Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1018980 | XP_013448512.1 | 98.911 | 459 | 5 | 0 | 1 | 459 | 1 | 459 | 0.0 | 928 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1018980 | sp|Q9SRT0|PUB9_ARATH | 57.974 | 464 | 186 | 5 | 1 | 459 | 1 | 460 | 0.0 | 521 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1018980 | A0A072TYF9 | 98.911 | 459 | 5 | 0 | 1 | 459 | 1 | 459 | 0.0 | 928 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0011170 | Msa1018980 | 0.801690 | 7.993779e-49 | -8.615850e-47 |
Msa0017510 | Msa1018980 | 0.809967 | 1.456574e-50 | -8.615850e-47 |
Msa0020930 | Msa1018980 | 0.816276 | 6.009799e-52 | -8.615850e-47 |
Msa0029270 | Msa1018980 | 0.800416 | 1.455893e-48 | -8.615850e-47 |
Msa0032090 | Msa1018980 | 0.821539 | 3.826143e-53 | -8.615850e-47 |
Msa0032430 | Msa1018980 | 0.821455 | 4.001607e-53 | -8.615850e-47 |
Msa0040450 | Msa1018980 | 0.803110 | 4.075931e-49 | -8.615850e-47 |
Msa0044260 | Msa1018980 | 0.818612 | 1.790377e-52 | -8.615850e-47 |
Msa0044330 | Msa1018980 | 0.822066 | 2.889341e-53 | -8.615850e-47 |
Msa0045790 | Msa1018980 | 0.801294 | 9.636731e-49 | -8.615850e-47 |
Msa0046160 | Msa1018980 | 0.804164 | 2.463182e-49 | -8.615850e-47 |
Msa0054480 | Msa1018980 | 0.810943 | 8.965497e-51 | -8.615850e-47 |
Msa0068680 | Msa1018980 | 0.817448 | 3.280898e-52 | -8.615850e-47 |
Msa0079110 | Msa1018980 | 0.823772 | 1.157246e-53 | -8.615850e-47 |
Msa0079380 | Msa1018980 | 0.828761 | 7.511332e-55 | -8.615850e-47 |
Msa0080090 | Msa1018980 | 0.808455 | 3.070935e-50 | -8.615850e-47 |
Msa0101700 | Msa1018980 | 0.806923 | 6.497095e-50 | -8.615850e-47 |
Msa0114060 | Msa1018980 | 0.815525 | 8.843331e-52 | -8.615850e-47 |
Msa0116770 | Msa1018980 | 0.809538 | 1.800562e-50 | -8.615850e-47 |
Msa0606730 | Msa1018980 | 0.805178 | 1.513148e-49 | -8.615850e-47 |
Msa0615710 | Msa1018980 | 0.803499 | 3.385502e-49 | -8.615850e-47 |
Msa0616160 | Msa1018980 | 0.828149 | 1.055257e-54 | -8.615850e-47 |
Msa0621490 | Msa1018980 | 0.806460 | 8.137368e-50 | -8.615850e-47 |
Msa0625720 | Msa1018980 | 0.822163 | 2.743563e-53 | -8.615850e-47 |
Msa0636070 | Msa1018980 | 0.803474 | 3.425952e-49 | -8.615850e-47 |
Msa0641670 | Msa1018980 | 0.811010 | 8.670972e-51 | -8.615850e-47 |
Msa0663390 | Msa1018980 | 0.815910 | 7.256486e-52 | -8.615850e-47 |
Msa0688390 | Msa1018980 | 0.821151 | 4.703382e-53 | -8.615850e-47 |
Msa0693380 | Msa1018980 | 0.815169 | 1.060765e-51 | -8.615850e-47 |
Msa0707250 | Msa1018980 | 0.817399 | 3.365086e-52 | -8.615850e-47 |
Msa0735170 | Msa1018980 | 0.806052 | 9.918603e-50 | -8.615850e-47 |
Msa0741840 | Msa1018980 | 0.808158 | 3.553959e-50 | -8.615850e-47 |
Msa0744040 | Msa1018980 | 0.811105 | 8.268419e-51 | -8.615850e-47 |
Msa0753720 | Msa1018980 | 0.803668 | 3.123075e-49 | -8.615850e-47 |
Msa0767300 | Msa1018980 | 0.809666 | 1.690753e-50 | -8.615850e-47 |
Msa0769920 | Msa1018980 | 0.813988 | 1.936424e-51 | -8.615850e-47 |
Msa0770720 | Msa1018980 | 0.804493 | 2.103714e-49 | -8.615850e-47 |
Msa0824660 | Msa1018980 | 0.801366 | 9.316428e-49 | -8.615850e-47 |
Msa0828560 | Msa1018980 | 0.807066 | 6.060720e-50 | -8.615850e-47 |
Msa0831110 | Msa1018980 | 0.804485 | 2.111531e-49 | -8.615850e-47 |
Msa0831850 | Msa1018980 | 0.801262 | 9.780807e-49 | -8.615850e-47 |
Msa0127050 | Msa1018980 | 0.804665 | 1.937405e-49 | -8.615850e-47 |
Msa0136070 | Msa1018980 | 0.824194 | 9.213619e-54 | -8.615850e-47 |
Msa0136100 | Msa1018980 | 0.808314 | 3.291185e-50 | -8.615850e-47 |
Msa0157290 | Msa1018980 | 0.809982 | 1.445161e-50 | -8.615850e-47 |
Msa0159930 | Msa1018980 | 0.810987 | 8.769445e-51 | -8.615850e-47 |
Msa0160550 | Msa1018980 | 0.802069 | 6.682103e-49 | -8.615850e-47 |
Msa0165210 | Msa1018980 | 0.824641 | 7.232228e-54 | -8.615850e-47 |
Msa0165220 | Msa1018980 | 0.825172 | 5.418222e-54 | -8.615850e-47 |
Msa0171540 | Msa1018980 | 0.804921 | 1.712804e-49 | -8.615850e-47 |
Msa0172070 | Msa1018980 | 0.822144 | 2.771173e-53 | -8.615850e-47 |
Msa0192510 | Msa1018980 | 0.809240 | 2.086793e-50 | -8.615850e-47 |
Msa0197660 | Msa1018980 | 0.810462 | 1.139205e-50 | -8.615850e-47 |
Msa0211150 | Msa1018980 | 0.830799 | 2.395291e-55 | -8.615850e-47 |
Msa0212990 | Msa1018980 | 0.824117 | 9.604851e-54 | -8.615850e-47 |
Msa0216910 | Msa1018980 | 0.827235 | 1.750219e-54 | -8.615850e-47 |
Msa0222890 | Msa1018980 | 0.801178 | 1.017800e-48 | -8.615850e-47 |
Msa0367870 | Msa1018980 | 0.810830 | 9.481962e-51 | -8.615850e-47 |
Msa0376350 | Msa1018980 | 0.817050 | 4.032018e-52 | -8.615850e-47 |
Msa0393080 | Msa1018980 | 0.808399 | 3.157596e-50 | -8.615850e-47 |
Msa0402650 | Msa1018980 | 0.820141 | 8.025156e-53 | -8.615850e-47 |
Msa0424790 | Msa1018980 | 0.820522 | 6.560815e-53 | -8.615850e-47 |
Msa0428080 | Msa1018980 | 0.827356 | 1.636945e-54 | -8.615850e-47 |
Msa0440400 | Msa1018980 | 0.808100 | 3.655765e-50 | -8.615850e-47 |
Msa0440750 | Msa1018980 | 0.825317 | 5.006893e-54 | -8.615850e-47 |
Msa0464680 | Msa1018980 | 0.814303 | 1.650272e-51 | -8.615850e-47 |
Msa0465410 | Msa1018980 | 0.804945 | 1.692870e-49 | -8.615850e-47 |
Msa0467490 | Msa1018980 | 0.834870 | 2.334075e-56 | -8.615850e-47 |
Msa0479170 | Msa1018980 | 0.820357 | 7.158325e-53 | -8.615850e-47 |
Msa0481530 | Msa1018980 | 0.813140 | 2.975199e-51 | -8.615850e-47 |
Msa0989360 | Msa1018980 | 0.800131 | 1.663842e-48 | -8.615850e-47 |
Msa0994950 | Msa1018980 | 0.815943 | 7.134474e-52 | -8.615850e-47 |
Msa1003620 | Msa1018980 | 0.811506 | 6.765670e-51 | -8.615850e-47 |
Msa1014540 | Msa1018980 | 0.813565 | 2.400659e-51 | -8.615850e-47 |
Msa1018100 | Msa1018980 | 0.811200 | 7.886676e-51 | -8.615850e-47 |
Msa1018980 | Msa1019000 | 0.825253 | 5.185605e-54 | -8.615850e-47 |
Msa1018980 | Msa1026740 | 0.809762 | 1.611699e-50 | -8.615850e-47 |
Msa1018980 | Msa1031930 | 0.804830 | 1.788903e-49 | -8.615850e-47 |
Msa1018980 | Msa1075540 | 0.801622 | 8.253663e-49 | -8.615850e-47 |
Msa1018980 | Msa1075650 | 0.815895 | 7.313047e-52 | -8.615850e-47 |
Msa1018980 | Msa1082500 | 0.816873 | 4.419077e-52 | -8.615850e-47 |
Msa1018980 | Msa1083840 | 0.801427 | 9.048785e-49 | -8.615850e-47 |
Msa1018980 | Msa1089940 | 0.800812 | 1.208814e-48 | -8.615850e-47 |
Msa1018980 | Msa1100050 | 0.813183 | 2.911515e-51 | -8.615850e-47 |
Msa1018980 | Msa1104090 | 0.838640 | 2.549796e-57 | -8.615850e-47 |
Msa1018980 | Msa1104370 | 0.803856 | 2.855140e-49 | -8.615850e-47 |
Msa1018980 | Msa1121440 | 0.815611 | 8.461148e-52 | -8.615850e-47 |
Msa1018980 | Msa1130550 | 0.804687 | 1.916718e-49 | -8.615850e-47 |
Msa1018980 | Msa1131220 | 0.806417 | 8.311097e-50 | -8.615850e-47 |
Msa1018980 | Msa1142020 | 0.814529 | 1.470700e-51 | -8.615850e-47 |
Msa1018980 | Msa1147710 | 0.988232 | 3.224729e-173 | -8.615850e-47 |
Msa1018980 | Msa1154280 | 0.805446 | 1.330043e-49 | -8.615850e-47 |
Msa1018980 | Msa1171710 | 0.821960 | 3.057111e-53 | -8.615850e-47 |
Msa1018980 | Msa1174040 | 0.803497 | 3.389576e-49 | -8.615850e-47 |
Msa1018980 | Msa1174910 | 0.823513 | 1.330306e-53 | -8.615850e-47 |
Msa1018980 | Msa1203250 | 0.803636 | 3.171612e-49 | -8.615850e-47 |
Msa1018980 | Msa1204530 | 0.804502 | 2.094998e-49 | -8.615850e-47 |
Msa1018980 | Msa1229500 | 0.808943 | 2.415802e-50 | -8.615850e-47 |
Msa1018980 | Msa1242670 | 0.815118 | 1.088701e-51 | -8.615850e-47 |
Msa1018980 | Msa1246510 | 0.807630 | 4.601663e-50 | -8.615850e-47 |
Msa1018980 | Msa1257130 | 0.810900 | 9.158960e-51 | -8.615850e-47 |
Msa1018980 | Msa1270610 | 0.812328 | 4.480471e-51 | -8.615850e-47 |
Msa1018980 | Msa1271990 | 0.815914 | 7.241784e-52 | -8.615850e-47 |
Msa1018980 | Msa1276890 | 0.810174 | 1.313906e-50 | -8.615850e-47 |
Msa1018980 | Msa1284680 | 0.807691 | 4.467266e-50 | -8.615850e-47 |
Msa1018980 | Msa1287460 | 0.823376 | 1.431855e-53 | -8.615850e-47 |
Msa1018980 | Msa1296760 | 0.815756 | 7.852248e-52 | -8.615850e-47 |
Msa1018980 | Msa1298820 | 0.805857 | 1.090053e-49 | -8.615850e-47 |
Msa1018980 | Msa1324100 | 0.803069 | 4.157055e-49 | -8.615850e-47 |
Msa1018980 | Msa1327050 | 0.804463 | 2.134233e-49 | -8.615850e-47 |
Msa1018980 | Msa1330410 | 0.815519 | 8.870752e-52 | -8.615850e-47 |
Msa1018980 | Msa1331000 | 0.813624 | 2.329407e-51 | -8.615850e-47 |
Msa1018980 | Msa1353980 | 0.817030 | 4.074270e-52 | -8.615850e-47 |
Msa1018980 | Msa1366600 | 0.803103 | 4.088781e-49 | -8.615850e-47 |
Msa1018980 | Msa1372760 | 0.806031 | 1.002186e-49 | -8.615850e-47 |
Msa1018980 | Msa1375380 | 0.835706 | 1.435318e-56 | -8.615850e-47 |
Msa1018980 | Msa1393570 | 0.817658 | 2.941641e-52 | -8.615850e-47 |
Msa1018980 | Msa1394380 | 0.819093 | 1.391485e-52 | -8.615850e-47 |
Msa1018980 | Msa1409700 | 0.806571 | 7.710838e-50 | -8.615850e-47 |
Msa1018980 | Msa1415640 | 0.804991 | 1.655510e-49 | -8.615850e-47 |
Msa1018980 | Msa1424750 | 0.809162 | 2.168616e-50 | -8.615850e-47 |
Msa1018980 | Msa1460050 | 0.815808 | 7.646830e-52 | -8.615850e-47 |
Msa1018980 | Msa1463900 | 0.812589 | 3.929653e-51 | -8.615850e-47 |
Msa1018980 | Msa1464810 | 0.825108 | 5.610947e-54 | -8.615850e-47 |
Msa1018980 | Msa1466540 | 0.816560 | 5.193491e-52 | -8.615850e-47 |
Msa0239800 | Msa1018980 | 0.809714 | 1.650731e-50 | -8.615850e-47 |
Msa0258590 | Msa1018980 | 0.809420 | 1.909261e-50 | -8.615850e-47 |
Msa0260680 | Msa1018980 | 0.821988 | 3.012040e-53 | -8.615850e-47 |
Msa0266350 | Msa1018980 | 0.803487 | 3.405917e-49 | -8.615850e-47 |
Msa0280090 | Msa1018980 | 0.830442 | 2.929846e-55 | -8.615850e-47 |
Msa0292120 | Msa1018980 | 0.807663 | 4.528139e-50 | -8.615850e-47 |
Msa0296480 | Msa1018980 | 0.813873 | 2.052714e-51 | -8.615850e-47 |
Msa0309770 | Msa1018980 | 0.825173 | 5.414509e-54 | -8.615850e-47 |
Msa0317510 | Msa1018980 | 0.803603 | 3.222377e-49 | -8.615850e-47 |
Msa0318980 | Msa1018980 | 0.811507 | 6.764959e-51 | -8.615850e-47 |
Msa0330340 | Msa1018980 | 0.816067 | 6.692413e-52 | -8.615850e-47 |
Msa0333030 | Msa1018980 | 0.804500 | 2.097200e-49 | -8.615850e-47 |
Msa0337620 | Msa1018980 | 0.802422 | 5.651651e-49 | -8.615850e-47 |
Msa0345970 | Msa1018980 | 0.818302 | 2.104558e-52 | -8.615850e-47 |
Msa0357340 | Msa1018980 | 0.801635 | 8.203203e-49 | -8.615850e-47 |
Msa0358890 | Msa1018980 | 0.803198 | 3.908826e-49 | -8.615850e-47 |
Msa0363790 | Msa1018980 | 0.808849 | 2.529618e-50 | -8.615850e-47 |
Msa0488560 | Msa1018980 | 0.804535 | 2.062301e-49 | -8.615850e-47 |
Msa0501460 | Msa1018980 | 0.802527 | 5.378128e-49 | -8.615850e-47 |
Msa0511270 | Msa1018980 | 0.815657 | 8.263550e-52 | -8.615850e-47 |
Msa0511310 | Msa1018980 | 0.812349 | 4.433453e-51 | -8.615850e-47 |
Msa0511370 | Msa1018980 | 0.837870 | 4.026927e-57 | -8.615850e-47 |
Msa0516170 | Msa1018980 | 0.809605 | 1.742089e-50 | -8.615850e-47 |
Msa0529890 | Msa1018980 | 0.819001 | 1.460681e-52 | -8.615850e-47 |
Msa0545210 | Msa1018980 | 0.821594 | 3.716236e-53 | -8.615850e-47 |
Msa0569220 | Msa1018980 | 0.820286 | 7.430759e-53 | -8.615850e-47 |
Msa0585560 | Msa1018980 | 0.814851 | 1.248245e-51 | -8.615850e-47 |
Msa0593650 | Msa1018980 | 0.801814 | 7.537427e-49 | -8.615850e-47 |
Msa0596800 | Msa1018980 | 0.817612 | 3.013682e-52 | -8.615850e-47 |
Msa0602390 | Msa1018980 | 0.813964 | 1.960371e-51 | -8.615850e-47 |
Msa0866520 | Msa1018980 | 0.802690 | 4.977817e-49 | -8.615850e-47 |
Msa0871270 | Msa1018980 | 0.806538 | 7.834200e-50 | -8.615850e-47 |
Msa0878500 | Msa1018980 | 0.834352 | 3.149469e-56 | -8.615850e-47 |
Msa0880140 | Msa1018980 | 0.805170 | 1.519203e-49 | -8.615850e-47 |
Msa0880950 | Msa1018980 | 0.805601 | 1.233634e-49 | -8.615850e-47 |
Msa0893800 | Msa1018980 | 0.804342 | 2.261974e-49 | -8.615850e-47 |
Msa0901400 | Msa1018980 | 0.809037 | 2.306579e-50 | -8.615850e-47 |
Msa0935670 | Msa1018980 | 0.806850 | 6.733449e-50 | -8.615850e-47 |
Msa0935910 | Msa1018980 | 0.812593 | 3.920780e-51 | -8.615850e-47 |
Msa0938220 | Msa1018980 | 0.825049 | 5.792813e-54 | -8.615850e-47 |
Msa0944190 | Msa1018980 | 0.834883 | 2.315981e-56 | -8.615850e-47 |
Msa0945970 | Msa1018980 | 0.808083 | 3.686207e-50 | -8.615850e-47 |
Msa0959140 | Msa1018980 | 0.809796 | 1.585387e-50 | -8.615850e-47 |
Msa0964310 | Msa1018980 | 0.809346 | 1.979772e-50 | -8.615850e-47 |
Msa0969600 | Msa1018980 | 0.815173 | 1.058648e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1018980 | MtrunA17_Chr7g0234671 | 98.911 | 459 | 5 | 0 | 1 | 459 | 1 | 459 | 0.0 | 928 |
Msa1018980 | MtrunA17_Chr7g0275081 | 55.580 | 457 | 190 | 4 | 14 | 459 | 6 | 460 | 3.65e-164 | 471 |
Msa1018980 | MtrunA17_Chr1g0189811 | 48.753 | 441 | 215 | 6 | 21 | 457 | 11 | 444 | 1.61e-124 | 369 |
Msa1018980 | MtrunA17_Chr4g0044411 | 38.250 | 400 | 231 | 9 | 62 | 452 | 257 | 649 | 4.08e-83 | 269 |
Msa1018980 | MtrunA17_Chr1g0199321 | 36.933 | 463 | 267 | 10 | 8 | 452 | 166 | 621 | 5.51e-81 | 263 |
Msa1018980 | MtrunA17_Chr4g0031431 | 39.005 | 382 | 219 | 8 | 78 | 452 | 255 | 629 | 1.13e-79 | 260 |
Msa1018980 | MtrunA17_Chr7g0248251 | 36.053 | 380 | 232 | 8 | 75 | 451 | 271 | 642 | 2.43e-64 | 219 |
Msa1018980 | MtrunA17_Chr7g0237931 | 33.409 | 440 | 264 | 10 | 20 | 449 | 185 | 605 | 3.33e-64 | 218 |
Msa1018980 | MtrunA17_Chr5g0437411 | 34.559 | 408 | 234 | 14 | 76 | 457 | 291 | 691 | 5.17e-57 | 200 |
Msa1018980 | MtrunA17_Chr2g0284461 | 33.586 | 396 | 239 | 11 | 76 | 454 | 290 | 678 | 4.99e-54 | 192 |
Msa1018980 | MtrunA17_Chr4g0013091 | 32.908 | 392 | 243 | 10 | 76 | 451 | 311 | 698 | 5.14e-46 | 170 |
Msa1018980 | MtrunA17_Chr4g0059201 | 27.595 | 395 | 266 | 7 | 72 | 450 | 313 | 703 | 3.07e-39 | 150 |
Msa1018980 | MtrunA17_Chr5g0413681 | 29.949 | 394 | 243 | 12 | 80 | 450 | 282 | 665 | 6.27e-37 | 144 |
Msa1018980 | MtrunA17_Chr1g0152561 | 35.273 | 275 | 167 | 7 | 180 | 451 | 70 | 336 | 1.69e-35 | 134 |
Msa1018980 | MtrunA17_Chr3g0106931 | 35.971 | 278 | 169 | 7 | 174 | 449 | 555 | 825 | 3.70e-35 | 139 |
Msa1018980 | MtrunA17_Chr3g0106931 | 38.994 | 159 | 80 | 4 | 1 | 156 | 167 | 311 | 9.05e-23 | 101 |
Msa1018980 | MtrunA17_Chr3g0117851 | 28.986 | 345 | 196 | 8 | 75 | 408 | 272 | 578 | 1.59e-34 | 136 |
Msa1018980 | MtrunA17_Chr1g0183781 | 33.559 | 295 | 184 | 8 | 159 | 449 | 426 | 712 | 1.68e-34 | 137 |
Msa1018980 | MtrunA17_Chr1g0183781 | 41.905 | 105 | 54 | 1 | 40 | 144 | 210 | 307 | 1.99e-21 | 97.4 |
Msa1018980 | MtrunA17_Chr2g0280671 | 29.155 | 367 | 218 | 14 | 80 | 435 | 17 | 352 | 7.98e-33 | 128 |
Msa1018980 | MtrunA17_Chr7g0261371 | 33.893 | 298 | 188 | 7 | 154 | 449 | 496 | 786 | 3.49e-32 | 130 |
Msa1018980 | MtrunA17_Chr7g0261371 | 35.971 | 139 | 79 | 2 | 14 | 152 | 187 | 315 | 6.64e-22 | 99.0 |
Msa1018980 | MtrunA17_Chr3g0134761 | 31.900 | 279 | 185 | 4 | 175 | 451 | 55 | 330 | 1.54e-30 | 120 |
Msa1018980 | MtrunA17_Chr8g0377151 | 24.724 | 453 | 258 | 15 | 66 | 446 | 264 | 705 | 1.18e-26 | 113 |
Msa1018980 | MtrunA17_Chr3g0122721 | 23.380 | 432 | 258 | 12 | 79 | 446 | 281 | 703 | 2.25e-25 | 109 |
Msa1018980 | MtrunA17_Chr4g0048811 | 25.220 | 341 | 216 | 10 | 78 | 404 | 5 | 320 | 1.61e-23 | 100 |
Msa1018980 | MtrunA17_Chr5g0404311 | 25.446 | 448 | 234 | 16 | 63 | 446 | 251 | 662 | 3.77e-23 | 102 |
Msa1018980 | MtrunA17_Chr3g0118001 | 29.032 | 279 | 187 | 6 | 175 | 449 | 214 | 485 | 9.94e-23 | 100 |
Msa1018980 | MtrunA17_Chr4g0044631 | 26.087 | 391 | 267 | 10 | 72 | 449 | 8 | 389 | 2.31e-22 | 99.0 |
Msa1018980 | MtrunA17_Chr2g0290151 | 30.496 | 282 | 183 | 8 | 173 | 450 | 177 | 449 | 8.38e-21 | 94.7 |
Msa1018980 | MtrunA17_Chr5g0420471 | 36.885 | 122 | 62 | 2 | 73 | 179 | 20 | 141 | 1.80e-20 | 93.6 |
Msa1018980 | MtrunA17_Chr8g0373031 | 46.835 | 79 | 42 | 0 | 76 | 154 | 273 | 351 | 2.71e-20 | 94.0 |
Msa1018980 | MtrunA17_Chr6g0479261 | 36.066 | 122 | 63 | 2 | 73 | 179 | 20 | 141 | 5.15e-20 | 92.0 |
Msa1018980 | MtrunA17_Chr3g0110121 | 52.174 | 69 | 33 | 0 | 76 | 144 | 34 | 102 | 6.77e-20 | 91.7 |
Msa1018980 | MtrunA17_Chr5g0400971 | 25.816 | 337 | 226 | 10 | 79 | 407 | 68 | 388 | 7.42e-20 | 91.7 |
Msa1018980 | MtrunA17_Chr8g0384041 | 25.628 | 398 | 269 | 10 | 76 | 452 | 8 | 399 | 1.36e-18 | 87.8 |
Msa1018980 | MtrunA17_Chr1g0198984 | 39.640 | 111 | 62 | 3 | 91 | 196 | 1 | 111 | 1.84e-18 | 80.9 |
Msa1018980 | MtrunA17_Chr1g0152291 | 27.727 | 220 | 141 | 5 | 79 | 294 | 46 | 251 | 1.14e-17 | 85.1 |
Msa1018980 | MtrunA17_Chr7g0275961 | 29.224 | 219 | 126 | 8 | 82 | 296 | 259 | 452 | 2.32e-17 | 85.1 |
Msa1018980 | MtrunA17_Chr1g0177271 | 43.038 | 79 | 39 | 2 | 72 | 144 | 1 | 79 | 1.28e-16 | 81.6 |
Msa1018980 | MtrunA17_Chr5g0434171 | 42.029 | 69 | 40 | 0 | 76 | 144 | 33 | 101 | 1.41e-16 | 81.6 |
Msa1018980 | MtrunA17_Chr6g0451581 | 27.354 | 223 | 158 | 3 | 226 | 446 | 289 | 509 | 1.42e-16 | 82.0 |
Msa1018980 | MtrunA17_Chr1g0177281 | 43.038 | 79 | 39 | 2 | 72 | 144 | 1 | 79 | 1.98e-16 | 81.3 |
Msa1018980 | MtrunA17_Chr7g0267501 | 47.561 | 82 | 37 | 3 | 76 | 151 | 6 | 87 | 3.11e-16 | 80.5 |
Msa1018980 | MtrunA17_Chr1g0177261 | 43.038 | 79 | 39 | 2 | 72 | 144 | 1 | 79 | 5.44e-16 | 79.7 |
Msa1018980 | MtrunA17_Chr3g0129811 | 44.286 | 70 | 39 | 0 | 76 | 145 | 81 | 150 | 1.48e-15 | 79.0 |
Msa1018980 | MtrunA17_Chr3g0144071 | 25.649 | 308 | 193 | 10 | 62 | 337 | 14 | 317 | 4.54e-15 | 77.8 |
Msa1018980 | MtrunA17_Chr8g0346441 | 24.260 | 338 | 223 | 10 | 82 | 391 | 263 | 595 | 2.78e-14 | 75.5 |
Msa1018980 | MtrunA17_Chr4g0025501 | 26.010 | 396 | 218 | 17 | 76 | 404 | 4 | 391 | 1.63e-13 | 72.0 |
Msa1018980 | MtrunA17_Chr2g0322021 | 43.836 | 73 | 37 | 2 | 76 | 144 | 4 | 76 | 1.75e-13 | 72.0 |
Msa1018980 | MtrunA17_Chr1g0196911 | 41.250 | 80 | 45 | 2 | 79 | 157 | 507 | 585 | 1.89e-13 | 73.2 |
Msa1018980 | MtrunA17_Chr5g0412171 | 40.909 | 66 | 39 | 0 | 79 | 144 | 733 | 798 | 1.10e-12 | 70.5 |
Msa1018980 | MtrunA17_Chr7g0247831 | 35.632 | 87 | 56 | 0 | 58 | 144 | 806 | 892 | 1.33e-12 | 70.1 |
Msa1018980 | MtrunA17_Chr1g0177301 | 47.059 | 68 | 34 | 2 | 79 | 144 | 7 | 74 | 2.14e-12 | 68.6 |
Msa1018980 | MtrunA17_Chr7g0214471 | 40.580 | 69 | 40 | 1 | 77 | 144 | 594 | 662 | 4.54e-12 | 68.6 |
Msa1018980 | MtrunA17_Chr2g0328101 | 46.970 | 66 | 35 | 0 | 79 | 144 | 741 | 806 | 6.85e-12 | 67.8 |
Msa1018980 | MtrunA17_Chr1g0202971 | 39.706 | 68 | 41 | 0 | 79 | 146 | 649 | 716 | 2.62e-11 | 65.9 |
Msa1018980 | MtrunA17_Chr8g0390311 | 40.580 | 69 | 40 | 1 | 77 | 144 | 394 | 462 | 2.68e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1018980 | AT3G07360.1 | 57.974 | 464 | 186 | 5 | 1 | 459 | 1 | 460 | 0.0 | 521 |
Msa1018980 | AT3G07360.5 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.57e-124 | 365 |
Msa1018980 | AT3G07360.3 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.57e-124 | 365 |
Msa1018980 | AT3G07360.9 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.57e-124 | 365 |
Msa1018980 | AT3G07360.6 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.57e-124 | 365 |
Msa1018980 | AT3G07360.2 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.57e-124 | 365 |
Msa1018980 | AT3G07360.8 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.57e-124 | 365 |
Msa1018980 | AT3G07360.10 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.57e-124 | 365 |
Msa1018980 | AT3G07360.7 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.57e-124 | 365 |
Msa1018980 | AT3G07360.4 | 59.692 | 325 | 126 | 3 | 140 | 459 | 1 | 325 | 2.57e-124 | 365 |
Msa1018980 | AT5G18320.1 | 42.982 | 456 | 220 | 12 | 21 | 453 | 12 | 450 | 6.86e-100 | 307 |
Msa1018980 | AT1G23030.1 | 38.718 | 390 | 226 | 8 | 66 | 451 | 229 | 609 | 1.54e-80 | 261 |
Msa1018980 | AT3G54850.1 | 36.575 | 473 | 272 | 11 | 6 | 458 | 165 | 629 | 2.62e-80 | 261 |
Msa1018980 | AT5G18340.1 | 38.901 | 455 | 234 | 14 | 19 | 447 | 16 | 452 | 5.61e-80 | 255 |
Msa1018980 | AT3G46510.1 | 36.952 | 433 | 247 | 11 | 27 | 452 | 217 | 630 | 3.72e-77 | 253 |
Msa1018980 | AT1G71020.2 | 37.221 | 403 | 235 | 10 | 60 | 451 | 77 | 472 | 1.36e-76 | 247 |
Msa1018980 | AT1G71020.1 | 37.221 | 403 | 235 | 10 | 60 | 451 | 225 | 620 | 7.60e-75 | 247 |
Msa1018980 | AT2G28830.1 | 38.120 | 383 | 222 | 7 | 79 | 451 | 185 | 562 | 2.58e-74 | 244 |
Msa1018980 | AT5G18330.1 | 37.018 | 389 | 226 | 7 | 76 | 451 | 63 | 445 | 2.78e-65 | 217 |
Msa1018980 | AT5G42340.1 | 34.961 | 389 | 234 | 10 | 72 | 451 | 278 | 656 | 2.48e-58 | 203 |
Msa1018980 | AT5G01830.1 | 28.913 | 460 | 286 | 15 | 12 | 451 | 207 | 645 | 1.22e-44 | 166 |
Msa1018980 | AT1G29340.1 | 31.486 | 397 | 239 | 13 | 76 | 451 | 303 | 687 | 6.60e-43 | 161 |
Msa1018980 | AT2G23140.3 | 36.496 | 274 | 165 | 7 | 175 | 446 | 357 | 623 | 3.66e-39 | 150 |
Msa1018980 | AT2G23140.3 | 53.125 | 64 | 30 | 0 | 81 | 144 | 44 | 107 | 8.17e-19 | 89.7 |
Msa1018980 | AT2G23140.5 | 36.496 | 274 | 165 | 7 | 175 | 446 | 357 | 623 | 3.66e-39 | 150 |
Msa1018980 | AT2G23140.5 | 53.125 | 64 | 30 | 0 | 81 | 144 | 44 | 107 | 8.17e-19 | 89.7 |
Msa1018980 | AT2G23140.1 | 36.496 | 274 | 165 | 7 | 175 | 446 | 549 | 815 | 5.47e-39 | 150 |
Msa1018980 | AT2G23140.1 | 34.899 | 149 | 79 | 4 | 7 | 152 | 174 | 307 | 8.95e-19 | 89.7 |
Msa1018980 | AT2G23140.2 | 36.496 | 274 | 165 | 7 | 175 | 446 | 546 | 812 | 6.26e-39 | 150 |
Msa1018980 | AT2G23140.2 | 34.899 | 149 | 79 | 4 | 7 | 152 | 171 | 304 | 9.09e-19 | 89.7 |
Msa1018980 | AT2G23140.4 | 36.496 | 274 | 165 | 7 | 175 | 446 | 546 | 812 | 6.26e-39 | 150 |
Msa1018980 | AT2G23140.4 | 34.899 | 149 | 79 | 4 | 7 | 152 | 171 | 304 | 9.09e-19 | 89.7 |
Msa1018980 | AT5G67340.1 | 27.542 | 472 | 243 | 14 | 76 | 454 | 238 | 703 | 4.28e-38 | 147 |
Msa1018980 | AT5G67340.2 | 27.542 | 472 | 243 | 14 | 76 | 454 | 238 | 703 | 4.28e-38 | 147 |
Msa1018980 | AT3G01400.1 | 33.562 | 292 | 184 | 7 | 170 | 459 | 65 | 348 | 1.70e-35 | 135 |
Msa1018980 | AT4G21350.1 | 30.347 | 346 | 227 | 9 | 78 | 420 | 5 | 339 | 4.92e-33 | 129 |
Msa1018980 | AT5G58680.1 | 34.545 | 275 | 170 | 7 | 180 | 451 | 72 | 339 | 4.57e-31 | 123 |
Msa1018980 | AT1G60190.1 | 26.382 | 398 | 252 | 14 | 80 | 450 | 280 | 663 | 7.99e-30 | 123 |
Msa1018980 | AT3G54790.2 | 36.406 | 217 | 133 | 5 | 232 | 446 | 495 | 708 | 8.65e-28 | 117 |
Msa1018980 | AT3G54790.2 | 49.333 | 75 | 38 | 0 | 70 | 144 | 194 | 268 | 9.70e-21 | 95.9 |
Msa1018980 | AT3G54790.3 | 36.406 | 217 | 133 | 5 | 232 | 446 | 531 | 744 | 1.01e-27 | 117 |
Msa1018980 | AT3G54790.3 | 49.333 | 75 | 38 | 0 | 70 | 144 | 230 | 304 | 1.31e-20 | 95.5 |
Msa1018980 | AT3G54790.1 | 36.406 | 217 | 133 | 5 | 232 | 446 | 531 | 744 | 1.01e-27 | 117 |
Msa1018980 | AT3G54790.1 | 49.333 | 75 | 38 | 0 | 70 | 144 | 230 | 304 | 1.31e-20 | 95.5 |
Msa1018980 | AT3G19380.1 | 28.056 | 360 | 222 | 14 | 72 | 407 | 8 | 354 | 1.06e-27 | 114 |
Msa1018980 | AT1G10560.1 | 26.718 | 393 | 258 | 14 | 80 | 450 | 290 | 674 | 9.60e-27 | 114 |
Msa1018980 | AT1G49780.1 | 26.303 | 403 | 262 | 11 | 72 | 450 | 8 | 399 | 1.38e-25 | 108 |
Msa1018980 | AT1G27910.1 | 27.113 | 284 | 147 | 9 | 79 | 307 | 280 | 558 | 1.29e-23 | 104 |
Msa1018980 | AT5G40140.1 | 27.477 | 222 | 158 | 2 | 231 | 450 | 286 | 506 | 6.13e-22 | 99.0 |
Msa1018980 | AT1G66160.1 | 53.623 | 69 | 32 | 0 | 76 | 144 | 31 | 99 | 4.10e-21 | 95.9 |
Msa1018980 | AT5G37490.1 | 48.148 | 81 | 42 | 0 | 76 | 156 | 29 | 109 | 1.22e-20 | 94.4 |
Msa1018980 | AT1G67530.3 | 47.297 | 74 | 39 | 0 | 79 | 152 | 273 | 346 | 1.90e-19 | 91.3 |
Msa1018980 | AT1G24330.1 | 47.222 | 72 | 38 | 0 | 79 | 150 | 276 | 347 | 1.92e-19 | 92.0 |
Msa1018980 | AT1G24330.2 | 47.222 | 72 | 38 | 0 | 79 | 150 | 276 | 347 | 1.92e-19 | 92.0 |
Msa1018980 | AT1G67530.2 | 47.297 | 74 | 39 | 0 | 79 | 152 | 273 | 346 | 2.10e-19 | 91.7 |
Msa1018980 | AT1G67530.1 | 47.297 | 74 | 39 | 0 | 79 | 152 | 273 | 346 | 2.10e-19 | 91.7 |
Msa1018980 | AT1G67530.4 | 47.297 | 74 | 39 | 0 | 79 | 152 | 273 | 346 | 2.10e-19 | 91.7 |
Msa1018980 | AT5G62560.1 | 29.091 | 220 | 150 | 4 | 231 | 446 | 292 | 509 | 3.13e-19 | 90.9 |
Msa1018980 | AT4G16490.1 | 31.206 | 282 | 183 | 8 | 173 | 450 | 187 | 461 | 3.75e-19 | 90.1 |
Msa1018980 | AT5G65200.1 | 26.882 | 279 | 186 | 6 | 180 | 447 | 235 | 506 | 3.26e-18 | 87.8 |
Msa1018980 | AT5G65920.1 | 25.588 | 340 | 197 | 11 | 78 | 414 | 60 | 346 | 3.30e-18 | 87.0 |
Msa1018980 | AT5G65920.2 | 25.588 | 340 | 197 | 11 | 78 | 414 | 60 | 346 | 3.30e-18 | 87.0 |
Msa1018980 | AT2G35930.1 | 25.357 | 280 | 197 | 6 | 72 | 345 | 6 | 279 | 9.58e-18 | 85.5 |
Msa1018980 | AT5G64660.1 | 45.714 | 70 | 38 | 0 | 76 | 145 | 8 | 77 | 2.03e-17 | 84.7 |
Msa1018980 | AT3G18710.1 | 45.946 | 74 | 40 | 0 | 76 | 149 | 10 | 83 | 4.02e-17 | 83.6 |
Msa1018980 | AT3G52450.1 | 44.595 | 74 | 40 | 1 | 72 | 144 | 1 | 74 | 5.10e-17 | 83.6 |
Msa1018980 | AT3G47820.1 | 26.838 | 272 | 186 | 7 | 185 | 449 | 221 | 486 | 1.05e-16 | 82.8 |
Msa1018980 | AT5G09800.1 | 46.377 | 69 | 37 | 0 | 77 | 145 | 10 | 78 | 8.25e-16 | 79.7 |
Msa1018980 | AT4G36550.1 | 42.308 | 78 | 45 | 0 | 75 | 152 | 216 | 293 | 1.18e-15 | 80.1 |
Msa1018980 | AT3G49810.1 | 24.601 | 313 | 181 | 8 | 78 | 387 | 64 | 324 | 1.00e-14 | 76.6 |
Msa1018980 | AT1G76390.1 | 23.562 | 365 | 223 | 13 | 62 | 384 | 10 | 360 | 1.07e-13 | 73.9 |
Msa1018980 | AT1G76390.2 | 23.562 | 365 | 223 | 13 | 62 | 384 | 10 | 360 | 1.07e-13 | 73.9 |
Msa1018980 | AT1G01680.1 | 43.077 | 65 | 37 | 0 | 80 | 144 | 235 | 299 | 4.97e-13 | 70.1 |
Msa1018980 | AT5G57035.1 | 35.000 | 100 | 65 | 0 | 58 | 157 | 688 | 787 | 8.09e-13 | 71.2 |
Msa1018980 | AT1G01660.2 | 40.909 | 66 | 39 | 0 | 79 | 144 | 499 | 564 | 8.84e-13 | 70.9 |
Msa1018980 | AT1G01660.1 | 40.909 | 66 | 39 | 0 | 79 | 144 | 498 | 563 | 8.90e-13 | 70.9 |
Msa1018980 | AT2G45910.2 | 34.862 | 109 | 69 | 1 | 36 | 144 | 723 | 829 | 1.60e-12 | 70.5 |
Msa1018980 | AT2G45910.1 | 34.862 | 109 | 69 | 1 | 36 | 144 | 723 | 829 | 1.60e-12 | 70.5 |
Msa1018980 | AT2G45920.1 | 30.952 | 126 | 71 | 2 | 28 | 144 | 273 | 391 | 2.66e-12 | 68.6 |
Msa1018980 | AT1G20780.1 | 22.255 | 337 | 227 | 9 | 80 | 384 | 25 | 358 | 8.10e-12 | 68.2 |
Msa1018980 | AT1G20780.2 | 22.255 | 337 | 227 | 9 | 80 | 384 | 25 | 358 | 8.10e-12 | 68.2 |
Msa1018980 | AT1G20780.3 | 22.255 | 337 | 227 | 9 | 80 | 384 | 25 | 358 | 8.10e-12 | 68.2 |
Msa1018980 | AT3G61390.4 | 40.909 | 66 | 39 | 0 | 79 | 144 | 279 | 344 | 8.15e-12 | 67.0 |
Msa1018980 | AT3G61390.2 | 40.909 | 66 | 39 | 0 | 79 | 144 | 354 | 419 | 9.64e-12 | 67.0 |
Msa1018980 | AT3G11840.1 | 44.286 | 70 | 37 | 2 | 76 | 144 | 8 | 76 | 1.24e-11 | 67.0 |
Msa1018980 | AT5G65500.1 | 39.394 | 66 | 40 | 0 | 79 | 144 | 716 | 781 | 1.33e-11 | 67.4 |
Msa1018980 | AT5G65500.2 | 39.394 | 66 | 40 | 0 | 79 | 144 | 724 | 789 | 1.42e-11 | 67.4 |
Msa1018980 | AT1G56040.1 | 41.538 | 65 | 38 | 0 | 79 | 143 | 354 | 418 | 3.75e-11 | 65.1 |
Msa1018980 | AT1G56030.1 | 41.538 | 65 | 38 | 0 | 79 | 143 | 324 | 388 | 5.10e-11 | 64.7 |
Find 78 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCTATCATTTCTCTTATA+AGG | 0.197429 | 7_1:-40002644 | None:intergenic |
CACATAGCTTCACTTTATTC+AGG | 0.262248 | 7_1:-40003782 | None:intergenic |
GATCCTGTCATTGTTGCTTC+TGG | 0.279652 | 7_1:+40001271 | Msa1018980:CDS |
CAACTCCTTCTTCAACTCTA+AGG | 0.282213 | 7_1:-40001047 | None:intergenic |
ATACTATCTCCTTCACAAAT+TGG | 0.282392 | 7_1:-40002897 | None:intergenic |
ATTTCTCTTATAAGGTGATT+TGG | 0.300937 | 7_1:-40002636 | None:intergenic |
ATCATAAACATGGCAAAATC+AGG | 0.306644 | 7_1:+40000986 | Msa1018980:exon |
TCACATCTTCTTGAAGTTCA+TGG | 0.317630 | 7_1:-40002923 | None:intergenic |
GATGGTTTAATGCTGGAAAT+AGG | 0.321814 | 7_1:+40002568 | Msa1018980:CDS |
AGTGGACATTTGAATTCATC+TGG | 0.326095 | 7_1:-40001229 | None:intergenic |
GCTTTCTTCAACATAACTTC+TGG | 0.328306 | 7_1:-40001025 | None:intergenic |
CGGTGCGGTTAGAGTGATTA+TGG | 0.334739 | 7_1:+40003253 | Msa1018980:CDS |
ATCCAAGTTGAGGGAAATAA+AGG | 0.367050 | 7_1:+40003472 | Msa1018980:CDS |
AAAACCGCTTATCGACCTAT+TGG | 0.373774 | 7_1:+40003139 | Msa1018980:CDS |
CAAATTGGCTTAAGCAATTG+AGG | 0.379491 | 7_1:-40002882 | None:intergenic |
ATATACCTTGAAAGAGAGTC+TGG | 0.380179 | 7_1:-40003635 | None:intergenic |
AGGGATTCCCTTCTTCCAAT+AGG | 0.395833 | 7_1:-40003154 | None:intergenic |
TTCCTTTATTTCCCTCAACT+TGG | 0.403611 | 7_1:-40003474 | None:intergenic |
CTCCAAGCTCTGCCATTTCA+AGG | 0.408039 | 7_1:-40003352 | None:intergenic |
TGTCATTGTTGCTTCTGGTC+AGG | 0.408833 | 7_1:+40001276 | Msa1018980:CDS |
GAGAAAAGAATGTACACAAT+TGG | 0.408972 | 7_1:-40003724 | None:intergenic |
CATAAAGACATATAGTTTGA+AGG | 0.418853 | 7_1:-40003445 | None:intergenic |
GAGCTCGTGTGAACGCAATA+AGG | 0.419696 | 7_1:+40003406 | Msa1018980:CDS |
ATTCAAAGATGGTTTAATGC+TGG | 0.420712 | 7_1:+40002561 | Msa1018980:CDS |
CTCAATGCCTTCATGAGGAT+TGG | 0.426057 | 7_1:-40003017 | None:intergenic |
GAATCCCAGACTCTCTTTCA+AGG | 0.437864 | 7_1:+40003630 | Msa1018980:three_prime_UTR |
GAAAGAGAGTCTGGGATTCA+AGG | 0.439393 | 7_1:-40003626 | None:intergenic |
CGCATAATGCTTAGCAAACA+AGG | 0.449211 | 7_1:-40003380 | None:intergenic |
CTAGTGCTGATAACGTGAAA+AGG | 0.450231 | 7_1:-40003079 | None:intergenic |
ATTAGTTACATTAGCGATGA+AGG | 0.450519 | 7_1:+40002705 | Msa1018980:CDS |
AGGATCTCTCATAAATTCCT+TGG | 0.453978 | 7_1:-40001254 | None:intergenic |
GAAAAGGGTTGCTGCAGCAT+TGG | 0.459856 | 7_1:-40003063 | None:intergenic |
TCAGAAGGCTGTCCTTGAAA+TGG | 0.461901 | 7_1:+40003340 | Msa1018980:CDS |
GTCCTTGAAATGGCAGAGCT+TGG | 0.465269 | 7_1:+40003350 | Msa1018980:CDS |
ATGAGGATTGGAATTACCAT+TGG | 0.468277 | 7_1:-40003005 | None:intergenic |
GTGTACCTTCAAGTTATTGA+AGG | 0.468791 | 7_1:+40003667 | Msa1018980:three_prime_UTR |
TTAAACCATCTTTGAATGAA+AGG | 0.473997 | 7_1:-40002555 | None:intergenic |
ATAGACCTTTCATTCAAAGA+TGG | 0.475990 | 7_1:+40002550 | Msa1018980:CDS |
CTCATAAATTCCTTGGAAAG+TGG | 0.479852 | 7_1:-40001247 | None:intergenic |
CCTTCTGATGAGTCGAAAGT+AGG | 0.486238 | 7_1:-40003325 | None:intergenic |
AGCAACATCCTTCATAGCTA+AGG | 0.487743 | 7_1:-40003174 | None:intergenic |
AGGGAATCCCTTAGCTATGA+AGG | 0.488930 | 7_1:+40003166 | Msa1018980:CDS |
GAGAGAACTTGATGAGTTTG+AGG | 0.500944 | 7_1:-40002597 | None:intergenic |
GACTCAAACAAAGAGCTCAT+AGG | 0.501869 | 7_1:+40003101 | Msa1018980:CDS |
GAAAGCCTTAGAGTTGAAGA+AGG | 0.502406 | 7_1:+40001042 | Msa1018980:CDS |
GTGATTCGTCGACGTGAACT+CGG | 0.504524 | 7_1:-40003289 | None:intergenic |
ATTCAAATGTCCACTTTCCA+AGG | 0.523076 | 7_1:+40001237 | Msa1018980:CDS |
CTTATCGACCTATTGGAAGA+AGG | 0.525124 | 7_1:+40003146 | Msa1018980:CDS |
GTTGAGGGAAATAAAGGAAG+AGG | 0.528465 | 7_1:+40003478 | Msa1018980:CDS |
TAGTGCTGATAACGTGAAAA+GGG | 0.532860 | 7_1:-40003078 | None:intergenic |
TGACCAGAAGCAACAATGAC+AGG | 0.534069 | 7_1:-40001274 | None:intergenic |
TCATAAACATGGCAAAATCA+GGG | 0.534668 | 7_1:+40000987 | Msa1018980:exon |
TTATGATAGATCCAAGTTGA+GGG | 0.541455 | 7_1:+40003463 | Msa1018980:CDS |
CTTCTGATGAGTCGAAAGTA+GGG | 0.555075 | 7_1:-40003324 | None:intergenic |
TTTATGATAGATCCAAGTTG+AGG | 0.556104 | 7_1:+40003462 | Msa1018980:CDS |
TTGCTTAAGCCAATTTGTGA+AGG | 0.557316 | 7_1:+40002888 | Msa1018980:CDS |
GGTAATTCCAATCCTCATGA+AGG | 0.566880 | 7_1:+40003010 | Msa1018980:CDS |
GCAACATCCTTCATAGCTAA+GGG | 0.568346 | 7_1:-40003173 | None:intergenic |
TTATCGACCTATTGGAAGAA+GGG | 0.569945 | 7_1:+40003147 | Msa1018980:CDS |
GTGGACATTTGAATTCATCT+GGG | 0.582625 | 7_1:-40001228 | None:intergenic |
AATTCTTGAGAGACTGCATA+GGG | 0.582826 | 7_1:+40003571 | Msa1018980:CDS |
CCTACTTTCGACTCATCAGA+AGG | 0.583772 | 7_1:+40003325 | Msa1018980:CDS |
CTCATGAAGGCATTGAGATG+TGG | 0.589595 | 7_1:+40003023 | Msa1018980:CDS |
TATATCTTCATCATCAACAA+TGG | 0.590547 | 7_1:-40001086 | None:intergenic |
CACATCTCAATGCCTTCATG+AGG | 0.603776 | 7_1:-40003022 | None:intergenic |
GAATTCTTGAGAGACTGCAT+AGG | 0.617958 | 7_1:+40003570 | Msa1018980:CDS |
ACAAGTGGCTGAAATTCCAA+TGG | 0.623306 | 7_1:+40002989 | Msa1018980:CDS |
TATACCTTGAAAGAGAGTCT+GGG | 0.635590 | 7_1:-40003634 | None:intergenic |
TGACAACAACAAGAAACAAG+TGG | 0.636281 | 7_1:+40002974 | Msa1018980:CDS |
TCATTGGATCATCATAAACA+TGG | 0.639347 | 7_1:+40000976 | Msa1018980:exon |
AGGGCTAAGAGAAAAGCTAG+TGG | 0.642044 | 7_1:+40003548 | Msa1018980:CDS |
ATGTGGAACAATCGAAACAC+GGG | 0.642812 | 7_1:+40003040 | Msa1018980:CDS |
GATGTGGAACAATCGAAACA+CGG | 0.647457 | 7_1:+40003039 | Msa1018980:CDS |
CATAAACATGGCAAAATCAG+GGG | 0.649317 | 7_1:+40000988 | Msa1018980:exon |
GATGAGTCGAAAGTAGGGCA+AGG | 0.653116 | 7_1:-40003319 | None:intergenic |
TCTTCCAATAGGTCGATAAG+CGG | 0.656229 | 7_1:-40003143 | None:intergenic |
AAAGCAATAGCAGTGAAAGA+CGG | 0.662494 | 7_1:+40003233 | Msa1018980:CDS |
AATAGCAGTGAAAGACGGTG+CGG | 0.724317 | 7_1:+40003238 | Msa1018980:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TATTCAATATTTTAATTTTC+TGG | + | chr7_1:40000918-40000937 | Msa1018980:five_prime_UTR | 10.0% |
!!! | ATTCAATATTTTAATTTTCT+GGG | + | chr7_1:40000919-40000938 | Msa1018980:five_prime_UTR | 10.0% |
!! | ATTGAATTAAAATTAACTAA+AGG | + | chr7_1:40001554-40001573 | Msa1018980:intron | 10.0% |
!! | TTGAATTAAAATTAACTAAA+GGG | + | chr7_1:40001555-40001574 | Msa1018980:intron | 10.0% |
!! | TTCATTAATTATCATACATT+AGG | + | chr7_1:40001478-40001497 | Msa1018980:intron | 15.0% |
!! | TATAGAAATATACATTTCTA+AGG | - | chr7_1:40001727-40001746 | None:intergenic | 15.0% |
!!! | GAAGAAAAAAAAATCTATTT+TGG | - | chr7_1:40001863-40001882 | None:intergenic | 15.0% |
!!! | AATGATGATTTAAAACAAAT+TGG | + | chr7_1:40002261-40002280 | Msa1018980:intron | 15.0% |
!!! | TTTATTTTGTTTACCTTTTA+TGG | + | chr7_1:40002309-40002328 | Msa1018980:intron | 15.0% |
!! | TATCATACATTAGGAAAAAT+TGG | + | chr7_1:40001487-40001506 | Msa1018980:intron | 20.0% |
!! | ATAAAAAATCCATTTCTGTT+AGG | - | chr7_1:40001523-40001542 | None:intergenic | 20.0% |
!!! | GATATATAAGATATTGATTC+TGG | + | chr7_1:40001583-40001602 | Msa1018980:intron | 20.0% |
!! | TGATAAGTCATTTCATTATT+TGG | + | chr7_1:40001797-40001816 | Msa1018980:intron | 20.0% |
!! | TATCATGTATTAACCATAAA+AGG | - | chr7_1:40002325-40002344 | None:intergenic | 20.0% |
!!! | ATACATGATATTTTAACAAG+TGG | + | chr7_1:40002335-40002354 | Msa1018980:intron | 20.0% |
!! | TCTAATAATCACAAATTGTT+TGG | + | chr7_1:40002358-40002377 | Msa1018980:intron | 20.0% |
!! | CTAATAATCACAAATTGTTT+GGG | + | chr7_1:40002359-40002378 | Msa1018980:intron | 20.0% |
!! | TTTCTATCATTTCTCTTATA+AGG | - | chr7_1:40002647-40002666 | None:intergenic | 20.0% |
!! | TAAGAGAAATGATAGAAAAA+TGG | + | chr7_1:40002649-40002668 | Msa1018980:CDS | 20.0% |
!! | CTTTTTGTCTCTAAATTCAT+TGG | + | chr7_1:40000960-40000979 | Msa1018980:five_prime_UTR | 25.0% |
! | TATATCTTCATCATCAACAA+TGG | - | chr7_1:40001089-40001108 | None:intergenic | 25.0% |
! | GAGAAAATGTTGAAAACATA+AGG | + | chr7_1:40001376-40001395 | Msa1018980:intron | 25.0% |
! | TAAAATGTTCCTAACAGAAA+TGG | + | chr7_1:40001511-40001530 | Msa1018980:intron | 25.0% |
!!! | TAAGATATTGATTCTGGTTT+TGG | + | chr7_1:40001589-40001608 | Msa1018980:intron | 25.0% |
!!! | TTTTTGTTTATCTCTTTTGC+TGG | + | chr7_1:40001613-40001632 | Msa1018980:intron | 25.0% |
! | TTGGTACTTTATTCTATGTT+TGG | + | chr7_1:40001640-40001659 | Msa1018980:intron | 25.0% |
! | ATATATAATGTGTGTGTAGA+TGG | + | chr7_1:40001973-40001992 | Msa1018980:intron | 25.0% |
!! | AAGGCATCAATGTTAAAATT+GGG | - | chr7_1:40002158-40002177 | None:intergenic | 25.0% |
!!! | AAAGAAAAAGTAGTTTTGGT+GGG | - | chr7_1:40002182-40002201 | None:intergenic | 25.0% |
!!! | AAAAGAAAAAGTAGTTTTGG+TGG | - | chr7_1:40002183-40002202 | None:intergenic | 25.0% |
!! | GAGAAAAGAAAAAGTAGTTT+TGG | - | chr7_1:40002186-40002205 | None:intergenic | 25.0% |
!! | AAACAAATTGGAGATTTTTC+TGG | + | chr7_1:40002273-40002292 | Msa1018980:intron | 25.0% |
!! | ACAATACATGACATTTTTGT+TGG | + | chr7_1:40002506-40002525 | Msa1018980:intron | 25.0% |
! | TTAAACCATCTTTGAATGAA+AGG | - | chr7_1:40002558-40002577 | None:intergenic | 25.0% |
! | ATTTCTCTTATAAGGTGATT+TGG | - | chr7_1:40002639-40002658 | None:intergenic | 25.0% |
! | GAAAAATGGTCTAAAAATCA+AGG | + | chr7_1:40002663-40002682 | Msa1018980:CDS | 25.0% |
! | CATAAAGACATATAGTTTGA+AGG | - | chr7_1:40003448-40003467 | None:intergenic | 25.0% |
!! | TTTTACCTTCAATAACTTGA+AGG | - | chr7_1:40003675-40003694 | None:intergenic | 25.0% |
TCATTGGATCATCATAAACA+TGG | + | chr7_1:40000976-40000995 | Msa1018980:exon | 30.0% | |
ATCATAAACATGGCAAAATC+AGG | + | chr7_1:40000986-40001005 | Msa1018980:exon | 30.0% | |
TCATAAACATGGCAAAATCA+GGG | + | chr7_1:40000987-40001006 | Msa1018980:exon | 30.0% | |
! | TATCTCTTTTGCTGGAATTT+TGG | + | chr7_1:40001621-40001640 | Msa1018980:intron | 30.0% |
CTATCTTTACCATACCTTTA+TGG | - | chr7_1:40001669-40001688 | None:intergenic | 30.0% | |
AGGTATGGTAAAGATAGAAA+AGG | + | chr7_1:40001672-40001691 | Msa1018980:intron | 30.0% | |
GAGCATTAAACAACAAAAAC+AGG | - | chr7_1:40001885-40001904 | None:intergenic | 30.0% | |
! | CTTTGTGTAAAACTTTTGAC+TGG | + | chr7_1:40002079-40002098 | Msa1018980:intron | 30.0% |
!!! | TTTTGACTGGTTTTCTCAAA+AGG | + | chr7_1:40002092-40002111 | Msa1018980:intron | 30.0% |
!!! | TTTGACTGGTTTTCTCAAAA+GGG | + | chr7_1:40002093-40002112 | Msa1018980:intron | 30.0% |
CAATGTTAAAATTGGGAGAA+AGG | - | chr7_1:40002151-40002170 | None:intergenic | 30.0% | |
!! | GAAGGCATCAATGTTAAAAT+TGG | - | chr7_1:40002159-40002178 | None:intergenic | 30.0% |
!!! | AAGAAAAAGTAGTTTTGGTG+GGG | - | chr7_1:40002181-40002200 | None:intergenic | 30.0% |
ATAGACCTTTCATTCAAAGA+TGG | + | chr7_1:40002550-40002569 | Msa1018980:CDS | 30.0% | |
ATTCAAAGATGGTTTAATGC+TGG | + | chr7_1:40002561-40002580 | Msa1018980:CDS | 30.0% | |
ATTAGTTACATTAGCGATGA+AGG | + | chr7_1:40002705-40002724 | Msa1018980:CDS | 30.0% | |
!! | CAAAAAAGTACTCGAAAACA+AGG | - | chr7_1:40002843-40002862 | None:intergenic | 30.0% |
ATACTATCTCCTTCACAAAT+TGG | - | chr7_1:40002900-40002919 | None:intergenic | 30.0% | |
TTTATGATAGATCCAAGTTG+AGG | + | chr7_1:40003462-40003481 | Msa1018980:CDS | 30.0% | |
! | TTATGATAGATCCAAGTTGA+GGG | + | chr7_1:40003463-40003482 | Msa1018980:CDS | 30.0% |
ATTTCTGAACTTGCAAAAAG+TGG | + | chr7_1:40003518-40003537 | Msa1018980:CDS | 30.0% | |
GAGAAAAGAATGTACACAAT+TGG | - | chr7_1:40003727-40003746 | None:intergenic | 30.0% | |
CATAAACATGGCAAAATCAG+GGG | + | chr7_1:40000988-40001007 | Msa1018980:exon | 35.0% | |
GCTTTCTTCAACATAACTTC+TGG | - | chr7_1:40001028-40001047 | None:intergenic | 35.0% | |
GTGGACATTTGAATTCATCT+GGG | - | chr7_1:40001231-40001250 | None:intergenic | 35.0% | |
AGTGGACATTTGAATTCATC+TGG | - | chr7_1:40001232-40001251 | None:intergenic | 35.0% | |
ATTCAAATGTCCACTTTCCA+AGG | + | chr7_1:40001237-40001256 | Msa1018980:CDS | 35.0% | |
CTCATAAATTCCTTGGAAAG+TGG | - | chr7_1:40001250-40001269 | None:intergenic | 35.0% | |
AGGATCTCTCATAAATTCCT+TGG | - | chr7_1:40001257-40001276 | None:intergenic | 35.0% | |
TCAGGTTAGTGTCACAAATT+TGG | + | chr7_1:40001294-40001313 | Msa1018980:intron | 35.0% | |
! | TCTATGTTTGGTGACCATAA+AGG | + | chr7_1:40001652-40001671 | Msa1018980:intron | 35.0% |
TGTAGATGGAAAGAGAAAGT+GGG | + | chr7_1:40001987-40002006 | Msa1018980:intron | 35.0% | |
ACTCGAGTTTGAATCTTGAT+CGG | + | chr7_1:40002385-40002404 | Msa1018980:intron | 35.0% | |
ATCTTGATCGGAATAGTTCT+TGG | + | chr7_1:40002397-40002416 | Msa1018980:intron | 35.0% | |
AATAGTTCTTGGTCTGACTA+TGG | + | chr7_1:40002408-40002427 | Msa1018980:intron | 35.0% | |
CTGGTAATCCAAAGTTTGAT+CGG | - | chr7_1:40002441-40002460 | None:intergenic | 35.0% | |
GATGGTTTAATGCTGGAAAT+AGG | + | chr7_1:40002568-40002587 | Msa1018980:CDS | 35.0% | |
! | CAAATTGGCTTAAGCAATTG+AGG | - | chr7_1:40002885-40002904 | None:intergenic | 35.0% |
TTGCTTAAGCCAATTTGTGA+AGG | + | chr7_1:40002888-40002907 | Msa1018980:CDS | 35.0% | |
TCACATCTTCTTGAAGTTCA+TGG | - | chr7_1:40002926-40002945 | None:intergenic | 35.0% | |
TGACAACAACAAGAAACAAG+TGG | + | chr7_1:40002974-40002993 | Msa1018980:CDS | 35.0% | |
ATGAGGATTGGAATTACCAT+TGG | - | chr7_1:40003008-40003027 | None:intergenic | 35.0% | |
!! | TAGTGCTGATAACGTGAAAA+GGG | - | chr7_1:40003081-40003100 | None:intergenic | 35.0% |
TTATCGACCTATTGGAAGAA+GGG | + | chr7_1:40003147-40003166 | Msa1018980:CDS | 35.0% | |
AAAGCAATAGCAGTGAAAGA+CGG | + | chr7_1:40003233-40003252 | Msa1018980:CDS | 35.0% | |
! | ATCCAAGTTGAGGGAAATAA+AGG | + | chr7_1:40003472-40003491 | Msa1018980:CDS | 35.0% |
! | TTCCTTTATTTCCCTCAACT+TGG | - | chr7_1:40003477-40003496 | None:intergenic | 35.0% |
TTGCAAAAAGTGGAACTTCA+AGG | + | chr7_1:40003528-40003547 | Msa1018980:CDS | 35.0% | |
TGCAAAAAGTGGAACTTCAA+GGG | + | chr7_1:40003529-40003548 | Msa1018980:CDS | 35.0% | |
AATTCTTGAGAGACTGCATA+GGG | + | chr7_1:40003571-40003590 | Msa1018980:CDS | 35.0% | |
TATACCTTGAAAGAGAGTCT+GGG | - | chr7_1:40003637-40003656 | None:intergenic | 35.0% | |
ATATACCTTGAAAGAGAGTC+TGG | - | chr7_1:40003638-40003657 | None:intergenic | 35.0% | |
! | GTGTACCTTCAAGTTATTGA+AGG | + | chr7_1:40003667-40003686 | Msa1018980:three_prime_UTR | 35.0% |
CACATAGCTTCACTTTATTC+AGG | - | chr7_1:40003785-40003804 | None:intergenic | 35.0% | |
GAAAGCCTTAGAGTTGAAGA+AGG | + | chr7_1:40001042-40001061 | Msa1018980:CDS | 40.0% | |
CAACTCCTTCTTCAACTCTA+AGG | - | chr7_1:40001050-40001069 | None:intergenic | 40.0% | |
! | GTTTGGTGACCATAAAGGTA+TGG | + | chr7_1:40001657-40001676 | Msa1018980:intron | 40.0% |
GTGTAGATGGAAAGAGAAAG+TGG | + | chr7_1:40001986-40002005 | Msa1018980:intron | 40.0% | |
!!! | AAAAGTAGTTTTGGTGGGGA+AGG | - | chr7_1:40002177-40002196 | None:intergenic | 40.0% |
TAATCCAAAGTTTGATCGGC+AGG | - | chr7_1:40002437-40002456 | None:intergenic | 40.0% | |
ACTTAACCATCGCGTTTCTA+GGG | - | chr7_1:40002475-40002494 | None:intergenic | 40.0% | |
TACTTAACCATCGCGTTTCT+AGG | - | chr7_1:40002476-40002495 | None:intergenic | 40.0% | |
GAGAGAACTTGATGAGTTTG+AGG | - | chr7_1:40002600-40002619 | None:intergenic | 40.0% | |
ACAAGTGGCTGAAATTCCAA+TGG | + | chr7_1:40002989-40003008 | Msa1018980:CDS | 40.0% | |
GGTAATTCCAATCCTCATGA+AGG | + | chr7_1:40003010-40003029 | Msa1018980:CDS | 40.0% | |
GATGTGGAACAATCGAAACA+CGG | + | chr7_1:40003039-40003058 | Msa1018980:CDS | 40.0% | |
ATGTGGAACAATCGAAACAC+GGG | + | chr7_1:40003040-40003059 | Msa1018980:CDS | 40.0% | |
!! | CTAGTGCTGATAACGTGAAA+AGG | - | chr7_1:40003082-40003101 | None:intergenic | 40.0% |
GACTCAAACAAAGAGCTCAT+AGG | + | chr7_1:40003101-40003120 | Msa1018980:CDS | 40.0% | |
! | TAGGTCGATAAGCGGTTTTA+AGG | - | chr7_1:40003138-40003157 | None:intergenic | 40.0% |
AAAACCGCTTATCGACCTAT+TGG | + | chr7_1:40003139-40003158 | Msa1018980:CDS | 40.0% | |
TCTTCCAATAGGTCGATAAG+CGG | - | chr7_1:40003146-40003165 | None:intergenic | 40.0% | |
CTTATCGACCTATTGGAAGA+AGG | + | chr7_1:40003146-40003165 | Msa1018980:CDS | 40.0% | |
GCAACATCCTTCATAGCTAA+GGG | - | chr7_1:40003176-40003195 | None:intergenic | 40.0% | |
AGCAACATCCTTCATAGCTA+AGG | - | chr7_1:40003177-40003196 | None:intergenic | 40.0% | |
CTTCTGATGAGTCGAAAGTA+GGG | - | chr7_1:40003327-40003346 | None:intergenic | 40.0% | |
CGCATAATGCTTAGCAAACA+AGG | - | chr7_1:40003383-40003402 | None:intergenic | 40.0% | |
GTTGAGGGAAATAAAGGAAG+AGG | + | chr7_1:40003478-40003497 | Msa1018980:CDS | 40.0% | |
GAATTCTTGAGAGACTGCAT+AGG | + | chr7_1:40003570-40003589 | Msa1018980:CDS | 40.0% | |
CTCTCTCTCTCTCTCTACTT+AGG | - | chr7_1:40000829-40000848 | None:intergenic | 45.0% | |
! | GATCCTGTCATTGTTGCTTC+TGG | + | chr7_1:40001271-40001290 | Msa1018980:CDS | 45.0% |
TGACCAGAAGCAACAATGAC+AGG | - | chr7_1:40001277-40001296 | None:intergenic | 45.0% | |
! | TGTCATTGTTGCTTCTGGTC+AGG | + | chr7_1:40001276-40001295 | Msa1018980:CDS | 45.0% |
GTTACCTGCCGATCAAACTT+TGG | + | chr7_1:40002430-40002449 | Msa1018980:intron | 45.0% | |
! | TCGCGTTTCTAGGGGAAAAT+GGG | - | chr7_1:40002466-40002485 | None:intergenic | 45.0% |
! | ATCGCGTTTCTAGGGGAAAA+TGG | - | chr7_1:40002467-40002486 | None:intergenic | 45.0% |
! | ATTTTCCCCTAGAAACGCGA+TGG | + | chr7_1:40002466-40002485 | Msa1018980:intron | 45.0% |
! | CTTAACCATCGCGTTTCTAG+GGG | - | chr7_1:40002474-40002493 | None:intergenic | 45.0% |
CTCAATGCCTTCATGAGGAT+TGG | - | chr7_1:40003020-40003039 | None:intergenic | 45.0% | |
CACATCTCAATGCCTTCATG+AGG | - | chr7_1:40003025-40003044 | None:intergenic | 45.0% | |
!! | CTCATGAAGGCATTGAGATG+TGG | + | chr7_1:40003023-40003042 | Msa1018980:CDS | 45.0% |
!!! | GATAAGCGGTTTTAAGGCGT+TGG | - | chr7_1:40003132-40003151 | None:intergenic | 45.0% |
AGGGATTCCCTTCTTCCAAT+AGG | - | chr7_1:40003157-40003176 | None:intergenic | 45.0% | |
AGGGAATCCCTTAGCTATGA+AGG | + | chr7_1:40003166-40003185 | Msa1018980:CDS | 45.0% | |
AATAGCAGTGAAAGACGGTG+CGG | + | chr7_1:40003238-40003257 | Msa1018980:CDS | 45.0% | |
CCTTCTGATGAGTCGAAAGT+AGG | - | chr7_1:40003328-40003347 | None:intergenic | 45.0% | |
CCTACTTTCGACTCATCAGA+AGG | + | chr7_1:40003325-40003344 | Msa1018980:CDS | 45.0% | |
TCAGAAGGCTGTCCTTGAAA+TGG | + | chr7_1:40003340-40003359 | Msa1018980:CDS | 45.0% | |
AGGGCTAAGAGAAAAGCTAG+TGG | + | chr7_1:40003548-40003567 | Msa1018980:CDS | 45.0% | |
! | GAAAGAGAGTCTGGGATTCA+AGG | - | chr7_1:40003629-40003648 | None:intergenic | 45.0% |
GAATCCCAGACTCTCTTTCA+AGG | + | chr7_1:40003630-40003649 | Msa1018980:three_prime_UTR | 45.0% | |
!! | AAATTAAATTTCATTAAAAT+TGG | + | chr7_1:40001405-40001424 | Msa1018980:intron | 5.0% |
AGACACTCCTGAGTGAGTAG+TGG | + | chr7_1:40002044-40002063 | Msa1018980:intron | 50.0% | |
ATCACCACCACTACTCACTC+AGG | - | chr7_1:40002054-40002073 | None:intergenic | 50.0% | |
! | TTCTAGGGGAAAATGGGCTC+TGG | - | chr7_1:40002460-40002479 | None:intergenic | 50.0% |
GAAAAGGGTTGCTGCAGCAT+TGG | - | chr7_1:40003066-40003085 | None:intergenic | 50.0% | |
CGGTGCGGTTAGAGTGATTA+TGG | + | chr7_1:40003253-40003272 | Msa1018980:CDS | 50.0% | |
GTGATTCGTCGACGTGAACT+CGG | - | chr7_1:40003292-40003311 | None:intergenic | 50.0% | |
GATGAGTCGAAAGTAGGGCA+AGG | - | chr7_1:40003322-40003341 | None:intergenic | 50.0% | |
GTCCTTGAAATGGCAGAGCT+TGG | + | chr7_1:40003350-40003369 | Msa1018980:CDS | 50.0% | |
! | CTCCAAGCTCTGCCATTTCA+AGG | - | chr7_1:40003355-40003374 | None:intergenic | 50.0% |
GAGCTCGTGTGAACGCAATA+AGG | + | chr7_1:40003406-40003425 | Msa1018980:CDS | 50.0% | |
CACTCCTGAGTGAGTAGTGG+TGG | + | chr7_1:40002047-40002066 | Msa1018980:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_1 | gene | 40000737 | 40003870 | 40000737 | ID=Msa1018980;Name=Msa1018980 |
chr7_1 | mRNA | 40000737 | 40003870 | 40000737 | ID=Msa1018980-mRNA-1;Parent=Msa1018980;Name=Msa1018980-mRNA-1;_AED=0.00;_eAED=0.00;_QI=258|1|1|1|1|1|2|251|459 |
chr7_1 | exon | 40000737 | 40001297 | 40000737 | ID=Msa1018980-mRNA-1:exon:7737;Parent=Msa1018980-mRNA-1 |
chr7_1 | exon | 40002543 | 40003870 | 40002543 | ID=Msa1018980-mRNA-1:exon:7738;Parent=Msa1018980-mRNA-1 |
chr7_1 | five_prime_UTR | 40000737 | 40000994 | 40000737 | ID=Msa1018980-mRNA-1:five_prime_utr;Parent=Msa1018980-mRNA-1 |
chr7_1 | CDS | 40000995 | 40001297 | 40000995 | ID=Msa1018980-mRNA-1:cds;Parent=Msa1018980-mRNA-1 |
chr7_1 | CDS | 40002543 | 40003619 | 40002543 | ID=Msa1018980-mRNA-1:cds;Parent=Msa1018980-mRNA-1 |
chr7_1 | three_prime_UTR | 40003620 | 40003870 | 40003620 | ID=Msa1018980-mRNA-1:three_prime_utr;Parent=Msa1018980-mRNA-1 |
Gene Sequence |
Protein sequence |