Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460130 | XP_003600584.1 | 60.511 | 352 | 89 | 4 | 1 | 328 | 1 | 326 | 7.82e-117 | 350 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460130 | G7J778 | 60.511 | 352 | 89 | 4 | 1 | 328 | 1 | 326 | 3.73e-117 | 350 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006110 | Msa0460130 | 0.800915 | 1.151763e-48 | -8.615850e-47 |
| Msa0014710 | Msa0460130 | 0.804009 | 2.652920e-49 | -8.615850e-47 |
| Msa0020930 | Msa0460130 | 0.801414 | 9.105913e-49 | -8.615850e-47 |
| Msa0036140 | Msa0460130 | 0.813290 | 2.758039e-51 | -8.615850e-47 |
| Msa0037570 | Msa0460130 | -0.805624 | 1.220200e-49 | -8.615850e-47 |
| Msa0042550 | Msa0460130 | 0.831432 | 1.675309e-55 | -8.615850e-47 |
| Msa0044260 | Msa0460130 | 0.817019 | 4.096692e-52 | -8.615850e-47 |
| Msa0044330 | Msa0460130 | 0.836810 | 7.523479e-57 | -8.615850e-47 |
| Msa0045790 | Msa0460130 | 0.805034 | 1.621618e-49 | -8.615850e-47 |
| Msa0046160 | Msa0460130 | 0.806239 | 9.061144e-50 | -8.615850e-47 |
| Msa0075880 | Msa0460130 | 0.807012 | 6.222366e-50 | -8.615850e-47 |
| Msa0079180 | Msa0460130 | 0.802615 | 5.158960e-49 | -8.615850e-47 |
| Msa0092410 | Msa0460130 | 0.802777 | 4.775616e-49 | -8.615850e-47 |
| Msa0096030 | Msa0460130 | 0.805061 | 1.601088e-49 | -8.615850e-47 |
| Msa0114060 | Msa0460130 | 0.822187 | 2.708189e-53 | -8.615850e-47 |
| Msa0129190 | Msa0460130 | -0.808985 | 2.366448e-50 | -8.615850e-47 |
| Msa0138020 | Msa0460130 | 0.831523 | 1.590743e-55 | -8.615850e-47 |
| Msa0140100 | Msa0460130 | 0.830764 | 2.443784e-55 | -8.615850e-47 |
| Msa0178510 | Msa0460130 | 0.836617 | 8.425836e-57 | -8.615850e-47 |
| Msa0186950 | Msa0460130 | 0.818013 | 2.446167e-52 | -8.615850e-47 |
| Msa0190530 | Msa0460130 | 0.800573 | 1.352527e-48 | -8.615850e-47 |
| Msa0197660 | Msa0460130 | 0.819449 | 1.154793e-52 | -8.615850e-47 |
| Msa0202480 | Msa0460130 | 0.808077 | 3.697082e-50 | -8.615850e-47 |
| Msa0206010 | Msa0460130 | 0.803456 | 3.456053e-49 | -8.615850e-47 |
| Msa0217680 | Msa0460130 | 0.811644 | 6.315248e-51 | -8.615850e-47 |
| Msa0217700 | Msa0460130 | 0.808328 | 3.268777e-50 | -8.615850e-47 |
| Msa0225220 | Msa0460130 | 0.805630 | 1.216491e-49 | -8.615850e-47 |
| Msa0231060 | Msa0460130 | 0.828100 | 1.084536e-54 | -8.615850e-47 |
| Msa0383800 | Msa0460130 | 0.803108 | 4.080332e-49 | -8.615850e-47 |
| Msa0415420 | Msa0460130 | 0.818637 | 1.766594e-52 | -8.615850e-47 |
| Msa0417330 | Msa0460130 | 0.829379 | 5.320260e-55 | -8.615850e-47 |
| Msa0434180 | Msa0460130 | 0.822243 | 2.629703e-53 | -8.615850e-47 |
| Msa0452710 | Msa0460130 | 0.810320 | 1.222229e-50 | -8.615850e-47 |
| Msa0460110 | Msa0460130 | 0.819926 | 8.985461e-53 | -8.615850e-47 |
| Msa0460130 | Msa0464100 | 0.809217 | 2.110815e-50 | -8.615850e-47 |
| Msa0460130 | Msa0464120 | 0.803265 | 3.786544e-49 | -8.615850e-47 |
| Msa0460130 | Msa0468320 | 0.825711 | 4.039137e-54 | -8.615850e-47 |
| Msa0460130 | Msa0471900 | 0.803963 | 2.713027e-49 | -8.615850e-47 |
| Msa0460130 | Msa0484780 | 0.819559 | 1.089956e-52 | -8.615850e-47 |
| Msa0460130 | Msa0518380 | 0.826260 | 2.990853e-54 | -8.615850e-47 |
| Msa0460130 | Msa0518440 | 0.807206 | 5.660249e-50 | -8.615850e-47 |
| Msa0460130 | Msa0526070 | -0.804267 | 2.344494e-49 | -8.615850e-47 |
| Msa0460130 | Msa0532540 | 0.815690 | 8.123835e-52 | -8.615850e-47 |
| Msa0460130 | Msa0532930 | 0.812379 | 4.366775e-51 | -8.615850e-47 |
| Msa0460130 | Msa0532980 | 0.813421 | 2.581180e-51 | -8.615850e-47 |
| Msa0460130 | Msa0558690 | 0.801097 | 1.057391e-48 | -8.615850e-47 |
| Msa0460130 | Msa0562440 | 0.823191 | 1.581631e-53 | -8.615850e-47 |
| Msa0460130 | Msa0585230 | 0.805140 | 1.541026e-49 | -8.615850e-47 |
| Msa0460130 | Msa0589390 | 0.810734 | 9.945551e-51 | -8.615850e-47 |
| Msa0460130 | Msa0598160 | 0.815645 | 8.315042e-52 | -8.615850e-47 |
| Msa0460130 | Msa0613460 | 0.812652 | 3.806531e-51 | -8.615850e-47 |
| Msa0460130 | Msa0615220 | 0.818248 | 2.163758e-52 | -8.615850e-47 |
| Msa0460130 | Msa0620620 | 0.809872 | 1.526777e-50 | -8.615850e-47 |
| Msa0460130 | Msa0620960 | 0.822676 | 2.084919e-53 | -8.615850e-47 |
| Msa0460130 | Msa0629650 | 0.809343 | 1.983534e-50 | -8.615850e-47 |
| Msa0460130 | Msa0636020 | 0.809120 | 2.214290e-50 | -8.615850e-47 |
| Msa0460130 | Msa0637900 | 0.820483 | 6.697342e-53 | -8.615850e-47 |
| Msa0460130 | Msa0654010 | 0.823827 | 1.123304e-53 | -8.615850e-47 |
| Msa0460130 | Msa0688390 | 0.818742 | 1.672137e-52 | -8.615850e-47 |
| Msa0460130 | Msa0693380 | 0.814349 | 1.612094e-51 | -8.615850e-47 |
| Msa0460130 | Msa0705190 | 0.824852 | 6.446318e-54 | -8.615850e-47 |
| Msa0460130 | Msa0711100 | 0.805178 | 1.513201e-49 | -8.615850e-47 |
| Msa0460130 | Msa0711150 | 0.809829 | 1.559569e-50 | -8.615850e-47 |
| Msa0460130 | Msa0711450 | 0.814996 | 1.159028e-51 | -8.615850e-47 |
| Msa0460130 | Msa0715410 | 0.814683 | 1.359628e-51 | -8.615850e-47 |
| Msa0460130 | Msa0717890 | 0.801253 | 9.825119e-49 | -8.615850e-47 |
| Msa0460130 | Msa0731940 | 0.819891 | 9.153021e-53 | -8.615850e-47 |
| Msa0460130 | Msa0744040 | 0.811503 | 6.775810e-51 | -8.615850e-47 |
| Msa0460130 | Msa0749440 | 0.807049 | 6.111868e-50 | -8.615850e-47 |
| Msa0460130 | Msa0750850 | 0.800098 | 1.690322e-48 | -8.615850e-47 |
| Msa0460130 | Msa0751850 | 0.811827 | 5.763014e-51 | -8.615850e-47 |
| Msa0460130 | Msa0790440 | -0.800115 | 1.676423e-48 | -8.615850e-47 |
| Msa0460130 | Msa0817460 | 0.806160 | 9.412711e-50 | -8.615850e-47 |
| Msa0460130 | Msa0826760 | 0.819173 | 1.334549e-52 | -8.615850e-47 |
| Msa0460130 | Msa0831850 | 0.827372 | 1.622202e-54 | -8.615850e-47 |
| Msa0460130 | Msa0832150 | 0.823624 | 1.252775e-53 | -8.615850e-47 |
| Msa0460130 | Msa0833460 | 0.812469 | 4.173749e-51 | -8.615850e-47 |
| Msa0460130 | Msa0835800 | 0.802730 | 4.882593e-49 | -8.615850e-47 |
| Msa0460130 | Msa0844110 | 0.820137 | 8.041112e-53 | -8.615850e-47 |
| Msa0460130 | Msa0847880 | 0.806462 | 8.129849e-50 | -8.615850e-47 |
| Msa0460130 | Msa0858130 | 0.800701 | 1.273736e-48 | -8.615850e-47 |
| Msa0460130 | Msa0902830 | 0.815329 | 9.777546e-52 | -8.615850e-47 |
| Msa0460130 | Msa0960740 | 0.823055 | 1.701432e-53 | -8.615850e-47 |
| Msa0460130 | Msa0974630 | 0.803921 | 2.767318e-49 | -8.615850e-47 |
| Msa0460130 | Msa1001390 | 0.812431 | 4.255097e-51 | -8.615850e-47 |
| Msa0460130 | Msa1002850 | 0.818586 | 1.814308e-52 | -8.615850e-47 |
| Msa0460130 | Msa1014540 | 0.806770 | 7.001736e-50 | -8.615850e-47 |
| Msa0460130 | Msa1025080 | 0.801720 | 7.883016e-49 | -8.615850e-47 |
| Msa0460130 | Msa1026940 | 0.834219 | 3.402078e-56 | -8.615850e-47 |
| Msa0460130 | Msa1036610 | 0.803474 | 3.427026e-49 | -8.615850e-47 |
| Msa0460130 | Msa1039710 | -0.812561 | 3.984972e-51 | -8.615850e-47 |
| Msa0460130 | Msa1052330 | 0.809038 | 2.305421e-50 | -8.615850e-47 |
| Msa0460130 | Msa1064250 | 0.815014 | 1.148632e-51 | -8.615850e-47 |
| Msa0460130 | Msa1076960 | 0.815791 | 7.715095e-52 | -8.615850e-47 |
| Msa0460130 | Msa1082500 | 0.830128 | 3.496097e-55 | -8.615850e-47 |
| Msa0460130 | Msa1087980 | 0.803148 | 4.002741e-49 | -8.615850e-47 |
| Msa0460130 | Msa1095650 | 0.809619 | 1.730236e-50 | -8.615850e-47 |
| Msa0460130 | Msa1098420 | 0.800983 | 1.115473e-48 | -8.615850e-47 |
| Msa0460130 | Msa1104560 | 0.804246 | 2.368689e-49 | -8.615850e-47 |
| Msa0460130 | Msa1107190 | 0.805252 | 1.460350e-49 | -8.615850e-47 |
| Msa0460130 | Msa1109090 | 0.801486 | 8.802621e-49 | -8.615850e-47 |
| Msa0460130 | Msa1111870 | 0.824103 | 9.674523e-54 | -8.615850e-47 |
| Msa0460130 | Msa1115280 | 0.809137 | 2.194835e-50 | -8.615850e-47 |
| Msa0460130 | Msa1122860 | 0.801474 | 8.853531e-49 | -8.615850e-47 |
| Msa0460130 | Msa1142670 | 0.811605 | 6.439788e-51 | -8.615850e-47 |
| Msa0460130 | Msa1154280 | 0.813902 | 2.023116e-51 | -8.615850e-47 |
| Msa0460130 | Msa1181330 | 0.800340 | 1.509070e-48 | -8.615850e-47 |
| Msa0460130 | Msa1206850 | 0.812831 | 3.478845e-51 | -8.615850e-47 |
| Msa0460130 | Msa1207310 | 0.820639 | 6.166491e-53 | -8.615850e-47 |
| Msa0460130 | Msa1246360 | 0.801907 | 7.215834e-49 | -8.615850e-47 |
| Msa0460130 | Msa1257130 | 0.810027 | 1.413907e-50 | -8.615850e-47 |
| Msa0460130 | Msa1287460 | 0.804333 | 2.271715e-49 | -8.615850e-47 |
| Msa0460130 | Msa1306560 | 0.814728 | 1.329170e-51 | -8.615850e-47 |
| Msa0460130 | Msa1310440 | 0.803779 | 2.962655e-49 | -8.615850e-47 |
| Msa0460130 | Msa1331320 | 0.811732 | 6.042416e-51 | -8.615850e-47 |
| Msa0460130 | Msa1355890 | 0.819896 | 9.129015e-53 | -8.615850e-47 |
| Msa0460130 | Msa1368430 | 0.815186 | 1.051854e-51 | -8.615850e-47 |
| Msa0460130 | Msa1371940 | 0.808677 | 2.753139e-50 | -8.615850e-47 |
| Msa0460130 | Msa1372150 | 0.830210 | 3.338883e-55 | -8.615850e-47 |
| Msa0460130 | Msa1375380 | 0.807409 | 5.126846e-50 | -8.615850e-47 |
| Msa0460130 | Msa1382790 | 0.822381 | 2.441492e-53 | -8.615850e-47 |
| Msa0460130 | Msa1383230 | 0.816797 | 4.596017e-52 | -8.615850e-47 |
| Msa0460130 | Msa1394380 | 0.812800 | 3.533675e-51 | -8.615850e-47 |
| Msa0460130 | Msa1412130 | 0.805140 | 1.541208e-49 | -8.615850e-47 |
| Msa0460130 | Msa1419960 | 0.803094 | 4.107570e-49 | -8.615850e-47 |
| Msa0460130 | Msa1425260 | 0.802198 | 6.287211e-49 | -8.615850e-47 |
| Msa0460130 | Msa1427230 | 0.805639 | 1.211094e-49 | -8.615850e-47 |
| Msa0460130 | Msa1436480 | 0.805091 | 1.577939e-49 | -8.615850e-47 |
| Msa0460130 | Msa1450760 | 0.801352 | 9.378623e-49 | -8.615850e-47 |
| Msa0460130 | Msa1460050 | 0.802563 | 5.287049e-49 | -8.615850e-47 |
| Msa0460130 | Msa1462360 | 0.800409 | 1.461009e-48 | -8.615850e-47 |
| Msa0460130 | Msa1463900 | 0.800619 | 1.323671e-48 | -8.615850e-47 |
| Msa0239800 | Msa0460130 | 0.821142 | 4.724986e-53 | -8.615850e-47 |
| Msa0241140 | Msa0460130 | 0.834231 | 3.377426e-56 | -8.615850e-47 |
| Msa0257500 | Msa0460130 | 0.828618 | 8.133015e-55 | -8.615850e-47 |
| Msa0258590 | Msa0460130 | 0.820710 | 5.940510e-53 | -8.615850e-47 |
| Msa0277820 | Msa0460130 | 0.800560 | 1.360741e-48 | -8.615850e-47 |
| Msa0308460 | Msa0460130 | 0.814579 | 1.433817e-51 | -8.615850e-47 |
| Msa0317510 | Msa0460130 | 0.809442 | 1.888054e-50 | -8.615850e-47 |
| Msa0321080 | Msa0460130 | 0.808360 | 3.218028e-50 | -8.615850e-47 |
| Msa0326110 | Msa0460130 | 0.803239 | 3.832292e-49 | -8.615850e-47 |
| Msa0326520 | Msa0460130 | 0.809016 | 2.330585e-50 | -8.615850e-47 |
| Msa0330340 | Msa0460130 | 0.808684 | 2.744621e-50 | -8.615850e-47 |
| Msa0342010 | Msa0460130 | 0.807980 | 3.878194e-50 | -8.615850e-47 |
| Msa0358890 | Msa0460130 | 0.800626 | 1.319250e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460130 | MtrunA17_Chr3g0109341 | 60.511 | 352 | 89 | 4 | 1 | 328 | 1 | 326 | 7.19e-121 | 350 |
| Msa0460130 | MtrunA17_Chr3g0109331 | 54.213 | 356 | 106 | 8 | 1 | 326 | 1 | 329 | 1.08e-101 | 302 |
| Msa0460130 | MtrunA17_Chr7g0273841 | 40.896 | 335 | 129 | 7 | 15 | 321 | 94 | 387 | 6.54e-58 | 191 |
| Msa0460130 | MtrunA17_Chr8g0361041 | 43.448 | 145 | 47 | 4 | 113 | 257 | 6 | 115 | 2.63e-23 | 92.8 |
| Msa0460130 | MtrunA17_Chr8g0349401 | 59.155 | 71 | 28 | 1 | 251 | 321 | 6 | 75 | 4.64e-18 | 77.4 |
| Msa0460130 | MtrunA17_Chr8g0361031 | 53.165 | 79 | 24 | 1 | 256 | 321 | 18 | 96 | 1.11e-16 | 74.3 |
| Msa0460130 | MtrunA17_Chr8g0349411 | 45.794 | 107 | 32 | 2 | 107 | 213 | 246 | 326 | 1.58e-15 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0460130 | AT1G54520.1 | 36.207 | 348 | 148 | 10 | 5 | 321 | 84 | 388 | 6.16e-47 | 163 |
Find 77 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTGCAGGTGGATCTTAAA+AGG | 0.274049 | 3_3:+57150992 | Msa0460130:intron |
| TTCAGGCTGGTGAGGTACTA+TGG | 0.302452 | 3_3:+57153009 | Msa0460130:intron |
| AACCTAGTTTCAGCCTCTTC+AGG | 0.304989 | 3_3:+57148781 | Msa0460130:CDS |
| GTTGTCTAAGGTTGGAATCT+TGG | 0.323997 | 3_3:+57149197 | Msa0460130:intron |
| TTCTTCTTGGTACTCATACT+TGG | 0.329332 | 3_3:+57148964 | Msa0460130:CDS |
| AGTTACTGTGCTCAAGATTC+AGG | 0.329555 | 3_3:+57149032 | Msa0460130:CDS |
| GAAGGGAGCTGAATATTTAA+AGG | 0.344002 | 3_3:+57152839 | Msa0460130:CDS |
| TATTCAGCTCCCTTCATGTT+AGG | 0.362444 | 3_3:-57152831 | None:intergenic |
| GCCTCTTCAGGAGGTGTAAT+GGG | 0.372188 | 3_3:+57148793 | Msa0460130:CDS |
| CCCTTTCTTCAATTGATAGT+TGG | 0.380058 | 3_3:-57151044 | None:intergenic |
| CTTATGTTAGGTAACAATAT+TGG | 0.384674 | 3_3:+57152782 | Msa0460130:intron |
| AGCATGTTTCTCCACCCTCC+TGG | 0.401006 | 3_3:-57151017 | None:intergenic |
| AATTCGTCTTGTGTTCAGTT+TGG | 0.403648 | 3_3:+57150734 | Msa0460130:CDS |
| TAAACAGCTCACACCTTCCT+TGG | 0.423872 | 3_3:-57149283 | None:intergenic |
| GGGTTTCATCCTCTCTCTGT+GGG | 0.434025 | 3_3:-57153034 | None:intergenic |
| TTTAAATTGCAAAACAGTAA+TGG | 0.440265 | 3_3:+57153279 | Msa0460130:intron |
| AACTGAACACAAGACGAATT+CGG | 0.442390 | 3_3:-57150731 | None:intergenic |
| AGCCTCTTCAGGAGGTGTAA+TGG | 0.443156 | 3_3:+57148792 | Msa0460130:CDS |
| ATCTCCCTAGCTTGTGTGAT+GGG | 0.449495 | 3_3:+57150688 | Msa0460130:CDS |
| ATTCAAGTTCTCGACATGTA+AGG | 0.455985 | 3_3:+57148869 | Msa0460130:CDS |
| ACCAACTATCAATTGAAGAA+AGG | 0.462903 | 3_3:+57151043 | Msa0460130:CDS |
| TGTGGATGAGGAAGAGGATG+AGG | 0.468064 | 3_3:-57148842 | None:intergenic |
| GTATTAAATTTACTTACAAT+CGG | 0.471244 | 3_3:-57150771 | None:intergenic |
| CCAACTATCAATTGAAGAAA+GGG | 0.475889 | 3_3:+57151044 | Msa0460130:CDS |
| TCTAAGGTTGGAATCTTGGA+TGG | 0.480043 | 3_3:+57149201 | Msa0460130:intron |
| ATGAAATATGAATAAACAAG+TGG | 0.483886 | 3_3:+57153104 | Msa0460130:exon |
| CAATACAAAGGGATCTAACT+AGG | 0.489233 | 3_3:+57149235 | Msa0460130:CDS |
| AAGAGGCTGAAACTAGGTTA+AGG | 0.489901 | 3_3:-57148777 | None:intergenic |
| CATCATCGTTACTGTATAGC+AGG | 0.490864 | 3_3:+57150870 | Msa0460130:CDS |
| ACACAAGACGAATTCGGAAT+CGG | 0.514544 | 3_3:-57150725 | None:intergenic |
| GTTGGAATCTTGGATGGGAT+GGG | 0.516919 | 3_3:+57149207 | Msa0460130:CDS |
| GGTTGGAATCTTGGATGGGA+TGG | 0.518371 | 3_3:+57149206 | Msa0460130:intron |
| CATGTAAGGGCACAACATCA+TGG | 0.525179 | 3_3:+57148883 | Msa0460130:CDS |
| CTCCTGAAGAGGCTGAAACT+AGG | 0.528000 | 3_3:-57148783 | None:intergenic |
| TCTTTGTATAAAATAGCAGT+TGG | 0.530710 | 3_3:+57153181 | Msa0460130:three_prime_UTR |
| ACAATATTGGTAGCTACTAA+AGG | 0.530785 | 3_3:+57152795 | Msa0460130:CDS |
| ACTTGAATACATTGTGGATG+AGG | 0.531177 | 3_3:-57148854 | None:intergenic |
| TTCATAGACTTAGCTAGCTG+AGG | 0.537869 | 3_3:-57153086 | None:intergenic |
| ACAGCTCACACCTTCCTTGG+AGG | 0.537908 | 3_3:-57149280 | None:intergenic |
| GAGGATGAAACCCTTTCAGA+TGG | 0.539392 | 3_3:+57153044 | Msa0460130:CDS |
| TTTGCACTGAGCTGCGGACA+AGG | 0.544166 | 3_3:+57153313 | Msa0460130:three_prime_UTR |
| TTGTTCTTTGCACTGAGCTG+CGG | 0.547007 | 3_3:+57153307 | Msa0460130:three_prime_UTR |
| GAAATTCTTTCAGGCTGGTG+AGG | 0.547725 | 3_3:+57153001 | Msa0460130:intron |
| ATTGACCCATCACACAAGCT+AGG | 0.555584 | 3_3:-57150693 | None:intergenic |
| GGTGGATCTTAAAAGGAGCC+AGG | 0.555856 | 3_3:+57150999 | Msa0460130:intron |
| TTCAAGTTCTCGACATGTAA+GGG | 0.557519 | 3_3:+57148870 | Msa0460130:CDS |
| TCCCATTACACCTCCTGAAG+AGG | 0.558934 | 3_3:-57148794 | None:intergenic |
| TCATAGACTTAGCTAGCTGA+GGG | 0.559467 | 3_3:-57153085 | None:intergenic |
| AATTGCAAAACAGTAATGGA+AGG | 0.563040 | 3_3:+57153283 | Msa0460130:intron |
| GATGGGATGCACAATACAAA+GGG | 0.566038 | 3_3:+57149224 | Msa0460130:CDS |
| TATCTCCCTAGCTTGTGTGA+TGG | 0.569554 | 3_3:+57150687 | Msa0460130:CDS |
| AGGGTTTCATCCTCTCTCTG+TGG | 0.571271 | 3_3:-57153035 | None:intergenic |
| GAATGATACCGCTGATGGTA+AGG | 0.572960 | 3_3:+57148906 | Msa0460130:CDS |
| ATACATTGTGGATGAGGAAG+AGG | 0.573210 | 3_3:-57148848 | None:intergenic |
| ACATAAGCTACCTAACATGA+AGG | 0.574557 | 3_3:+57152821 | Msa0460130:CDS |
| GGATGGGATGCACAATACAA+AGG | 0.581338 | 3_3:+57149223 | Msa0460130:CDS |
| ATGTAAGGGCACAACATCAT+GGG | 0.583859 | 3_3:+57148884 | Msa0460130:CDS |
| TGAAATATGAATAAACAAGT+GGG | 0.593094 | 3_3:+57153105 | Msa0460130:exon |
| CTAGTTTCAGCCTCTTCAGG+AGG | 0.598312 | 3_3:+57148784 | Msa0460130:CDS |
| GATCTTAAAAGGAGCCAGGA+GGG | 0.605501 | 3_3:+57151003 | Msa0460130:CDS |
| ACTATGGACCCCACAGAGAG+AGG | 0.608037 | 3_3:+57153025 | Msa0460130:CDS |
| CTAAGGTTGGAATCTTGGAT+GGG | 0.608059 | 3_3:+57149202 | Msa0460130:intron |
| CATGGGAATGATACCGCTGA+TGG | 0.609816 | 3_3:+57148901 | Msa0460130:CDS |
| GCTAATACATCCTCCAAGGA+AGG | 0.613204 | 3_3:+57149270 | Msa0460130:CDS |
| TTGACCCATCACACAAGCTA+GGG | 0.613413 | 3_3:-57150692 | None:intergenic |
| CAAGTGATGAAATTGAAACA+TGG | 0.617803 | 3_3:+57148932 | Msa0460130:CDS |
| ATAAACAAGTGGGTGATGCT+TGG | 0.618412 | 3_3:+57153115 | Msa0460130:exon |
| CTTAAAAGGAGCCAGGAGGG+TGG | 0.619800 | 3_3:+57151006 | Msa0460130:CDS |
| AGCTGCTAATACATCCTCCA+AGG | 0.623603 | 3_3:+57149266 | Msa0460130:CDS |
| TTGTGGACCTCAATTTCACA+AGG | 0.639438 | 3_3:-57153245 | None:intergenic |
| GGTTTCATCCTCTCTCTGTG+GGG | 0.650477 | 3_3:-57153033 | None:intergenic |
| CATAAGCTACCTAACATGAA+GGG | 0.659099 | 3_3:+57152822 | Msa0460130:CDS |
| GTTCGACAACAAGTACATAG+TGG | 0.662502 | 3_3:+57151758 | Msa0460130:CDS |
| TCTTCAGGAGGTGTAATGGG+AGG | 0.679703 | 3_3:+57148796 | Msa0460130:CDS |
| ACTTGCAACCTTACCATCAG+CGG | 0.690100 | 3_3:-57148914 | None:intergenic |
| TCGAGAACTTGAATACATTG+TGG | 0.690522 | 3_3:-57148860 | None:intergenic |
| GGATCTTAAAAGGAGCCAGG+AGG | 0.690908 | 3_3:+57151002 | Msa0460130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTATAAAAGCAATTAA+AGG | + | chr3_3:57151186-57151205 | Msa0460130:intron | 10.0% |
| !!! | ATTTTATAAAAGCAATTAAA+GGG | + | chr3_3:57151187-57151206 | Msa0460130:intron | 10.0% |
| !!! | TTTTAACTCATTAAATAATG+TGG | + | chr3_3:57149432-57149451 | Msa0460130:intron | 15.0% |
| !! | GTATTAAATTTACTTACAAT+CGG | - | chr3_3:57150774-57150793 | None:intergenic | 15.0% |
| !!! | AATTTTAAGTTTTCAACTAT+TGG | + | chr3_3:57151597-57151616 | Msa0460130:intron | 15.0% |
| !!! | TTTCTTTTTTTCAAATTTCT+CGG | - | chr3_3:57151727-57151746 | None:intergenic | 15.0% |
| !!! | TGATATAATTTACTTTTCTT+TGG | + | chr3_3:57151783-57151802 | Msa0460130:intron | 15.0% |
| !!! | GATATAATTTACTTTTCTTT+GGG | + | chr3_3:57151784-57151803 | Msa0460130:intron | 15.0% |
| !! | CTACTAAAAAACAATTAAAA+TGG | - | chr3_3:57152139-57152158 | None:intergenic | 15.0% |
| !!! | TGTCTTTTAAATGTTAAATA+TGG | - | chr3_3:57152184-57152203 | None:intergenic | 15.0% |
| !!! | TATATTTTACAACATCTTTT+TGG | + | chr3_3:57152616-57152635 | Msa0460130:intron | 15.0% |
| !!! | TTGTGTTTTTATCATTAACA+TGG | + | chr3_3:57148752-57148771 | Msa0460130:CDS | 20.0% |
| !!! | TTGTTATTGATTACATATAG+AGG | - | chr3_3:57149792-57149811 | None:intergenic | 20.0% |
| !! | ATACTATACTTTAGATGATT+TGG | + | chr3_3:57149886-57149905 | Msa0460130:intron | 20.0% |
| !!! | TTCATTTTACACCATAAAAA+AGG | - | chr3_3:57150502-57150521 | None:intergenic | 20.0% |
| !!! | ATTGATATACTTTTTGTTGT+TGG | + | chr3_3:57150811-57150830 | Msa0460130:intron | 20.0% |
| !! | TTAAAAATTAAATCATACCG+TGG | - | chr3_3:57151163-57151182 | None:intergenic | 20.0% |
| !!! | TTTGATTTGTTTTTTTGAGT+TGG | + | chr3_3:57151816-57151835 | Msa0460130:intron | 20.0% |
| !! | TATGATACCAAATATAGAAT+CGG | - | chr3_3:57151857-57151876 | None:intergenic | 20.0% |
| !! | ATTCTATATTTGGTATCATA+GGG | + | chr3_3:57151857-57151876 | Msa0460130:intron | 20.0% |
| !!! | AAATATGGTCAAAGTATTAA+AGG | - | chr3_3:57152169-57152188 | None:intergenic | 20.0% |
| !! | TTTCTGTTAATGTTGTATAT+GGG | - | chr3_3:57152359-57152378 | None:intergenic | 20.0% |
| !!! | TTTTCTGTTAATGTTGTATA+TGG | - | chr3_3:57152360-57152379 | None:intergenic | 20.0% |
| !!! | ATATTGCTTCATATTTTGTT+TGG | + | chr3_3:57152572-57152591 | Msa0460130:intron | 20.0% |
| !! | TTGATATCTTACTGTAAATT+TGG | + | chr3_3:57152728-57152747 | Msa0460130:intron | 20.0% |
| !!! | TATTTGAGATATCTTATGTT+AGG | + | chr3_3:57152770-57152789 | Msa0460130:intron | 20.0% |
| !! | ATGAAATATGAATAAACAAG+TGG | + | chr3_3:57153104-57153123 | Msa0460130:exon | 20.0% |
| !! | TGAAATATGAATAAACAAGT+GGG | + | chr3_3:57153105-57153124 | Msa0460130:exon | 20.0% |
| !!! | GATTTATTTTTGTTAATGTC+TGG | + | chr3_3:57153203-57153222 | Msa0460130:three_prime_UTR | 20.0% |
| !! | TTTAAATTGCAAAACAGTAA+TGG | + | chr3_3:57153279-57153298 | Msa0460130:intron | 20.0% |
| ! | TGTTAGTCAAGTAATTTGAA+TGG | - | chr3_3:57149590-57149609 | None:intergenic | 25.0% |
| ! | GATTTGACAAAGTTATATGT+CGG | + | chr3_3:57149651-57149670 | Msa0460130:intron | 25.0% |
| ! | AAACAGTATAGAAACTCAAA+CGG | - | chr3_3:57150250-57150269 | None:intergenic | 25.0% |
| !!! | GAGTTTCTATACTGTTTTTT+CGG | + | chr3_3:57150253-57150272 | Msa0460130:intron | 25.0% |
| ! | TGGTGTAAAATGAAAGATTT+AGG | + | chr3_3:57150508-57150527 | Msa0460130:intron | 25.0% |
| !! | GTCATTGTAAAACAGTTTTA+CGG | - | chr3_3:57151343-57151362 | None:intergenic | 25.0% |
| !! | GCATGTTTTATAGAGTTTAA+TGG | - | chr3_3:57151375-57151394 | None:intergenic | 25.0% |
| !!! | CTTCAATTTCTAGTAATATG+CGG | + | chr3_3:57151394-57151413 | Msa0460130:intron | 25.0% |
| !!! | TTCAATTTCTAGTAATATGC+GGG | + | chr3_3:57151395-57151414 | Msa0460130:intron | 25.0% |
| ! | AAAAAAAGAAACTTCGCAAT+GGG | + | chr3_3:57151736-57151755 | Msa0460130:CDS | 25.0% |
| ! | GATTCTATATTTGGTATCAT+AGG | + | chr3_3:57151856-57151875 | Msa0460130:intron | 25.0% |
| !!! | TAGTTTTGTGAAAATCATGT+TGG | + | chr3_3:57151914-57151933 | Msa0460130:intron | 25.0% |
| !! | TGATATAGTCTTGAAAACAA+TGG | - | chr3_3:57151982-57152001 | None:intergenic | 25.0% |
| ! | GAAACAAGGATAAAATACTA+TGG | - | chr3_3:57152036-57152055 | None:intergenic | 25.0% |
| ! | AACATTGCATTGTTAAAACT+TGG | - | chr3_3:57152075-57152094 | None:intergenic | 25.0% |
| !!! | TGTTTTTTAAGAAGAGAGTT+GGG | - | chr3_3:57152258-57152277 | None:intergenic | 25.0% |
| !!! | ATGTTTTTTAAGAAGAGAGT+TGG | - | chr3_3:57152259-57152278 | None:intergenic | 25.0% |
| !! | GTATATTCATTTTCTGCTAA+GGG | - | chr3_3:57152323-57152342 | None:intergenic | 25.0% |
| !! | AGTATATTCATTTTCTGCTA+AGG | - | chr3_3:57152324-57152343 | None:intergenic | 25.0% |
| !! | TAATTGGTAGTATTTATCCA+AGG | - | chr3_3:57152535-57152554 | None:intergenic | 25.0% |
| !!! | CTTCATATTTTGTTTGGATT+GGG | + | chr3_3:57152578-57152597 | Msa0460130:intron | 25.0% |
| ! | CTTATGTTAGGTAACAATAT+TGG | + | chr3_3:57152782-57152801 | Msa0460130:intron | 25.0% |
| !!! | GCTTACTAATAATTTTTTGC+TGG | - | chr3_3:57152895-57152914 | None:intergenic | 25.0% |
| ! | TATAACCTTGAAATTCTTTC+AGG | + | chr3_3:57152992-57153011 | Msa0460130:intron | 25.0% |
| ! | TCTTTGTATAAAATAGCAGT+TGG | + | chr3_3:57153181-57153200 | Msa0460130:three_prime_UTR | 25.0% |
| !! | TTTTAAACCTTGTGAAATTG+AGG | + | chr3_3:57153238-57153257 | Msa0460130:three_prime_UTR | 25.0% |
| CAAGTGATGAAATTGAAACA+TGG | + | chr3_3:57148932-57148951 | Msa0460130:CDS | 30.0% | |
| !!! | ATGGTTCTTGTTTTTCTTCT+TGG | + | chr3_3:57148951-57148970 | Msa0460130:CDS | 30.0% |
| ! | CATACCTCATTAACTGATTT+GGG | - | chr3_3:57149399-57149418 | None:intergenic | 30.0% |
| TCATACCTCATTAACTGATT+TGG | - | chr3_3:57149400-57149419 | None:intergenic | 30.0% | |
| TCCATAAGTATATGTCTGTT+GGG | + | chr3_3:57149539-57149558 | Msa0460130:intron | 30.0% | |
| TAGAGGTAAGAAATAAAGGA+AGG | + | chr3_3:57149845-57149864 | Msa0460130:intron | 30.0% | |
| AGAGGTAAGAAATAAAGGAA+GGG | + | chr3_3:57149846-57149865 | Msa0460130:intron | 30.0% | |
| ! | ATGATTTGGAAGACAAGAAA+TGG | + | chr3_3:57149900-57149919 | Msa0460130:intron | 30.0% |
| ! | TGATTTGGAAGACAAGAAAT+GGG | + | chr3_3:57149901-57149920 | Msa0460130:intron | 30.0% |
| TCCAAATGAAGGAAAAATAC+CGG | + | chr3_3:57149932-57149951 | Msa0460130:intron | 30.0% | |
| ! | TTAAACTTTTGTCATGCAGA+TGG | + | chr3_3:57149973-57149992 | Msa0460130:intron | 30.0% |
| ! | TAAACTTTTGTCATGCAGAT+GGG | + | chr3_3:57149974-57149993 | Msa0460130:intron | 30.0% |
| !!! | TTCTCTAGTTTTTTAGATGC+AGG | + | chr3_3:57150295-57150314 | Msa0460130:intron | 30.0% |
| ! | AAAGATTTAGGATTCTGATG+TGG | + | chr3_3:57150520-57150539 | Msa0460130:intron | 30.0% |
| !!! | AGCTAGTTTGTTTAGTGTTT+TGG | + | chr3_3:57150647-57150666 | Msa0460130:intron | 30.0% |
| TCAATTAAGAGAGATTGCAA+TGG | - | chr3_3:57150796-57150815 | None:intergenic | 30.0% | |
| CTATAACTCAAATTGCACTT+TGG | - | chr3_3:57150933-57150952 | None:intergenic | 30.0% | |
| ACCAACTATCAATTGAAGAA+AGG | + | chr3_3:57151043-57151062 | Msa0460130:CDS | 30.0% | |
| CCAACTATCAATTGAAGAAA+GGG | + | chr3_3:57151044-57151063 | Msa0460130:CDS | 30.0% | |
| GAAGAAAGGGAAAAATTTGA+TGG | + | chr3_3:57151057-57151076 | Msa0460130:CDS | 30.0% | |
| TATAAAAGCAATTAAAGGGC+AGG | + | chr3_3:57151191-57151210 | Msa0460130:intron | 30.0% | |
| TTCAAAATAACCATCCAGAA+GGG | - | chr3_3:57151284-57151303 | None:intergenic | 30.0% | |
| TTTCAAAATAACCATCCAGA+AGG | - | chr3_3:57151285-57151304 | None:intergenic | 30.0% | |
| !!! | GATGGTTATTTTGAAACTCA+TGG | + | chr3_3:57151289-57151308 | Msa0460130:intron | 30.0% |
| TAAAAGAGAATTGAAGGGTA+AGG | - | chr3_3:57151460-57151479 | None:intergenic | 30.0% | |
| ! | ACCCTTCAATTCTCTTTTAA+TGG | + | chr3_3:57151461-57151480 | Msa0460130:intron | 30.0% |
| GCCATTAAAAGAGAATTGAA+GGG | - | chr3_3:57151465-57151484 | None:intergenic | 30.0% | |
| AGCCATTAAAAGAGAATTGA+AGG | - | chr3_3:57151466-57151485 | None:intergenic | 30.0% | |
| GAAAAAAAGAAACTTCGCAA+TGG | + | chr3_3:57151735-57151754 | Msa0460130:CDS | 30.0% | |
| !! | TTCACTACCGATTCTATATT+TGG | + | chr3_3:57151847-57151866 | Msa0460130:intron | 30.0% |
| ! | TGGAATTTTCTATGCATGTT+TGG | - | chr3_3:57151962-57151981 | None:intergenic | 30.0% |
| GGATAAAATACTATGGTGTT+GGG | - | chr3_3:57152029-57152048 | None:intergenic | 30.0% | |
| AGGATAAAATACTATGGTGT+TGG | - | chr3_3:57152030-57152049 | None:intergenic | 30.0% | |
| ! | TATCCTTGTTTCCTCAATAA+TGG | + | chr3_3:57152044-57152063 | Msa0460130:intron | 30.0% |
| ! | GCTATTCATGCAATATTTTC+TGG | + | chr3_3:57152412-57152431 | Msa0460130:intron | 30.0% |
| TGAAGCAATATTGAACCATA+TGG | - | chr3_3:57152563-57152582 | None:intergenic | 30.0% | |
| !! | GCTTCATATTTTGTTTGGAT+TGG | + | chr3_3:57152577-57152596 | Msa0460130:intron | 30.0% |
| ! | ACAATATTGGTAGCTACTAA+AGG | + | chr3_3:57152795-57152814 | Msa0460130:CDS | 30.0% |
| !!! | TAATTTTTTGCTGGAGAGAA+GGG | - | chr3_3:57152886-57152905 | None:intergenic | 30.0% |
| !!! | ATAATTTTTTGCTGGAGAGA+AGG | - | chr3_3:57152887-57152906 | None:intergenic | 30.0% |
| ! | AAGTAGTTTTCCATCTGAAA+GGG | - | chr3_3:57153057-57153076 | None:intergenic | 30.0% |
| ! | TAAGTAGTTTTCCATCTGAA+AGG | - | chr3_3:57153058-57153077 | None:intergenic | 30.0% |
| TTTAAATGTCACTCACTTTG+TGG | - | chr3_3:57153265-57153284 | None:intergenic | 30.0% | |
| ! | AATTGCAAAACAGTAATGGA+AGG | + | chr3_3:57153283-57153302 | Msa0460130:intron | 30.0% |
| ACTTGAATACATTGTGGATG+AGG | - | chr3_3:57148857-57148876 | None:intergenic | 35.0% | |
| TCGAGAACTTGAATACATTG+TGG | - | chr3_3:57148863-57148882 | None:intergenic | 35.0% | |
| ! | ATTCAAGTTCTCGACATGTA+AGG | + | chr3_3:57148869-57148888 | Msa0460130:CDS | 35.0% |
| ! | TTCAAGTTCTCGACATGTAA+GGG | + | chr3_3:57148870-57148889 | Msa0460130:CDS | 35.0% |
| TTCTTCTTGGTACTCATACT+TGG | + | chr3_3:57148964-57148983 | Msa0460130:CDS | 35.0% | |
| CAATACAAAGGGATCTAACT+AGG | + | chr3_3:57149235-57149254 | Msa0460130:CDS | 35.0% | |
| TGTTCCCAAATCAGTTAATG+AGG | + | chr3_3:57149392-57149411 | Msa0460130:intron | 35.0% | |
| AGTTCTACACATGCATCAAA+TGG | - | chr3_3:57149465-57149484 | None:intergenic | 35.0% | |
| GTCCATAAGTATATGTCTGT+TGG | + | chr3_3:57149538-57149557 | Msa0460130:intron | 35.0% | |
| TCCCAACAGACATATACTTA+TGG | - | chr3_3:57149543-57149562 | None:intergenic | 35.0% | |
| ACTTGACTAACATACAACCA+AGG | + | chr3_3:57149598-57149617 | Msa0460130:intron | 35.0% | |
| ! | AAGTTATATGTCGGTTGTTG+AGG | + | chr3_3:57149660-57149679 | Msa0460130:intron | 35.0% |
| CACTTTGATATAGATTGTCG+AGG | + | chr3_3:57149813-57149832 | Msa0460130:intron | 35.0% | |
| TGGGTAGAGGTAAGAAATAA+AGG | + | chr3_3:57149841-57149860 | Msa0460130:intron | 35.0% | |
| GAGGTAAGAAATAAAGGAAG+GGG | + | chr3_3:57149847-57149866 | Msa0460130:intron | 35.0% | |
| AGAAATAAAGGAAGGGGATT+TGG | + | chr3_3:57149853-57149872 | Msa0460130:intron | 35.0% | |
| GGGATTGTATTTCCAAATGA+AGG | + | chr3_3:57149921-57149940 | Msa0460130:intron | 35.0% | |
| ! | TCCGGTATTTTTCCTTCATT+TGG | - | chr3_3:57149936-57149955 | None:intergenic | 35.0% |
| ATCTCATTCACTACTTCTTC+CGG | - | chr3_3:57149954-57149973 | None:intergenic | 35.0% | |
| !!! | TGTTTGCGTAGTTGTTTTTC+TGG | + | chr3_3:57150156-57150175 | Msa0460130:intron | 35.0% |
| !!! | TATACTGTTTTTTCGGATGC+AGG | + | chr3_3:57150260-57150279 | Msa0460130:intron | 35.0% |
| !!! | CTCTAGTTTTTTAGTGTAGC+AGG | + | chr3_3:57150332-57150351 | Msa0460130:intron | 35.0% |
| ! | TAGTTTGTAGGTGTGCTTTA+TGG | + | chr3_3:57150359-57150378 | Msa0460130:intron | 35.0% |
| !!! | CAGTTTCAGTTTTGGTTATG+TGG | + | chr3_3:57150434-57150453 | Msa0460130:intron | 35.0% |
| TGGTTATGTGGTAGTATCTT+CGG | + | chr3_3:57150446-57150465 | Msa0460130:intron | 35.0% | |
| AACTGAACACAAGACGAATT+CGG | - | chr3_3:57150734-57150753 | None:intergenic | 35.0% | |
| AATTCGTCTTGTGTTCAGTT+TGG | + | chr3_3:57150734-57150753 | Msa0460130:CDS | 35.0% | |
| TGTATTGTCTCTGTTAAGCA+AGG | - | chr3_3:57150837-57150856 | None:intergenic | 35.0% | |
| GTTCATTCCTTCTCCTAATT+AGG | + | chr3_3:57150907-57150926 | Msa0460130:intron | 35.0% | |
| AATTGCACTTTGGCCTAATT+AGG | - | chr3_3:57150923-57150942 | None:intergenic | 35.0% | |
| ! | ATTTGAGTTATAGCCCCTAT+AGG | + | chr3_3:57150940-57150959 | Msa0460130:intron | 35.0% |
| TAACCCCTTTAACACCTATA+GGG | - | chr3_3:57150957-57150976 | None:intergenic | 35.0% | |
| ! | CTGCAAAGTTTGTTCATCAA+GGG | - | chr3_3:57150980-57150999 | None:intergenic | 35.0% |
| ! | CCCTTTCTTCAATTGATAGT+TGG | - | chr3_3:57151047-57151066 | None:intergenic | 35.0% |
| TAAGAAGCCAGAGTTATGAT+CGG | + | chr3_3:57151121-57151140 | Msa0460130:intron | 35.0% | |
| GTTTGGCAATGAATATTCCA+CGG | + | chr3_3:57151143-57151162 | Msa0460130:intron | 35.0% | |
| TCAAAATAACCATCCAGAAG+GGG | - | chr3_3:57151283-57151302 | None:intergenic | 35.0% | |
| GATCCATTATTGAGGAAACA+AGG | - | chr3_3:57152050-57152069 | None:intergenic | 35.0% | |
| ACTTGGATGATCCATTATTG+AGG | - | chr3_3:57152058-57152077 | None:intergenic | 35.0% | |
| TAACAATGCAATGTTGCAAG+TGG | + | chr3_3:57152080-57152099 | Msa0460130:intron | 35.0% | |
| CTTAGTATCATGAGACCATT+TGG | - | chr3_3:57152217-57152236 | None:intergenic | 35.0% | |
| ATGGTCTCATGATACTAAGA+AGG | + | chr3_3:57152218-57152237 | Msa0460130:intron | 35.0% | |
| TGGTCTCATGATACTAAGAA+GGG | + | chr3_3:57152219-57152238 | Msa0460130:intron | 35.0% | |
| ! | TGAAGCATTCATATAGCGTA+TGG | + | chr3_3:57152449-57152468 | Msa0460130:intron | 35.0% |
| TAGCGTATGGTTCATTGTTA+AGG | + | chr3_3:57152462-57152481 | Msa0460130:intron | 35.0% | |
| AGCGTATGGTTCATTGTTAA+GGG | + | chr3_3:57152463-57152482 | Msa0460130:intron | 35.0% | |
| ACATTTGAAAGCAGTAGTGT+AGG | + | chr3_3:57152507-57152526 | Msa0460130:intron | 35.0% | |
| CTACCAATTAGAGAACCATA+TGG | + | chr3_3:57152545-57152564 | Msa0460130:intron | 35.0% | |
| GAACCATATGGTTCTCTAAT+TGG | - | chr3_3:57152551-57152570 | None:intergenic | 35.0% | |
| AGTCCTTGGGATATTCATAA+TGG | + | chr3_3:57152651-57152670 | Msa0460130:intron | 35.0% | |
| TAGCCATTATGAATATCCCA+AGG | - | chr3_3:57152657-57152676 | None:intergenic | 35.0% | |
| TTCTTATCACTTGTAACCTG+TGG | + | chr3_3:57152701-57152720 | Msa0460130:intron | 35.0% | |
| GTAAGATATCAAAATGCCAC+AGG | - | chr3_3:57152720-57152739 | None:intergenic | 35.0% | |
| ACATAAGCTACCTAACATGA+AGG | + | chr3_3:57152821-57152840 | Msa0460130:CDS | 35.0% | |
| CATAAGCTACCTAACATGAA+GGG | + | chr3_3:57152822-57152841 | Msa0460130:CDS | 35.0% | |
| GAAGGGAGCTGAATATTTAA+AGG | + | chr3_3:57152839-57152858 | Msa0460130:CDS | 35.0% | |
| AAGAGGCTGAAACTAGGTTA+AGG | - | chr3_3:57148780-57148799 | None:intergenic | 40.0% | |
| ATACATTGTGGATGAGGAAG+AGG | - | chr3_3:57148851-57148870 | None:intergenic | 40.0% | |
| ! | ATGTAAGGGCACAACATCAT+GGG | + | chr3_3:57148884-57148903 | Msa0460130:CDS | 40.0% |
| AGTTACTGTGCTCAAGATTC+AGG | + | chr3_3:57149032-57149051 | Msa0460130:CDS | 40.0% | |
| GTTTGTGTGTCTGTTGTCTA+AGG | + | chr3_3:57149185-57149204 | Msa0460130:intron | 40.0% | |
| ! | GTTGTCTAAGGTTGGAATCT+TGG | + | chr3_3:57149197-57149216 | Msa0460130:intron | 40.0% |
| ! | TCTAAGGTTGGAATCTTGGA+TGG | + | chr3_3:57149201-57149220 | Msa0460130:intron | 40.0% |
| CTAAGGTTGGAATCTTGGAT+GGG | + | chr3_3:57149202-57149221 | Msa0460130:intron | 40.0% | |
| GATGGGATGCACAATACAAA+GGG | + | chr3_3:57149224-57149243 | Msa0460130:CDS | 40.0% | |
| GGTGTGAGCTGTTTATTGAA+AGG | + | chr3_3:57149291-57149310 | Msa0460130:intron | 40.0% | |
| !! | CTGATTTGGGAACACATGAT+TGG | - | chr3_3:57149386-57149405 | None:intergenic | 40.0% |
| ATACTTATGGACAGAAGCAG+AGG | - | chr3_3:57149530-57149549 | None:intergenic | 40.0% | |
| GTAAAAGGAGAGGTTGTGTT+AGG | - | chr3_3:57149686-57149705 | None:intergenic | 40.0% | |
| ATGCATAGCAAGGCTAACAT+AGG | + | chr3_3:57149724-57149743 | Msa0460130:intron | 40.0% | |
| TGATATAGATTGTCGAGGTG+CGG | + | chr3_3:57149818-57149837 | Msa0460130:intron | 40.0% | |
| ATCCTATTACCTGTTTGGAC+AGG | + | chr3_3:57150047-57150066 | Msa0460130:intron | 40.0% | |
| TACCTGTCCAAACAGGTAAT+AGG | - | chr3_3:57150052-57150071 | None:intergenic | 40.0% | |
| ATTACCTGTTTGGACAGGTA+AGG | + | chr3_3:57150052-57150071 | Msa0460130:intron | 40.0% | |
| AAAACAACTACGCAAACAGC+AGG | - | chr3_3:57150154-57150173 | None:intergenic | 40.0% | |
| AGCACTTGAAGCAAAACACA+CGG | - | chr3_3:57150222-57150241 | None:intergenic | 40.0% | |
| !! | GTAGCAGGTTGTTAGTTTGT+AGG | + | chr3_3:57150347-57150366 | Msa0460130:intron | 40.0% |
| AACTGTCCTGCACTAAAACA+AGG | - | chr3_3:57150419-57150438 | None:intergenic | 40.0% | |
| TATGTGGTAGTATCTTCGGT+TGG | + | chr3_3:57150450-57150469 | Msa0460130:intron | 40.0% | |
| TAAAAAAGGCAGCTGAAGAC+AGG | - | chr3_3:57150488-57150507 | None:intergenic | 40.0% | |
| !!! | GTCTTCAGCTGCCTTTTTTA+TGG | + | chr3_3:57150488-57150507 | Msa0460130:intron | 40.0% |
| TGAACATCAACTCTAGCAGT+AGG | - | chr3_3:57150546-57150565 | None:intergenic | 40.0% | |
| GATGTAGAGTTATGTGCTTC+TGG | + | chr3_3:57150566-57150585 | Msa0460130:intron | 40.0% | |
| ! | ATAGTGTCCCTAGGTTGTTT+TGG | + | chr3_3:57150608-57150627 | Msa0460130:intron | 40.0% |
| !! | TAGTGTCCCTAGGTTGTTTT+GGG | + | chr3_3:57150609-57150628 | Msa0460130:intron | 40.0% |
| AAACAGCCCAAAACAACCTA+GGG | - | chr3_3:57150618-57150637 | None:intergenic | 40.0% | |
| ACACAAGACGAATTCGGAAT+CGG | - | chr3_3:57150728-57150747 | None:intergenic | 40.0% | |
| CATCATCGTTACTGTATAGC+AGG | + | chr3_3:57150870-57150889 | Msa0460130:CDS | 40.0% | |
| ACTTTGGCCTAATTAGGAGA+AGG | - | chr3_3:57150917-57150936 | None:intergenic | 40.0% | |
| ATAGCCCCTATAGGTGTTAA+AGG | + | chr3_3:57150949-57150968 | Msa0460130:intron | 40.0% | |
| TAGCCCCTATAGGTGTTAAA+GGG | + | chr3_3:57150950-57150969 | Msa0460130:intron | 40.0% | |
| AACCCCTTTAACACCTATAG+GGG | - | chr3_3:57150956-57150975 | None:intergenic | 40.0% | |
| GTAACCCCTTTAACACCTAT+AGG | - | chr3_3:57150958-57150977 | None:intergenic | 40.0% | |
| ! | CCTGCAAAGTTTGTTCATCA+AGG | - | chr3_3:57150981-57151000 | None:intergenic | 40.0% |
| CCTTGATGAACAAACTTTGC+AGG | + | chr3_3:57150978-57150997 | Msa0460130:intron | 40.0% | |
| TGATGAACAAACTTTGCAGG+TGG | + | chr3_3:57150981-57151000 | Msa0460130:intron | 40.0% | |
| CTTTGCAGGTGGATCTTAAA+AGG | + | chr3_3:57150992-57151011 | Msa0460130:intron | 40.0% | |
| GGTGTAATATGGCAAAGTAG+TGG | - | chr3_3:57151261-57151280 | None:intergenic | 40.0% | |
| CAAAATAACCATCCAGAAGG+GGG | - | chr3_3:57151282-57151301 | None:intergenic | 40.0% | |
| ATCCGACAGAAACAAATGAG+TGG | + | chr3_3:57151494-57151513 | Msa0460130:intron | 40.0% | |
| !! | TGCCACTCATTTGTTTCTGT+CGG | - | chr3_3:57151499-57151518 | None:intergenic | 40.0% |
| ! | TTCACCGCAGAAACTTTTCA+CGG | + | chr3_3:57151522-57151541 | Msa0460130:intron | 40.0% |
| ATCTGCAGAAAGCTAGTAGT+TGG | - | chr3_3:57151678-57151697 | None:intergenic | 40.0% | |
| GTTCGACAACAAGTACATAG+TGG | + | chr3_3:57151758-57151777 | Msa0460130:CDS | 40.0% | |
| !! | AAAATCATGTTGGCTCACAG+TGG | + | chr3_3:57151924-57151943 | Msa0460130:intron | 40.0% |
| TATGCATGTTTGGTATCTGC+CGG | - | chr3_3:57151952-57151971 | None:intergenic | 40.0% | |
| ATGAGACCATTTGGACAACA+TGG | - | chr3_3:57152208-57152227 | None:intergenic | 40.0% | |
| !! | CAACATCTTTTTGGTCCAAG+TGG | + | chr3_3:57152625-57152644 | Msa0460130:intron | 40.0% |
| TATTCAGCTCCCTTCATGTT+AGG | - | chr3_3:57152834-57152853 | None:intergenic | 40.0% | |
| ACCTTGAAATTCTTTCAGGC+TGG | + | chr3_3:57152996-57153015 | Msa0460130:intron | 40.0% | |
| ACCAGCCTGAAAGAATTTCA+AGG | - | chr3_3:57153000-57153019 | None:intergenic | 40.0% | |
| TCATAGACTTAGCTAGCTGA+GGG | - | chr3_3:57153088-57153107 | None:intergenic | 40.0% | |
| TTCATAGACTTAGCTAGCTG+AGG | - | chr3_3:57153089-57153108 | None:intergenic | 40.0% | |
| ATAAACAAGTGGGTGATGCT+TGG | + | chr3_3:57153115-57153134 | Msa0460130:exon | 40.0% | |
| TTGTGGACCTCAATTTCACA+AGG | - | chr3_3:57153248-57153267 | None:intergenic | 40.0% | |
| AACCTAGTTTCAGCCTCTTC+AGG | + | chr3_3:57148781-57148800 | Msa0460130:CDS | 45.0% | |
| ! | CATGTAAGGGCACAACATCA+TGG | + | chr3_3:57148883-57148902 | Msa0460130:CDS | 45.0% |
| GAATGATACCGCTGATGGTA+AGG | + | chr3_3:57148906-57148925 | Msa0460130:CDS | 45.0% | |
| ACTTGCAACCTTACCATCAG+CGG | - | chr3_3:57148917-57148936 | None:intergenic | 45.0% | |
| ! | GTGTGTCTGTTGTCTAAGGT+TGG | + | chr3_3:57149189-57149208 | Msa0460130:intron | 45.0% |
| GTTGGAATCTTGGATGGGAT+GGG | + | chr3_3:57149207-57149226 | Msa0460130:CDS | 45.0% | |
| GGATGGGATGCACAATACAA+AGG | + | chr3_3:57149223-57149242 | Msa0460130:CDS | 45.0% | |
| AGCTGCTAATACATCCTCCA+AGG | + | chr3_3:57149266-57149285 | Msa0460130:CDS | 45.0% | |
| GCTAATACATCCTCCAAGGA+AGG | + | chr3_3:57149270-57149289 | Msa0460130:CDS | 45.0% | |
| TAAACAGCTCACACCTTCCT+TGG | - | chr3_3:57149286-57149305 | None:intergenic | 45.0% | |
| CAAGGCTTATCCCACTAAGT+GGG | + | chr3_3:57149616-57149635 | Msa0460130:intron | 45.0% | |
| AAGGCTTATCCCACTAAGTG+GGG | + | chr3_3:57149617-57149636 | Msa0460130:intron | 45.0% | |
| !! | TTAGCCTTGCTATGCATAGC+CGG | - | chr3_3:57149721-57149740 | None:intergenic | 45.0% |
| GGAAGGGGATTTGGCTAATT+TGG | + | chr3_3:57149862-57149881 | Msa0460130:intron | 45.0% | |
| ! | ATGCAGATGGGTTTGAGTAG+AGG | + | chr3_3:57149986-57150005 | Msa0460130:intron | 45.0% |
| ! | TGCAGATGGGTTTGAGTAGA+GGG | + | chr3_3:57149987-57150006 | Msa0460130:intron | 45.0% |
| GTGGGATCCTATTACCTGTT+TGG | + | chr3_3:57150042-57150061 | Msa0460130:intron | 45.0% | |
| TGTTTGGACAGGTAAGGAGT+GGG | + | chr3_3:57150058-57150077 | Msa0460130:intron | 45.0% | |
| !!! | TGTGTTTTGGTTGGAGTCCT+TGG | + | chr3_3:57150089-57150108 | Msa0460130:intron | 45.0% |
| ! | AGCTTTGTGTCAGCATCAAC+AGG | - | chr3_3:57150192-57150211 | None:intergenic | 45.0% |
| ! | GTGTGTTTTGCTTCAAGTGC+TGG | + | chr3_3:57150221-57150240 | Msa0460130:intron | 45.0% |
| GGTGTGCTTTATGGCTGATT+TGG | + | chr3_3:57150368-57150387 | Msa0460130:intron | 45.0% | |
| ! | GTGCAGGACAGTTTCAGTTT+TGG | + | chr3_3:57150426-57150445 | Msa0460130:intron | 45.0% |
| TGGTGCATTATAGTGTCCCT+AGG | + | chr3_3:57150599-57150618 | Msa0460130:intron | 45.0% | |
| GAAACAGCCCAAAACAACCT+AGG | - | chr3_3:57150619-57150638 | None:intergenic | 45.0% | |
| ! | TATCTCCCTAGCTTGTGTGA+TGG | + | chr3_3:57150687-57150706 | Msa0460130:CDS | 45.0% |
| ! | ATCTCCCTAGCTTGTGTGAT+GGG | + | chr3_3:57150688-57150707 | Msa0460130:CDS | 45.0% |
| TTGACCCATCACACAAGCTA+GGG | - | chr3_3:57150695-57150714 | None:intergenic | 45.0% | |
| ATTGACCCATCACACAAGCT+AGG | - | chr3_3:57150696-57150715 | None:intergenic | 45.0% | |
| AGCCCCTATAGGTGTTAAAG+GGG | + | chr3_3:57150951-57150970 | Msa0460130:intron | 45.0% | |
| GATCTTAAAAGGAGCCAGGA+GGG | + | chr3_3:57151003-57151022 | Msa0460130:CDS | 45.0% | |
| AGCCAGAGTTATGATCGGTT+TGG | + | chr3_3:57151126-57151145 | Msa0460130:intron | 45.0% | |
| TGCCAAACCGATCATAACTC+TGG | - | chr3_3:57151131-57151150 | None:intergenic | 45.0% | |
| ! | ATCCAGAAGGGGGTGTAATA+TGG | - | chr3_3:57151272-57151291 | None:intergenic | 45.0% |
| ATATTACACCCCCTTCTGGA+TGG | + | chr3_3:57151271-57151290 | Msa0460130:intron | 45.0% | |
| ATGCGGGAACAGATTATCTC+TGG | + | chr3_3:57151411-57151430 | Msa0460130:intron | 45.0% | |
| ! | ATCTCTGGCGAGGTTTTTAC+TGG | + | chr3_3:57151426-57151445 | Msa0460130:intron | 45.0% |
| ! | TCTCTGGCGAGGTTTTTACT+GGG | + | chr3_3:57151427-57151446 | Msa0460130:intron | 45.0% |
| GACAGAAACAAATGAGTGGC+AGG | + | chr3_3:57151498-57151517 | Msa0460130:intron | 45.0% | |
| TCTGCCGTGAAAAGTTTCTG+CGG | - | chr3_3:57151529-57151548 | None:intergenic | 45.0% | |
| AGACAGCCATGTTGTCCAAA+TGG | + | chr3_3:57152199-57152218 | Msa0460130:intron | 45.0% | |
| AAGCAGTAGTGTAGGTTCCT+TGG | + | chr3_3:57152515-57152534 | Msa0460130:intron | 45.0% | |
| GAAATTCTTTCAGGCTGGTG+AGG | + | chr3_3:57153001-57153020 | Msa0460130:intron | 45.0% | |
| GAGGATGAAACCCTTTCAGA+TGG | + | chr3_3:57153044-57153063 | Msa0460130:CDS | 45.0% | |
| TTGTTCTTTGCACTGAGCTG+CGG | + | chr3_3:57153307-57153326 | Msa0460130:three_prime_UTR | 45.0% | |
| CTCCTGAAGAGGCTGAAACT+AGG | - | chr3_3:57148786-57148805 | None:intergenic | 50.0% | |
| CTAGTTTCAGCCTCTTCAGG+AGG | + | chr3_3:57148784-57148803 | Msa0460130:CDS | 50.0% | |
| ! | AGCCTCTTCAGGAGGTGTAA+TGG | + | chr3_3:57148792-57148811 | Msa0460130:CDS | 50.0% |
| ! | GCCTCTTCAGGAGGTGTAAT+GGG | + | chr3_3:57148793-57148812 | Msa0460130:CDS | 50.0% |
| TCCCATTACACCTCCTGAAG+AGG | - | chr3_3:57148797-57148816 | None:intergenic | 50.0% | |
| ! | TCTTCAGGAGGTGTAATGGG+AGG | + | chr3_3:57148796-57148815 | Msa0460130:CDS | 50.0% |
| TGTGGATGAGGAAGAGGATG+AGG | - | chr3_3:57148845-57148864 | None:intergenic | 50.0% | |
| CATGGGAATGATACCGCTGA+TGG | + | chr3_3:57148901-57148920 | Msa0460130:CDS | 50.0% | |
| GGTTGGAATCTTGGATGGGA+TGG | + | chr3_3:57149206-57149225 | Msa0460130:intron | 50.0% | |
| CCACTTAGTGGGATAAGCCT+TGG | - | chr3_3:57149618-57149637 | None:intergenic | 50.0% | |
| CCAAGGCTTATCCCACTAAG+TGG | + | chr3_3:57149615-57149634 | Msa0460130:intron | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | + | chr3_3:57149621-57149640 | Msa0460130:intron | 50.0% | |
| TATAGCCGACCCCACTTAGT+GGG | - | chr3_3:57149629-57149648 | None:intergenic | 50.0% | |
| ! | CACAACCTCTCCTTTTACCC+AGG | + | chr3_3:57149688-57149707 | Msa0460130:intron | 50.0% |
| TCAAGCCTGGGTAAAAGGAG+AGG | - | chr3_3:57149696-57149715 | None:intergenic | 50.0% | |
| ! | CTTTTACCCAGGCTTGAGAC+CGG | + | chr3_3:57149699-57149718 | Msa0460130:intron | 50.0% |
| TATAGATTGTCGAGGTGCGG+TGG | + | chr3_3:57149821-57149840 | Msa0460130:intron | 50.0% | |
| ATAGATTGTCGAGGTGCGGT+GGG | + | chr3_3:57149822-57149841 | Msa0460130:intron | 50.0% | |
| CTCACTGCCTTCTCTATGAG+TGG | + | chr3_3:57150017-57150036 | Msa0460130:intron | 50.0% | |
| ACTGCCTTCTCTATGAGTGG+AGG | + | chr3_3:57150020-57150039 | Msa0460130:intron | 50.0% | |
| CCTTCTCTATGAGTGGAGGT+GGG | + | chr3_3:57150024-57150043 | Msa0460130:intron | 50.0% | |
| CACTCCTTACCTGTCCAAAC+AGG | - | chr3_3:57150059-57150078 | None:intergenic | 50.0% | |
| CTGTTTGGACAGGTAAGGAG+TGG | + | chr3_3:57150057-57150076 | Msa0460130:intron | 50.0% | |
| !!! | GTGAGGAGGTGTGTTTTGGT+TGG | + | chr3_3:57150080-57150099 | Msa0460130:intron | 50.0% |
| ! | GTCCTTGGCGAAGAGTTTTC+TGG | + | chr3_3:57150104-57150123 | Msa0460130:intron | 50.0% |
| GACCAGAAAACTCTTCGCCA+AGG | - | chr3_3:57150109-57150128 | None:intergenic | 50.0% | |
| ! | TTGGTGTTCACACTGCAGTG+TGG | + | chr3_3:57150387-57150406 | Msa0460130:intron | 50.0% |
| TGTTCACACTGCAGTGTGGT+TGG | + | chr3_3:57150391-57150410 | Msa0460130:intron | 50.0% | |
| GTTCACACTGCAGTGTGGTT+GGG | + | chr3_3:57150392-57150411 | Msa0460130:intron | 50.0% | |
| TTCACACTGCAGTGTGGTTG+GGG | + | chr3_3:57150393-57150412 | Msa0460130:intron | 50.0% | |
| !!! | TTGGGGCCTTGTTTTAGTGC+AGG | + | chr3_3:57150410-57150429 | Msa0460130:intron | 50.0% |
| ! | GTGCTTCTGGTCTGCAGTTT+TGG | + | chr3_3:57150579-57150598 | Msa0460130:intron | 50.0% |
| GGTGGATCTTAAAAGGAGCC+AGG | + | chr3_3:57150999-57151018 | Msa0460130:intron | 50.0% | |
| GGATCTTAAAAGGAGCCAGG+AGG | + | chr3_3:57151002-57151021 | Msa0460130:CDS | 50.0% | |
| TGCCATATTACACCCCCTTC+TGG | + | chr3_3:57151267-57151286 | Msa0460130:intron | 50.0% | |
| GGAACAGATTATCTCTGGCG+AGG | + | chr3_3:57151416-57151435 | Msa0460130:intron | 50.0% | |
| !! | ATGTTGGCTCACAGTGGTTC+CGG | + | chr3_3:57151930-57151949 | Msa0460130:intron | 50.0% |
| GTCCAAGTGGAAGAGTCCTT+GGG | + | chr3_3:57152638-57152657 | Msa0460130:intron | 50.0% | |
| ATCCCAAGGACTCTTCCACT+TGG | - | chr3_3:57152643-57152662 | None:intergenic | 50.0% | |
| ! | TTCAGGCTGGTGAGGTACTA+TGG | + | chr3_3:57153009-57153028 | Msa0460130:intron | 50.0% |
| GGTTTCATCCTCTCTCTGTG+GGG | - | chr3_3:57153036-57153055 | None:intergenic | 50.0% | |
| GGGTTTCATCCTCTCTCTGT+GGG | - | chr3_3:57153037-57153056 | None:intergenic | 50.0% | |
| AGGGTTTCATCCTCTCTCTG+TGG | - | chr3_3:57153038-57153057 | None:intergenic | 50.0% | |
| ACAGCTCACACCTTCCTTGG+AGG | - | chr3_3:57149283-57149302 | None:intergenic | 55.0% | |
| CTATAGCCGACCCCACTTAG+TGG | - | chr3_3:57149630-57149649 | None:intergenic | 55.0% | |
| CGGTCTCAAGCCTGGGTAAA+AGG | - | chr3_3:57149701-57149720 | None:intergenic | 55.0% | |
| GAGACCGGCTATGCATAGCA+AGG | + | chr3_3:57149714-57149733 | Msa0460130:intron | 55.0% | |
| GCCTTCTCTATGAGTGGAGG+TGG | + | chr3_3:57150023-57150042 | Msa0460130:intron | 55.0% | |
| CCCACCTCCACTCATAGAGA+AGG | - | chr3_3:57150027-57150046 | None:intergenic | 55.0% | |
| !! | GTGGGTGAGGAGGTGTGTTT+TGG | + | chr3_3:57150076-57150095 | Msa0460130:intron | 55.0% |
| CTTAAAAGGAGCCAGGAGGG+TGG | + | chr3_3:57151006-57151025 | Msa0460130:CDS | 55.0% | |
| AGCATGTTTCTCCACCCTCC+TGG | - | chr3_3:57151020-57151039 | None:intergenic | 55.0% | |
| ! | CTGGCGAGGTTTTTACTGGG+TGG | + | chr3_3:57151430-57151449 | Msa0460130:intron | 55.0% |
| GGTCCAAGTGGAAGAGTCCT+TGG | + | chr3_3:57152637-57152656 | Msa0460130:intron | 55.0% | |
| ACTATGGACCCCACAGAGAG+AGG | + | chr3_3:57153025-57153044 | Msa0460130:CDS | 55.0% | |
| TTTGCACTGAGCTGCGGACA+AGG | + | chr3_3:57153313-57153332 | Msa0460130:three_prime_UTR | 55.0% | |
| GCATAGCCGGTCTCAAGCCT+GGG | - | chr3_3:57149708-57149727 | None:intergenic | 60.0% | |
| TGCATAGCCGGTCTCAAGCC+TGG | - | chr3_3:57149709-57149728 | None:intergenic | 60.0% | |
| GGACAGGTAAGGAGTGGGTG+AGG | + | chr3_3:57150063-57150082 | Msa0460130:intron | 60.0% | |
| CAGGTAAGGAGTGGGTGAGG+AGG | + | chr3_3:57150066-57150085 | Msa0460130:intron | 60.0% | |
| TGGTCGCTGCTGTCAGTCTG+TGG | + | chr3_3:57150124-57150143 | Msa0460130:intron | 60.0% | |
| GGTCGCTGCTGTCAGTCTGT+GGG | + | chr3_3:57150125-57150144 | Msa0460130:intron | 60.0% | |
| TGTCGAGGTGCGGTGGGTAG+AGG | + | chr3_3:57149828-57149847 | Msa0460130:intron | 65.0% | |
| CGCTGCTGTCAGTCTGTGGG+AGG | + | chr3_3:57150128-57150147 | Msa0460130:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 57148703 | 57153349 | 57148703 | ID=Msa0460130;Name=Msa0460130 |
| chr3_3 | mRNA | 57148703 | 57153349 | 57148703 | ID=Msa0460130-mRNA-1;Parent=Msa0460130;Name=Msa0460130-mRNA-1;_AED=0.36;_eAED=0.36;_QI=0|0.55|0.5|1|0.22|0.2|10|209|328 |
| chr3_3 | exon | 57148703 | 57148820 | 57148703 | ID=Msa0460130-mRNA-1:exon:11592;Parent=Msa0460130-mRNA-1 |
| chr3_3 | exon | 57148836 | 57149053 | 57148836 | ID=Msa0460130-mRNA-1:exon:11593;Parent=Msa0460130-mRNA-1 |
| chr3_3 | exon | 57149207 | 57149291 | 57149207 | ID=Msa0460130-mRNA-1:exon:11594;Parent=Msa0460130-mRNA-1 |
| chr3_3 | exon | 57150685 | 57150780 | 57150685 | ID=Msa0460130-mRNA-1:exon:11595;Parent=Msa0460130-mRNA-1 |
| chr3_3 | exon | 57150847 | 57150902 | 57150847 | ID=Msa0460130-mRNA-1:exon:11596;Parent=Msa0460130-mRNA-1 |
| chr3_3 | exon | 57151000 | 57151117 | 57151000 | ID=Msa0460130-mRNA-1:exon:11597;Parent=Msa0460130-mRNA-1 |
| chr3_3 | exon | 57151706 | 57151779 | 57151706 | ID=Msa0460130-mRNA-1:exon:11598;Parent=Msa0460130-mRNA-1 |
| chr3_3 | exon | 57152792 | 57152908 | 57152792 | ID=Msa0460130-mRNA-1:exon:11599;Parent=Msa0460130-mRNA-1 |
| chr3_3 | exon | 57153014 | 57153268 | 57153014 | ID=Msa0460130-mRNA-1:exon:11600;Parent=Msa0460130-mRNA-1 |
| chr3_3 | exon | 57153291 | 57153349 | 57153291 | ID=Msa0460130-mRNA-1:exon:11601;Parent=Msa0460130-mRNA-1 |
| chr3_3 | CDS | 57148703 | 57148820 | 57148703 | ID=Msa0460130-mRNA-1:cds;Parent=Msa0460130-mRNA-1 |
| chr3_3 | CDS | 57148836 | 57149053 | 57148836 | ID=Msa0460130-mRNA-1:cds;Parent=Msa0460130-mRNA-1 |
| chr3_3 | CDS | 57149207 | 57149291 | 57149207 | ID=Msa0460130-mRNA-1:cds;Parent=Msa0460130-mRNA-1 |
| chr3_3 | CDS | 57150685 | 57150780 | 57150685 | ID=Msa0460130-mRNA-1:cds;Parent=Msa0460130-mRNA-1 |
| chr3_3 | CDS | 57150847 | 57150902 | 57150847 | ID=Msa0460130-mRNA-1:cds;Parent=Msa0460130-mRNA-1 |
| chr3_3 | CDS | 57151000 | 57151117 | 57151000 | ID=Msa0460130-mRNA-1:cds;Parent=Msa0460130-mRNA-1 |
| chr3_3 | CDS | 57151706 | 57151779 | 57151706 | ID=Msa0460130-mRNA-1:cds;Parent=Msa0460130-mRNA-1 |
| chr3_3 | CDS | 57152792 | 57152908 | 57152792 | ID=Msa0460130-mRNA-1:cds;Parent=Msa0460130-mRNA-1 |
| chr3_3 | CDS | 57153014 | 57153118 | 57153014 | ID=Msa0460130-mRNA-1:cds;Parent=Msa0460130-mRNA-1 |
| chr3_3 | three_prime_UTR | 57153119 | 57153268 | 57153119 | ID=Msa0460130-mRNA-1:three_prime_utr;Parent=Msa0460130-mRNA-1 |
| chr3_3 | three_prime_UTR | 57153291 | 57153349 | 57153291 | ID=Msa0460130-mRNA-1:three_prime_utr;Parent=Msa0460130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
