Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372180 | XP_003601506.1 | 88.117 | 446 | 11 | 3 | 1 | 404 | 179 | 624 | 0.0 | 796 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372180 | sp|O04478|GUN7_ARATH | 58.520 | 446 | 143 | 3 | 1 | 404 | 178 | 623 | 6.57e-177 | 510 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372180 | G7J8S6 | 88.117 | 446 | 11 | 3 | 1 | 404 | 179 | 624 | 0.0 | 796 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0051910 | Msa0372180 | 0.800433 | 1.444620e-48 | -8.615850e-47 |
| Msa0107830 | Msa0372180 | 0.800482 | 1.411706e-48 | -8.615850e-47 |
| Msa0177550 | Msa0372180 | 0.807736 | 4.369218e-50 | -8.615850e-47 |
| Msa0372180 | Msa0390170 | 0.802569 | 5.271557e-49 | -8.615850e-47 |
| Msa0372180 | Msa0418160 | 0.802778 | 4.773288e-49 | -8.615850e-47 |
| Msa0372180 | Msa0420890 | 0.852764 | 3.726869e-61 | -8.615850e-47 |
| Msa0372180 | Msa0438520 | 0.824614 | 7.338292e-54 | -8.615850e-47 |
| Msa0372180 | Msa0512280 | 0.856387 | 3.330118e-62 | -8.615850e-47 |
| Msa0372180 | Msa0557240 | 0.808821 | 2.565616e-50 | -8.615850e-47 |
| Msa0372180 | Msa0561110 | 0.800058 | 1.721806e-48 | -8.615850e-47 |
| Msa0372180 | Msa0565180 | 0.801223 | 9.966769e-49 | -8.615850e-47 |
| Msa0372180 | Msa0597170 | 0.805456 | 1.323310e-49 | -8.615850e-47 |
| Msa0372180 | Msa0597800 | 0.802149 | 6.433716e-49 | -8.615850e-47 |
| Msa0372180 | Msa0597820 | 0.806924 | 6.493446e-50 | -8.615850e-47 |
| Msa0372180 | Msa0614960 | 0.808963 | 2.392461e-50 | -8.615850e-47 |
| Msa0372180 | Msa0643840 | 0.802948 | 4.402861e-49 | -8.615850e-47 |
| Msa0372180 | Msa0652590 | 0.817499 | 3.195678e-52 | -8.615850e-47 |
| Msa0372180 | Msa0652600 | 0.801615 | 8.281407e-49 | -8.615850e-47 |
| Msa0372180 | Msa0652610 | 0.805640 | 1.211044e-49 | -8.615850e-47 |
| Msa0372180 | Msa0675620 | 0.807537 | 4.817009e-50 | -8.615850e-47 |
| Msa0372180 | Msa0694320 | 0.818243 | 2.169569e-52 | -8.615850e-47 |
| Msa0372180 | Msa0699170 | 0.814555 | 1.451309e-51 | -8.615850e-47 |
| Msa0372180 | Msa0716620 | 0.808698 | 2.724798e-50 | -8.615850e-47 |
| Msa0372180 | Msa0731580 | 0.817693 | 2.889201e-52 | -8.615850e-47 |
| Msa0372180 | Msa0799120 | 0.822453 | 2.350041e-53 | -8.615850e-47 |
| Msa0372180 | Msa0806910 | 0.806025 | 1.005244e-49 | -8.615850e-47 |
| Msa0372180 | Msa0809920 | 0.803532 | 3.333567e-49 | -8.615850e-47 |
| Msa0372180 | Msa0814160 | 0.806621 | 7.525314e-50 | -8.615850e-47 |
| Msa0372180 | Msa0826360 | 0.801154 | 1.029288e-48 | -8.615850e-47 |
| Msa0372180 | Msa0850480 | 0.803791 | 2.944950e-49 | -8.615850e-47 |
| Msa0372180 | Msa0865830 | 0.809478 | 1.854994e-50 | -8.615850e-47 |
| Msa0372180 | Msa0874750 | 0.823830 | 1.121522e-53 | -8.615850e-47 |
| Msa0372180 | Msa0945320 | 0.800934 | 1.141766e-48 | -8.615850e-47 |
| Msa0372180 | Msa0976400 | 0.812774 | 3.578940e-51 | -8.615850e-47 |
| Msa0372180 | Msa1003920 | 0.808791 | 2.603897e-50 | -8.615850e-47 |
| Msa0372180 | Msa1022490 | 0.802133 | 6.482834e-49 | -8.615850e-47 |
| Msa0372180 | Msa1022510 | 0.814585 | 1.429798e-51 | -8.615850e-47 |
| Msa0372180 | Msa1035050 | 0.804076 | 2.570103e-49 | -8.615850e-47 |
| Msa0372180 | Msa1061670 | 0.802349 | 5.851388e-49 | -8.615850e-47 |
| Msa0372180 | Msa1062070 | 0.802512 | 5.415849e-49 | -8.615850e-47 |
| Msa0372180 | Msa1075090 | 0.804776 | 1.836687e-49 | -8.615850e-47 |
| Msa0372180 | Msa1106680 | 0.817662 | 2.936093e-52 | -8.615850e-47 |
| Msa0372180 | Msa1108560 | 0.807424 | 5.089473e-50 | -8.615850e-47 |
| Msa0372180 | Msa1136630 | 0.817266 | 3.605918e-52 | -8.615850e-47 |
| Msa0372180 | Msa1150750 | 0.800842 | 1.192265e-48 | -8.615850e-47 |
| Msa0372180 | Msa1162430 | 0.808850 | 2.528763e-50 | -8.615850e-47 |
| Msa0372180 | Msa1208050 | 0.801912 | 7.197962e-49 | -8.615850e-47 |
| Msa0372180 | Msa1208140 | 0.811531 | 6.682034e-51 | -8.615850e-47 |
| Msa0372180 | Msa1240710 | 0.802396 | 5.724020e-49 | -8.615850e-47 |
| Msa0372180 | Msa1279750 | 0.800707 | 1.269954e-48 | -8.615850e-47 |
| Msa0372180 | Msa1280460 | 0.802283 | 6.037807e-49 | -8.615850e-47 |
| Msa0372180 | Msa1296490 | 0.804532 | 2.065090e-49 | -8.615850e-47 |
| Msa0372180 | Msa1320160 | 0.832960 | 7.013994e-56 | -8.615850e-47 |
| Msa0372180 | Msa1443990 | 0.804949 | 1.690055e-49 | -8.615850e-47 |
| Msa0372180 | Msa1459930 | 0.800775 | 1.230343e-48 | -8.615850e-47 |
| Msa0242720 | Msa0372180 | 0.828646 | 8.010156e-55 | -8.615850e-47 |
| Msa0320170 | Msa0372180 | 0.804030 | 2.627141e-49 | -8.615850e-47 |
| Msa0346170 | Msa0372180 | 0.805663 | 1.197511e-49 | -8.615850e-47 |
| Msa0348370 | Msa0372180 | 0.800004 | 1.766502e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372180 | MtrunA17_Chr3g0120661 | 88.117 | 446 | 11 | 3 | 1 | 404 | 179 | 624 | 0.0 | 796 |
| Msa0372180 | MtrunA17_Chr2g0291461 | 55.556 | 432 | 146 | 5 | 1 | 388 | 177 | 606 | 1.59e-149 | 437 |
| Msa0372180 | MtrunA17_Chr3g0126111 | 39.954 | 438 | 207 | 11 | 2 | 388 | 169 | 601 | 4.73e-92 | 288 |
| Msa0372180 | MtrunA17_Chr4g0072811 | 63.492 | 189 | 33 | 3 | 247 | 399 | 8 | 196 | 2.95e-75 | 232 |
| Msa0372180 | MtrunA17_Chr3g0142501 | 34.988 | 423 | 214 | 13 | 1 | 377 | 117 | 524 | 3.21e-56 | 193 |
| Msa0372180 | MtrunA17_Chr8g0372031 | 35.629 | 421 | 206 | 14 | 1 | 373 | 123 | 526 | 3.03e-52 | 182 |
| Msa0372180 | MtrunA17_Chr4g0038131 | 32.547 | 424 | 224 | 13 | 1 | 377 | 90 | 498 | 4.18e-52 | 184 |
| Msa0372180 | MtrunA17_Chr8g0388051 | 34.670 | 424 | 213 | 18 | 1 | 376 | 89 | 496 | 1.13e-51 | 182 |
| Msa0372180 | MtrunA17_Chr3g0119371 | 33.254 | 421 | 209 | 16 | 1 | 368 | 101 | 502 | 1.35e-50 | 178 |
| Msa0372180 | MtrunA17_Chr5g0439311 | 31.614 | 446 | 223 | 18 | 1 | 387 | 92 | 514 | 4.65e-50 | 176 |
| Msa0372180 | MtrunA17_Chr3g0119821 | 32.933 | 416 | 210 | 17 | 1 | 368 | 96 | 490 | 4.19e-48 | 171 |
| Msa0372180 | MtrunA17_Chr5g0444721 | 30.185 | 487 | 207 | 17 | 1 | 371 | 95 | 564 | 7.20e-44 | 160 |
| Msa0372180 | MtrunA17_Chr3g0086311 | 32.134 | 417 | 213 | 17 | 1 | 373 | 91 | 481 | 2.70e-42 | 154 |
| Msa0372180 | MtrunA17_Chr5g0397181 | 31.148 | 427 | 217 | 16 | 1 | 378 | 1 | 399 | 3.87e-42 | 152 |
| Msa0372180 | MtrunA17_Chr1g0164201 | 33.413 | 416 | 212 | 16 | 1 | 371 | 86 | 481 | 2.69e-40 | 149 |
| Msa0372180 | MtrunA17_Chr3g0145261 | 31.981 | 419 | 212 | 17 | 1 | 368 | 85 | 481 | 5.13e-40 | 148 |
| Msa0372180 | MtrunA17_Chr8g0391391 | 33.173 | 416 | 211 | 17 | 1 | 368 | 91 | 487 | 1.78e-39 | 147 |
| Msa0372180 | MtrunA17_Chr3g0080171 | 33.976 | 415 | 204 | 19 | 1 | 368 | 86 | 477 | 2.80e-39 | 146 |
| Msa0372180 | MtrunA17_Chr1g0195271 | 32.715 | 431 | 206 | 16 | 1 | 376 | 100 | 501 | 4.71e-39 | 146 |
| Msa0372180 | MtrunA17_Chr5g0397201 | 30.193 | 414 | 224 | 13 | 1 | 371 | 101 | 492 | 7.44e-39 | 145 |
| Msa0372180 | MtrunA17_Chr4g0018361 | 31.517 | 422 | 215 | 18 | 1 | 373 | 95 | 491 | 2.91e-36 | 138 |
| Msa0372180 | MtrunA17_Chr4g0018301 | 32.212 | 416 | 207 | 17 | 1 | 368 | 106 | 494 | 2.81e-35 | 135 |
| Msa0372180 | MtrunA17_Chr3g0136381 | 30.841 | 321 | 181 | 14 | 1 | 308 | 91 | 383 | 1.82e-31 | 124 |
| Msa0372180 | MtrunA17_Chr1g0164181 | 32.190 | 379 | 174 | 17 | 1 | 368 | 22 | 328 | 1.42e-24 | 103 |
| Msa0372180 | MtrunA17_Chr4g0018341 | 29.851 | 268 | 130 | 10 | 144 | 368 | 21 | 273 | 4.50e-20 | 89.4 |
| Msa0372180 | MtrunA17_Chr7g0269571 | 37.895 | 95 | 56 | 1 | 285 | 376 | 120 | 214 | 5.26e-15 | 73.9 |
| Msa0372180 | MtrunA17_Chr4g0022271 | 31.757 | 148 | 60 | 6 | 243 | 352 | 8 | 152 | 8.07e-12 | 63.5 |
| Msa0372180 | MtrunA17_Chr4g0018351 | 38.889 | 90 | 43 | 3 | 1 | 90 | 91 | 168 | 2.67e-11 | 62.8 |
| Msa0372180 | MtrunA17_Chr3g0136371 | 40.000 | 90 | 45 | 4 | 275 | 357 | 2 | 89 | 7.97e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372180 | AT1G65610.1 | 58.520 | 446 | 143 | 3 | 1 | 404 | 178 | 623 | 6.68e-178 | 510 |
| Msa0372180 | AT5G49720.1 | 54.128 | 436 | 149 | 8 | 1 | 388 | 173 | 605 | 5.38e-139 | 410 |
| Msa0372180 | AT4G24260.1 | 53.089 | 437 | 156 | 8 | 1 | 391 | 174 | 607 | 3.28e-133 | 395 |
| Msa0372180 | AT4G24260.3 | 54.984 | 311 | 123 | 6 | 1 | 296 | 174 | 482 | 1.83e-89 | 279 |
| Msa0372180 | AT4G24260.2 | 52.490 | 261 | 110 | 5 | 1 | 249 | 174 | 432 | 8.73e-71 | 229 |
| Msa0372180 | AT1G75680.1 | 37.037 | 405 | 196 | 12 | 1 | 362 | 117 | 505 | 2.19e-56 | 194 |
| Msa0372180 | AT1G19940.2 | 35.024 | 414 | 200 | 13 | 1 | 366 | 108 | 500 | 3.14e-55 | 190 |
| Msa0372180 | AT1G19940.1 | 35.024 | 414 | 200 | 13 | 1 | 366 | 108 | 500 | 3.14e-55 | 190 |
| Msa0372180 | AT4G11050.2 | 32.751 | 458 | 232 | 20 | 1 | 404 | 87 | 522 | 1.55e-51 | 181 |
| Msa0372180 | AT4G11050.3 | 32.751 | 458 | 232 | 20 | 1 | 404 | 87 | 522 | 4.07e-51 | 181 |
| Msa0372180 | AT4G11050.1 | 32.751 | 458 | 232 | 20 | 1 | 404 | 87 | 522 | 4.76e-51 | 181 |
| Msa0372180 | AT2G32990.1 | 33.014 | 418 | 214 | 16 | 1 | 368 | 100 | 501 | 2.05e-48 | 172 |
| Msa0372180 | AT4G02290.2 | 36.211 | 417 | 194 | 19 | 1 | 368 | 1 | 394 | 8.02e-47 | 165 |
| Msa0372180 | AT1G64390.1 | 33.017 | 421 | 218 | 17 | 1 | 373 | 86 | 490 | 2.05e-46 | 168 |
| Msa0372180 | AT2G44570.1 | 31.971 | 416 | 220 | 13 | 1 | 371 | 94 | 491 | 8.71e-46 | 164 |
| Msa0372180 | AT4G02290.1 | 36.211 | 417 | 194 | 19 | 1 | 368 | 113 | 506 | 9.44e-46 | 165 |
| Msa0372180 | AT1G22880.2 | 34.211 | 418 | 198 | 18 | 1 | 368 | 1 | 391 | 3.51e-45 | 161 |
| Msa0372180 | AT1G02800.1 | 35.154 | 421 | 203 | 17 | 1 | 374 | 104 | 501 | 1.33e-44 | 161 |
| Msa0372180 | AT1G22880.1 | 34.211 | 418 | 198 | 18 | 1 | 368 | 85 | 475 | 1.93e-44 | 160 |
| Msa0372180 | AT3G43860.2 | 32.057 | 418 | 212 | 15 | 1 | 373 | 95 | 485 | 4.92e-44 | 160 |
| Msa0372180 | AT3G43860.1 | 32.057 | 418 | 212 | 15 | 1 | 373 | 95 | 485 | 4.92e-44 | 160 |
| Msa0372180 | AT4G09740.1 | 29.524 | 420 | 226 | 14 | 1 | 375 | 84 | 478 | 1.50e-42 | 155 |
| Msa0372180 | AT1G71380.1 | 33.652 | 419 | 199 | 18 | 1 | 368 | 85 | 475 | 5.80e-42 | 154 |
| Msa0372180 | AT1G70710.1 | 33.092 | 414 | 211 | 17 | 1 | 368 | 89 | 482 | 1.90e-41 | 153 |
| Msa0372180 | AT4G23560.1 | 32.464 | 422 | 213 | 16 | 1 | 376 | 84 | 479 | 2.19e-41 | 152 |
| Msa0372180 | AT1G23210.1 | 33.092 | 414 | 211 | 18 | 1 | 368 | 89 | 482 | 2.44e-40 | 150 |
| Msa0372180 | AT1G48930.1 | 32.446 | 413 | 217 | 13 | 1 | 366 | 91 | 488 | 2.95e-40 | 151 |
| Msa0372180 | AT4G39000.1 | 32.624 | 423 | 215 | 16 | 1 | 373 | 86 | 488 | 2.81e-38 | 144 |
| Msa0372180 | AT2G44550.1 | 31.643 | 414 | 216 | 15 | 1 | 368 | 94 | 486 | 4.94e-38 | 143 |
| Msa0372180 | AT4G39010.1 | 30.969 | 423 | 230 | 18 | 1 | 377 | 90 | 496 | 8.72e-38 | 143 |
| Msa0372180 | AT4G38990.2 | 30.404 | 421 | 222 | 16 | 1 | 368 | 84 | 486 | 1.95e-37 | 142 |
| Msa0372180 | AT1G19940.3 | 35.430 | 302 | 160 | 11 | 1 | 287 | 108 | 389 | 2.56e-37 | 140 |
| Msa0372180 | AT2G44540.1 | 30.843 | 415 | 222 | 15 | 1 | 368 | 94 | 490 | 8.44e-35 | 134 |
| Msa0372180 | AT2G44560.1 | 30.361 | 415 | 227 | 15 | 1 | 371 | 94 | 490 | 3.20e-30 | 122 |
| Msa0372180 | AT2G44570.2 | 33.798 | 287 | 164 | 10 | 1 | 279 | 94 | 362 | 5.87e-27 | 111 |
| Msa0372180 | AT4G39010.2 | 38.043 | 184 | 94 | 9 | 1 | 175 | 90 | 262 | 2.61e-24 | 103 |
| Msa0372180 | AT1G22880.3 | 36.290 | 248 | 122 | 12 | 1 | 236 | 85 | 308 | 3.82e-20 | 91.3 |
| Msa0372180 | AT4G38990.1 | 28.322 | 286 | 157 | 13 | 1 | 277 | 84 | 330 | 3.36e-14 | 73.6 |
Find 95 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCCAGAGAACTCATTAAA+TGG | 0.258995 | 3_1:-70486086 | Msa0372180:CDS |
| TAACCAGTTGAGTTATAAAA+AGG | 0.260842 | 3_1:+70485385 | None:intergenic |
| ATCAATTCAATGTCTTTAAC+TGG | 0.265648 | 3_1:-70485090 | Msa0372180:CDS |
| CGTGGATAGCTCATGTCTTC+TGG | 0.287615 | 3_1:+70485601 | None:intergenic |
| CTGTAATGTTGTTAGGATTT+CGG | 0.297943 | 3_1:+70484173 | None:intergenic |
| TGTGCTTGTTAAGGAAATTA+AGG | 0.304790 | 3_1:+70484045 | None:intergenic |
| ATTGCTCCTGTAATGTTGTT+AGG | 0.311527 | 3_1:+70484166 | None:intergenic |
| TGAAATTGGTCAAAACGATT+TGG | 0.351632 | 3_1:+70484133 | None:intergenic |
| TTTGAAGCTATTCCACCATT+TGG | 0.352217 | 3_1:-70483992 | Msa0372180:CDS |
| TTTGAAGGACCTGACCTTGC+AGG | 0.353162 | 3_1:-70485562 | Msa0372180:CDS |
| ATGGAAGCCAAAGGTGTTCC+TGG | 0.353530 | 3_1:-70484862 | Msa0372180:CDS |
| TTCCAAGGAGGTGGTGGAGG+TGG | 0.363591 | 3_1:+70483959 | None:intergenic |
| CGAAATCCTAACAACATTAC+AGG | 0.366600 | 3_1:-70484172 | Msa0372180:CDS |
| GTGGATCACTGAATGGTTCT+AGG | 0.369729 | 3_1:-70485654 | Msa0372180:CDS |
| TAATCCTGGTTACCCTTATG+AGG | 0.370170 | 3_1:-70485167 | Msa0372180:CDS |
| ATGTTGTTAGGATTTCGGTT+AGG | 0.371448 | 3_1:+70484178 | None:intergenic |
| TGTTGTTAGGATTTCGGTTA+GGG | 0.380281 | 3_1:+70484179 | None:intergenic |
| TTGACCAATTTCATGATTCA+AGG | 0.383673 | 3_1:-70484123 | Msa0372180:CDS |
| TAAAATGCCTTGGCATTCTT+AGG | 0.383795 | 3_1:+70485274 | None:intergenic |
| TGCCAACAGTAGTGATCATC+TGG | 0.384464 | 3_1:+70485628 | None:intergenic |
| TTGCTATGACAATGCTAAGT+TGG | 0.392718 | 3_1:-70486158 | Msa0372180:CDS |
| TGCCAGAGAACTCATTAAAT+GGG | 0.398898 | 3_1:-70486085 | Msa0372180:CDS |
| TGGTAAGACTAGTAACATTA+TGG | 0.398981 | 3_1:+70485128 | None:intergenic |
| ATGCCGCATTGACAACATAT+TGG | 0.399475 | 3_1:+70484911 | None:intergenic |
| GCCATTTCTCCTGCAAGGTC+AGG | 0.400536 | 3_1:+70485553 | None:intergenic |
| TTGGCATTCTTAGGCACATC+AGG | 0.410800 | 3_1:+70485283 | None:intergenic |
| TATACTGAACCAACTTTAGC+TGG | 0.415273 | 3_1:-70484088 | Msa0372180:CDS |
| GTTAGGATGTTTCTTAATCC+TGG | 0.415763 | 3_1:-70485181 | Msa0372180:CDS |
| ACCTGACCTTGCAGGAGAAA+TGG | 0.419662 | 3_1:-70485554 | Msa0372180:CDS |
| ATGCTAAGCATATCCTCATA+AGG | 0.426193 | 3_1:+70485154 | None:intergenic |
| GGTTTCCAAGGAGGTGGTGG+AGG | 0.427321 | 3_1:+70483956 | None:intergenic |
| TTTGCATTTGCAAGAGACTT+TGG | 0.429572 | 3_1:-70485448 | Msa0372180:CDS |
| ACTACCTGTTGTGCTTGTTA+AGG | 0.440011 | 3_1:+70484036 | None:intergenic |
| TGTTGCTTCTAACAAGGGTT+AGG | 0.440413 | 3_1:-70485198 | Msa0372180:CDS |
| ATCCACCTCCACCACCTCCT+TGG | 0.444399 | 3_1:-70483961 | Msa0372180:CDS |
| CCTTCAAATACAGTCGTTGT+TGG | 0.444436 | 3_1:+70485577 | None:intergenic |
| CTTCAAATACAGTCGTTGTT+GGG | 0.448957 | 3_1:+70485578 | None:intergenic |
| AATACAGTCGTTGTTGGGCG+TGG | 0.450894 | 3_1:+70485583 | None:intergenic |
| AATGTCTTTAACTGGACTAA+AGG | 0.453410 | 3_1:-70485082 | Msa0372180:intron |
| CAACTCAAAACACTCAAATC+AGG | 0.456687 | 3_1:+70485244 | None:intergenic |
| AAATTCTACCTACATTTCCT+TGG | 0.457242 | 3_1:-70485314 | Msa0372180:CDS |
| ATACCATCCAGGAACACCTT+TGG | 0.461703 | 3_1:+70484855 | None:intergenic |
| CCTCTATGATGAACATGTCT+TGG | 0.462506 | 3_1:+70484265 | None:intergenic |
| ATTTCCTTAACAAGCACAAC+AGG | 0.462832 | 3_1:-70484040 | Msa0372180:CDS |
| ACCCCATTTAATGAGTTCTC+TGG | 0.464185 | 3_1:+70486083 | None:intergenic |
| TATTAACAAAATTTATGCTC+AGG | 0.465959 | 3_1:-70486019 | Msa0372180:intron |
| CTGCAATGTTGCTTCTAACA+AGG | 0.469739 | 3_1:-70485204 | Msa0372180:CDS |
| AGTACATGTGGGGTGGTGCT+TGG | 0.473838 | 3_1:-70485354 | Msa0372180:CDS |
| TGCTAAGCATATCCTCATAA+GGG | 0.477600 | 3_1:+70485155 | None:intergenic |
| CATGGTTTCCAAGGAGGTGG+TGG | 0.493242 | 3_1:+70483953 | None:intergenic |
| TTGAATAAGCAGCATCGTCT+AGG | 0.501483 | 3_1:+70485500 | None:intergenic |
| CCTGCATTTCCAGCTAAAGT+TGG | 0.502786 | 3_1:+70484079 | None:intergenic |
| CCAACAACGACTGTATTTGA+AGG | 0.513357 | 3_1:-70485577 | Msa0372180:CDS |
| GGAGAGATTGTGGTTGTCCA+TGG | 0.513687 | 3_1:+70484932 | None:intergenic |
| CCAAGACATGTTCATCATAG+AGG | 0.514706 | 3_1:-70484265 | Msa0372180:CDS |
| TGAAATTCATGTTAGGTTGG+TGG | 0.514876 | 3_1:-70485673 | Msa0372180:intron |
| ATGGGATGCAGAACTGTTGA+AGG | 0.514883 | 3_1:+70486041 | None:intergenic |
| ATTACTCATGTACTGGTGGT+TGG | 0.515779 | 3_1:-70484216 | Msa0372180:CDS |
| CCAACTTTAGCTGGAAATGC+AGG | 0.519047 | 3_1:-70484079 | Msa0372180:CDS |
| GTTAGAAGCAACATTGCAGC+AGG | 0.524873 | 3_1:+70485208 | None:intergenic |
| CATGTACTGGTGGTTGGAAG+TGG | 0.534773 | 3_1:-70484210 | Msa0372180:CDS |
| AGGCTTCATATAAAATGCCT+TGG | 0.543329 | 3_1:+70485264 | None:intergenic |
| ATTAGTTGCCAAGGAAATGT+AGG | 0.544392 | 3_1:+70485306 | None:intergenic |
| AACATTACAGGAGCAATGGT+TGG | 0.556744 | 3_1:-70484160 | Msa0372180:CDS |
| GAATGATATCATGGTTTCCA+AGG | 0.560598 | 3_1:+70483944 | None:intergenic |
| TAGGTTGGTGGATCACTGAA+TGG | 0.562722 | 3_1:-70485661 | Msa0372180:CDS |
| TTAACAAGCACAACAGGTAG+TGG | 0.568632 | 3_1:-70484034 | Msa0372180:CDS |
| GCTGATTATATGGAAGCCAA+AGG | 0.576136 | 3_1:-70484871 | Msa0372180:CDS |
| CATTGTCATAGCAAAAGACA+TGG | 0.581404 | 3_1:+70486167 | None:intergenic |
| CACATCAGGATTAGTTGCCA+AGG | 0.583526 | 3_1:+70485297 | None:intergenic |
| ACAACATATTGGAGAGATTG+TGG | 0.586233 | 3_1:+70484922 | None:intergenic |
| CTGCTGCCATTTCTCCTGCA+AGG | 0.587328 | 3_1:+70485548 | None:intergenic |
| AAGCCAAAGGTGTTCCTGGA+TGG | 0.590814 | 3_1:-70484858 | Msa0372180:CDS |
| TGCAATGTTGCTTCTAACAA+GGG | 0.591784 | 3_1:-70485203 | Msa0372180:CDS |
| CACCAGATGATCACTACTGT+TGG | 0.591909 | 3_1:-70485630 | Msa0372180:CDS |
| TATCATGGTTTCCAAGGAGG+TGG | 0.593765 | 3_1:+70483950 | None:intergenic |
| ATTACAGGAGCAATGGTTGG+AGG | 0.593896 | 3_1:-70484157 | Msa0372180:CDS |
| GGTGTTCCTGGATGGTATTG+TGG | 0.602884 | 3_1:-70484850 | Msa0372180:intron |
| TAACAACATTACAGGAGCAA+TGG | 0.606000 | 3_1:-70484164 | Msa0372180:CDS |
| ATATCCTCATAAGGGTAACC+AGG | 0.610242 | 3_1:+70485163 | None:intergenic |
| TTAGGACCACAATACCATCC+AGG | 0.617520 | 3_1:+70484844 | None:intergenic |
| AAAGTCTCTTGCAAATGCAA+AGG | 0.621930 | 3_1:+70485450 | None:intergenic |
| GTTACTTTGATGAGTACATG+TGG | 0.631061 | 3_1:-70485366 | Msa0372180:CDS |
| TACTTTGATGAGTACATGTG+GGG | 0.640760 | 3_1:-70485364 | Msa0372180:CDS |
| TGATATCATGGTTTCCAAGG+AGG | 0.640965 | 3_1:+70483947 | None:intergenic |
| TTTGATGAGTACATGTGGGG+TGG | 0.652316 | 3_1:-70485361 | Msa0372180:CDS |
| TGATGTGCCTAAGAATGCCA+AGG | 0.657170 | 3_1:-70485281 | Msa0372180:CDS |
| GCCAGAGAACTCATTAAATG+GGG | 0.671647 | 3_1:-70486084 | Msa0372180:CDS |
| ATTGTCATAGCAAAAGACAT+GGG | 0.674505 | 3_1:+70486168 | None:intergenic |
| TTACTTTGATGAGTACATGT+GGG | 0.676107 | 3_1:-70485365 | Msa0372180:CDS |
| AAAAGATCAACATACAGTCG+CGG | 0.678960 | 3_1:-70485424 | Msa0372180:CDS |
| TTGATGAAGATAAGAACACA+TGG | 0.698282 | 3_1:+70485108 | None:intergenic |
| GGGTTGATACAATTGAACCA+TGG | 0.709415 | 3_1:-70484949 | Msa0372180:CDS |
| AATGTAGGTAGAATTTCCAG+TGG | 0.715370 | 3_1:+70485321 | None:intergenic |
| TCTCCAATATGTTGTCAATG+CGG | 0.724183 | 3_1:-70484914 | Msa0372180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTGAATAAAAAAACA+AGG | + | chr3_1:70485118-70485137 | None:intergenic | 10.0% |
| !! | TTTAACATAGTTTAAATAAT+TGG | - | chr3_1:70485473-70485492 | Msa0372180:intron | 10.0% |
| !!! | ATATTTTGAATAAAAAAACA+AGG | + | chr3_1:70485118-70485137 | None:intergenic | 10.0% |
| !! | TTTAACATAGTTTAAATAAT+TGG | - | chr3_1:70485473-70485492 | Msa0372180:intron | 10.0% |
| !! | TGAATATAAACAAAAATACA+TGG | - | chr3_1:70484019-70484038 | Msa0372180:CDS | 15.0% |
| !!! | AGCATAAATTTTGTTAATAT+GGG | + | chr3_1:70484126-70484145 | None:intergenic | 15.0% |
| !! | TGAATATAAACAAAAATACA+TGG | - | chr3_1:70484019-70484038 | Msa0372180:CDS | 15.0% |
| !!! | AGCATAAATTTTGTTAATAT+GGG | + | chr3_1:70484126-70484145 | None:intergenic | 15.0% |
| !!! | GAGCATAAATTTTGTTAATA+TGG | + | chr3_1:70484127-70484146 | None:intergenic | 20.0% |
| !! | TATTAACAAAATTTATGCTC+AGG | - | chr3_1:70484127-70484146 | Msa0372180:CDS | 20.0% |
| !! | ATGAAAGTTGGAATATTTAA+GGG | + | chr3_1:70484269-70484288 | None:intergenic | 20.0% |
| !! | TATGAAAGTTGGAATATTTA+AGG | + | chr3_1:70484270-70484289 | None:intergenic | 20.0% |
| !! | TTGATATTGTATATGAAAGT+TGG | + | chr3_1:70484281-70484300 | None:intergenic | 20.0% |
| !! | AACTTTCATATACAATATCA+AGG | - | chr3_1:70484280-70484299 | Msa0372180:CDS | 20.0% |
| !! | CATTATTGAGATCATAAATT+TGG | - | chr3_1:70484431-70484450 | Msa0372180:intron | 20.0% |
| !! | TTATAAAAAGGTTCAATGTA+AGG | + | chr3_1:70484752-70484771 | None:intergenic | 20.0% |
| !! | TTATATTTCCATTAAACAGA+TGG | - | chr3_1:70485796-70485815 | Msa0372180:intron | 20.0% |
| !!! | GAGCATAAATTTTGTTAATA+TGG | + | chr3_1:70484127-70484146 | None:intergenic | 20.0% |
| !! | TATTAACAAAATTTATGCTC+AGG | - | chr3_1:70484127-70484146 | Msa0372180:CDS | 20.0% |
| !! | ATGAAAGTTGGAATATTTAA+GGG | + | chr3_1:70484269-70484288 | None:intergenic | 20.0% |
| !! | TATGAAAGTTGGAATATTTA+AGG | + | chr3_1:70484270-70484289 | None:intergenic | 20.0% |
| !! | TTGATATTGTATATGAAAGT+TGG | + | chr3_1:70484281-70484300 | None:intergenic | 20.0% |
| !! | AACTTTCATATACAATATCA+AGG | - | chr3_1:70484280-70484299 | Msa0372180:CDS | 20.0% |
| !! | CATTATTGAGATCATAAATT+TGG | - | chr3_1:70484431-70484450 | Msa0372180:intron | 20.0% |
| !! | TTATAAAAAGGTTCAATGTA+AGG | + | chr3_1:70484752-70484771 | None:intergenic | 20.0% |
| !! | TTATATTTCCATTAAACAGA+TGG | - | chr3_1:70485796-70485815 | Msa0372180:intron | 20.0% |
| !! | ATACATCTGAAATTCATGTT+AGG | - | chr3_1:70484466-70484485 | Msa0372180:intron | 25.0% |
| ! | TAACCAGTTGAGTTATAAAA+AGG | + | chr3_1:70484764-70484783 | None:intergenic | 25.0% |
| ! | ATCAATTCAATGTCTTTAAC+TGG | - | chr3_1:70485056-70485075 | Msa0372180:intron | 25.0% |
| ! | ATGTTAACATGAAAATTTGC+AGG | - | chr3_1:70485173-70485192 | Msa0372180:CDS | 25.0% |
| ! | TGTTAACATGAAAATTTGCA+GGG | - | chr3_1:70485174-70485193 | Msa0372180:CDS | 25.0% |
| !!! | TTCTCTTTTTGCTGATTATA+TGG | - | chr3_1:70485265-70485284 | Msa0372180:CDS | 25.0% |
| ! | ACAGATATTGGAAAGAAATT+AGG | + | chr3_1:70485323-70485342 | None:intergenic | 25.0% |
| ! | AATAATTGGTTAATTACGTC+TGG | - | chr3_1:70485487-70485506 | Msa0372180:intron | 25.0% |
| !! | AACTTCATTAAACAGGATTT+TGG | - | chr3_1:70485560-70485579 | Msa0372180:CDS | 25.0% |
| ! | GTTAACACAGTTTAAATAAG+TGG | + | chr3_1:70485695-70485714 | None:intergenic | 25.0% |
| !! | GAGTAATTTTTGTGATCATT+TGG | + | chr3_1:70485917-70485936 | None:intergenic | 25.0% |
| !! | TTTTCCTTGAATCATGAAAT+TGG | + | chr3_1:70486030-70486049 | None:intergenic | 25.0% |
| ! | ATGAAACTTTATATTGTCTC+TGG | + | chr3_1:70483955-70483974 | None:intergenic | 25.0% |
| !! | ATACATCTGAAATTCATGTT+AGG | - | chr3_1:70484466-70484485 | Msa0372180:intron | 25.0% |
| ! | TAACCAGTTGAGTTATAAAA+AGG | + | chr3_1:70484764-70484783 | None:intergenic | 25.0% |
| ! | ATCAATTCAATGTCTTTAAC+TGG | - | chr3_1:70485056-70485075 | Msa0372180:intron | 25.0% |
| ! | ATGTTAACATGAAAATTTGC+AGG | - | chr3_1:70485173-70485192 | Msa0372180:CDS | 25.0% |
| ! | TGTTAACATGAAAATTTGCA+GGG | - | chr3_1:70485174-70485193 | Msa0372180:CDS | 25.0% |
| !!! | TTCTCTTTTTGCTGATTATA+TGG | - | chr3_1:70485265-70485284 | Msa0372180:CDS | 25.0% |
| ! | ACAGATATTGGAAAGAAATT+AGG | + | chr3_1:70485323-70485342 | None:intergenic | 25.0% |
| ! | AATAATTGGTTAATTACGTC+TGG | - | chr3_1:70485487-70485506 | Msa0372180:intron | 25.0% |
| !! | AACTTCATTAAACAGGATTT+TGG | - | chr3_1:70485560-70485579 | Msa0372180:CDS | 25.0% |
| ! | GTTAACACAGTTTAAATAAG+TGG | + | chr3_1:70485695-70485714 | None:intergenic | 25.0% |
| !! | GAGTAATTTTTGTGATCATT+TGG | + | chr3_1:70485917-70485936 | None:intergenic | 25.0% |
| !! | TTTTCCTTGAATCATGAAAT+TGG | + | chr3_1:70486030-70486049 | None:intergenic | 25.0% |
| ATTGTCATAGCAAAAGACAT+GGG | + | chr3_1:70483981-70484000 | None:intergenic | 30.0% | |
| GTAATGGCAAAGACTAAAAT+TGG | + | chr3_1:70484348-70484367 | None:intergenic | 30.0% | |
| ATTTCAGATGTATTGCTCTT+AGG | + | chr3_1:70484459-70484478 | None:intergenic | 30.0% | |
| ! | ATCTGAAATTCATGTTAGGT+TGG | - | chr3_1:70484470-70484489 | Msa0372180:intron | 30.0% |
| TTATTCAAAGAAACTCGTCA+AGG | - | chr3_1:70484661-70484680 | Msa0372180:intron | 30.0% | |
| TATTCAAAGAAACTCGTCAA+GGG | - | chr3_1:70484662-70484681 | Msa0372180:intron | 30.0% | |
| ! | GAACCTTTTTATAACTCAAC+TGG | - | chr3_1:70484758-70484777 | Msa0372180:intron | 30.0% |
| TTACTTTGATGAGTACATGT+GGG | - | chr3_1:70484781-70484800 | Msa0372180:intron | 30.0% | |
| AAATTCTACCTACATTTCCT+TGG | - | chr3_1:70484832-70484851 | Msa0372180:intron | 30.0% | |
| !!! | TGATTTGAGTGTTTTGAGTT+GGG | - | chr3_1:70484904-70484923 | Msa0372180:CDS | 30.0% |
| TGGTAAGACTAGTAACATTA+TGG | + | chr3_1:70485021-70485040 | None:intergenic | 30.0% | |
| TTGATGAAGATAAGAACACA+TGG | + | chr3_1:70485041-70485060 | None:intergenic | 30.0% | |
| AATGTCTTTAACTGGACTAA+AGG | - | chr3_1:70485064-70485083 | Msa0372180:intron | 30.0% | |
| GTTAACATGAAAATTTGCAG+GGG | - | chr3_1:70485175-70485194 | Msa0372180:CDS | 30.0% | |
| TTAACATGAAAATTTGCAGG+GGG | - | chr3_1:70485176-70485195 | Msa0372180:CDS | 30.0% | |
| CTTTCCAATATCTGTTCTAA+AGG | - | chr3_1:70485328-70485347 | Msa0372180:CDS | 30.0% | |
| !! | AATGCCTTTAGAACAGATAT+TGG | + | chr3_1:70485335-70485354 | None:intergenic | 30.0% |
| TCGAAATGATGTGAAGAATT+TGG | + | chr3_1:70485374-70485393 | None:intergenic | 30.0% | |
| GTTTAATGAAGTTACGTTTG+TGG | + | chr3_1:70485553-70485572 | None:intergenic | 30.0% | |
| CAAACGTAACTTCATTAAAC+AGG | - | chr3_1:70485553-70485572 | Msa0372180:CDS | 30.0% | |
| !! | TAGTTAAGCACTGAGAATTA+TGG | + | chr3_1:70485588-70485607 | None:intergenic | 30.0% |
| AGTTGAACACCTGAAAATTA+TGG | - | chr3_1:70485615-70485634 | Msa0372180:CDS | 30.0% | |
| ! | AGTGGTATACCATAATTTTC+AGG | + | chr3_1:70485627-70485646 | None:intergenic | 30.0% |
| !! | ATTTGTGACAACTTTTGAAG+CGG | + | chr3_1:70485717-70485736 | None:intergenic | 30.0% |
| GATGTAATCCATCTGTTTAA+TGG | + | chr3_1:70485807-70485826 | None:intergenic | 30.0% | |
| !! | TAAACAGATGGATTACATCA+TGG | - | chr3_1:70485808-70485827 | Msa0372180:intron | 30.0% |
| !! | AAACAGATGGATTACATCAT+GGG | - | chr3_1:70485809-70485828 | Msa0372180:intron | 30.0% |
| CACAAAAATTACTCATGTAC+TGG | - | chr3_1:70485923-70485942 | Msa0372180:intron | 30.0% | |
| AAAAATTACTCATGTACTGG+TGG | - | chr3_1:70485926-70485945 | Msa0372180:intron | 30.0% | |
| CTGTAATGTTGTTAGGATTT+CGG | + | chr3_1:70485976-70485995 | None:intergenic | 30.0% | |
| TGAAATTGGTCAAAACGATT+TGG | + | chr3_1:70486016-70486035 | None:intergenic | 30.0% | |
| TTGACCAATTTCATGATTCA+AGG | - | chr3_1:70486023-70486042 | Msa0372180:CDS | 30.0% | |
| ! | TGTGCTTGTTAAGGAAATTA+AGG | + | chr3_1:70486104-70486123 | None:intergenic | 30.0% |
| ATTGTCATAGCAAAAGACAT+GGG | + | chr3_1:70483981-70484000 | None:intergenic | 30.0% | |
| GTAATGGCAAAGACTAAAAT+TGG | + | chr3_1:70484348-70484367 | None:intergenic | 30.0% | |
| ATTTCAGATGTATTGCTCTT+AGG | + | chr3_1:70484459-70484478 | None:intergenic | 30.0% | |
| ! | ATCTGAAATTCATGTTAGGT+TGG | - | chr3_1:70484470-70484489 | Msa0372180:intron | 30.0% |
| TTATTCAAAGAAACTCGTCA+AGG | - | chr3_1:70484661-70484680 | Msa0372180:intron | 30.0% | |
| TATTCAAAGAAACTCGTCAA+GGG | - | chr3_1:70484662-70484681 | Msa0372180:intron | 30.0% | |
| ! | GAACCTTTTTATAACTCAAC+TGG | - | chr3_1:70484758-70484777 | Msa0372180:intron | 30.0% |
| TTACTTTGATGAGTACATGT+GGG | - | chr3_1:70484781-70484800 | Msa0372180:intron | 30.0% | |
| AAATTCTACCTACATTTCCT+TGG | - | chr3_1:70484832-70484851 | Msa0372180:intron | 30.0% | |
| !!! | TGATTTGAGTGTTTTGAGTT+GGG | - | chr3_1:70484904-70484923 | Msa0372180:CDS | 30.0% |
| TGGTAAGACTAGTAACATTA+TGG | + | chr3_1:70485021-70485040 | None:intergenic | 30.0% | |
| TTGATGAAGATAAGAACACA+TGG | + | chr3_1:70485041-70485060 | None:intergenic | 30.0% | |
| AATGTCTTTAACTGGACTAA+AGG | - | chr3_1:70485064-70485083 | Msa0372180:intron | 30.0% | |
| GTTAACATGAAAATTTGCAG+GGG | - | chr3_1:70485175-70485194 | Msa0372180:CDS | 30.0% | |
| TTAACATGAAAATTTGCAGG+GGG | - | chr3_1:70485176-70485195 | Msa0372180:CDS | 30.0% | |
| CTTTCCAATATCTGTTCTAA+AGG | - | chr3_1:70485328-70485347 | Msa0372180:CDS | 30.0% | |
| !! | AATGCCTTTAGAACAGATAT+TGG | + | chr3_1:70485335-70485354 | None:intergenic | 30.0% |
| TCGAAATGATGTGAAGAATT+TGG | + | chr3_1:70485374-70485393 | None:intergenic | 30.0% | |
| GTTTAATGAAGTTACGTTTG+TGG | + | chr3_1:70485553-70485572 | None:intergenic | 30.0% | |
| CAAACGTAACTTCATTAAAC+AGG | - | chr3_1:70485553-70485572 | Msa0372180:CDS | 30.0% | |
| !! | TAGTTAAGCACTGAGAATTA+TGG | + | chr3_1:70485588-70485607 | None:intergenic | 30.0% |
| AGTTGAACACCTGAAAATTA+TGG | - | chr3_1:70485615-70485634 | Msa0372180:CDS | 30.0% | |
| ! | AGTGGTATACCATAATTTTC+AGG | + | chr3_1:70485627-70485646 | None:intergenic | 30.0% |
| !! | ATTTGTGACAACTTTTGAAG+CGG | + | chr3_1:70485717-70485736 | None:intergenic | 30.0% |
| GATGTAATCCATCTGTTTAA+TGG | + | chr3_1:70485807-70485826 | None:intergenic | 30.0% | |
| !! | TAAACAGATGGATTACATCA+TGG | - | chr3_1:70485808-70485827 | Msa0372180:intron | 30.0% |
| !! | AAACAGATGGATTACATCAT+GGG | - | chr3_1:70485809-70485828 | Msa0372180:intron | 30.0% |
| CACAAAAATTACTCATGTAC+TGG | - | chr3_1:70485923-70485942 | Msa0372180:intron | 30.0% | |
| AAAAATTACTCATGTACTGG+TGG | - | chr3_1:70485926-70485945 | Msa0372180:intron | 30.0% | |
| CTGTAATGTTGTTAGGATTT+CGG | + | chr3_1:70485976-70485995 | None:intergenic | 30.0% | |
| TGAAATTGGTCAAAACGATT+TGG | + | chr3_1:70486016-70486035 | None:intergenic | 30.0% | |
| TTGACCAATTTCATGATTCA+AGG | - | chr3_1:70486023-70486042 | Msa0372180:CDS | 30.0% | |
| ! | TGTGCTTGTTAAGGAAATTA+AGG | + | chr3_1:70486104-70486123 | None:intergenic | 30.0% |
| CATTGTCATAGCAAAAGACA+TGG | + | chr3_1:70483982-70484001 | None:intergenic | 35.0% | |
| TTGCTATGACAATGCTAAGT+TGG | - | chr3_1:70483988-70484007 | Msa0372180:CDS | 35.0% | |
| ATGCCAGAGAACTCATTAAA+TGG | - | chr3_1:70484060-70484079 | Msa0372180:CDS | 35.0% | |
| TGCCAGAGAACTCATTAAAT+GGG | - | chr3_1:70484061-70484080 | Msa0372180:CDS | 35.0% | |
| AATACGCGACTTCTTCAATA+GGG | + | chr3_1:70484214-70484233 | None:intergenic | 35.0% | |
| !! | TGAAATTCATGTTAGGTTGG+TGG | - | chr3_1:70484473-70484492 | Msa0372180:intron | 35.0% |
| CTTCAAATACAGTCGTTGTT+GGG | + | chr3_1:70484571-70484590 | None:intergenic | 35.0% | |
| AAAGTCTCTTGCAAATGCAA+AGG | + | chr3_1:70484699-70484718 | None:intergenic | 35.0% | |
| TTTGCATTTGCAAGAGACTT+TGG | - | chr3_1:70484698-70484717 | Msa0372180:intron | 35.0% | |
| AAAAGATCAACATACAGTCG+CGG | - | chr3_1:70484722-70484741 | Msa0372180:intron | 35.0% | |
| ! | GTTACTTTGATGAGTACATG+TGG | - | chr3_1:70484780-70484799 | Msa0372180:intron | 35.0% |
| TACTTTGATGAGTACATGTG+GGG | - | chr3_1:70484782-70484801 | Msa0372180:intron | 35.0% | |
| AATGTAGGTAGAATTTCCAG+TGG | + | chr3_1:70484828-70484847 | None:intergenic | 35.0% | |
| ATTAGTTGCCAAGGAAATGT+AGG | + | chr3_1:70484843-70484862 | None:intergenic | 35.0% | |
| TAAAATGCCTTGGCATTCTT+AGG | + | chr3_1:70484875-70484894 | None:intergenic | 35.0% | |
| AGGCTTCATATAAAATGCCT+TGG | + | chr3_1:70484885-70484904 | None:intergenic | 35.0% | |
| CAACTCAAAACACTCAAATC+AGG | + | chr3_1:70484905-70484924 | None:intergenic | 35.0% | |
| !! | CTGATTTGAGTGTTTTGAGT+TGG | - | chr3_1:70484903-70484922 | Msa0372180:CDS | 35.0% |
| ! | TGCAATGTTGCTTCTAACAA+GGG | - | chr3_1:70484943-70484962 | Msa0372180:CDS | 35.0% |
| GTTAGGATGTTTCTTAATCC+TGG | - | chr3_1:70484965-70484984 | Msa0372180:intron | 35.0% | |
| TGCTAAGCATATCCTCATAA+GGG | + | chr3_1:70484994-70485013 | None:intergenic | 35.0% | |
| ATGCTAAGCATATCCTCATA+AGG | + | chr3_1:70484995-70485014 | None:intergenic | 35.0% | |
| TAACATGAAAATTTGCAGGG+GGG | - | chr3_1:70485177-70485196 | Msa0372180:CDS | 35.0% | |
| ACAACATATTGGAGAGATTG+TGG | + | chr3_1:70485227-70485246 | None:intergenic | 35.0% | |
| TCTCCAATATGTTGTCAATG+CGG | - | chr3_1:70485232-70485251 | Msa0372180:intron | 35.0% | |
| GGTTAATTACGTCTGGTAAA+TGG | - | chr3_1:70485494-70485513 | Msa0372180:CDS | 35.0% | |
| AAATGGTCAATGGAAATACC+AGG | - | chr3_1:70485511-70485530 | Msa0372180:CDS | 35.0% | |
| ! | ATGGTATACCACTCATTTTC+AGG | - | chr3_1:70485634-70485653 | Msa0372180:CDS | 35.0% |
| ! | TGGTATACCACTCATTTTCA+GGG | - | chr3_1:70485635-70485654 | Msa0372180:CDS | 35.0% |
| ACTATGTAGCTCATGTTCAT+TGG | + | chr3_1:70485842-70485861 | None:intergenic | 35.0% | |
| ATGAACATGAGCTACATAGT+AGG | - | chr3_1:70485842-70485861 | Msa0372180:intron | 35.0% | |
| ATGAGCTACATAGTAGGATA+TGG | - | chr3_1:70485848-70485867 | Msa0372180:intron | 35.0% | |
| TGTTGTTAGGATTTCGGTTA+GGG | + | chr3_1:70485970-70485989 | None:intergenic | 35.0% | |
| ATGTTGTTAGGATTTCGGTT+AGG | + | chr3_1:70485971-70485990 | None:intergenic | 35.0% | |
| CGAAATCCTAACAACATTAC+AGG | - | chr3_1:70485974-70485993 | Msa0372180:intron | 35.0% | |
| ATTGCTCCTGTAATGTTGTT+AGG | + | chr3_1:70485983-70486002 | None:intergenic | 35.0% | |
| TAACAACATTACAGGAGCAA+TGG | - | chr3_1:70485982-70486001 | Msa0372180:intron | 35.0% | |
| TATACTGAACCAACTTTAGC+TGG | - | chr3_1:70486058-70486077 | Msa0372180:CDS | 35.0% | |
| ATTTCCTTAACAAGCACAAC+AGG | - | chr3_1:70486106-70486125 | Msa0372180:CDS | 35.0% | |
| TGGTGGAATAGCTTCAAAAA+TGG | + | chr3_1:70486152-70486171 | None:intergenic | 35.0% | |
| ! | TTTGAAGCTATTCCACCATT+TGG | - | chr3_1:70486154-70486173 | Msa0372180:CDS | 35.0% |
| CATTGTCATAGCAAAAGACA+TGG | + | chr3_1:70483982-70484001 | None:intergenic | 35.0% | |
| TTGCTATGACAATGCTAAGT+TGG | - | chr3_1:70483988-70484007 | Msa0372180:CDS | 35.0% | |
| ATGCCAGAGAACTCATTAAA+TGG | - | chr3_1:70484060-70484079 | Msa0372180:CDS | 35.0% | |
| TGCCAGAGAACTCATTAAAT+GGG | - | chr3_1:70484061-70484080 | Msa0372180:CDS | 35.0% | |
| AATACGCGACTTCTTCAATA+GGG | + | chr3_1:70484214-70484233 | None:intergenic | 35.0% | |
| !! | TGAAATTCATGTTAGGTTGG+TGG | - | chr3_1:70484473-70484492 | Msa0372180:intron | 35.0% |
| CTTCAAATACAGTCGTTGTT+GGG | + | chr3_1:70484571-70484590 | None:intergenic | 35.0% | |
| AAAGTCTCTTGCAAATGCAA+AGG | + | chr3_1:70484699-70484718 | None:intergenic | 35.0% | |
| TTTGCATTTGCAAGAGACTT+TGG | - | chr3_1:70484698-70484717 | Msa0372180:intron | 35.0% | |
| AAAAGATCAACATACAGTCG+CGG | - | chr3_1:70484722-70484741 | Msa0372180:intron | 35.0% | |
| ! | GTTACTTTGATGAGTACATG+TGG | - | chr3_1:70484780-70484799 | Msa0372180:intron | 35.0% |
| TACTTTGATGAGTACATGTG+GGG | - | chr3_1:70484782-70484801 | Msa0372180:intron | 35.0% | |
| AATGTAGGTAGAATTTCCAG+TGG | + | chr3_1:70484828-70484847 | None:intergenic | 35.0% | |
| ATTAGTTGCCAAGGAAATGT+AGG | + | chr3_1:70484843-70484862 | None:intergenic | 35.0% | |
| TAAAATGCCTTGGCATTCTT+AGG | + | chr3_1:70484875-70484894 | None:intergenic | 35.0% | |
| AGGCTTCATATAAAATGCCT+TGG | + | chr3_1:70484885-70484904 | None:intergenic | 35.0% | |
| CAACTCAAAACACTCAAATC+AGG | + | chr3_1:70484905-70484924 | None:intergenic | 35.0% | |
| !! | CTGATTTGAGTGTTTTGAGT+TGG | - | chr3_1:70484903-70484922 | Msa0372180:CDS | 35.0% |
| ! | TGCAATGTTGCTTCTAACAA+GGG | - | chr3_1:70484943-70484962 | Msa0372180:CDS | 35.0% |
| GTTAGGATGTTTCTTAATCC+TGG | - | chr3_1:70484965-70484984 | Msa0372180:intron | 35.0% | |
| TGCTAAGCATATCCTCATAA+GGG | + | chr3_1:70484994-70485013 | None:intergenic | 35.0% | |
| ATGCTAAGCATATCCTCATA+AGG | + | chr3_1:70484995-70485014 | None:intergenic | 35.0% | |
| TAACATGAAAATTTGCAGGG+GGG | - | chr3_1:70485177-70485196 | Msa0372180:CDS | 35.0% | |
| ACAACATATTGGAGAGATTG+TGG | + | chr3_1:70485227-70485246 | None:intergenic | 35.0% | |
| TCTCCAATATGTTGTCAATG+CGG | - | chr3_1:70485232-70485251 | Msa0372180:intron | 35.0% | |
| GGTTAATTACGTCTGGTAAA+TGG | - | chr3_1:70485494-70485513 | Msa0372180:CDS | 35.0% | |
| AAATGGTCAATGGAAATACC+AGG | - | chr3_1:70485511-70485530 | Msa0372180:CDS | 35.0% | |
| ! | ATGGTATACCACTCATTTTC+AGG | - | chr3_1:70485634-70485653 | Msa0372180:CDS | 35.0% |
| ! | TGGTATACCACTCATTTTCA+GGG | - | chr3_1:70485635-70485654 | Msa0372180:CDS | 35.0% |
| ACTATGTAGCTCATGTTCAT+TGG | + | chr3_1:70485842-70485861 | None:intergenic | 35.0% | |
| ATGAACATGAGCTACATAGT+AGG | - | chr3_1:70485842-70485861 | Msa0372180:intron | 35.0% | |
| ATGAGCTACATAGTAGGATA+TGG | - | chr3_1:70485848-70485867 | Msa0372180:intron | 35.0% | |
| TGTTGTTAGGATTTCGGTTA+GGG | + | chr3_1:70485970-70485989 | None:intergenic | 35.0% | |
| ATGTTGTTAGGATTTCGGTT+AGG | + | chr3_1:70485971-70485990 | None:intergenic | 35.0% | |
| CGAAATCCTAACAACATTAC+AGG | - | chr3_1:70485974-70485993 | Msa0372180:intron | 35.0% | |
| ATTGCTCCTGTAATGTTGTT+AGG | + | chr3_1:70485983-70486002 | None:intergenic | 35.0% | |
| TAACAACATTACAGGAGCAA+TGG | - | chr3_1:70485982-70486001 | Msa0372180:intron | 35.0% | |
| TATACTGAACCAACTTTAGC+TGG | - | chr3_1:70486058-70486077 | Msa0372180:CDS | 35.0% | |
| ATTTCCTTAACAAGCACAAC+AGG | - | chr3_1:70486106-70486125 | Msa0372180:CDS | 35.0% | |
| TGGTGGAATAGCTTCAAAAA+TGG | + | chr3_1:70486152-70486171 | None:intergenic | 35.0% | |
| ! | TTTGAAGCTATTCCACCATT+TGG | - | chr3_1:70486154-70486173 | Msa0372180:CDS | 35.0% |
| GCCAGAGAACTCATTAAATG+GGG | - | chr3_1:70484062-70484081 | Msa0372180:CDS | 40.0% | |
| ACCCCATTTAATGAGTTCTC+TGG | + | chr3_1:70484066-70484085 | None:intergenic | 40.0% | |
| GAATACGCGACTTCTTCAAT+AGG | + | chr3_1:70484215-70484234 | None:intergenic | 40.0% | |
| GACAGATGTCACTGTAGTAA+TGG | + | chr3_1:70484364-70484383 | None:intergenic | 40.0% | |
| CCTTCAAATACAGTCGTTGT+TGG | + | chr3_1:70484572-70484591 | None:intergenic | 40.0% | |
| CCAACAACGACTGTATTTGA+AGG | - | chr3_1:70484569-70484588 | Msa0372180:intron | 40.0% | |
| TTGAATAAGCAGCATCGTCT+AGG | + | chr3_1:70484649-70484668 | None:intergenic | 40.0% | |
| ! | CTGCAATGTTGCTTCTAACA+AGG | - | chr3_1:70484942-70484961 | Msa0372180:CDS | 40.0% |
| ! | TGTTGCTTCTAACAAGGGTT+AGG | - | chr3_1:70484948-70484967 | Msa0372180:CDS | 40.0% |
| TAATCCTGGTTACCCTTATG+AGG | - | chr3_1:70484979-70484998 | Msa0372180:intron | 40.0% | |
| ATATCCTCATAAGGGTAACC+AGG | + | chr3_1:70484986-70485005 | None:intergenic | 40.0% | |
| !! | GGGTTGATACAATTGAACCA+TGG | - | chr3_1:70485197-70485216 | Msa0372180:CDS | 40.0% |
| ! | ATGCCGCATTGACAACATAT+TGG | + | chr3_1:70485238-70485257 | None:intergenic | 40.0% |
| ! | TGTTGTCAATGCGGCATTTT+TGG | - | chr3_1:70485241-70485260 | Msa0372180:intron | 40.0% |
| GCTGATTATATGGAAGCCAA+AGG | - | chr3_1:70485275-70485294 | Msa0372180:CDS | 40.0% | |
| TGAAGAATTTGGTACCTGAG+AGG | + | chr3_1:70485363-70485382 | None:intergenic | 40.0% | |
| TACGTCTGGTAAATGGTCAA+TGG | - | chr3_1:70485501-70485520 | Msa0372180:CDS | 40.0% | |
| GGTTAATGAGTTTCAACACC+TGG | + | chr3_1:70485532-70485551 | None:intergenic | 40.0% | |
| ! | GGTATACCACTCATTTTCAG+GGG | - | chr3_1:70485636-70485655 | Msa0372180:CDS | 40.0% |
| AGTATACCCCTGAAAATGAG+TGG | + | chr3_1:70485645-70485664 | None:intergenic | 40.0% | |
| CCTCTATGATGAACATGTCT+TGG | + | chr3_1:70485884-70485903 | None:intergenic | 40.0% | |
| CCAAGACATGTTCATCATAG+AGG | - | chr3_1:70485881-70485900 | Msa0372180:intron | 40.0% | |
| ! | ATTACTCATGTACTGGTGGT+TGG | - | chr3_1:70485930-70485949 | Msa0372180:intron | 40.0% |
| AACATTACAGGAGCAATGGT+TGG | - | chr3_1:70485986-70486005 | Msa0372180:intron | 40.0% | |
| ! | ACTACCTGTTGTGCTTGTTA+AGG | + | chr3_1:70486113-70486132 | None:intergenic | 40.0% |
| TTAACAAGCACAACAGGTAG+TGG | - | chr3_1:70486112-70486131 | Msa0372180:CDS | 40.0% | |
| GCCAGAGAACTCATTAAATG+GGG | - | chr3_1:70484062-70484081 | Msa0372180:CDS | 40.0% | |
| ACCCCATTTAATGAGTTCTC+TGG | + | chr3_1:70484066-70484085 | None:intergenic | 40.0% | |
| GAATACGCGACTTCTTCAAT+AGG | + | chr3_1:70484215-70484234 | None:intergenic | 40.0% | |
| GACAGATGTCACTGTAGTAA+TGG | + | chr3_1:70484364-70484383 | None:intergenic | 40.0% | |
| CCTTCAAATACAGTCGTTGT+TGG | + | chr3_1:70484572-70484591 | None:intergenic | 40.0% | |
| CCAACAACGACTGTATTTGA+AGG | - | chr3_1:70484569-70484588 | Msa0372180:intron | 40.0% | |
| TTGAATAAGCAGCATCGTCT+AGG | + | chr3_1:70484649-70484668 | None:intergenic | 40.0% | |
| ! | CTGCAATGTTGCTTCTAACA+AGG | - | chr3_1:70484942-70484961 | Msa0372180:CDS | 40.0% |
| ! | TGTTGCTTCTAACAAGGGTT+AGG | - | chr3_1:70484948-70484967 | Msa0372180:CDS | 40.0% |
| TAATCCTGGTTACCCTTATG+AGG | - | chr3_1:70484979-70484998 | Msa0372180:intron | 40.0% | |
| ATATCCTCATAAGGGTAACC+AGG | + | chr3_1:70484986-70485005 | None:intergenic | 40.0% | |
| !! | GGGTTGATACAATTGAACCA+TGG | - | chr3_1:70485197-70485216 | Msa0372180:CDS | 40.0% |
| ! | ATGCCGCATTGACAACATAT+TGG | + | chr3_1:70485238-70485257 | None:intergenic | 40.0% |
| ! | TGTTGTCAATGCGGCATTTT+TGG | - | chr3_1:70485241-70485260 | Msa0372180:intron | 40.0% |
| GCTGATTATATGGAAGCCAA+AGG | - | chr3_1:70485275-70485294 | Msa0372180:CDS | 40.0% | |
| TGAAGAATTTGGTACCTGAG+AGG | + | chr3_1:70485363-70485382 | None:intergenic | 40.0% | |
| TACGTCTGGTAAATGGTCAA+TGG | - | chr3_1:70485501-70485520 | Msa0372180:CDS | 40.0% | |
| GGTTAATGAGTTTCAACACC+TGG | + | chr3_1:70485532-70485551 | None:intergenic | 40.0% | |
| ! | GGTATACCACTCATTTTCAG+GGG | - | chr3_1:70485636-70485655 | Msa0372180:CDS | 40.0% |
| AGTATACCCCTGAAAATGAG+TGG | + | chr3_1:70485645-70485664 | None:intergenic | 40.0% | |
| CCTCTATGATGAACATGTCT+TGG | + | chr3_1:70485884-70485903 | None:intergenic | 40.0% | |
| CCAAGACATGTTCATCATAG+AGG | - | chr3_1:70485881-70485900 | Msa0372180:intron | 40.0% | |
| ! | ATTACTCATGTACTGGTGGT+TGG | - | chr3_1:70485930-70485949 | Msa0372180:intron | 40.0% |
| AACATTACAGGAGCAATGGT+TGG | - | chr3_1:70485986-70486005 | Msa0372180:intron | 40.0% | |
| ! | ACTACCTGTTGTGCTTGTTA+AGG | + | chr3_1:70486113-70486132 | None:intergenic | 40.0% |
| TTAACAAGCACAACAGGTAG+TGG | - | chr3_1:70486112-70486131 | Msa0372180:CDS | 40.0% | |
| ATGGGATGCAGAACTGTTGA+AGG | + | chr3_1:70484108-70484127 | None:intergenic | 45.0% | |
| !! | TAGGTTGGTGGATCACTGAA+TGG | - | chr3_1:70484485-70484504 | Msa0372180:intron | 45.0% |
| GTGGATCACTGAATGGTTCT+AGG | - | chr3_1:70484492-70484511 | Msa0372180:intron | 45.0% | |
| CACCAGATGATCACTACTGT+TGG | - | chr3_1:70484516-70484535 | Msa0372180:intron | 45.0% | |
| TGCCAACAGTAGTGATCATC+TGG | + | chr3_1:70484521-70484540 | None:intergenic | 45.0% | |
| TTTGATGAGTACATGTGGGG+TGG | - | chr3_1:70484785-70484804 | Msa0372180:intron | 45.0% | |
| ! | GCTTGGTTGTATTTTGCCAC+TGG | - | chr3_1:70484809-70484828 | Msa0372180:intron | 45.0% |
| !! | CACATCAGGATTAGTTGCCA+AGG | + | chr3_1:70484852-70484871 | None:intergenic | 45.0% |
| TTGGCATTCTTAGGCACATC+AGG | + | chr3_1:70484866-70484885 | None:intergenic | 45.0% | |
| TGATGTGCCTAAGAATGCCA+AGG | - | chr3_1:70484865-70484884 | Msa0372180:CDS | 45.0% | |
| GTTAGAAGCAACATTGCAGC+AGG | + | chr3_1:70484941-70484960 | None:intergenic | 45.0% | |
| ATACCATCCAGGAACACCTT+TGG | + | chr3_1:70485294-70485313 | None:intergenic | 45.0% | |
| TTAGGACCACAATACCATCC+AGG | + | chr3_1:70485305-70485324 | None:intergenic | 45.0% | |
| !! | AAAGGCATTTGCAACCTCTC+AGG | - | chr3_1:70485346-70485365 | Msa0372180:CDS | 45.0% |
| ATTACAGGAGCAATGGTTGG+AGG | - | chr3_1:70485989-70486008 | Msa0372180:intron | 45.0% | |
| CCTGCATTTCCAGCTAAAGT+TGG | + | chr3_1:70486070-70486089 | None:intergenic | 45.0% | |
| CCAACTTTAGCTGGAAATGC+AGG | - | chr3_1:70486067-70486086 | Msa0372180:CDS | 45.0% | |
| !! | GGATTTTCTGGTCCAAATGG+TGG | + | chr3_1:70486169-70486188 | None:intergenic | 45.0% |
| !! | GGTGGATTTTCTGGTCCAAA+TGG | + | chr3_1:70486172-70486191 | None:intergenic | 45.0% |
| ATGGGATGCAGAACTGTTGA+AGG | + | chr3_1:70484108-70484127 | None:intergenic | 45.0% | |
| !! | TAGGTTGGTGGATCACTGAA+TGG | - | chr3_1:70484485-70484504 | Msa0372180:intron | 45.0% |
| GTGGATCACTGAATGGTTCT+AGG | - | chr3_1:70484492-70484511 | Msa0372180:intron | 45.0% | |
| CACCAGATGATCACTACTGT+TGG | - | chr3_1:70484516-70484535 | Msa0372180:intron | 45.0% | |
| TGCCAACAGTAGTGATCATC+TGG | + | chr3_1:70484521-70484540 | None:intergenic | 45.0% | |
| TTTGATGAGTACATGTGGGG+TGG | - | chr3_1:70484785-70484804 | Msa0372180:intron | 45.0% | |
| ! | GCTTGGTTGTATTTTGCCAC+TGG | - | chr3_1:70484809-70484828 | Msa0372180:intron | 45.0% |
| !! | CACATCAGGATTAGTTGCCA+AGG | + | chr3_1:70484852-70484871 | None:intergenic | 45.0% |
| TTGGCATTCTTAGGCACATC+AGG | + | chr3_1:70484866-70484885 | None:intergenic | 45.0% | |
| TGATGTGCCTAAGAATGCCA+AGG | - | chr3_1:70484865-70484884 | Msa0372180:CDS | 45.0% | |
| GTTAGAAGCAACATTGCAGC+AGG | + | chr3_1:70484941-70484960 | None:intergenic | 45.0% | |
| ATACCATCCAGGAACACCTT+TGG | + | chr3_1:70485294-70485313 | None:intergenic | 45.0% | |
| TTAGGACCACAATACCATCC+AGG | + | chr3_1:70485305-70485324 | None:intergenic | 45.0% | |
| !! | AAAGGCATTTGCAACCTCTC+AGG | - | chr3_1:70485346-70485365 | Msa0372180:CDS | 45.0% |
| ATTACAGGAGCAATGGTTGG+AGG | - | chr3_1:70485989-70486008 | Msa0372180:intron | 45.0% | |
| CCTGCATTTCCAGCTAAAGT+TGG | + | chr3_1:70486070-70486089 | None:intergenic | 45.0% | |
| CCAACTTTAGCTGGAAATGC+AGG | - | chr3_1:70486067-70486086 | Msa0372180:CDS | 45.0% | |
| !! | GGATTTTCTGGTCCAAATGG+TGG | + | chr3_1:70486169-70486188 | None:intergenic | 45.0% |
| !! | GGTGGATTTTCTGGTCCAAA+TGG | + | chr3_1:70486172-70486191 | None:intergenic | 45.0% |
| CGTGGATAGCTCATGTCTTC+TGG | + | chr3_1:70484548-70484567 | None:intergenic | 50.0% | |
| AATACAGTCGTTGTTGGGCG+TGG | + | chr3_1:70484566-70484585 | None:intergenic | 50.0% | |
| TTTGAAGGACCTGACCTTGC+AGG | - | chr3_1:70484584-70484603 | Msa0372180:intron | 50.0% | |
| ACCTGACCTTGCAGGAGAAA+TGG | - | chr3_1:70484592-70484611 | Msa0372180:intron | 50.0% | |
| GGAGAGATTGTGGTTGTCCA+TGG | + | chr3_1:70485217-70485236 | None:intergenic | 50.0% | |
| !! | ATGGAAGCCAAAGGTGTTCC+TGG | - | chr3_1:70485284-70485303 | Msa0372180:CDS | 50.0% |
| !! | AAGCCAAAGGTGTTCCTGGA+TGG | - | chr3_1:70485288-70485307 | Msa0372180:CDS | 50.0% |
| GGTGTTCCTGGATGGTATTG+TGG | - | chr3_1:70485296-70485315 | Msa0372180:CDS | 50.0% | |
| ! | CATGTACTGGTGGTTGGAAG+TGG | - | chr3_1:70485936-70485955 | Msa0372180:intron | 50.0% |
| CGTGGATAGCTCATGTCTTC+TGG | + | chr3_1:70484548-70484567 | None:intergenic | 50.0% | |
| AATACAGTCGTTGTTGGGCG+TGG | + | chr3_1:70484566-70484585 | None:intergenic | 50.0% | |
| TTTGAAGGACCTGACCTTGC+AGG | - | chr3_1:70484584-70484603 | Msa0372180:intron | 50.0% | |
| ACCTGACCTTGCAGGAGAAA+TGG | - | chr3_1:70484592-70484611 | Msa0372180:intron | 50.0% | |
| GGAGAGATTGTGGTTGTCCA+TGG | + | chr3_1:70485217-70485236 | None:intergenic | 50.0% | |
| !! | ATGGAAGCCAAAGGTGTTCC+TGG | - | chr3_1:70485284-70485303 | Msa0372180:CDS | 50.0% |
| !! | AAGCCAAAGGTGTTCCTGGA+TGG | - | chr3_1:70485288-70485307 | Msa0372180:CDS | 50.0% |
| GGTGTTCCTGGATGGTATTG+TGG | - | chr3_1:70485296-70485315 | Msa0372180:CDS | 50.0% | |
| ! | CATGTACTGGTGGTTGGAAG+TGG | - | chr3_1:70485936-70485955 | Msa0372180:intron | 50.0% |
| GCCATTTCTCCTGCAAGGTC+AGG | + | chr3_1:70484596-70484615 | None:intergenic | 55.0% | |
| ! | CTGCTGCCATTTCTCCTGCA+AGG | + | chr3_1:70484601-70484620 | None:intergenic | 55.0% |
| AGTACATGTGGGGTGGTGCT+TGG | - | chr3_1:70484792-70484811 | Msa0372180:intron | 55.0% | |
| !!! | GGTGGTGGAGGTGGATTTTC+TGG | + | chr3_1:70486181-70486200 | None:intergenic | 55.0% |
| GCCATTTCTCCTGCAAGGTC+AGG | + | chr3_1:70484596-70484615 | None:intergenic | 55.0% | |
| ! | CTGCTGCCATTTCTCCTGCA+AGG | + | chr3_1:70484601-70484620 | None:intergenic | 55.0% |
| AGTACATGTGGGGTGGTGCT+TGG | - | chr3_1:70484792-70484811 | Msa0372180:intron | 55.0% | |
| !!! | GGTGGTGGAGGTGGATTTTC+TGG | + | chr3_1:70486181-70486200 | None:intergenic | 55.0% |
| ATCCACCTCCACCACCTCCT+TGG | - | chr3_1:70486185-70486204 | Msa0372180:exon | 60.0% | |
| !! | TTCCAAGGAGGTGGTGGAGG+TGG | + | chr3_1:70486190-70486209 | None:intergenic | 60.0% |
| ! | GGTTTCCAAGGAGGTGGTGG+AGG | + | chr3_1:70486193-70486212 | None:intergenic | 60.0% |
| ATCCACCTCCACCACCTCCT+TGG | - | chr3_1:70486185-70486204 | Msa0372180:exon | 60.0% | |
| !! | TTCCAAGGAGGTGGTGGAGG+TGG | + | chr3_1:70486190-70486209 | None:intergenic | 60.0% |
| ! | GGTTTCCAAGGAGGTGGTGG+AGG | + | chr3_1:70486193-70486212 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 70483955 | 70486213 | 70483955 | ID=Msa0372180;Name=Msa0372180 |
| chr3_1 | mRNA | 70483955 | 70486213 | 70483955 | ID=Msa0372180-mRNA-1;Parent=Msa0372180;Name=Msa0372180-mRNA-1;_AED=0.12;_eAED=0.14;_QI=26|0|0|1|0.4|0.16|6|0|404 |
| chr3_1 | exon | 70486020 | 70486213 | 70486020 | ID=Msa0372180-mRNA-1:exon:15370;Parent=Msa0372180-mRNA-1 |
| chr3_1 | exon | 70485492 | 70485680 | 70485492 | ID=Msa0372180-mRNA-1:exon:15369;Parent=Msa0372180-mRNA-1 |
| chr3_1 | exon | 70485255 | 70485485 | 70485255 | ID=Msa0372180-mRNA-1:exon:15368;Parent=Msa0372180-mRNA-1 |
| chr3_1 | exon | 70485083 | 70485233 | 70485083 | ID=Msa0372180-mRNA-1:exon:15367;Parent=Msa0372180-mRNA-1 |
| chr3_1 | exon | 70484851 | 70484973 | 70484851 | ID=Msa0372180-mRNA-1:exon:15366;Parent=Msa0372180-mRNA-1 |
| chr3_1 | exon | 70483955 | 70484304 | 70483955 | ID=Msa0372180-mRNA-1:exon:15365;Parent=Msa0372180-mRNA-1 |
| chr3_1 | five_prime_UTR | 70486188 | 70486213 | 70486188 | ID=Msa0372180-mRNA-1:five_prime_utr;Parent=Msa0372180-mRNA-1 |
| chr3_1 | CDS | 70486020 | 70486187 | 70486020 | ID=Msa0372180-mRNA-1:cds;Parent=Msa0372180-mRNA-1 |
| chr3_1 | CDS | 70485492 | 70485680 | 70485492 | ID=Msa0372180-mRNA-1:cds;Parent=Msa0372180-mRNA-1 |
| chr3_1 | CDS | 70485255 | 70485485 | 70485255 | ID=Msa0372180-mRNA-1:cds;Parent=Msa0372180-mRNA-1 |
| chr3_1 | CDS | 70485083 | 70485233 | 70485083 | ID=Msa0372180-mRNA-1:cds;Parent=Msa0372180-mRNA-1 |
| chr3_1 | CDS | 70484851 | 70484973 | 70484851 | ID=Msa0372180-mRNA-1:cds;Parent=Msa0372180-mRNA-1 |
| chr3_1 | CDS | 70483955 | 70484304 | 70483955 | ID=Msa0372180-mRNA-1:cds;Parent=Msa0372180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
