GGG | 0.484816 | 2_2:+47132224 | None:intergenic |
| GAACGCACCAGGTGATGTAT+AGG | 0.490137 | 2_2:+47134263 | None:intergenic |
| CAGAACAACTAAACATGGAA+TGG | 0.490631 | 2_2:-47129815 | Msa0254290:CDS |
| AATTACTTCTCGTGTGCTGT+TGG | 0.497919 | 2_2:-47128710 | Msa0254290:CDS |
| GTTGTCGTTCTTAGTGGAAG+TGG | 0.498029 | 2_2:-47130011 | Msa0254290:CDS |
| TGCACTTGTCACGTCTTTGA+GGG | 0.501613 | 2_2:-47132613 | Msa0254290:five_prime_UTR |
| CTGTTGTTGAGGCACAGTTA+AGG | 0.503797 | 2_2:-47131730 | Msa0254290:CDS |
| TTCCACCACGGCTCGATACC+AGG | 0.511139 | 2_2:-47131697 | Msa0254290:CDS |
| AATTCTCCTTCTTGAGGTCA+AGG | 0.515724 | 2_2:+47128729 | None:intergenic |
| CAACCCACACTGCACAGGAA+TGG | 0.516601 | 2_2:-47132227 | Msa0254290:CDS |
| AAGAGAGAGAGAAGCGACAT+AGG | 0.520818 | 2_2:-47132269 | Msa0254290:CDS |
| TCATCCATTCTCCATTTGAA+GGG | 0.531408 | 2_2:+47129847 | None:intergenic |
| GTTTGGAAAACTTCAAGCAA+GGG | 0.536146 | 2_2:-47129511 | Msa0254290:CDS |
| AGAACAACTAAACATGGAAT+GGG | 0.537694 | 2_2:-47129814 | Msa0254290:CDS |
| GCACCAAAAGAAGAAGGCTC+TGG | 0.541773 | 2_2:+47128968 | None:intergenic |
| CTTGTCACGTCTTTGAGGGA+TGG | 0.545621 | 2_2:-47132609 | Msa0254290:five_prime_UTR |
| TTGGACCTGTGCAGAGATGT+TGG | 0.547598 | 2_2:+47129481 | None:intergenic |
| TGGTGCTGCGCAGTCTCTTG+GGG | 0.550088 | 2_2:-47132370 | Msa0254290:CDS |
| TGCTGTTCCTATACATCACC+TGG | 0.551899 | 2_2:-47134270 | Msa0254290:intron |
| ACGGTTGTTTCAATTCTGGA+TGG | 0.553293 | 2_2:+47130066 | None:intergenic |
| AGACTTGCACCAAAAGAAGA+AGG | 0.558609 | 2_2:+47128962 | None:intergenic |
| TAAGCTATTAGCAAGGGGTA+AGG | 0.560667 | 2_2:-47134391 | Msa0254290:five_prime_UTR |
| CTGCCCATTCCTGTGCAGTG+TGG | 0.561509 | 2_2:+47132223 | None:intergenic |
| CATCAGTTGAAGTTGTTCAA+GGG | 0.563088 | 2_2:-47129449 | Msa0254290:CDS |
| AGAAGTAATTCTCCTTCTTG+AGG | 0.568366 | 2_2:+47128723 | None:intergenic |
| AGTTTGGAAAACTTCAAGCA+AGG | 0.574644 | 2_2:-47129512 | Msa0254290:CDS |
| TGTAACAACCCACACTGCAC+AGG | 0.574820 | 2_2:-47132232 | Msa0254290:CDS |
| ATGCTCCAACATCTCTGCAC+AGG | 0.577000 | 2_2:-47129486 | Msa0254290:CDS |
| AAAAGCTTAAGCTATTAGCA+AGG | 0.577755 | 2_2:-47134398 | Msa0254290:five_prime_UTR |
| TCAAGGGAGCCGATCAGTTG+AGG | 0.579571 | 2_2:-47129433 | Msa0254290:CDS |
| ATTATTTATCTTTCAACCTG+AGG | 0.579721 | 2_2:+47128530 | None:intergenic |
| GTTTAGTTGTTCTGGCATTG+TGG | 0.582768 | 2_2:+47129824 | None:intergenic |
| AAAGCTTAAGCTATTAGCAA+GGG | 0.584578 | 2_2:-47134397 | Msa0254290:five_prime_UTR |
| CAAGTCAGCAAATCAAAGCA+AGG | 0.587265 | 2_2:-47128855 | Msa0254290:CDS |
| CAGCCATTGATCGCATCCTG+GGG | 0.589649 | 2_2:-47129280 | Msa0254290:CDS |
| GTATGGAATTACAGACATGC+AGG | 0.597305 | 2_2:-47129622 | Msa0254290:intron |
| GTCTTCCTGGTATCGAGCCG+TGG | 0.603768 | 2_2:+47131692 | None:intergenic |
| GCTAAATGATACTGTTGTTG+AGG | 0.603856 | 2_2:-47131741 | Msa0254290:CDS |
| CAGTGTGGGTTGTTACATGA+TGG | 0.608448 | 2_2:+47132238 | None:intergenic |
| TTCCAAATCTGCCATTGATG+CGG | 0.609653 | 2_2:+47134300 | None:intergenic |
| AGCTAAGTTTCCCAATGAGA+AGG | 0.609671 | 2_2:-47128915 | Msa0254290:CDS |
| GAATGTCCTTGACCTCAAGA+AGG | 0.612235 | 2_2:-47128735 | Msa0254290:CDS |
| CAGCTCGCACCTCAACTGAT+CGG | 0.613026 | 2_2:+47129424 | None:intergenic |
| TACACTTCCATCGTCTGACG+AGG | 0.614493 | 2_2:-47128663 | Msa0254290:CDS |
| AATGCCAGAACAACTAAACA+TGG | 0.615721 | 2_2:-47129820 | Msa0254290:CDS |
| AAGTCAGCAAATCAAAGCAA+GGG | 0.617111 | 2_2:-47128854 | Msa0254290:CDS |
| TTCCTGGTATCGAGCCGTGG+TGG | 0.620755 | 2_2:+47131695 | None:intergenic |
| TTGATCTGTTAATATGACAG+TGG | 0.621044 | 2_2:+47134355 | None:intergenic |
| TCAGCAACCTCGTCAGACGA+TGG | 0.623696 | 2_2:+47128656 | None:intergenic |
| ATAATGTCAACCGCACGGCA+CGG | 0.631844 | 2_2:-47128793 | Msa0254290:CDS |
| AGCAAATAATGTCAACCGCA+CGG | 0.632433 | 2_2:-47128798 | Msa0254290:CDS |
| ACTTCAAAGAATATAACACT+TGG | 0.638884 | 2_2:-47129899 | Msa0254290:CDS |
| AAGCTTAAGCTATTAGCAAG+GGG | 0.648897 | 2_2:-47134396 | Msa0254290:five_prime_UTR |
| TCATTGCAAAGTTGTGTCAA+CGG | 0.653847 | 2_2:+47130047 | None:intergenic |
| CTTTCTTCAAAATACGACCG+AGG | 0.656622 | 2_2:+47129658 | None:intergenic |
| GGAATGGGTTGACAGTGTAA+AGG | 0.661125 | 2_2:-47129799 | Msa0254290:intron |
| ACTTCACTGAAAGAACTCCT+CGG | 0.672914 | 2_2:-47129675 | Msa0254290:CDS |
| GCGAGCTGCTGGTGTTACAA+AGG | 0.677504 | 2_2:-47129409 | Msa0254290:intron |
| ATGTCTGTAATTCCATACAA+GGG | 0.694405 | 2_2:+47129627 | None:intergenic |
| AGCCATTGATCGCATCCTGG+GGG | 0.711218 | 2_2:-47129279 | Msa0254290:CDS |
| ATTTACACTTCCGTGCCGTG+CGG | 0.713841 | 2_2:+47128783 | None:intergenic |
| GTGCGTAAAAGTCAAGAGTG+CGG | 0.721867 | 2_2:+47133656 | None:intergenic |
| GGACAAAACAAGTTCCACCA+CGG | 0.732660 | 2_2:-47131709 | Msa0254290:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTAACAAAAAACTAAAA+AGG | + | chr2_2:47128449-47128468 | None:intergenic | 10.0% |
| !!! | ATTTTATATTTTAAATCATG+CGG | + | chr2_2:47129679-47129698 | None:intergenic | 10.0% |
| !! | AATTAATTTCAAAATTTGAA+TGG | + | chr2_2:47132638-47132657 | None:intergenic | 10.0% |
| !! | ATGTAATTAAAAATATCAAA+GGG | + | chr2_2:47133150-47133169 | None:intergenic | 10.0% |
| !! | AATGTAATTAAAAATATCAA+AGG | + | chr2_2:47133151-47133170 | None:intergenic | 10.0% |
| !!! | TTTGATATTTTTAATTACAT+TGG | - | chr2_2:47133150-47133169 | Msa0254290:intron | 10.0% |
| !! | TTAAGTAATTATGAAATTAT+TGG | + | chr2_2:47134433-47134452 | None:intergenic | 10.0% |
| !!! | AGAAATTGGATTTTTATTTT+GGG | - | chr2_2:47128882-47128901 | Msa0254290:CDS | 15.0% |
| !! | AGACTATTATTCATTAATAT+TGG | - | chr2_2:47129187-47129206 | Msa0254290:intron | 15.0% |
| !! | AAATAACATTTATAATGAAG+AGG | + | chr2_2:47129506-47129525 | None:intergenic | 15.0% |
| !! | TTCTATATTTCAGTTATATT+AGG | - | chr2_2:47130402-47130421 | Msa0254290:intron | 15.0% |
| !! | TTACATAATGATTCATAATT+TGG | - | chr2_2:47130782-47130801 | Msa0254290:intron | 15.0% |
| !! | CATATAAAAATCATGATCTA+AGG | - | chr2_2:47128637-47128656 | Msa0254290:CDS | 20.0% |
| !!! | GAGAAATTGGATTTTTATTT+TGG | - | chr2_2:47128881-47128900 | Msa0254290:CDS | 20.0% |
| !!! | TTAACTTGTTTTTTATACGA+AGG | - | chr2_2:47128933-47128952 | Msa0254290:CDS | 20.0% |
| !!! | TAACTTGTTTTTTATACGAA+GGG | - | chr2_2:47128934-47128953 | Msa0254290:CDS | 20.0% |
| !!! | AAACAAGTATTTTCCTTTTT+TGG | + | chr2_2:47129431-47129450 | None:intergenic | 20.0% |
| !!! | AAAAAGGAAAATACTTGTTT+TGG | - | chr2_2:47129431-47129450 | Msa0254290:CDS | 20.0% |
| !! | CAAAATAAAGAGCAAATATT+AGG | + | chr2_2:47129749-47129768 | None:intergenic | 20.0% |
| !!! | ATTTTGATAATTCTCTTACT+TGG | + | chr2_2:47129849-47129868 | None:intergenic | 20.0% |
| !! | TAAATTTAAAAGATTACGAG+TGG | + | chr2_2:47129967-47129986 | None:intergenic | 20.0% |
| !!! | TCGAGCTTTAAAATATATAT+TGG | - | chr2_2:47130038-47130057 | Msa0254290:CDS | 20.0% |
| !!! | CGAGCTTTAAAATATATATT+GGG | - | chr2_2:47130039-47130058 | Msa0254290:CDS | 20.0% |
| !! | CAGGGAAATATAAATAAAAT+AGG | + | chr2_2:47130124-47130143 | None:intergenic | 20.0% |
| !!! | TTTTGTTGTTGTAAAATTTC+CGG | - | chr2_2:47130195-47130214 | Msa0254290:intron | 20.0% |
| !!! | AGTTAAAAGATTACTTTTTC+GGG | + | chr2_2:47131457-47131476 | None:intergenic | 20.0% |
| !!! | CAGTTAAAAGATTACTTTTT+CGG | + | chr2_2:47131458-47131477 | None:intergenic | 20.0% |
| !!! | GAAAAAGTAATCTTTTAACT+GGG | - | chr2_2:47131457-47131476 | Msa0254290:intron | 20.0% |
| !!! | AAATTTTTAATAACGTATCG+AGG | + | chr2_2:47131953-47131972 | None:intergenic | 20.0% |
| !! | TAATTTCAAAATTTGAATGG+TGG | + | chr2_2:47132635-47132654 | None:intergenic | 20.0% |
| !! | TAAAAATATCAAAGGGAAAA+GGG | + | chr2_2:47133143-47133162 | None:intergenic | 20.0% |
| !! | TTAAAAATATCAAAGGGAAA+AGG | + | chr2_2:47133144-47133163 | None:intergenic | 20.0% |
| !!! | GACAATTTTTCATTTAATCA+GGG | - | chr2_2:47133573-47133592 | Msa0254290:intron | 20.0% |
| !! | ATACATAGAACATAATCAAT+TGG | + | chr2_2:47133654-47133673 | None:intergenic | 20.0% |
| !! | ATTGATTATGTTCTATGTAT+AGG | - | chr2_2:47133654-47133673 | Msa0254290:five_prime_UTR | 20.0% |
| !! | TAATCAATCTTGAATGATAT+GGG | + | chr2_2:47133814-47133833 | None:intergenic | 20.0% |
| !!! | TGAATCCATTTTTAATTGAT+GGG | + | chr2_2:47134005-47134024 | None:intergenic | 20.0% |
| !!! | TTGAATCCATTTTTAATTGA+TGG | + | chr2_2:47134006-47134025 | None:intergenic | 20.0% |
| !! | TTTCTTGTAATATAGTCATT+TGG | - | chr2_2:47134394-47134413 | Msa0254290:five_prime_UTR | 20.0% |
| ! | TAAATTAGTACTGTATACGA+TGG | + | chr2_2:47128689-47128708 | None:intergenic | 25.0% |
| ! | ATTTATACCAACACTTTCTT+TGG | - | chr2_2:47128799-47128818 | Msa0254290:CDS | 25.0% |
| ! | ATTTATACCAACACTTTCTT+TGG | - | chr2_2:47128799-47128818 | Msa0254290:CDS | 25.0% |
| ! | TTATAATGAAGAGGCTAAAA+GGG | + | chr2_2:47129497-47129516 | None:intergenic | 25.0% |
| ! | TTTATAATGAAGAGGCTAAA+AGG | + | chr2_2:47129498-47129517 | None:intergenic | 25.0% |
| ! | AACTTTGCAAAGAATCTATT+GGG | + | chr2_2:47129708-47129727 | None:intergenic | 25.0% |
| ! | AAACTTTGCAAAGAATCTAT+TGG | + | chr2_2:47129709-47129728 | None:intergenic | 25.0% |
| ! | GTTACTCTTTCAGTAATTTA+TGG | - | chr2_2:47129781-47129800 | Msa0254290:intron | 25.0% |
| !! | CAACCAAAAATATGTTTTCA+CGG | - | chr2_2:47129941-47129960 | Msa0254290:CDS | 25.0% |
| !! | AATTTTACTACAGATCTTCT+GGG | + | chr2_2:47129994-47130013 | None:intergenic | 25.0% |
| !! | AAATTTTACTACAGATCTTC+TGG | + | chr2_2:47129995-47130014 | None:intergenic | 25.0% |
| ! | AATAGGATTTAATAGACTTG+AGG | + | chr2_2:47130107-47130126 | None:intergenic | 25.0% |
| ! | TCTTATATATTCGAAGTTTG+TGG | - | chr2_2:47130719-47130738 | Msa0254290:intron | 25.0% |
| ! | AACAGAATAAGATACAATCA+AGG | + | chr2_2:47130903-47130922 | None:intergenic | 25.0% |
| !!! | TGTATCTTATTCTGTTGTTT+TGG | - | chr2_2:47130907-47130926 | Msa0254290:intron | 25.0% |
| !!! | GTATCTTATTCTGTTGTTTT+GGG | - | chr2_2:47130908-47130927 | Msa0254290:intron | 25.0% |
| ! | TAGGTTTAGGAATAAAAGAA+AGG | - | chr2_2:47130997-47131016 | Msa0254290:intron | 25.0% |
| !! | AACTAATCGATTGCTTATTT+TGG | - | chr2_2:47131230-47131249 | Msa0254290:intron | 25.0% |
| ! | TTGACGATAAGTATTCAAAT+AGG | + | chr2_2:47131283-47131302 | None:intergenic | 25.0% |
| ! | TATTTGAATACTTATCGTCA+AGG | - | chr2_2:47131282-47131301 | Msa0254290:intron | 25.0% |
| ! | CAAACAAAGACTAAAATACT+AGG | + | chr2_2:47131331-47131350 | None:intergenic | 25.0% |
| !! | CGAAAAAGTAATCTTTTAAC+TGG | - | chr2_2:47131456-47131475 | Msa0254290:intron | 25.0% |
| !! | CATTTTGCTAAGTATTAACA+TGG | + | chr2_2:47131548-47131567 | None:intergenic | 25.0% |
| ! | TGTTAATACTTAGCAAAATG+TGG | - | chr2_2:47131548-47131567 | Msa0254290:intron | 25.0% |
| !!! | GATTGTAATTTTAAGTGTGA+AGG | - | chr2_2:47131749-47131768 | Msa0254290:intron | 25.0% |
| ! | TATTAGACTTCATCAGATTA+AGG | - | chr2_2:47131775-47131794 | Msa0254290:intron | 25.0% |
| !! | AAAATAATGGAAAACAGCAT+TGG | + | chr2_2:47131810-47131829 | None:intergenic | 25.0% |
| ! | AAGAAATAAAACTACAAGTC+TGG | + | chr2_2:47132322-47132341 | None:intergenic | 25.0% |
| !! | AATATGTAAGACAGAAGTAT+AGG | - | chr2_2:47132351-47132370 | Msa0254290:CDS | 25.0% |
| ! | GATTAATTACAAGTGAAACA+TGG | + | chr2_2:47132679-47132698 | None:intergenic | 25.0% |
| ! | ACTTCAAAGAATATAACACT+TGG | - | chr2_2:47132979-47132998 | Msa0254290:intron | 25.0% |
| !!! | ATGTTTTTAAACCCTTCAAA+TGG | - | chr2_2:47133020-47133039 | Msa0254290:intron | 25.0% |
| ! | CAAAAATATGCTGAAAATAC+AGG | + | chr2_2:47133180-47133199 | None:intergenic | 25.0% |
| ! | GTAATGTCAGTAATTAGAAA+AGG | + | chr2_2:47133502-47133521 | None:intergenic | 25.0% |
| !! | CGACAATTTTTCATTTAATC+AGG | - | chr2_2:47133572-47133591 | Msa0254290:intron | 25.0% |
| ! | CTAATCAATCTTGAATGATA+TGG | + | chr2_2:47133815-47133834 | None:intergenic | 25.0% |
| ! | AAGATCCCATCAATTAAAAA+TGG | - | chr2_2:47133997-47134016 | Msa0254290:intron | 25.0% |
| ! | ATTATTTATCTTTCAACCTG+AGG | + | chr2_2:47134351-47134370 | None:intergenic | 25.0% |
| !!! | ACTACTTTTTTTTCCTTACA+AGG | + | chr2_2:47134482-47134501 | None:intergenic | 25.0% |
| !! | GAAAAAAAAGTAGTTTTCGA+TGG | - | chr2_2:47134488-47134507 | Msa0254290:five_prime_UTR | 25.0% |
| ! | TGCTAATAGCTTAAGCTTTT+CGG | + | chr2_2:47128480-47128499 | None:intergenic | 30.0% |
| AAAAGCTTAAGCTATTAGCA+AGG | - | chr2_2:47128480-47128499 | Msa0254290:three_prime_UTR | 30.0% | |
| AAAGCTTAAGCTATTAGCAA+GGG | - | chr2_2:47128481-47128500 | Msa0254290:three_prime_UTR | 30.0% | |
| TTGATCTGTTAATATGACAG+TGG | + | chr2_2:47128526-47128545 | None:intergenic | 30.0% | |
| TTAAATCTCATCAAGTGATC+TGG | - | chr2_2:47128726-47128745 | Msa0254290:CDS | 30.0% | |
| !! | TTCTTTGGAATAGGAGAAAT+TGG | - | chr2_2:47128814-47128833 | Msa0254290:CDS | 30.0% |
| !! | TTCTTTGGAATAGGAGAAAT+TGG | - | chr2_2:47128814-47128833 | Msa0254290:CDS | 30.0% |
| AACAAAAGTTCATCGAAAAC+TGG | - | chr2_2:47128990-47129009 | Msa0254290:CDS | 30.0% | |
| CATTAATATTGGATATCTGC+AGG | - | chr2_2:47129198-47129217 | Msa0254290:intron | 30.0% | |
| ! | TTTTTGCACATACAGACTAT+TGG | + | chr2_2:47129349-47129368 | None:intergenic | 30.0% |
| ! | ATTTTAAATCATGCGGATCA+AGG | + | chr2_2:47129672-47129691 | None:intergenic | 30.0% |
| ! | TTTTATCACAGTACATGAAC+AGG | + | chr2_2:47129817-47129836 | None:intergenic | 30.0% |
| TTCATGTACTGTGATAAAAG+TGG | - | chr2_2:47129818-47129837 | Msa0254290:CDS | 30.0% | |
| TATATATTGGGCATAGATGA+AGG | - | chr2_2:47130051-47130070 | Msa0254290:CDS | 30.0% | |
| ATATGCTATAAGCAGAAAAC+CGG | + | chr2_2:47130217-47130236 | None:intergenic | 30.0% | |
| TGGATTTGACATCTGATATT+TGG | - | chr2_2:47130469-47130488 | Msa0254290:intron | 30.0% | |
| AAGTTTGTGGTTTACAATGA+GGG | - | chr2_2:47130732-47130751 | Msa0254290:intron | 30.0% | |
| !! | AAGACTTTGAAATGTAACTC+TGG | - | chr2_2:47130814-47130833 | Msa0254290:intron | 30.0% |
| GGAGACGACTTTAATTAATT+AGG | + | chr2_2:47130882-47130901 | None:intergenic | 30.0% | |
| TTATTTACTTGTAACGCTGT+AGG | - | chr2_2:47130978-47130997 | Msa0254290:intron | 30.0% | |
| GAAGTATGATATGAAGGAAT+AGG | - | chr2_2:47131050-47131069 | Msa0254290:intron | 30.0% | |
| TTTGAAGATAAGGATCATCA+TGG | + | chr2_2:47131105-47131124 | None:intergenic | 30.0% | |
| GCTGCAAATATTTGAAGATA+AGG | + | chr2_2:47131115-47131134 | None:intergenic | 30.0% | |
| ATATTGTTGAATTGTCTTCC+TGG | + | chr2_2:47131202-47131221 | None:intergenic | 30.0% | |
| !! | TCACTATTTCTAAAGTAGCT+GGG | + | chr2_2:47131365-47131384 | None:intergenic | 30.0% |
| !! | TTCACTATTTCTAAAGTAGC+TGG | + | chr2_2:47131366-47131385 | None:intergenic | 30.0% |
| TTATGGTAAATTTCCCCATT+GGG | + | chr2_2:47131487-47131506 | None:intergenic | 30.0% | |
| !! | TTCTGCTGTTTGTAAGATTT+TGG | + | chr2_2:47131522-47131541 | None:intergenic | 30.0% |
| GATTCCTTGATTAATCTCTT+AGG | + | chr2_2:47131657-47131676 | None:intergenic | 30.0% | |
| !! | TTTCCATTATTTTGCAAACC+CGG | - | chr2_2:47131817-47131836 | Msa0254290:intron | 30.0% |
| AGTACTTATGATGTTCTCTT+TGG | + | chr2_2:47132118-47132137 | None:intergenic | 30.0% | |
| TAGAATTCAATCAGTGGTAA+TGG | - | chr2_2:47132215-47132234 | Msa0254290:CDS | 30.0% | |
| AAAAAATGACCTATACGTGT+CGG | + | chr2_2:47132422-47132441 | None:intergenic | 30.0% | |
| ! | ATACGATACTTCACCATTTT+TGG | - | chr2_2:47132587-47132606 | Msa0254290:CDS | 30.0% |
| ! | ATTGATGATACATACACTGT+AGG | - | chr2_2:47132719-47132738 | Msa0254290:intron | 30.0% |
| ! | TTGATGATACATACACTGTA+GGG | - | chr2_2:47132720-47132739 | Msa0254290:intron | 30.0% |
| AGAACAACTAAACATGGAAT+GGG | - | chr2_2:47133064-47133083 | Msa0254290:intron | 30.0% | |
| ATGTCTGTAATTCCATACAA+GGG | + | chr2_2:47133254-47133273 | None:intergenic | 30.0% | |
| ! | TCAACTGATGCATTTGAAAT+TGG | + | chr2_2:47133419-47133438 | None:intergenic | 30.0% |
| ! | TCTATGTATAGGACATTTTC+TGG | - | chr2_2:47133665-47133684 | Msa0254290:intron | 30.0% |
| TTAATTGATGGGATCTTCAT+AGG | + | chr2_2:47133994-47134013 | None:intergenic | 30.0% | |
| ! | TTCTTCTCTGAATTTGAGAT+AGG | + | chr2_2:47134057-47134076 | None:intergenic | 30.0% |
| AAGCTTAAGCTATTAGCAAG+GGG | - | chr2_2:47128482-47128501 | Msa0254290:three_prime_UTR | 35.0% | |
| AGCCAAGTTCATGAAATTGT+TGG | - | chr2_2:47128555-47128574 | Msa0254290:three_prime_UTR | 35.0% | |
| ! | GATTTTTATATGAACGCACC+AGG | + | chr2_2:47128629-47128648 | None:intergenic | 35.0% |
| !! | ACCAACACTTTCTTTGGAAT+AGG | - | chr2_2:47128805-47128824 | Msa0254290:CDS | 35.0% |
| ! | TCCTATTCCAAAGAAAGTGT+TGG | + | chr2_2:47128809-47128828 | None:intergenic | 35.0% |
| !! | ACCAACACTTTCTTTGGAAT+AGG | - | chr2_2:47128805-47128824 | Msa0254290:CDS | 35.0% |
| ! | TCCTATTCCAAAGAAAGTGT+TGG | + | chr2_2:47128809-47128828 | None:intergenic | 35.0% |
| TGACATCAGAAGTTATTCAC+AGG | + | chr2_2:47129314-47129333 | None:intergenic | 35.0% | |
| ATAGCCTGTGTGAATAACTT+TGG | - | chr2_2:47129368-47129387 | Msa0254290:intron | 35.0% | |
| ACATCCAAAGTTATTCACAC+AGG | + | chr2_2:47129375-47129394 | None:intergenic | 35.0% | |
| GCACTTACATTCACCAAAAA+AGG | - | chr2_2:47129415-47129434 | Msa0254290:CDS | 35.0% | |
| TCTTGTGGAATAAGTATCAC+AGG | - | chr2_2:47129457-47129476 | Msa0254290:CDS | 35.0% | |
| ! | TGGCCGTGAAAACATATTTT+TGG | + | chr2_2:47129947-47129966 | None:intergenic | 35.0% |
| GAGAGACAATTGAGAATTCA+GGG | + | chr2_2:47130142-47130161 | None:intergenic | 35.0% | |
| TGAGAGACAATTGAGAATTC+AGG | + | chr2_2:47130143-47130162 | None:intergenic | 35.0% | |
| AGCCTGTCAAGAAAAAAAGA+AGG | - | chr2_2:47130319-47130338 | Msa0254290:intron | 35.0% | |
| GCCTGTCAAGAAAAAAAGAA+GGG | - | chr2_2:47130320-47130339 | Msa0254290:intron | 35.0% | |
| CCTGTCAAGAAAAAAAGAAG+GGG | - | chr2_2:47130321-47130340 | Msa0254290:intron | 35.0% | |
| CTGTCAAGAAAAAAAGAAGG+GGG | - | chr2_2:47130322-47130341 | Msa0254290:intron | 35.0% | |
| TTCAGTTATATTAGGCTGAG+TGG | - | chr2_2:47130410-47130429 | Msa0254290:intron | 35.0% | |
| GAAGTTTGTGGTTTACAATG+AGG | - | chr2_2:47130731-47130750 | Msa0254290:intron | 35.0% | |
| !! | ACTTTGAAATGTAACTCTGG+AGG | - | chr2_2:47130817-47130836 | Msa0254290:intron | 35.0% |
| !!! | AGGCTCTTTTAAAATGTCAC+TGG | - | chr2_2:47130837-47130856 | Msa0254290:intron | 35.0% |
| TGCACTGAAGTATGATATGA+AGG | - | chr2_2:47131044-47131063 | Msa0254290:intron | 35.0% | |
| GCTAAATGATACTGTTGTTG+AGG | - | chr2_2:47131137-47131156 | Msa0254290:intron | 35.0% | |
| AGGCGAAGAAAGATAGTTAA+AGG | + | chr2_2:47131311-47131330 | None:intergenic | 35.0% | |
| !! | ATTTCTAAAGTAGCTGGGTA+GGG | + | chr2_2:47131360-47131379 | None:intergenic | 35.0% |
| !! | TATTTCTAAAGTAGCTGGGT+AGG | + | chr2_2:47131361-47131380 | None:intergenic | 35.0% |
| !! | TTTTAACTGGGAATACCCAA+TGG | - | chr2_2:47131469-47131488 | Msa0254290:intron | 35.0% |
| TTTAACTGGGAATACCCAAT+GGG | - | chr2_2:47131470-47131489 | Msa0254290:intron | 35.0% | |
| GTTATGGTAAATTTCCCCAT+TGG | + | chr2_2:47131488-47131507 | None:intergenic | 35.0% | |
| ! | TTTGGAGTCATGTCAAGTTA+TGG | + | chr2_2:47131504-47131523 | None:intergenic | 35.0% |
| ACTTGTTCGTCTTCAATAAG+CGG | + | chr2_2:47131584-47131603 | None:intergenic | 35.0% | |
| GCATCCTAAGAGATTAATCA+AGG | - | chr2_2:47131650-47131669 | Msa0254290:CDS | 35.0% | |
| ! | TACGAATGATTTGATGACCA+TGG | - | chr2_2:47131704-47131723 | Msa0254290:CDS | 35.0% |
| ! | ACGAATGATTTGATGACCAT+GGG | - | chr2_2:47131705-47131724 | Msa0254290:CDS | 35.0% |
| !! | TTCCATTATTTTGCAAACCC+GGG | - | chr2_2:47131818-47131837 | Msa0254290:intron | 35.0% |
| TCAAAATTCCCGATACGATA+CGG | - | chr2_2:47131927-47131946 | Msa0254290:intron | 35.0% | |
| CTTATGATGTTCTCTTTGGA+TGG | + | chr2_2:47132114-47132133 | None:intergenic | 35.0% | |
| ACAGAGTAGAATTCAATCAG+TGG | - | chr2_2:47132209-47132228 | Msa0254290:intron | 35.0% | |
| ! | AGAGATTAGCTATTGCTATG+TGG | - | chr2_2:47132245-47132264 | Msa0254290:CDS | 35.0% |
| ATTGCCTCTTCTAACCTATA+GGG | + | chr2_2:47132281-47132300 | None:intergenic | 35.0% | |
| TATTGCCTCTTCTAACCTAT+AGG | + | chr2_2:47132282-47132301 | None:intergenic | 35.0% | |
| ! | TAAGACAGAAGTATAGGTGT+CGG | - | chr2_2:47132357-47132376 | Msa0254290:CDS | 35.0% |
| ! | GGGCAGTTCTTATTTATTGA+AGG | + | chr2_2:47132445-47132464 | None:intergenic | 35.0% |
| !!! | CTTCACCATTTTTGGAGTAT+CGG | - | chr2_2:47132595-47132614 | Msa0254290:exon | 35.0% |
| !!! | TTCACCATTTTTGGAGTATC+GGG | - | chr2_2:47132596-47132615 | Msa0254290:exon | 35.0% |
| AGGTGATCAACTGAAAGAAA+TGG | - | chr2_2:47132779-47132798 | Msa0254290:intron | 35.0% | |
| TCATTGCAAAGTTGTGTCAA+CGG | + | chr2_2:47132834-47132853 | None:intergenic | 35.0% | |
| GAACGACAACTGTAGTATTT+GGG | + | chr2_2:47132857-47132876 | None:intergenic | 35.0% | |
| AGAACGACAACTGTAGTATT+TGG | + | chr2_2:47132858-47132877 | None:intergenic | 35.0% | |
| TAAACCCTTCAAATGGAGAA+TGG | - | chr2_2:47133027-47133046 | Msa0254290:intron | 35.0% | |
| TCATCCATTCTCCATTTGAA+GGG | + | chr2_2:47133034-47133053 | None:intergenic | 35.0% | |
| AATGCCAGAACAACTAAACA+TGG | - | chr2_2:47133058-47133077 | Msa0254290:intron | 35.0% | |
| CATTCCATGTTTAGTTGTTC+TGG | + | chr2_2:47133065-47133084 | None:intergenic | 35.0% | |
| CAGAACAACTAAACATGGAA+TGG | - | chr2_2:47133063-47133082 | Msa0254290:intron | 35.0% | |
| !! | TCGGTCGTATTTTGAAGAAA+GGG | - | chr2_2:47133222-47133241 | Msa0254290:intron | 35.0% |
| CATGTCTGTAATTCCATACA+AGG | + | chr2_2:47133255-47133274 | None:intergenic | 35.0% | |
| TGTGTGAGAGAATTAGTAAC+TGG | + | chr2_2:47133333-47133352 | None:intergenic | 35.0% | |
| CATCAGTTGAAGTTGTTCAA+GGG | - | chr2_2:47133429-47133448 | Msa0254290:intron | 35.0% | |
| !! | TATAGGACATTTTCTGGCAA+AGG | - | chr2_2:47133671-47133690 | Msa0254290:intron | 35.0% |
| AACTGCAAACATGCTTGATA+AGG | + | chr2_2:47133765-47133784 | None:intergenic | 35.0% | |
| TTAACATTATTGATCGCAGC+AGG | - | chr2_2:47133861-47133880 | Msa0254290:intron | 35.0% | |
| ATAGGTGATACCTTCTCATT+GGG | + | chr2_2:47133976-47133995 | None:intergenic | 35.0% | |
| AAGTCAGCAAATCAAAGCAA+GGG | - | chr2_2:47134024-47134043 | Msa0254290:intron | 35.0% | |
| ! | ACATTCCAAGAGATCTTTTC+TGG | + | chr2_2:47134129-47134148 | None:intergenic | 35.0% |
| AGAAGTAATTCTCCTTCTTG+AGG | + | chr2_2:47134158-47134177 | None:intergenic | 35.0% | |
| ! | CATCGACAAGTAGTTTTTGA+TGG | - | chr2_2:47134456-47134475 | Msa0254290:five_prime_UTR | 35.0% |
| !!! | TAGTTTTTGATGGCCTTGTA+AGG | - | chr2_2:47134466-47134485 | Msa0254290:five_prime_UTR | 35.0% |
| TAAGCTATTAGCAAGGGGTA+AGG | - | chr2_2:47128487-47128506 | Msa0254290:three_prime_UTR | 40.0% | |
| GGCCAACAATTTCATGAACT+TGG | + | chr2_2:47128560-47128579 | None:intergenic | 40.0% | |
| TTCCAAATCTGCCATTGATG+CGG | + | chr2_2:47128581-47128600 | None:intergenic | 40.0% | |
| ! | CATCAAGTGATCTGGTTCAT+TGG | - | chr2_2:47128734-47128753 | Msa0254290:CDS | 40.0% |
| AAGTTCATCGAAAACTGGAG+AGG | - | chr2_2:47128995-47129014 | Msa0254290:CDS | 40.0% | |
| ATGTGTGCTCAGTATCTGAT+AGG | - | chr2_2:47129041-47129060 | Msa0254290:intron | 40.0% | |
| CAGTATCTGATAGGTTCTTG+AGG | - | chr2_2:47129050-47129069 | Msa0254290:intron | 40.0% | |
| AAACAGCATAGAATGCACCA+GGG | + | chr2_2:47129158-47129177 | None:intergenic | 40.0% | |
| TAAACAGCATAGAATGCACC+AGG | + | chr2_2:47129159-47129178 | None:intergenic | 40.0% | |
| ! | GGTGCATTCTATGCTGTTTA+TGG | - | chr2_2:47129159-47129178 | Msa0254290:intron | 40.0% |
| !!! | TACTTGTTTTGGTGCTCTTG+TGG | - | chr2_2:47129442-47129461 | Msa0254290:CDS | 40.0% |
| TGTGGAATAAGTATCACAGG+CGG | - | chr2_2:47129460-47129479 | Msa0254290:CDS | 40.0% | |
| TCATGCATGTAGGGGAAAAA+AGG | + | chr2_2:47129537-47129556 | None:intergenic | 40.0% | |
| CATGACTGCTTACAGACATT+TGG | + | chr2_2:47129574-47129593 | None:intergenic | 40.0% | |
| TGGAGATGCTTCACATTTGT+AGG | + | chr2_2:47129640-47129659 | None:intergenic | 40.0% | |
| GACAGCGAAATAGAAACACA+TGG | - | chr2_2:47129874-47129893 | Msa0254290:CDS | 40.0% | |
| ! | AGGTATGTGCTGTTGCAATA+TGG | - | chr2_2:47130071-47130090 | Msa0254290:CDS | 40.0% |
| !!! | CCCCTTCTTTTTTTCTTGAC+AGG | + | chr2_2:47130324-47130343 | None:intergenic | 40.0% |
| ATAAAGTAGGGGATAGCAGA+TGG | - | chr2_2:47130434-47130453 | Msa0254290:intron | 40.0% | |
| ! | TTGGTGTTCTTGTAGTTTGC+TGG | - | chr2_2:47130488-47130507 | Msa0254290:intron | 40.0% |
| !!! | CAACTTTTGAGATGTTCCAG+GGG | + | chr2_2:47130553-47130572 | None:intergenic | 40.0% |
| !!! | GCAACTTTTGAGATGTTCCA+GGG | + | chr2_2:47130554-47130573 | None:intergenic | 40.0% |
| ! | AATGGGCAGAAACTTTTGTG+AGG | - | chr2_2:47130669-47130688 | Msa0254290:intron | 40.0% |
| !! | TGAGGGTGTTGTATCTTATC+AGG | - | chr2_2:47130749-47130768 | Msa0254290:intron | 40.0% |
| !! | GAGGGTGTTGTATCTTATCA+GGG | - | chr2_2:47130750-47130769 | Msa0254290:intron | 40.0% |
| ACTTGTAACGCTGTAGGTTT+AGG | - | chr2_2:47130984-47131003 | Msa0254290:intron | 40.0% | |
| !! | TTTCTAAAGTAGCTGGGTAG+GGG | + | chr2_2:47131359-47131378 | None:intergenic | 40.0% |
| TGAGAGTCGCACATTAGATA+TGG | - | chr2_2:47131426-47131445 | Msa0254290:intron | 40.0% | |
| TTAACTGGGAATACCCAATG+GGG | - | chr2_2:47131471-47131490 | Msa0254290:intron | 40.0% | |
| AACAAGTTTCCTGATGAGTG+AGG | - | chr2_2:47131597-47131616 | Msa0254290:intron | 40.0% | |
| ACAAATCTACCTCACTCATC+AGG | + | chr2_2:47131609-47131628 | None:intergenic | 40.0% | |
| TGATGAGTGAGGTAGATTTG+TGG | - | chr2_2:47131608-47131627 | Msa0254290:intron | 40.0% | |
| TCAGTAAGACATATCTCCCA+TGG | + | chr2_2:47131724-47131743 | None:intergenic | 40.0% | |
| TTCCCGGGTTTGCAAAATAA+TGG | + | chr2_2:47131823-47131842 | None:intergenic | 40.0% | |
| !! | GTGGTAATGTTTTTGTTCCC+GGG | + | chr2_2:47131838-47131857 | None:intergenic | 40.0% |
| !! | GGTGGTAATGTTTTTGTTCC+CGG | + | chr2_2:47131839-47131858 | None:intergenic | 40.0% |
| ! | GTATCGGTATCGTATCGTAT+CGG | + | chr2_2:47131889-47131908 | None:intergenic | 40.0% |
| GATACGATACGATACCGATA+CGG | - | chr2_2:47131888-47131907 | Msa0254290:intron | 40.0% | |
| GAAACCCTATAGGTTAGAAG+AGG | - | chr2_2:47132274-47132293 | Msa0254290:CDS | 40.0% | |
| AAACAATGACCGATACGTGT+CGG | + | chr2_2:47132497-47132516 | None:intergenic | 40.0% | |
| ! | ATCACGTATCGTATCGGTAT+CGG | - | chr2_2:47132553-47132572 | Msa0254290:CDS | 40.0% |
| !!! | TCACCATTTTTGGAGTATCG+GGG | - | chr2_2:47132597-47132616 | Msa0254290:exon | 40.0% |
| CATACACTGTAGGGATTCAA+TGG | - | chr2_2:47132729-47132748 | Msa0254290:intron | 40.0% | |
| ! | ACTGAGCAAGTTGAGAGAAA+AGG | - | chr2_2:47132759-47132778 | Msa0254290:intron | 40.0% |
| ! | ACGGTTGTTTCAATTCTGGA+TGG | + | chr2_2:47132815-47132834 | None:intergenic | 40.0% |
| ! | GTCAACGGTTGTTTCAATTC+TGG | + | chr2_2:47132819-47132838 | None:intergenic | 40.0% |
| ACTACAGTTGTCGTTCTTAG+TGG | - | chr2_2:47132861-47132880 | Msa0254290:intron | 40.0% | |
| TTCCATCTTTGCGAACTACT+AGG | - | chr2_2:47132928-47132947 | Msa0254290:intron | 40.0% | |
| AACCTAGTAGTTCGCAAAGA+TGG | + | chr2_2:47132933-47132952 | None:intergenic | 40.0% | |
| GTCATCCATTCTCCATTTGA+AGG | + | chr2_2:47133035-47133054 | None:intergenic | 40.0% | |
| GTTTAGTTGTTCTGGCATTG+TGG | + | chr2_2:47133057-47133076 | None:intergenic | 40.0% | |
| ACTTCACTGAAAGAACTCCT+CGG | - | chr2_2:47133203-47133222 | Msa0254290:intron | 40.0% | |
| CTTTCTTCAAAATACGACCG+AGG | + | chr2_2:47133223-47133242 | None:intergenic | 40.0% | |
| !! | CTCGGTCGTATTTTGAAGAA+AGG | - | chr2_2:47133221-47133240 | Msa0254290:intron | 40.0% |
| GTATGGAATTACAGACATGC+AGG | - | chr2_2:47133256-47133275 | Msa0254290:intron | 40.0% | |
| AGACATGCAGGTACTTAAGT+TGG | - | chr2_2:47133268-47133287 | Msa0254290:intron | 40.0% | |
| GACATGCAGGTACTTAAGTT+GGG | - | chr2_2:47133269-47133288 | Msa0254290:intron | 40.0% | |
| GCATCAGTTGAAGTTGTTCA+AGG | - | chr2_2:47133428-47133447 | Msa0254290:intron | 40.0% | |
| AGACTTGCACCAAAAGAAGA+AGG | + | chr2_2:47133919-47133938 | None:intergenic | 40.0% | |
| AGCTAAGTTTCCCAATGAGA+AGG | - | chr2_2:47133963-47133982 | Msa0254290:intron | 40.0% | |
| CATAGGTGATACCTTCTCAT+TGG | + | chr2_2:47133977-47133996 | None:intergenic | 40.0% | |
| CAAGTCAGCAAATCAAAGCA+AGG | - | chr2_2:47134023-47134042 | Msa0254290:intron | 40.0% | |
| AGCAAATAATGTCAACCGCA+CGG | - | chr2_2:47134080-47134099 | Msa0254290:intron | 40.0% | |
| !! | CAAGAGATCTTTTCTGGCAA+AGG | + | chr2_2:47134123-47134142 | None:intergenic | 40.0% |
| CTTTGCCAGAAAAGATCTCT+TGG | - | chr2_2:47134121-47134140 | Msa0254290:intron | 40.0% | |
| AATTCTCCTTCTTGAGGTCA+AGG | + | chr2_2:47134152-47134171 | None:intergenic | 40.0% | |
| AATTACTTCTCGTGTGCTGT+TGG | - | chr2_2:47134168-47134187 | Msa0254290:intron | 40.0% | |
| TGTGTTTACGTTGCGAGTCT+TGG | - | chr2_2:47128406-47128425 | Msa0254290:three_prime_UTR | 45.0% | |
| GTGTTTACGTTGCGAGTCTT+GGG | - | chr2_2:47128407-47128426 | Msa0254290:three_prime_UTR | 45.0% | |
| GAAATTGTTGGCCGCATCAA+TGG | - | chr2_2:47128567-47128586 | Msa0254290:three_prime_UTR | 45.0% | |
| TGCTGTTCCTATACATCACC+TGG | - | chr2_2:47128608-47128627 | Msa0254290:exon | 45.0% | |
| ! | GTGATCTGGTTCATTGGTAC+TGG | - | chr2_2:47128740-47128759 | Msa0254290:CDS | 45.0% |
| AACAGCATAGAATGCACCAG+GGG | + | chr2_2:47129157-47129176 | None:intergenic | 45.0% | |
| GTGCGTAAAAGTCAAGAGTG+CGG | + | chr2_2:47129225-47129244 | None:intergenic | 45.0% | |
| AGACGAGTTCATGCATGTAG+GGG | + | chr2_2:47129545-47129564 | None:intergenic | 45.0% | |
| CAGACGAGTTCATGCATGTA+GGG | + | chr2_2:47129546-47129565 | None:intergenic | 45.0% | |
| TTGCACTTGTCACGTCTTTG+AGG | - | chr2_2:47130264-47130283 | Msa0254290:intron | 45.0% | |
| TGCACTTGTCACGTCTTTGA+GGG | - | chr2_2:47130265-47130284 | Msa0254290:intron | 45.0% | |
| TAGGCTGAGTGGCATAAAGT+AGG | - | chr2_2:47130421-47130440 | Msa0254290:intron | 45.0% | |
| AGGCTGAGTGGCATAAAGTA+GGG | - | chr2_2:47130422-47130441 | Msa0254290:intron | 45.0% | |
| GCAGATGGATGATAAGCTAG+TGG | - | chr2_2:47130449-47130468 | Msa0254290:intron | 45.0% | |
| !!! | GGCAACTTTTGAGATGTTCC+AGG | + | chr2_2:47130555-47130574 | None:intergenic | 45.0% |
| ! | CAGAGCTTTGGCAATTGCTT+CGG | + | chr2_2:47130576-47130595 | None:intergenic | 45.0% |
| TGATGGCATGTTCAGAGCTT+TGG | + | chr2_2:47130588-47130607 | None:intergenic | 45.0% | |
| AAGAGAGAGAGAAGCGACAT+AGG | - | chr2_2:47130609-47130628 | Msa0254290:intron | 45.0% | |
| ! | CAGTGTGGGTTGTTACATGA+TGG | + | chr2_2:47130643-47130662 | None:intergenic | 45.0% |
| CTGTTGTTGAGGCACAGTTA+AGG | - | chr2_2:47131148-47131167 | Msa0254290:intron | 45.0% | |
| GGACAAAACAAGTTCCACCA+CGG | - | chr2_2:47131169-47131188 | Msa0254290:intron | 45.0% | |
| GTCGCACATTAGATATGGCA+TGG | - | chr2_2:47131431-47131450 | Msa0254290:intron | 45.0% | |
| ATCGGTATCGTGTCAGGTAT+CGG | + | chr2_2:47131871-47131890 | None:intergenic | 45.0% | |
| ! | TATCGTATCGGTATCGTGTC+AGG | + | chr2_2:47131877-47131896 | None:intergenic | 45.0% |
| ! | TACGCGTATCGGAGAAGTAT+CGG | + | chr2_2:47132466-47132485 | None:intergenic | 45.0% |
| ATCACGTATCCGACACGTAT+CGG | - | chr2_2:47132485-47132504 | Msa0254290:intron | 45.0% | |
| TACGCGTATCGGAAAAGTAG+CGG | + | chr2_2:47132534-47132553 | None:intergenic | 45.0% | |
| ACGATACGTGATACGCGTAT+CGG | + | chr2_2:47132545-47132564 | None:intergenic | 45.0% | |
| ACGCGTATCACGTATCGTAT+CGG | - | chr2_2:47132547-47132566 | Msa0254290:CDS | 45.0% | |
| ! | TATCGGTATCGGATACGTGT+CGG | - | chr2_2:47132564-47132583 | Msa0254290:CDS | 45.0% |
| AAGCCCCGATACTCCAAAAA+TGG | + | chr2_2:47132603-47132622 | None:intergenic | 45.0% | |
| GTTGTCGTTCTTAGTGGAAG+TGG | - | chr2_2:47132867-47132886 | Msa0254290:intron | 45.0% | |
| !! | GGAATGGGTTGACAGTGTAA+AGG | - | chr2_2:47133079-47133098 | Msa0254290:intron | 45.0% |
| AAAGGGAAGCTTCCCTTGTA+TGG | - | chr2_2:47133239-47133258 | Msa0254290:intron | 45.0% | |
| GAATGTCCTTGACCTCAAGA+AGG | - | chr2_2:47134143-47134162 | Msa0254290:intron | 45.0% | |
| GAACGCACCAGGTGATGTAT+AGG | + | chr2_2:47128618-47128637 | None:intergenic | 50.0% | |
| CTTCCAAATGCTACATCCCC+TGG | - | chr2_2:47129138-47129157 | Msa0254290:intron | 50.0% | |
| TGTGCTCTGTACGCTGTTAC+AGG | - | chr2_2:47129247-47129266 | Msa0254290:CDS | 50.0% | |
| CCAGACGAGTTCATGCATGT+AGG | + | chr2_2:47129547-47129566 | None:intergenic | 50.0% | |
| CCTACATGCATGAACTCGTC+TGG | - | chr2_2:47129544-47129563 | Msa0254290:intron | 50.0% | |
| ! | CTTGTCACGTCTTTGAGGGA+TGG | - | chr2_2:47130269-47130288 | Msa0254290:intron | 50.0% |
| GGCTGAGTGGCATAAAGTAG+GGG | - | chr2_2:47130423-47130442 | Msa0254290:intron | 50.0% | |
| CGCTTCTCTCTCTCTTCTGA+TGG | + | chr2_2:47130605-47130624 | None:intergenic | 50.0% | |
| TGTAACAACCCACACTGCAC+AGG | - | chr2_2:47130646-47130665 | Msa0254290:intron | 50.0% | |
| AACCCACACTGCACAGGAAT+GGG | - | chr2_2:47130652-47130671 | Msa0254290:intron | 50.0% | |
| TCGGTATCGTGTCAGGTATC+GGG | + | chr2_2:47131870-47131889 | None:intergenic | 50.0% | |
| ! | ATTTTCCCGCATCGCCGTAT+CGG | + | chr2_2:47131905-47131924 | None:intergenic | 50.0% |
| TATCGAGGCCGTATCGTATC+GGG | + | chr2_2:47131938-47131957 | None:intergenic | 50.0% | |
| GTATCGAGGCCGTATCGTAT+CGG | + | chr2_2:47131939-47131958 | None:intergenic | 50.0% | |
| ! | GTGGTGACGAGAAACCCTAT+AGG | - | chr2_2:47132264-47132283 | Msa0254290:CDS | 50.0% |
| TAGTCGCATCCGACACGTAT+AGG | - | chr2_2:47132410-47132429 | Msa0254290:intron | 50.0% | |
| !! | ACGCGTATCGGAGAAGTATC+GGG | + | chr2_2:47132465-47132484 | None:intergenic | 50.0% |
| CGGATACGTGATACGCGTAT+CGG | + | chr2_2:47132477-47132496 | None:intergenic | 50.0% | |
| ACGCGTATCGGAAAAGTAGC+GGG | + | chr2_2:47132533-47132552 | None:intergenic | 50.0% | |
| ACTTGGCTAGCAGCAGAGAA+TGG | - | chr2_2:47132996-47133015 | Msa0254290:intron | 50.0% | |
| CTTGGCTAGCAGCAGAGAAT+GGG | - | chr2_2:47132997-47133016 | Msa0254290:intron | 50.0% | |
| ATGCTCCAACATCTCTGCAC+AGG | - | chr2_2:47133392-47133411 | Msa0254290:intron | 50.0% | |
| TTGGACCTGTGCAGAGATGT+TGG | + | chr2_2:47133400-47133419 | None:intergenic | 50.0% | |
| TACTGTGAACAATCTCCCCC+AGG | + | chr2_2:47133617-47133636 | None:intergenic | 50.0% | |
| ! | GAGCCAGAGCCTTCTTCTTT+TGG | - | chr2_2:47133907-47133926 | Msa0254290:intron | 50.0% |
| GCACCAAAAGAAGAAGGCTC+TGG | + | chr2_2:47133913-47133932 | None:intergenic | 50.0% | |
| ATAATGTCAACCGCACGGCA+CGG | - | chr2_2:47134085-47134104 | Msa0254290:intron | 50.0% | |
| ATTTACACTTCCGTGCCGTG+CGG | + | chr2_2:47134098-47134117 | None:intergenic | 50.0% | |
| TACACTTCCATCGTCTGACG+AGG | - | chr2_2:47134215-47134234 | Msa0254290:intron | 50.0% | |
| ! | CTTAGCAATGCTGCTTCCTC+AGG | - | chr2_2:47134332-47134351 | Msa0254290:five_prime_UTR | 50.0% |
| GGCCGCATCAATGGCAGATT+TGG | - | chr2_2:47128576-47128595 | Msa0254290:three_prime_UTR | 55.0% | |
| GCACCAGGGGATGTAGCATT+TGG | + | chr2_2:47129144-47129163 | None:intergenic | 55.0% | |
| GCGGATCAAGGCGAGACTAT+TGG | + | chr2_2:47129660-47129679 | None:intergenic | 55.0% | |
| CAACCCACACTGCACAGGAA+TGG | - | chr2_2:47130651-47130670 | Msa0254290:intron | 55.0% | |
| TGCCCATTCCTGTGCAGTGT+GGG | + | chr2_2:47130657-47130676 | None:intergenic | 55.0% | |
| !! | AGGTATCGGGGCTTCATAGG+TGG | + | chr2_2:47131857-47131876 | None:intergenic | 55.0% |
| !! | GTCAGGTATCGGGGCTTCAT+AGG | + | chr2_2:47131860-47131879 | None:intergenic | 55.0% |
| ! | CGGTATCGTGTCAGGTATCG+GGG | + | chr2_2:47131869-47131888 | None:intergenic | 55.0% |
| ACGATACCGATACGGCGATG+CGG | - | chr2_2:47131896-47131915 | Msa0254290:intron | 55.0% | |
| TCAAGGGAGCCGATCAGTTG+AGG | - | chr2_2:47133445-47133464 | Msa0254290:intron | 55.0% | |
| CAGCTCGCACCTCAACTGAT+CGG | + | chr2_2:47133457-47133476 | None:intergenic | 55.0% | |
| !! | GCGAGCTGCTGGTGTTACAA+AGG | - | chr2_2:47133469-47133488 | Msa0254290:intron | 55.0% |
| AGCAGCCATTGATCGCATCC+TGG | - | chr2_2:47133596-47133615 | Msa0254290:intron | 55.0% | |
| GCAGCCATTGATCGCATCCT+GGG | - | chr2_2:47133597-47133616 | Msa0254290:intron | 55.0% | |
| CAGCCATTGATCGCATCCTG+GGG | - | chr2_2:47133598-47133617 | Msa0254290:intron | 55.0% | |
| AGCCATTGATCGCATCCTGG+GGG | - | chr2_2:47133599-47133618 | Msa0254290:intron | 55.0% | |
| TCAGCAACCTCGTCAGACGA+TGG | + | chr2_2:47134225-47134244 | None:intergenic | 55.0% | |
| !! | CTGGTGCTGCGCAGTCTCTT+GGG | - | chr2_2:47130507-47130526 | Msa0254290:intron | 60.0% |
| !! | TGGTGCTGCGCAGTCTCTTG+GGG | - | chr2_2:47130508-47130527 | Msa0254290:intron | 60.0% |
| CTGCCCATTCCTGTGCAGTG+TGG | + | chr2_2:47130658-47130677 | None:intergenic | 60.0% | |
| TTCCACCACGGCTCGATACC+AGG | - | chr2_2:47131181-47131200 | Msa0254290:intron | 60.0% | |
| ! | TTCCTGGTATCGAGCCGTGG+TGG | + | chr2_2:47131186-47131205 | None:intergenic | 60.0% |
| ! | GTCTTCCTGGTATCGAGCCG+TGG | + | chr2_2:47131189-47131208 | None:intergenic | 60.0% |
| CGATACCGATACGGCGATGC+GGG | - | chr2_2:47131897-47131916 | Msa0254290:intron | 60.0% | |
| TCAGTTGAGGTGCGAGCTGC+TGG | - | chr2_2:47133458-47133477 | Msa0254290:intron | 60.0% | |
| CTCCCCCAGGATGCGATCAA+TGG | + | chr2_2:47133604-47133623 | None:intergenic | 60.0% | |
| !! | GCTGGTGCTGCGCAGTCTCT+TGG | - | chr2_2:47130506-47130525 | Msa0254290:intron | 65.0% |
| CTGCGCAGTCTCTTGGGGCT+GGG | - | chr2_2:47130513-47130532 | Msa0254290:intron | 65.0% | |
| TGCGCAGTCTCTTGGGGCTG+GGG | - | chr2_2:47130514-47130533 | Msa0254290:intron | 65.0% | |
| ! | TCTTGGGGCTGGGGCACTTC+TGG | - | chr2_2:47130523-47130542 | Msa0254290:intron | 65.0% |
| GGGCACTTCTGGTCAACCCC+TGG | - | chr2_2:47130534-47130553 | Msa0254290:intron | 65.0% | |
| GCTGCGCAGTCTCTTGGGGC+TGG | - | chr2_2:47130512-47130531 | Msa0254290:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 47128372 | 47134528 | 47128372 | ID=Msa0254290;Name=Msa0254290 |
| chr2_2 | mRNA | 47128372 | 47134528 | 47128372 | ID=Msa0254290-mRNA-1;Parent=Msa0254290;Name=Msa0254290-mRNA-1;_AED=0.07;_eAED=0.07;_QI=339|0.88|0.8|1|1|1|10|244|485 |
| chr2_2 | exon | 47128372 | 47129020 | 47128372 | ID=Msa0254290-mRNA-1:exon:14374;Parent=Msa0254290-mRNA-1 |
| chr2_2 | exon | 47129208 | 47129306 | 47129208 | ID=Msa0254290-mRNA-1:exon:14373;Parent=Msa0254290-mRNA-1 |
| chr2_2 | exon | 47129410 | 47129540 | 47129410 | ID=Msa0254290-mRNA-1:exon:14372;Parent=Msa0254290-mRNA-1 |
| chr2_2 | exon | 47129623 | 47129710 | 47129623 | ID=Msa0254290-mRNA-1:exon:14371;Parent=Msa0254290-mRNA-1 |
| chr2_2 | exon | 47129800 | 47130159 | 47129800 | ID=Msa0254290-mRNA-1:exon:14370;Parent=Msa0254290-mRNA-1 |
| chr2_2 | exon | 47131649 | 47131766 | 47131649 | ID=Msa0254290-mRNA-1:exon:14369;Parent=Msa0254290-mRNA-1 |
| chr2_2 | exon | 47132210 | 47132397 | 47132210 | ID=Msa0254290-mRNA-1:exon:14368;Parent=Msa0254290-mRNA-1 |
| chr2_2 | exon | 47132539 | 47132639 | 47132539 | ID=Msa0254290-mRNA-1:exon:14367;Parent=Msa0254290-mRNA-1 |
| chr2_2 | exon | 47133632 | 47133680 | 47133632 | ID=Msa0254290-mRNA-1:exon:14366;Parent=Msa0254290-mRNA-1 |
| chr2_2 | exon | 47134271 | 47134528 | 47134271 | ID=Msa0254290-mRNA-1:exon:14365;Parent=Msa0254290-mRNA-1 |
| chr2_2 | five_prime_UTR | 47134271 | 47134528 | 47134271 | ID=Msa0254290-mRNA-1:five_prime_utr;Parent=Msa0254290-mRNA-1 |
| chr2_2 | five_prime_UTR | 47133632 | 47133680 | 47133632 | ID=Msa0254290-mRNA-1:five_prime_utr;Parent=Msa0254290-mRNA-1 |
| chr2_2 | five_prime_UTR | 47132608 | 47132639 | 47132608 | ID=Msa0254290-mRNA-1:five_prime_utr;Parent=Msa0254290-mRNA-1 |
| chr2_2 | CDS | 47132539 | 47132607 | 47132539 | ID=Msa0254290-mRNA-1:cds;Parent=Msa0254290-mRNA-1 |
| chr2_2 | CDS | 47132210 | 47132397 | 47132210 | ID=Msa0254290-mRNA-1:cds;Parent=Msa0254290-mRNA-1 |
| chr2_2 | CDS | 47131649 | 47131766 | 47131649 | ID=Msa0254290-mRNA-1:cds;Parent=Msa0254290-mRNA-1 |
| chr2_2 | CDS | 47129800 | 47130159 | 47129800 | ID=Msa0254290-mRNA-1:cds;Parent=Msa0254290-mRNA-1 |
| chr2_2 | CDS | 47129623 | 47129710 | 47129623 | ID=Msa0254290-mRNA-1:cds;Parent=Msa0254290-mRNA-1 |
| chr2_2 | CDS | 47129410 | 47129540 | 47129410 | ID=Msa0254290-mRNA-1:cds;Parent=Msa0254290-mRNA-1 |
| chr2_2 | CDS | 47129208 | 47129306 | 47129208 | ID=Msa0254290-mRNA-1:cds;Parent=Msa0254290-mRNA-1 |
| chr2_2 | CDS | 47128616 | 47129020 | 47128616 | ID=Msa0254290-mRNA-1:cds;Parent=Msa0254290-mRNA-1 |
| chr2_2 | three_prime_UTR | 47128372 | 47128615 | 47128372 | ID=Msa0254290-mRNA-1:three_prime_utr;Parent=Msa0254290-mRNA-1 |
| Gene Sequence |
| Protein sequence |
