Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0438520 | XP_003601506.1 | 95.591 | 635 | 17 | 1 | 1 | 635 | 1 | 624 | 0.0 | 1261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0438520 | sp|O04478|GUN7_ARATH | 59.561 | 638 | 240 | 6 | 1 | 635 | 1 | 623 | 0.0 | 760 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0438520 | G7J8S6 | 95.591 | 635 | 17 | 1 | 1 | 635 | 1 | 624 | 0.0 | 1261 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011010 | Msa0438520 | 0.802440 | 5.604826e-49 | -8.615850e-47 |
| Msa0011040 | Msa0438520 | 0.816518 | 5.305873e-52 | -8.615850e-47 |
| Msa0014280 | Msa0438520 | 0.808948 | 2.409412e-50 | -8.615850e-47 |
| Msa0046680 | Msa0438520 | 0.803203 | 3.899584e-49 | -8.615850e-47 |
| Msa0048380 | Msa0438520 | 0.819646 | 1.041393e-52 | -8.615850e-47 |
| Msa0051910 | Msa0438520 | 0.824866 | 6.398946e-54 | -8.615850e-47 |
| Msa0072940 | Msa0438520 | 0.804590 | 2.008153e-49 | -8.615850e-47 |
| Msa0087900 | Msa0438520 | 0.803504 | 3.378591e-49 | -8.615850e-47 |
| Msa0095910 | Msa0438520 | 0.800008 | 1.763059e-48 | -8.615850e-47 |
| Msa0107830 | Msa0438520 | 0.846994 | 1.530653e-59 | -8.615850e-47 |
| Msa0111780 | Msa0438520 | 0.822529 | 2.256714e-53 | -8.615850e-47 |
| Msa0125860 | Msa0438520 | 0.813333 | 2.699695e-51 | -8.615850e-47 |
| Msa0129290 | Msa0438520 | 0.861213 | 1.201685e-63 | -8.615850e-47 |
| Msa0143640 | Msa0438520 | 0.817462 | 3.256799e-52 | -8.615850e-47 |
| Msa0143830 | Msa0438520 | 0.822502 | 2.288541e-53 | -8.615850e-47 |
| Msa0150640 | Msa0438520 | 0.804798 | 1.816684e-49 | -8.615850e-47 |
| Msa0150910 | Msa0438520 | 0.802632 | 5.115322e-49 | -8.615850e-47 |
| Msa0155850 | Msa0438520 | 0.807498 | 4.909009e-50 | -8.615850e-47 |
| Msa0186240 | Msa0438520 | 0.811438 | 7.000410e-51 | -8.615850e-47 |
| Msa0200090 | Msa0438520 | 0.828375 | 9.312012e-55 | -8.615850e-47 |
| Msa0207640 | Msa0438520 | 0.809392 | 1.935208e-50 | -8.615850e-47 |
| Msa0207930 | Msa0438520 | 0.801307 | 9.578045e-49 | -8.615850e-47 |
| Msa0207970 | Msa0438520 | 0.816405 | 5.623577e-52 | -8.615850e-47 |
| Msa0210790 | Msa0438520 | 0.802247 | 6.142844e-49 | -8.615850e-47 |
| Msa0238330 | Msa0438520 | 0.804076 | 2.569515e-49 | -8.615850e-47 |
| Msa0372180 | Msa0438520 | 0.824614 | 7.338292e-54 | -8.615850e-47 |
| Msa0374040 | Msa0438520 | 0.805483 | 1.306062e-49 | -8.615850e-47 |
| Msa0378320 | Msa0438520 | 0.802793 | 4.739871e-49 | -8.615850e-47 |
| Msa0390200 | Msa0438520 | 0.844322 | 8.125098e-59 | -8.615850e-47 |
| Msa0397190 | Msa0438520 | 0.800096 | 1.691618e-48 | -8.615850e-47 |
| Msa0398770 | Msa0438520 | 0.800691 | 1.279681e-48 | -8.615850e-47 |
| Msa0414480 | Msa0438520 | 0.801847 | 7.421076e-49 | -8.615850e-47 |
| Msa0420890 | Msa0438520 | 0.948329 | 1.172079e-106 | -8.615850e-47 |
| Msa0421080 | Msa0438520 | 0.807703 | 4.439560e-50 | -8.615850e-47 |
| Msa0427660 | Msa0438520 | 0.809052 | 2.289797e-50 | -8.615850e-47 |
| Msa0438520 | Msa0447160 | 0.801218 | 9.987072e-49 | -8.615850e-47 |
| Msa0438520 | Msa0459930 | 0.809149 | 2.181904e-50 | -8.615850e-47 |
| Msa0438520 | Msa0464310 | 0.828292 | 9.746911e-55 | -8.615850e-47 |
| Msa0438520 | Msa0466850 | 0.803291 | 3.739774e-49 | -8.615850e-47 |
| Msa0438520 | Msa0478080 | 0.817620 | 2.999901e-52 | -8.615850e-47 |
| Msa0438520 | Msa0480540 | 0.824311 | 8.645805e-54 | -8.615850e-47 |
| Msa0438520 | Msa0480550 | 0.829091 | 6.247826e-55 | -8.615850e-47 |
| Msa0438520 | Msa0489370 | 0.820716 | 5.920037e-53 | -8.615850e-47 |
| Msa0438520 | Msa0490100 | 0.811596 | 6.468293e-51 | -8.615850e-47 |
| Msa0438520 | Msa0493870 | 0.810307 | 1.230333e-50 | -8.615850e-47 |
| Msa0438520 | Msa0497680 | 0.815482 | 9.038272e-52 | -8.615850e-47 |
| Msa0438520 | Msa0497690 | 0.802342 | 5.872706e-49 | -8.615850e-47 |
| Msa0438520 | Msa0500440 | 0.816311 | 5.904953e-52 | -8.615850e-47 |
| Msa0438520 | Msa0510870 | 0.823280 | 1.508349e-53 | -8.615850e-47 |
| Msa0438520 | Msa0512280 | 0.870888 | 1.038074e-66 | -8.615850e-47 |
| Msa0438520 | Msa0513670 | 0.805028 | 1.627009e-49 | -8.615850e-47 |
| Msa0438520 | Msa0518490 | 0.812625 | 3.858454e-51 | -8.615850e-47 |
| Msa0438520 | Msa0522140 | 0.802386 | 5.751407e-49 | -8.615850e-47 |
| Msa0438520 | Msa0522170 | 0.811183 | 7.951064e-51 | -8.615850e-47 |
| Msa0438520 | Msa0535570 | 0.817277 | 3.584978e-52 | -8.615850e-47 |
| Msa0438520 | Msa0538440 | 0.800367 | 1.490119e-48 | -8.615850e-47 |
| Msa0438520 | Msa0538450 | 0.816612 | 5.056362e-52 | -8.615850e-47 |
| Msa0438520 | Msa0538520 | 0.814563 | 1.445421e-51 | -8.615850e-47 |
| Msa0438520 | Msa0548790 | 0.815928 | 7.188467e-52 | -8.615850e-47 |
| Msa0438520 | Msa0549170 | 0.800991 | 1.111671e-48 | -8.615850e-47 |
| Msa0438520 | Msa0554660 | 0.812954 | 3.268588e-51 | -8.615850e-47 |
| Msa0438520 | Msa0557240 | 0.823575 | 1.286386e-53 | -8.615850e-47 |
| Msa0438520 | Msa0561110 | 0.802513 | 5.412808e-49 | -8.615850e-47 |
| Msa0438520 | Msa0561830 | 0.843551 | 1.306746e-58 | -8.615850e-47 |
| Msa0438520 | Msa0572700 | 0.811601 | 6.453961e-51 | -8.615850e-47 |
| Msa0438520 | Msa0580840 | 0.817211 | 3.709849e-52 | -8.615850e-47 |
| Msa0438520 | Msa0588040 | 0.804250 | 2.364364e-49 | -8.615850e-47 |
| Msa0438520 | Msa0588730 | 0.807121 | 5.899104e-50 | -8.615850e-47 |
| Msa0438520 | Msa0597170 | 0.825749 | 3.956206e-54 | -8.615850e-47 |
| Msa0438520 | Msa0597800 | 0.800106 | 1.684174e-48 | -8.615850e-47 |
| Msa0438520 | Msa0597820 | 0.822208 | 2.679170e-53 | -8.615850e-47 |
| Msa0438520 | Msa0604280 | 0.812166 | 4.859799e-51 | -8.615850e-47 |
| Msa0438520 | Msa0614960 | 0.859262 | 4.670822e-63 | -8.615850e-47 |
| Msa0438520 | Msa0628200 | 0.800562 | 1.359675e-48 | -8.615850e-47 |
| Msa0438520 | Msa0629030 | 0.800770 | 1.233254e-48 | -8.615850e-47 |
| Msa0438520 | Msa0629040 | 0.823028 | 1.726334e-53 | -8.615850e-47 |
| Msa0438520 | Msa0629140 | 0.804309 | 2.298127e-49 | -8.615850e-47 |
| Msa0438520 | Msa0631700 | 0.806473 | 8.085587e-50 | -8.615850e-47 |
| Msa0438520 | Msa0639410 | 0.800518 | 1.388400e-48 | -8.615850e-47 |
| Msa0438520 | Msa0641700 | 0.801424 | 9.062653e-49 | -8.615850e-47 |
| Msa0438520 | Msa0651820 | 0.826358 | 2.834787e-54 | -8.615850e-47 |
| Msa0438520 | Msa0652590 | 0.851917 | 6.495091e-61 | -8.615850e-47 |
| Msa0438520 | Msa0652600 | 0.803981 | 2.689201e-49 | -8.615850e-47 |
| Msa0438520 | Msa0652610 | 0.811623 | 6.380951e-51 | -8.615850e-47 |
| Msa0438520 | Msa0655370 | 0.843628 | 1.246791e-58 | -8.615850e-47 |
| Msa0438520 | Msa0657260 | 0.802071 | 6.674665e-49 | -8.615850e-47 |
| Msa0438520 | Msa0661330 | 0.800275 | 1.555419e-48 | -8.615850e-47 |
| Msa0438520 | Msa0666580 | 0.807647 | 4.564063e-50 | -8.615850e-47 |
| Msa0438520 | Msa0670360 | 0.806876 | 6.647868e-50 | -8.615850e-47 |
| Msa0438520 | Msa0671640 | 0.801553 | 8.528698e-49 | -8.615850e-47 |
| Msa0438520 | Msa0675590 | 0.817235 | 3.663048e-52 | -8.615850e-47 |
| Msa0438520 | Msa0675620 | 0.823676 | 1.218237e-53 | -8.615850e-47 |
| Msa0438520 | Msa0680460 | 0.812346 | 4.441166e-51 | -8.615850e-47 |
| Msa0438520 | Msa0685080 | 0.807653 | 4.550078e-50 | -8.615850e-47 |
| Msa0438520 | Msa0689840 | 0.800127 | 1.667389e-48 | -8.615850e-47 |
| Msa0438520 | Msa0694320 | 0.813495 | 2.487338e-51 | -8.615850e-47 |
| Msa0438520 | Msa0699170 | 0.859460 | 4.074228e-63 | -8.615850e-47 |
| Msa0438520 | Msa0711240 | 0.814016 | 1.909574e-51 | -8.615850e-47 |
| Msa0438520 | Msa0715210 | 0.802235 | 6.177726e-49 | -8.615850e-47 |
| Msa0438520 | Msa0715250 | 0.809400 | 1.928393e-50 | -8.615850e-47 |
| Msa0438520 | Msa0716620 | 0.852647 | 4.023683e-61 | -8.615850e-47 |
| Msa0438520 | Msa0716630 | 0.816856 | 4.456780e-52 | -8.615850e-47 |
| Msa0438520 | Msa0727230 | 0.812506 | 4.096024e-51 | -8.615850e-47 |
| Msa0438520 | Msa0728230 | 0.809665 | 1.691444e-50 | -8.615850e-47 |
| Msa0438520 | Msa0728520 | 0.816282 | 5.991769e-52 | -8.615850e-47 |
| Msa0438520 | Msa0728570 | 0.811841 | 5.722038e-51 | -8.615850e-47 |
| Msa0438520 | Msa0731580 | 0.850138 | 2.061480e-60 | -8.615850e-47 |
| Msa0438520 | Msa0738680 | 0.835913 | 1.271996e-56 | -8.615850e-47 |
| Msa0438520 | Msa0744550 | 0.827085 | 1.901208e-54 | -8.615850e-47 |
| Msa0438520 | Msa0744560 | 0.824538 | 7.645695e-54 | -8.615850e-47 |
| Msa0438520 | Msa0744710 | 0.826257 | 2.996515e-54 | -8.615850e-47 |
| Msa0438520 | Msa0745160 | 0.816508 | 5.333966e-52 | -8.615850e-47 |
| Msa0438520 | Msa0750790 | 0.830146 | 3.460118e-55 | -8.615850e-47 |
| Msa0438520 | Msa0750830 | 0.840532 | 8.214113e-58 | -8.615850e-47 |
| Msa0438520 | Msa0751970 | 0.805374 | 1.376878e-49 | -8.615850e-47 |
| Msa0438520 | Msa0757120 | 0.811874 | 5.628925e-51 | -8.615850e-47 |
| Msa0438520 | Msa0757220 | 0.806114 | 9.627940e-50 | -8.615850e-47 |
| Msa0438520 | Msa0771810 | 0.842756 | 2.128890e-58 | -8.615850e-47 |
| Msa0438520 | Msa0772350 | 0.863398 | 2.562115e-64 | -8.615850e-47 |
| Msa0438520 | Msa0776540 | 0.815414 | 9.356866e-52 | -8.615850e-47 |
| Msa0438520 | Msa0776660 | 0.822962 | 1.789178e-53 | -8.615850e-47 |
| Msa0438520 | Msa0789220 | 0.801844 | 7.432000e-49 | -8.615850e-47 |
| Msa0438520 | Msa0794200 | 0.816875 | 4.413487e-52 | -8.615850e-47 |
| Msa0438520 | Msa0794240 | 0.808613 | 2.841180e-50 | -8.615850e-47 |
| Msa0438520 | Msa0795320 | 0.816647 | 4.963880e-52 | -8.615850e-47 |
| Msa0438520 | Msa0799110 | 0.829457 | 5.092783e-55 | -8.615850e-47 |
| Msa0438520 | Msa0799120 | 0.845850 | 3.139921e-59 | -8.615850e-47 |
| Msa0438520 | Msa0809920 | 0.855514 | 5.995981e-62 | -8.615850e-47 |
| Msa0438520 | Msa0810340 | 0.803419 | 3.517021e-49 | -8.615850e-47 |
| Msa0438520 | Msa0814160 | 0.807345 | 5.288211e-50 | -8.615850e-47 |
| Msa0438520 | Msa0817190 | 0.814168 | 1.767782e-51 | -8.615850e-47 |
| Msa0438520 | Msa0819150 | 0.835230 | 1.893324e-56 | -8.615850e-47 |
| Msa0438520 | Msa0826240 | 0.828026 | 1.130134e-54 | -8.615850e-47 |
| Msa0438520 | Msa0826360 | 0.843969 | 1.010445e-58 | -8.615850e-47 |
| Msa0438520 | Msa0826370 | 0.818266 | 2.143628e-52 | -8.615850e-47 |
| Msa0438520 | Msa0850480 | 0.850966 | 1.206411e-60 | -8.615850e-47 |
| Msa0438520 | Msa0863840 | 0.807037 | 6.146806e-50 | -8.615850e-47 |
| Msa0438520 | Msa0865810 | 0.807123 | 5.895323e-50 | -8.615850e-47 |
| Msa0438520 | Msa0865820 | 0.826141 | 3.191752e-54 | -8.615850e-47 |
| Msa0438520 | Msa0865830 | 0.853534 | 2.241997e-61 | -8.615850e-47 |
| Msa0438520 | Msa0874750 | 0.859790 | 3.241750e-63 | -8.615850e-47 |
| Msa0438520 | Msa0896920 | 0.805554 | 1.261898e-49 | -8.615850e-47 |
| Msa0438520 | Msa0910610 | 0.822805 | 1.945922e-53 | -8.615850e-47 |
| Msa0438520 | Msa0945320 | 0.810576 | 1.076363e-50 | -8.615850e-47 |
| Msa0438520 | Msa0976400 | 0.854417 | 1.247931e-61 | -8.615850e-47 |
| Msa0438520 | Msa0985380 | 0.811295 | 7.520003e-51 | -8.615850e-47 |
| Msa0438520 | Msa1002750 | 0.813360 | 2.663097e-51 | -8.615850e-47 |
| Msa0438520 | Msa1003730 | 0.807017 | 6.207688e-50 | -8.615850e-47 |
| Msa0438520 | Msa1003920 | 0.806464 | 8.124517e-50 | -8.615850e-47 |
| Msa0438520 | Msa1022490 | 0.814763 | 1.305635e-51 | -8.615850e-47 |
| Msa0438520 | Msa1022510 | 0.812500 | 4.108262e-51 | -8.615850e-47 |
| Msa0438520 | Msa1023430 | 0.828002 | 1.145080e-54 | -8.615850e-47 |
| Msa0438520 | Msa1027340 | 0.810973 | 8.829772e-51 | -8.615850e-47 |
| Msa0438520 | Msa1027400 | 0.802993 | 4.309454e-49 | -8.615850e-47 |
| Msa0438520 | Msa1029860 | 0.805210 | 1.490146e-49 | -8.615850e-47 |
| Msa0438520 | Msa1030210 | 0.800135 | 1.661346e-48 | -8.615850e-47 |
| Msa0438520 | Msa1035050 | 0.826106 | 3.254584e-54 | -8.615850e-47 |
| Msa0438520 | Msa1037360 | 0.801879 | 7.310931e-49 | -8.615850e-47 |
| Msa0438520 | Msa1048390 | 0.806371 | 8.497642e-50 | -8.615850e-47 |
| Msa0438520 | Msa1061670 | 0.806381 | 8.457633e-50 | -8.615850e-47 |
| Msa0438520 | Msa1061840 | 0.838549 | 2.692851e-57 | -8.615850e-47 |
| Msa0438520 | Msa1062070 | 0.801602 | 8.333471e-49 | -8.615850e-47 |
| Msa0438520 | Msa1068780 | 0.811794 | 5.858327e-51 | -8.615850e-47 |
| Msa0438520 | Msa1069250 | 0.803401 | 3.547849e-49 | -8.615850e-47 |
| Msa0438520 | Msa1071350 | 0.812067 | 5.108676e-51 | -8.615850e-47 |
| Msa0438520 | Msa1075090 | 0.829434 | 5.158228e-55 | -8.615850e-47 |
| Msa0438520 | Msa1078120 | -0.803386 | 3.573932e-49 | -8.615850e-47 |
| Msa0438520 | Msa1085820 | 0.806905 | 6.554054e-50 | -8.615850e-47 |
| Msa0438520 | Msa1087380 | 0.811743 | 6.010794e-51 | -8.615850e-47 |
| Msa0438520 | Msa1100330 | 0.805249 | 1.462674e-49 | -8.615850e-47 |
| Msa0438520 | Msa1102210 | 0.805034 | 1.621922e-49 | -8.615850e-47 |
| Msa0438520 | Msa1106680 | 0.812571 | 3.964823e-51 | -8.615850e-47 |
| Msa0438520 | Msa1106960 | 0.806124 | 9.580565e-50 | -8.615850e-47 |
| Msa0438520 | Msa1107220 | 0.806768 | 7.005342e-50 | -8.615850e-47 |
| Msa0438520 | Msa1107250 | 0.800849 | 1.188050e-48 | -8.615850e-47 |
| Msa0438520 | Msa1107510 | 0.825947 | 3.550875e-54 | -8.615850e-47 |
| Msa0438520 | Msa1108560 | 0.800213 | 1.601790e-48 | -8.615850e-47 |
| Msa0438520 | Msa1110900 | 0.831839 | 1.329603e-55 | -8.615850e-47 |
| Msa0438520 | Msa1115980 | 0.813818 | 2.111294e-51 | -8.615850e-47 |
| Msa0438520 | Msa1120960 | 0.805259 | 1.455165e-49 | -8.615850e-47 |
| Msa0438520 | Msa1123000 | 0.802062 | 6.704870e-49 | -8.615850e-47 |
| Msa0438520 | Msa1124220 | 0.804814 | 1.803168e-49 | -8.615850e-47 |
| Msa0438520 | Msa1131120 | 0.805209 | 1.490977e-49 | -8.615850e-47 |
| Msa0438520 | Msa1136630 | 0.815815 | 7.619365e-52 | -8.615850e-47 |
| Msa0438520 | Msa1137750 | 0.805993 | 1.020913e-49 | -8.615850e-47 |
| Msa0438520 | Msa1142390 | 0.802519 | 5.398379e-49 | -8.615850e-47 |
| Msa0438520 | Msa1150740 | 0.810462 | 1.139260e-50 | -8.615850e-47 |
| Msa0438520 | Msa1150750 | 0.802054 | 6.728637e-49 | -8.615850e-47 |
| Msa0438520 | Msa1150760 | 0.811096 | 8.305753e-51 | -8.615850e-47 |
| Msa0438520 | Msa1151070 | 0.828179 | 1.038291e-54 | -8.615850e-47 |
| Msa0438520 | Msa1154570 | 0.812162 | 4.871188e-51 | -8.615850e-47 |
| Msa0438520 | Msa1156740 | 0.811458 | 6.929994e-51 | -8.615850e-47 |
| Msa0438520 | Msa1162430 | 0.831460 | 1.648707e-55 | -8.615850e-47 |
| Msa0438520 | Msa1167910 | 0.815774 | 7.780040e-52 | -8.615850e-47 |
| Msa0438520 | Msa1167940 | 0.803263 | 3.788956e-49 | -8.615850e-47 |
| Msa0438520 | Msa1170340 | 0.804589 | 2.009228e-49 | -8.615850e-47 |
| Msa0438520 | Msa1174280 | 0.812882 | 3.389882e-51 | -8.615850e-47 |
| Msa0438520 | Msa1191270 | 0.829681 | 4.492941e-55 | -8.615850e-47 |
| Msa0438520 | Msa1202110 | 0.812177 | 4.834693e-51 | -8.615850e-47 |
| Msa0438520 | Msa1211610 | 0.811030 | 8.582762e-51 | -8.615850e-47 |
| Msa0438520 | Msa1223990 | 0.819140 | 1.358015e-52 | -8.615850e-47 |
| Msa0438520 | Msa1239050 | 0.835644 | 1.488306e-56 | -8.615850e-47 |
| Msa0438520 | Msa1239190 | 0.800706 | 1.270557e-48 | -8.615850e-47 |
| Msa0438520 | Msa1240710 | 0.813656 | 2.291941e-51 | -8.615850e-47 |
| Msa0438520 | Msa1254870 | 0.812196 | 4.787497e-51 | -8.615850e-47 |
| Msa0438520 | Msa1263110 | 0.804046 | 2.606935e-49 | -8.615850e-47 |
| Msa0438520 | Msa1263120 | 0.805091 | 1.578249e-49 | -8.615850e-47 |
| Msa0438520 | Msa1299480 | 0.809806 | 1.577142e-50 | -8.615850e-47 |
| Msa0438520 | Msa1316960 | 0.803562 | 3.286019e-49 | -8.615850e-47 |
| Msa0438520 | Msa1319760 | 0.837768 | 4.278487e-57 | -8.615850e-47 |
| Msa0438520 | Msa1320160 | 0.818970 | 1.484004e-52 | -8.615850e-47 |
| Msa0438520 | Msa1322500 | 0.803130 | 4.038067e-49 | -8.615850e-47 |
| Msa0438520 | Msa1328430 | 0.812305 | 4.532975e-51 | -8.615850e-47 |
| Msa0438520 | Msa1349420 | 0.813926 | 1.998798e-51 | -8.615850e-47 |
| Msa0438520 | Msa1355340 | 0.827067 | 1.920152e-54 | -8.615850e-47 |
| Msa0438520 | Msa1357840 | 0.808671 | 2.761459e-50 | -8.615850e-47 |
| Msa0438520 | Msa1398120 | 0.817447 | 3.281903e-52 | -8.615850e-47 |
| Msa0438520 | Msa1407040 | 0.821495 | 3.917963e-53 | -8.615850e-47 |
| Msa0438520 | Msa1438160 | 0.812143 | 4.917462e-51 | -8.615850e-47 |
| Msa0438520 | Msa1449470 | 0.801685 | 8.012236e-49 | -8.615850e-47 |
| Msa0438520 | Msa1453890 | 0.800632 | 1.315837e-48 | -8.615850e-47 |
| Msa0438520 | Msa1459920 | 0.815052 | 1.126585e-51 | -8.615850e-47 |
| Msa0438520 | Msa1459930 | 0.836144 | 1.111512e-56 | -8.615850e-47 |
| Msa0242720 | Msa0438520 | 0.840628 | 7.754907e-58 | -8.615850e-47 |
| Msa0246140 | Msa0438520 | 0.817546 | 3.118228e-52 | -8.615850e-47 |
| Msa0267700 | Msa0438520 | 0.812471 | 4.170629e-51 | -8.615850e-47 |
| Msa0271700 | Msa0438520 | 0.828009 | 1.140516e-54 | -8.615850e-47 |
| Msa0271720 | Msa0438520 | 0.821392 | 4.138148e-53 | -8.615850e-47 |
| Msa0275730 | Msa0438520 | 0.817346 | 3.458205e-52 | -8.615850e-47 |
| Msa0278460 | Msa0438520 | 0.810083 | 1.374909e-50 | -8.615850e-47 |
| Msa0316230 | Msa0438520 | 0.814534 | 1.467293e-51 | -8.615850e-47 |
| Msa0320130 | Msa0438520 | 0.816902 | 4.351663e-52 | -8.615850e-47 |
| Msa0320140 | Msa0438520 | 0.812092 | 5.043548e-51 | -8.615850e-47 |
| Msa0320170 | Msa0438520 | 0.815914 | 7.242187e-52 | -8.615850e-47 |
| Msa0324810 | Msa0438520 | 0.822154 | 2.756603e-53 | -8.615850e-47 |
| Msa0346170 | Msa0438520 | 0.818328 | 2.076017e-52 | -8.615850e-47 |
| Msa0347320 | Msa0438520 | 0.811404 | 7.121766e-51 | -8.615850e-47 |
| Msa0348370 | Msa0438520 | 0.814375 | 1.590638e-51 | -8.615850e-47 |
| Msa0350180 | Msa0438520 | 0.830019 | 3.716098e-55 | -8.615850e-47 |
| Msa0353010 | Msa0438520 | 0.805698 | 1.177158e-49 | -8.615850e-47 |
| Msa0357550 | Msa0438520 | 0.814844 | 1.252590e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0438520 | MtrunA17_Chr3g0120661 | 95.591 | 635 | 17 | 1 | 1 | 635 | 1 | 624 | 0.0 | 1261 |
| Msa0438520 | MtrunA17_Chr2g0291461 | 57.372 | 624 | 241 | 6 | 1 | 619 | 3 | 606 | 0.0 | 691 |
| Msa0438520 | MtrunA17_Chr3g0126111 | 42.021 | 564 | 298 | 12 | 66 | 619 | 57 | 601 | 2.67e-143 | 429 |
| Msa0438520 | MtrunA17_Chr3g0142501 | 39.042 | 543 | 276 | 17 | 88 | 608 | 15 | 524 | 5.03e-100 | 315 |
| Msa0438520 | MtrunA17_Chr4g0072811 | 74.000 | 200 | 38 | 3 | 434 | 630 | 8 | 196 | 1.16e-96 | 294 |
| Msa0438520 | MtrunA17_Chr8g0388051 | 39.960 | 503 | 257 | 17 | 116 | 607 | 28 | 496 | 6.60e-93 | 299 |
| Msa0438520 | MtrunA17_Chr8g0372031 | 40.161 | 498 | 253 | 15 | 117 | 604 | 64 | 526 | 6.43e-92 | 294 |
| Msa0438520 | MtrunA17_Chr3g0119821 | 38.306 | 496 | 254 | 18 | 116 | 599 | 35 | 490 | 9.83e-91 | 290 |
| Msa0438520 | MtrunA17_Chr3g0119371 | 38.370 | 503 | 263 | 16 | 110 | 599 | 34 | 502 | 8.95e-90 | 288 |
| Msa0438520 | MtrunA17_Chr5g0439311 | 37.044 | 521 | 273 | 19 | 116 | 618 | 31 | 514 | 2.94e-89 | 286 |
| Msa0438520 | MtrunA17_Chr4g0038131 | 37.897 | 504 | 269 | 15 | 116 | 608 | 28 | 498 | 5.72e-89 | 289 |
| Msa0438520 | MtrunA17_Chr5g0397201 | 37.223 | 497 | 258 | 15 | 116 | 602 | 40 | 492 | 1.09e-84 | 274 |
| Msa0438520 | MtrunA17_Chr3g0080171 | 39.638 | 497 | 243 | 20 | 116 | 599 | 25 | 477 | 1.53e-84 | 273 |
| Msa0438520 | MtrunA17_Chr3g0145261 | 37.751 | 498 | 256 | 18 | 116 | 599 | 24 | 481 | 1.79e-83 | 270 |
| Msa0438520 | MtrunA17_Chr5g0444721 | 35.189 | 557 | 265 | 17 | 116 | 602 | 34 | 564 | 9.35e-83 | 271 |
| Msa0438520 | MtrunA17_Chr1g0195271 | 38.735 | 506 | 253 | 17 | 116 | 607 | 39 | 501 | 2.96e-82 | 268 |
| Msa0438520 | MtrunA17_Chr3g0086311 | 37.400 | 500 | 254 | 18 | 116 | 604 | 30 | 481 | 2.74e-81 | 265 |
| Msa0438520 | MtrunA17_Chr8g0391391 | 37.550 | 498 | 257 | 18 | 116 | 599 | 30 | 487 | 2.09e-80 | 263 |
| Msa0438520 | MtrunA17_Chr1g0164201 | 36.433 | 527 | 271 | 18 | 87 | 602 | 8 | 481 | 1.82e-77 | 254 |
| Msa0438520 | MtrunA17_Chr4g0018301 | 36.437 | 494 | 260 | 17 | 116 | 599 | 45 | 494 | 8.44e-76 | 251 |
| Msa0438520 | MtrunA17_Chr4g0018361 | 35.490 | 510 | 263 | 18 | 116 | 604 | 27 | 491 | 1.96e-73 | 244 |
| Msa0438520 | MtrunA17_Chr5g0397181 | 34.910 | 444 | 231 | 15 | 179 | 609 | 1 | 399 | 2.30e-63 | 214 |
| Msa0438520 | MtrunA17_Chr3g0136381 | 34.974 | 386 | 202 | 15 | 116 | 491 | 30 | 376 | 1.02e-55 | 195 |
| Msa0438520 | MtrunA17_Chr4g0018351 | 45.752 | 153 | 69 | 4 | 116 | 268 | 30 | 168 | 1.04e-35 | 134 |
| Msa0438520 | MtrunA17_Chr4g0018341 | 34.266 | 286 | 145 | 12 | 324 | 599 | 21 | 273 | 3.04e-33 | 129 |
| Msa0438520 | MtrunA17_Chr1g0164181 | 45.050 | 202 | 92 | 7 | 162 | 358 | 5 | 192 | 3.55e-30 | 121 |
| Msa0438520 | MtrunA17_Chr1g0164181 | 35.260 | 173 | 91 | 6 | 432 | 599 | 172 | 328 | 4.57e-20 | 92.0 |
| Msa0438520 | MtrunA17_Chr7g0269571 | 34.066 | 182 | 113 | 3 | 429 | 607 | 37 | 214 | 1.90e-26 | 108 |
| Msa0438520 | MtrunA17_Chr4g0022271 | 34.302 | 172 | 82 | 6 | 423 | 583 | 1 | 152 | 2.03e-20 | 89.0 |
| Msa0438520 | MtrunA17_Chr3g0136371 | 47.778 | 90 | 40 | 3 | 503 | 587 | 1 | 88 | 3.71e-18 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0438520 | AT1G65610.1 | 59.561 | 638 | 240 | 6 | 1 | 635 | 1 | 623 | 0.0 | 760 |
| Msa0438520 | AT5G49720.1 | 56.938 | 627 | 240 | 10 | 1 | 619 | 1 | 605 | 0.0 | 667 |
| Msa0438520 | AT4G24260.1 | 54.531 | 629 | 257 | 10 | 1 | 622 | 1 | 607 | 0.0 | 610 |
| Msa0438520 | AT4G24260.3 | 53.924 | 497 | 213 | 7 | 1 | 491 | 1 | 487 | 1.53e-156 | 459 |
| Msa0438520 | AT4G24260.2 | 52.036 | 442 | 196 | 7 | 1 | 436 | 1 | 432 | 9.31e-132 | 395 |
| Msa0438520 | AT1G75680.1 | 42.443 | 483 | 237 | 13 | 117 | 593 | 58 | 505 | 1.42e-98 | 311 |
| Msa0438520 | AT1G19940.2 | 40.755 | 503 | 252 | 14 | 106 | 597 | 33 | 500 | 9.28e-98 | 309 |
| Msa0438520 | AT1G19940.1 | 40.755 | 503 | 252 | 14 | 106 | 597 | 33 | 500 | 9.28e-98 | 309 |
| Msa0438520 | AT1G02800.1 | 39.882 | 509 | 255 | 17 | 107 | 605 | 34 | 501 | 4.70e-90 | 288 |
| Msa0438520 | AT4G11050.2 | 37.430 | 537 | 279 | 19 | 116 | 635 | 26 | 522 | 4.77e-90 | 290 |
| Msa0438520 | AT4G11050.3 | 37.430 | 537 | 279 | 19 | 116 | 635 | 26 | 522 | 2.77e-89 | 290 |
| Msa0438520 | AT4G11050.1 | 37.430 | 537 | 279 | 19 | 116 | 635 | 26 | 522 | 2.90e-89 | 290 |
| Msa0438520 | AT4G02290.1 | 40.726 | 496 | 241 | 17 | 116 | 599 | 52 | 506 | 3.20e-89 | 287 |
| Msa0438520 | AT4G09740.1 | 35.729 | 501 | 267 | 15 | 116 | 606 | 23 | 478 | 3.31e-87 | 280 |
| Msa0438520 | AT2G44570.1 | 37.094 | 523 | 280 | 18 | 92 | 603 | 8 | 492 | 5.16e-86 | 278 |
| Msa0438520 | AT2G32990.1 | 38.431 | 497 | 259 | 17 | 116 | 599 | 39 | 501 | 6.67e-86 | 278 |
| Msa0438520 | AT4G23560.1 | 37.924 | 501 | 256 | 16 | 117 | 607 | 24 | 479 | 1.47e-85 | 276 |
| Msa0438520 | AT1G64390.1 | 38.400 | 500 | 263 | 17 | 116 | 604 | 25 | 490 | 2.76e-85 | 280 |
| Msa0438520 | AT4G39000.1 | 38.538 | 506 | 256 | 19 | 114 | 604 | 23 | 488 | 5.79e-84 | 272 |
| Msa0438520 | AT1G71380.1 | 39.437 | 497 | 243 | 20 | 116 | 599 | 24 | 475 | 1.28e-83 | 271 |
| Msa0438520 | AT1G22880.1 | 39.265 | 517 | 248 | 21 | 98 | 599 | 10 | 475 | 2.23e-82 | 268 |
| Msa0438520 | AT1G70710.1 | 37.137 | 517 | 270 | 18 | 96 | 599 | 8 | 482 | 3.68e-82 | 268 |
| Msa0438520 | AT3G43860.2 | 38.048 | 502 | 248 | 18 | 116 | 604 | 34 | 485 | 1.69e-81 | 266 |
| Msa0438520 | AT3G43860.1 | 38.048 | 502 | 248 | 18 | 116 | 604 | 34 | 485 | 1.69e-81 | 266 |
| Msa0438520 | AT4G39010.1 | 35.700 | 507 | 273 | 19 | 116 | 608 | 29 | 496 | 1.35e-80 | 263 |
| Msa0438520 | AT1G23210.1 | 37.349 | 498 | 255 | 20 | 116 | 599 | 28 | 482 | 3.62e-80 | 262 |
| Msa0438520 | AT2G44550.1 | 35.048 | 525 | 279 | 16 | 87 | 599 | 12 | 486 | 4.83e-80 | 262 |
| Msa0438520 | AT4G38990.2 | 35.182 | 523 | 282 | 19 | 93 | 599 | 5 | 486 | 1.80e-79 | 260 |
| Msa0438520 | AT2G44540.1 | 35.551 | 526 | 279 | 18 | 87 | 599 | 12 | 490 | 1.93e-78 | 258 |
| Msa0438520 | AT1G48930.1 | 38.211 | 492 | 261 | 14 | 116 | 597 | 30 | 488 | 2.56e-77 | 258 |
| Msa0438520 | AT2G44560.1 | 36.145 | 498 | 267 | 16 | 116 | 602 | 33 | 490 | 3.45e-72 | 241 |
| Msa0438520 | AT1G19940.3 | 39.295 | 397 | 207 | 12 | 106 | 491 | 33 | 406 | 6.56e-68 | 228 |
| Msa0438520 | AT4G02290.2 | 38.337 | 433 | 216 | 16 | 179 | 599 | 1 | 394 | 2.23e-65 | 220 |
| Msa0438520 | AT1G22880.2 | 37.385 | 436 | 213 | 19 | 179 | 599 | 1 | 391 | 6.33e-62 | 211 |
| Msa0438520 | AT2G44570.2 | 34.906 | 424 | 240 | 14 | 92 | 507 | 8 | 403 | 2.64e-55 | 194 |
| Msa0438520 | AT4G39010.2 | 34.715 | 386 | 217 | 15 | 116 | 492 | 29 | 388 | 5.77e-55 | 192 |
| Msa0438520 | AT1G22880.3 | 41.194 | 335 | 152 | 15 | 98 | 423 | 10 | 308 | 6.84e-46 | 166 |
| Msa0438520 | AT4G38990.1 | 33.158 | 380 | 194 | 14 | 92 | 464 | 4 | 330 | 4.31e-44 | 161 |
Find 160 sgRNAs with CRISPR-Local
Find 325 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGTCTTCTTCTTCATATT+TGG | 0.162977 | 3_3:-2766462 | None:intergenic |
| AAGACCAAGTATGTGGATTT+TGG | 0.214969 | 3_3:+2766477 | Msa0438520:CDS |
| CATGAAATTCCATTGCTCTT+TGG | 0.243720 | 3_3:-2769458 | None:intergenic |
| ATGCCAGAGAACTCATTAAA+TGG | 0.258995 | 3_3:+2769663 | Msa0438520:CDS |
| TGAAATTGGTCAAAACTATT+TGG | 0.259930 | 3_3:-2771599 | None:intergenic |
| ATCAATTCAATGTCTTTAAC+TGG | 0.265648 | 3_3:+2770659 | Msa0438520:CDS |
| ACAGATATTGGAAAGAAATT+AGG | 0.286784 | 3_3:-2770897 | None:intergenic |
| CGTGGATAGCTCATGTCTTC+TGG | 0.287615 | 3_3:-2770148 | None:intergenic |
| AATGCCTTTAGAACAGATAT+TGG | 0.289238 | 3_3:-2770909 | None:intergenic |
| CTGTAATGTTGTTAGGATTT+CGG | 0.297943 | 3_3:-2771559 | None:intergenic |
| TGTGCTTGTTAAGGAAATTA+AGG | 0.304790 | 3_3:-2771687 | None:intergenic |
| ATTGCTCCTGTAATGTTGTT+AGG | 0.311527 | 3_3:-2771566 | None:intergenic |
| TAACCGGATGAGTTATAAAA+AGG | 0.314921 | 3_3:-2770364 | None:intergenic |
| TTTGAAGCTATTCCACCATT+TGG | 0.352217 | 3_3:+2771740 | Msa0438520:CDS |
| TTTGAAGGACCTGACCTTGC+AGG | 0.353162 | 3_3:+2770187 | Msa0438520:CDS |
| ATGGAAGCCAAAGGTGTTCC+TGG | 0.353530 | 3_3:+2770861 | Msa0438520:CDS |
| TTCCAAGGAGGTGGTGGAGG+TGG | 0.363591 | 3_3:-2771773 | None:intergenic |
| CGAAATCCTAACAACATTAC+AGG | 0.366600 | 3_3:+2771560 | Msa0438520:CDS |
| GTGGATCACTGAATGGTTCT+AGG | 0.369729 | 3_3:+2770095 | Msa0438520:CDS |
| TAATCCTGGTTACCCTTATG+AGG | 0.370170 | 3_3:+2770582 | Msa0438520:CDS |
| ATGTTGTTAGGATTTCGGTT+AGG | 0.371448 | 3_3:-2771554 | None:intergenic |
| TAGCAAAAGACATGGGAAAA+TGG | 0.378035 | 3_3:-2769574 | None:intergenic |
| TGTTGTTAGGATTTCGGTTA+GGG | 0.380281 | 3_3:-2771553 | None:intergenic |
| TGCCAACAGTAGTGATCATC+TGG | 0.384464 | 3_3:-2770121 | None:intergenic |
| TAAAATGCCTTGGAATTCTT+AGG | 0.385681 | 3_3:-2770475 | None:intergenic |
| TTGACCAATTTCATGATTCA+AGG | 0.387324 | 3_3:+2771609 | Msa0438520:CDS |
| GAGTTGGGATAATAAGTTAC+CGG | 0.391969 | 3_3:+2770522 | Msa0438520:CDS |
| ACTATGTAGCTCATGTTCAT+TGG | 0.395336 | 3_3:-2771425 | None:intergenic |
| TGCCAGAGAACTCATTAAAT+GGG | 0.398898 | 3_3:+2769664 | Msa0438520:CDS |
| TGGTAAGACTAGTAACATTA+TGG | 0.398981 | 3_3:-2770621 | None:intergenic |
| GCCATTTCTCCTGCAAGGTC+AGG | 0.400536 | 3_3:-2770196 | None:intergenic |
| TTGGAATTCTTAGGCACATC+AGG | 0.409425 | 3_3:-2770466 | None:intergenic |
| ATGAGCTACATAGTAGGATA+TGG | 0.410733 | 3_3:+2771434 | Msa0438520:CDS |
| GATGTAATCCATCTGTTTCA+TGG | 0.410762 | 3_3:-2771390 | None:intergenic |
| CTTTCCAATATCTGTTCTAA+AGG | 0.414260 | 3_3:+2770905 | Msa0438520:CDS |
| ACTACCTGTTGTGCTTGTTA+AGG | 0.414924 | 3_3:-2771696 | None:intergenic |
| TATACTGAACCAACTTTAGC+TGG | 0.415273 | 3_3:+2771644 | Msa0438520:CDS |
| GTTAGGATGTTTCTTAATCC+TGG | 0.415763 | 3_3:+2770568 | Msa0438520:CDS |
| ATACTAAGCATATCCTCATA+AGG | 0.417547 | 3_3:-2770595 | None:intergenic |
| ATGCAGCATTGACAACATAT+TGG | 0.418995 | 3_3:-2770812 | None:intergenic |
| ACCTGACCTTGCAGGAGAAA+TGG | 0.419662 | 3_3:+2770195 | Msa0438520:CDS |
| CTTCAAATACAGTTGTTGTT+GGG | 0.425949 | 3_3:-2770171 | None:intergenic |
| CCATTGATCTCCGGTGCGGC+TGG | 0.426847 | 3_3:-2766361 | None:intergenic |
| GGTTTCCAAGGAGGTGGTGG+AGG | 0.427321 | 3_3:-2771776 | None:intergenic |
| CTGCAATGTTGCTGCTAACA+AGG | 0.428791 | 3_3:+2770545 | Msa0438520:CDS |
| TTTGCATTTGCAAGAGACTT+TGG | 0.429572 | 3_3:+2770301 | Msa0438520:CDS |
| CAAAGAGCAATGGAATTTCA+TGG | 0.434088 | 3_3:+2769459 | Msa0438520:CDS |
| AATTACTCATCATGCATTCA+AGG | 0.437438 | 3_3:+2766277 | None:intergenic |
| CCTTCAAATACAGTTGTTGT+TGG | 0.439528 | 3_3:-2770172 | None:intergenic |
| ATCCACCTCCACCACCTCCT+TGG | 0.444399 | 3_3:+2771771 | Msa0438520:CDS |
| CAGCCGCACCGGAGATCAAT+GGG | 0.447656 | 3_3:+2766362 | Msa0438520:CDS |
| AAAACCTTGGCAATGATGAT+AGG | 0.448092 | 3_3:-2766576 | None:intergenic |
| AAATACTACCTACATTTCCT+TGG | 0.451110 | 3_3:+2770435 | Msa0438520:CDS |
| TCATGCATTCAAGGAATCAA+TGG | 0.452562 | 3_3:+2766286 | None:intergenic |
| AATGTCTTTAACTGGACTAA+AGG | 0.453410 | 3_3:+2770667 | Msa0438520:CDS |
| TGGTAATCGACGTGAGGGAT+TGG | 0.455806 | 3_3:+2766407 | Msa0438520:CDS |
| AGAGCAAGGGTGTAATTATC+AGG | 0.456108 | 3_3:-2766627 | None:intergenic |
| CAACTCAAAACACTCAAATC+AGG | 0.456687 | 3_3:-2770505 | None:intergenic |
| GTAGGTGAAGAATGATGTTT+AGG | 0.458364 | 3_3:-2766600 | None:intergenic |
| TGGACGAGACATTTCAAAGC+TGG | 0.461650 | 3_3:+2766427 | Msa0438520:CDS |
| ATACCATCCAGGAACACCTT+TGG | 0.461703 | 3_3:-2770868 | None:intergenic |
| TGCCTTGTCCCATTGATCTC+CGG | 0.462338 | 3_3:-2766370 | None:intergenic |
| CCTCTATGATGAACATGTCT+TGG | 0.462506 | 3_3:-2771467 | None:intergenic |
| CATGTACTCATCAAAGTAAC+CGG | 0.462682 | 3_3:-2770380 | None:intergenic |
| ATTTCCTTAACAAGCACAAC+AGG | 0.462832 | 3_3:+2771692 | Msa0438520:CDS |
| ACCCCATTTAATGAGTTCTC+TGG | 0.464185 | 3_3:-2769666 | None:intergenic |
| TGAGTCACAAGGCATTGAAA+TGG | 0.465887 | 3_3:+2766511 | Msa0438520:CDS |
| TATTAACAAAATTTATGCTC+AGG | 0.465959 | 3_3:+2769730 | Msa0438520:CDS |
| AAAGGCATTTGCAACCTCTC+AGG | 0.468135 | 3_3:+2770923 | Msa0438520:CDS |
| AATACAGTTGTTGTTGGGCG+TGG | 0.469982 | 3_3:-2770166 | None:intergenic |
| CATGCATTCAAGGAATCAAT+GGG | 0.471241 | 3_3:+2766287 | None:intergenic |
| TGTTGCTGCTAACAAGGGTT+AGG | 0.473272 | 3_3:+2770551 | Msa0438520:CDS |
| AGTACATGTGGGGTGGTGCT+TGG | 0.473838 | 3_3:+2770395 | Msa0438520:CDS |
| GAAACAGATGGATTACATCA+TGG | 0.474308 | 3_3:+2771394 | Msa0438520:CDS |
| CCAGCCGCACCGGAGATCAA+TGG | 0.478807 | 3_3:+2766361 | Msa0438520:CDS |
| ATTACTCATGCACTGGTGGT+TGG | 0.486491 | 3_3:+2771516 | Msa0438520:CDS |
| CATGGTTTCCAAGGAGGTGG+TGG | 0.493242 | 3_3:-2771779 | None:intergenic |
| GTTGGTGGTTATTATGATGC+AGG | 0.495040 | 3_3:+2769536 | Msa0438520:CDS |
| TACTAAGCATATCCTCATAA+GGG | 0.496207 | 3_3:-2770594 | None:intergenic |
| TTGCTATGACAATGCTAAGC+TGG | 0.498626 | 3_3:+2769591 | Msa0438520:CDS |
| CCAACAACAACTGTATTTGA+AGG | 0.498853 | 3_3:+2770172 | Msa0438520:CDS |
| TTGAATAAGCAGCATCGTCT+AGG | 0.501483 | 3_3:-2770249 | None:intergenic |
| AGGCTTCATATAAAATGCCT+TGG | 0.502296 | 3_3:-2770485 | None:intergenic |
| CCTGCATTTCCAGCTAAAGT+TGG | 0.502786 | 3_3:-2771653 | None:intergenic |
| CCTTCCTATCATCATTGCCA+AGG | 0.506351 | 3_3:+2766572 | Msa0438520:CDS |
| TTATATTCCCATGAAACAGA+TGG | 0.506363 | 3_3:+2771382 | Msa0438520:CDS |
| GGCGATGAGACCAGCCGCAC+CGG | 0.506587 | 3_3:+2766351 | Msa0438520:CDS |
| GGAGAGATTGTGGTTGTCCA+TGG | 0.513687 | 3_3:-2770791 | None:intergenic |
| CCAAGACATGTTCATCATAG+AGG | 0.514706 | 3_3:+2771467 | Msa0438520:CDS |
| TGAAATTCATGTTAGGTTGG+TGG | 0.514876 | 3_3:+2770076 | Msa0438520:intron |
| ATGGGATGCAGAACTGTTGA+AGG | 0.514883 | 3_3:-2769708 | None:intergenic |
| CCAACTTTAGCTGGAAATGC+AGG | 0.519047 | 3_3:+2771653 | Msa0438520:CDS |
| CAGCAATAGTGAAGTGCCAT+CGG | 0.520237 | 3_3:+2766329 | Msa0438520:CDS |
| TTCAAAGCTGGATTCTTGAA+AGG | 0.521917 | 3_3:+2766439 | Msa0438520:CDS |
| AGCAATGGAATTTCATGGAG+AGG | 0.525294 | 3_3:+2769464 | Msa0438520:CDS |
| ATGTAATCCATCTGTTTCAT+GGG | 0.525318 | 3_3:-2771389 | None:intergenic |
| ATGAACATGAGCTACATAGT+AGG | 0.525898 | 3_3:+2771428 | Msa0438520:CDS |
| TTGGTGGTTATTATGATGCA+GGG | 0.526131 | 3_3:+2769537 | Msa0438520:CDS |
| GCATCCAAAATCCACATACT+TGG | 0.535254 | 3_3:-2766481 | None:intergenic |
| AAGGCAGCGTTGCTTGATCA+TGG | 0.538698 | 3_3:+2766387 | Msa0438520:CDS |
| AGCAATAGTGAAGTGCCATC+GGG | 0.538979 | 3_3:+2766330 | Msa0438520:CDS |
| TTAACAAGCACAACAGGTAG+TGG | 0.541184 | 3_3:+2771698 | Msa0438520:CDS |
| CATGCACTGGTGGTTGGAAG+TGG | 0.541288 | 3_3:+2771522 | Msa0438520:CDS |
| ATTAGTTGCCAAGGAAATGT+AGG | 0.544392 | 3_3:-2770443 | None:intergenic |
| GGGAACTCAGGTTTACAAGA+TGG | 0.549155 | 3_3:+2769485 | Msa0438520:CDS |
| AAACAGATGGATTACATCAT+GGG | 0.554236 | 3_3:+2771395 | Msa0438520:CDS |
| AACATTACAGGAGCAATGGT+TGG | 0.556744 | 3_3:+2771572 | Msa0438520:CDS |
| GTTAGCAGCAACATTGCAGC+CGG | 0.560502 | 3_3:-2770541 | None:intergenic |
| GAATGATATCATGGTTTCCA+AGG | 0.560598 | 3_3:-2771788 | None:intergenic |
| TAGGTTGGTGGATCACTGAA+TGG | 0.562722 | 3_3:+2770088 | Msa0438520:intron |
| GTGTAATTATCAGGTGGTGT+AGG | 0.566017 | 3_3:-2766618 | None:intergenic |
| CACCGGAGATCAATGGGACA+AGG | 0.566153 | 3_3:+2766368 | Msa0438520:CDS |
| CGGCTGGTCTCATCGCCCGA+TGG | 0.570578 | 3_3:-2766345 | None:intergenic |
| GAAGAAGAAGACCAAGTATG+TGG | 0.572331 | 3_3:+2766470 | Msa0438520:CDS |
| ATTTCATGGAGAGGGAACTC+AGG | 0.573575 | 3_3:+2769473 | Msa0438520:CDS |
| CCTTGGCAATGATGATAGGA+AGG | 0.574607 | 3_3:-2766572 | None:intergenic |
| GCTGATTATATGGAAGCCAA+AGG | 0.576136 | 3_3:+2770852 | Msa0438520:CDS |
| GTTACTTTGATGAGTACATG+TGG | 0.577224 | 3_3:+2770383 | Msa0438520:CDS |
| GCAATGGAATTTCATGGAGA+GGG | 0.579923 | 3_3:+2769465 | Msa0438520:CDS |
| CATTGTCATAGCAAAAGACA+TGG | 0.581404 | 3_3:-2769582 | None:intergenic |
| GGGAGATTGCCAAAGAGCAA+TGG | 0.582582 | 3_3:+2769449 | Msa0438520:CDS |
| CACATCAGGATTAGTTGCCA+AGG | 0.583526 | 3_3:-2770452 | None:intergenic |
| ACAACATATTGGAGAGATTG+TGG | 0.586233 | 3_3:-2770801 | None:intergenic |
| ATGATGTTTAGGCAAAACCT+TGG | 0.586680 | 3_3:-2766589 | None:intergenic |
| CTGCTGCCATTTCTCCTGCA+AGG | 0.587328 | 3_3:-2770201 | None:intergenic |
| AAGCCAAAGGTGTTCCTGGA+TGG | 0.590814 | 3_3:+2770865 | Msa0438520:CDS |
| CACCAGATGATCACTACTGT+TGG | 0.591909 | 3_3:+2770119 | Msa0438520:CDS |
| TATCATGGTTTCCAAGGAGG+TGG | 0.593765 | 3_3:-2771782 | None:intergenic |
| ATTACAGGAGCAATGGTTGG+AGG | 0.593896 | 3_3:+2771575 | Msa0438520:CDS |
| GGTGTTCCTGGATGGTATTG+TGG | 0.602884 | 3_3:+2770873 | Msa0438520:CDS |
| TAACAACATTACAGGAGCAA+TGG | 0.606000 | 3_3:+2771568 | Msa0438520:CDS |
| ATATCCTCATAAGGGTAACC+AGG | 0.610242 | 3_3:-2770586 | None:intergenic |
| TATTCAAAGAAACTCGTCAA+GGG | 0.616213 | 3_3:+2770265 | Msa0438520:CDS |
| TTAGGACCACAATACCATCC+AGG | 0.617520 | 3_3:-2770879 | None:intergenic |
| TGCAATGTTGCTGCTAACAA+GGG | 0.618825 | 3_3:+2770546 | Msa0438520:CDS |
| AAAGTCTCTTGCAAATGCAA+AGG | 0.621930 | 3_3:-2770299 | None:intergenic |
| GTAGCGCTTTGTGAAGAGCA+AGG | 0.623041 | 3_3:-2766641 | None:intergenic |
| TAGCGCTTTGTGAAGAGCAA+GGG | 0.623820 | 3_3:-2766640 | None:intergenic |
| CATTCAAGGAATCAATGGGG+AGG | 0.631381 | 3_3:+2766291 | Msa0438520:CDS |
| GATCATGGTAATCGACGTGA+GGG | 0.635900 | 3_3:+2766402 | Msa0438520:CDS |
| TGATGTGCCTAAGAATTCCA+AGG | 0.638916 | 3_3:+2770468 | Msa0438520:CDS |
| TGATCATGGTAATCGACGTG+AGG | 0.639459 | 3_3:+2766401 | Msa0438520:CDS |
| TGATATCATGGTTTCCAAGG+AGG | 0.640965 | 3_3:-2771785 | None:intergenic |
| ATTCAAGGAATCAATGGGGA+GGG | 0.642541 | 3_3:+2766292 | Msa0438520:CDS |
| TTATTCAAAGAAACTCGTCA+AGG | 0.644851 | 3_3:+2770264 | Msa0438520:CDS |
| TTTGATGAGTACATGTGGGG+TGG | 0.652316 | 3_3:+2770388 | Msa0438520:CDS |
| TACTTTGATGAGTACATGTG+GGG | 0.670908 | 3_3:+2770385 | Msa0438520:CDS |
| GCCAGAGAACTCATTAAATG+GGG | 0.671647 | 3_3:+2769665 | Msa0438520:CDS |
| ATTGTCATAGCAAAAGACAT+GGG | 0.674505 | 3_3:-2769581 | None:intergenic |
| ATGCATCGTGTTGAGTCACA+AGG | 0.674798 | 3_3:+2766500 | Msa0438520:CDS |
| TTGATGAAGATAAGAGCACA+TGG | 0.677233 | 3_3:-2770641 | None:intergenic |
| AAAAGATCAACATACAGTCG+CGG | 0.678960 | 3_3:+2770325 | Msa0438520:CDS |
| GCAAGGGTGTAATTATCAGG+TGG | 0.684686 | 3_3:-2766624 | None:intergenic |
| AATGTAGGTAGTATTTCCAG+TGG | 0.704279 | 3_3:-2770428 | None:intergenic |
| GGGTTGATACAATTGAACCA+TGG | 0.709415 | 3_3:+2770774 | Msa0438520:CDS |
| TTACTTTGATGAGTACATGT+GGG | 0.709906 | 3_3:+2770384 | Msa0438520:CDS |
| TGGTGGTTATTATGATGCAG+GGG | 0.711733 | 3_3:+2769538 | Msa0438520:CDS |
| TGTCCCATTGATCTCCGGTG+CGG | 0.718263 | 3_3:-2766365 | None:intergenic |
| TGACGAATTTGGTACCTGAG+AGG | 0.773845 | 3_3:-2770937 | None:intergenic |
| ATGCATTCAAGGAATCAATG+GGG | 0.776623 | 3_3:+2766288 | Msa0438520:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATAATAATAAAATAATA+AGG | + | chr3_3:2767855-2767874 | Msa0438520:intron | 0.0% |
| !! | AATAAATCAAATAAAATCAT+GGG | - | chr3_3:2766804-2766823 | None:intergenic | 10.0% |
| !! | TAATAAATCAAATAAAATCA+TGG | - | chr3_3:2766805-2766824 | None:intergenic | 10.0% |
| !!! | AATTAAACTTTACTTTTTTT+TGG | + | chr3_3:2767170-2767189 | Msa0438520:intron | 10.0% |
| !!! | GTTTTTCATTTATAATATTA+AGG | - | chr3_3:2767374-2767393 | None:intergenic | 10.0% |
| !! | TATTATATATTGTATTTCAT+TGG | - | chr3_3:2767416-2767435 | None:intergenic | 10.0% |
| !!! | TCATATTTTTTTTTTTTTGA+AGG | + | chr3_3:2767562-2767581 | Msa0438520:intron | 10.0% |
| !!! | TAGTTAAAATATGTTTTTTT+GGG | - | chr3_3:2767684-2767703 | None:intergenic | 10.0% |
| !!! | TTAGTTAAAATATGTTTTTT+TGG | - | chr3_3:2767685-2767704 | None:intergenic | 10.0% |
| !!! | AATTTTTTGAATAAAAAACA+AGG | - | chr3_3:2770721-2770740 | None:intergenic | 10.0% |
| !!! | ATACACTCAATATATTTTTT+AGG | + | chr3_3:2766833-2766852 | Msa0438520:intron | 15.0% |
| !!! | CTCTATTTTTATTTATTCTA+AGG | - | chr3_3:2766895-2766914 | None:intergenic | 15.0% |
| !! | AATTTGCATTATATATTCAA+GGG | - | chr3_3:2767266-2767285 | None:intergenic | 15.0% |
| !! | AAATTTGCATTATATATTCA+AGG | - | chr3_3:2767267-2767286 | None:intergenic | 15.0% |
| !! | AAATAAATAAATTCTACAGA+AGG | - | chr3_3:2767460-2767479 | None:intergenic | 15.0% |
| !!! | ATATTTGTTTTCTTACAAAA+GGG | + | chr3_3:2767597-2767616 | Msa0438520:intron | 15.0% |
| !!! | AGTTAAAATATGTTTTTTTG+GGG | - | chr3_3:2767683-2767702 | None:intergenic | 15.0% |
| !! | ACTAGTTAAAAAAAATGAAA+AGG | - | chr3_3:2768142-2768161 | None:intergenic | 15.0% |
| !! | AAATAAAAAATGATATCAAC+AGG | + | chr3_3:2768303-2768322 | Msa0438520:intron | 15.0% |
| !!! | CTCAAAAAAAAAAAATGTTT+TGG | + | chr3_3:2768454-2768473 | Msa0438520:intron | 15.0% |
| !! | TTATAACCAAAATTAATAGA+AGG | - | chr3_3:2768533-2768552 | None:intergenic | 15.0% |
| !!! | TTGTTATTAGCAAAAATTAA+TGG | - | chr3_3:2768610-2768629 | None:intergenic | 15.0% |
| !!! | AACCAATTAAATTTGTTATT+TGG | + | chr3_3:2768709-2768728 | Msa0438520:intron | 15.0% |
| !!! | TGATTCAAATTATTTTTGTA+AGG | - | chr3_3:2769311-2769330 | None:intergenic | 15.0% |
| !! | TGAATATAAACAAAAATACA+TGG | + | chr3_3:2769622-2769641 | Msa0438520:CDS | 15.0% |
| !!! | AGCATAAATTTTGTTAATAT+GGG | - | chr3_3:2769729-2769748 | None:intergenic | 15.0% |
| !! | TTAACATCTTTATTAACTAG+AGG | - | chr3_3:2767011-2767030 | None:intergenic | 20.0% |
| !!! | ATTATTCACTTGCTATATTA+TGG | + | chr3_3:2767045-2767064 | Msa0438520:intron | 20.0% |
| !! | AATATCATAGATCATCTTAA+AGG | + | chr3_3:2767101-2767120 | Msa0438520:intron | 20.0% |
| !! | TGGATAATAATTTACCTTTA+TGG | + | chr3_3:2767207-2767226 | Msa0438520:intron | 20.0% |
| !! | GGATAATAATTTACCTTTAT+GGG | + | chr3_3:2767208-2767227 | Msa0438520:intron | 20.0% |
| !! | GATAATAATTTACCTTTATG+GGG | + | chr3_3:2767209-2767228 | Msa0438520:intron | 20.0% |
| !!! | CATATTTGTTTTCTTACAAA+AGG | + | chr3_3:2767596-2767615 | Msa0438520:intron | 20.0% |
| !! | TATGGGATGAAATTATTTAA+AGG | - | chr3_3:2768268-2768287 | None:intergenic | 20.0% |
| !! | AAATAAGAATGGAATGAAAA+CGG | - | chr3_3:2768392-2768411 | None:intergenic | 20.0% |
| !!! | ATTAGTCCTTCTATTAATTT+TGG | + | chr3_3:2768524-2768543 | Msa0438520:intron | 20.0% |
| !! | TGAAAATGTTCATATTTAGT+TGG | + | chr3_3:2768584-2768603 | Msa0438520:intron | 20.0% |
| !!! | CAATTAAATTTGTTATTTGG+CGG | + | chr3_3:2768712-2768731 | Msa0438520:intron | 20.0% |
| !!! | CTATTTTTTGGACAAAATAA+GGG | - | chr3_3:2768836-2768855 | None:intergenic | 20.0% |
| !!! | ACTATTTTTTGGACAAAATA+AGG | - | chr3_3:2768837-2768856 | None:intergenic | 20.0% |
| !!! | TTTAGTTTTCTAGTTATTGT+TGG | + | chr3_3:2768970-2768989 | Msa0438520:intron | 20.0% |
| !! | AATTCATTTCATGTCATAAA+AGG | - | chr3_3:2769141-2769160 | None:intergenic | 20.0% |
| !! | TGCAATTATCATCTTATTAA+AGG | - | chr3_3:2769257-2769276 | None:intergenic | 20.0% |
| !!! | CTAGTACATTTTTAAACATA+TGG | - | chr3_3:2769280-2769299 | None:intergenic | 20.0% |
| !! | AAAGTCTAAGTGAAAAATTA+AGG | + | chr3_3:2769348-2769367 | Msa0438520:intron | 20.0% |
| !! | AGTTACATCATTAAAAATCA+TGG | - | chr3_3:2769397-2769416 | None:intergenic | 20.0% |
| !!! | GAGCATAAATTTTGTTAATA+TGG | - | chr3_3:2769730-2769749 | None:intergenic | 20.0% |
| !! | TATTAACAAAATTTATGCTC+AGG | + | chr3_3:2769730-2769749 | Msa0438520:CDS | 20.0% |
| !! | ATGAAAGTTGGAATATTTAA+GGG | - | chr3_3:2769872-2769891 | None:intergenic | 20.0% |
| !! | TATGAAAGTTGGAATATTTA+AGG | - | chr3_3:2769873-2769892 | None:intergenic | 20.0% |
| !! | CATTATTGAGATCATAAATT+TGG | + | chr3_3:2770034-2770053 | Msa0438520:intron | 20.0% |
| !! | TTATAAAAAGGTTCAATGTA+AGG | - | chr3_3:2770355-2770374 | None:intergenic | 20.0% |
| !! | TATCTAAATACTGAGAATTA+TGG | - | chr3_3:2771174-2771193 | None:intergenic | 20.0% |
| !!! | ATTTTTGGTACAATCTTTGT+AGG | + | chr3_3:2766534-2766553 | Msa0438520:CDS | 25.0% |
| !! | TTTGTAGGTTTTTGTGTAAT+TGG | + | chr3_3:2766549-2766568 | Msa0438520:CDS | 25.0% |
| !!! | AAGCAAACAACATTTTGAAA+GGG | - | chr3_3:2766923-2766942 | None:intergenic | 25.0% |
| !! | AAAGCAAACAACATTTTGAA+AGG | - | chr3_3:2766924-2766943 | None:intergenic | 25.0% |
| !! | ATGCATATATGCTTTTGAAT+AGG | + | chr3_3:2766947-2766966 | Msa0438520:intron | 25.0% |
| !! | TTTTGGATCAAGTAGTTTAA+TGG | + | chr3_3:2767187-2767206 | Msa0438520:intron | 25.0% |
| ! | CATCATAAACTTAACTCAAT+TGG | - | chr3_3:2767294-2767313 | None:intergenic | 25.0% |
| ! | TATTAAGGGTAATCGTATTT+AGG | - | chr3_3:2767359-2767378 | None:intergenic | 25.0% |
| ! | TATACGTGAGATAAACAATT+TGG | + | chr3_3:2767760-2767779 | Msa0438520:intron | 25.0% |
| ! | ATAAACAATTTGGATGTGTT+TGG | + | chr3_3:2767770-2767789 | Msa0438520:intron | 25.0% |
| ! | AGCATTTGGCAATAATAAAA+TGG | - | chr3_3:2768207-2768226 | None:intergenic | 25.0% |
| ! | AAAAAATGATATCAACAGGA+CGG | + | chr3_3:2768307-2768326 | Msa0438520:intron | 25.0% |
| ! | AATAAGAATGGAATGAAAAC+GGG | - | chr3_3:2768391-2768410 | None:intergenic | 25.0% |
| ! | ATCGTGAAACAAAATAAGAA+TGG | - | chr3_3:2768403-2768422 | None:intergenic | 25.0% |
| !! | ATAACACGCTTTATATGTTT+TGG | + | chr3_3:2768421-2768440 | Msa0438520:intron | 25.0% |
| ! | CTAATAACAACAAAATTGAG+AGG | + | chr3_3:2768620-2768639 | Msa0438520:intron | 25.0% |
| !! | AGAGAGTTTTTATCAAGAAA+AGG | + | chr3_3:2768682-2768701 | Msa0438520:intron | 25.0% |
| ! | CGCCAAATAACAAATTTAAT+TGG | - | chr3_3:2768714-2768733 | None:intergenic | 25.0% |
| ! | AATAAGGGAAATGATAGATA+CGG | - | chr3_3:2768821-2768840 | None:intergenic | 25.0% |
| !!! | GCGATGTATTAACTATTTTT+TGG | - | chr3_3:2768848-2768867 | None:intergenic | 25.0% |
| !!! | ATGTATCGATCCAATTTTAT+CGG | - | chr3_3:2768914-2768933 | None:intergenic | 25.0% |
| !!! | AACAAGTCCTTTTTTATCAT+CGG | - | chr3_3:2769519-2769538 | None:intergenic | 25.0% |
| ! | TTGAGATTGTATATGAAAGT+TGG | - | chr3_3:2769884-2769903 | None:intergenic | 25.0% |
| ! | AACTTTCATATACAATCTCA+AGG | + | chr3_3:2769883-2769902 | Msa0438520:intron | 25.0% |
| !! | ATACATCTGAAATTCATGTT+AGG | + | chr3_3:2770069-2770088 | Msa0438520:intron | 25.0% |
| ! | ATCAATTCAATGTCTTTAAC+TGG | + | chr3_3:2770659-2770678 | Msa0438520:CDS | 25.0% |
| ! | AAGTTTCAACAAAATTTGCA+GGG | + | chr3_3:2770751-2770770 | Msa0438520:intron | 25.0% |
| !!! | ATCTCTTTTTGCTGATTATA+TGG | + | chr3_3:2770842-2770861 | Msa0438520:CDS | 25.0% |
| ! | ACAGATATTGGAAAGAAATT+AGG | - | chr3_3:2770900-2770919 | None:intergenic | 25.0% |
| ! | CTTAACACAATTTAAGTAGT+TGG | + | chr3_3:2771051-2771070 | Msa0438520:intron | 25.0% |
| ! | GTTTAATGAAGTTACATTTG+TGG | - | chr3_3:2771131-2771150 | None:intergenic | 25.0% |
| ! | CAAATGTAACTTCATTAAAC+TGG | + | chr3_3:2771131-2771150 | Msa0438520:intron | 25.0% |
| !! | AACTTCATTAAACTGGATTT+TGG | + | chr3_3:2771138-2771157 | Msa0438520:intron | 25.0% |
| !! | GAGTAATTTTTGTGATCATT+TGG | - | chr3_3:2771503-2771522 | None:intergenic | 25.0% |
| ! | TGAAATTGGTCAAAACTATT+TGG | - | chr3_3:2771602-2771621 | None:intergenic | 25.0% |
| !! | TTTTCCTTGAATCATGAAAT+TGG | - | chr3_3:2771616-2771635 | None:intergenic | 25.0% |
| ! | TTGGTCTTCTTCTTCATATT+TGG | - | chr3_3:2766465-2766484 | None:intergenic | 30.0% |
| !!! | AAGGCATTGAAATGGATTTT+TGG | + | chr3_3:2766519-2766538 | Msa0438520:CDS | 30.0% |
| TGCATTATTCTGTTCTCATT+TGG | + | chr3_3:2766749-2766768 | Msa0438520:intron | 30.0% | |
| TTATTCTGTTCTCATTTGGT+TGG | + | chr3_3:2766753-2766772 | Msa0438520:intron | 30.0% | |
| TTTCAGTTTATTCCCCATAA+AGG | - | chr3_3:2767224-2767243 | None:intergenic | 30.0% | |
| TGCATTATATATTCAAGGGT+CGG | - | chr3_3:2767262-2767281 | None:intergenic | 30.0% | |
| AAAGTGCATTTGTAAGATGA+TGG | - | chr3_3:2767953-2767972 | None:intergenic | 30.0% | |
| TTATTGCCAAATGCTATCTA+AGG | + | chr3_3:2768212-2768231 | Msa0438520:intron | 30.0% | |
| AAAAGACCTTAGATAGCATT+TGG | - | chr3_3:2768221-2768240 | None:intergenic | 30.0% | |
| TTGAAAGAGTCAAGAACTAT+GGG | - | chr3_3:2768285-2768304 | None:intergenic | 30.0% | |
| TTTGAAAGAGTCAAGAACTA+TGG | - | chr3_3:2768286-2768305 | None:intergenic | 30.0% | |
| AATGGTGTGTAATTAAGGAA+AGG | + | chr3_3:2768749-2768768 | Msa0438520:intron | 30.0% | |
| TATTTGATATGTTGTGGTGT+AGG | - | chr3_3:2769109-2769128 | None:intergenic | 30.0% | |
| CATGGATATTTGATATGTTG+TGG | - | chr3_3:2769115-2769134 | None:intergenic | 30.0% | |
| AAAGACACCGATGATAAAAA+AGG | + | chr3_3:2769509-2769528 | Msa0438520:CDS | 30.0% | |
| GATGATAAAAAAGGACTTGT+TGG | + | chr3_3:2769518-2769537 | Msa0438520:CDS | 30.0% | |
| ATTGTCATAGCAAAAGACAT+GGG | - | chr3_3:2769584-2769603 | None:intergenic | 30.0% | |
| GTAATGGCAAAGACTAAAAT+TGG | - | chr3_3:2769951-2769970 | None:intergenic | 30.0% | |
| ATTTCAGATGTATTGCTCTT+AGG | - | chr3_3:2770062-2770081 | None:intergenic | 30.0% | |
| ! | ATCTGAAATTCATGTTAGGT+TGG | + | chr3_3:2770073-2770092 | Msa0438520:intron | 30.0% |
| ! | CTTCAAATACAGTTGTTGTT+GGG | - | chr3_3:2770174-2770193 | None:intergenic | 30.0% |
| TTATTCAAAGAAACTCGTCA+AGG | + | chr3_3:2770264-2770283 | Msa0438520:CDS | 30.0% | |
| TATTCAAAGAAACTCGTCAA+GGG | + | chr3_3:2770265-2770284 | Msa0438520:CDS | 30.0% | |
| ! | GAACCTTTTTATAACTCATC+CGG | + | chr3_3:2770361-2770380 | Msa0438520:CDS | 30.0% |
| TAACCGGATGAGTTATAAAA+AGG | - | chr3_3:2770367-2770386 | None:intergenic | 30.0% | |
| TTACTTTGATGAGTACATGT+GGG | + | chr3_3:2770384-2770403 | Msa0438520:CDS | 30.0% | |
| AAATACTACCTACATTTCCT+TGG | + | chr3_3:2770435-2770454 | Msa0438520:CDS | 30.0% | |
| TAAAATGCCTTGGAATTCTT+AGG | - | chr3_3:2770478-2770497 | None:intergenic | 30.0% | |
| !!! | TGATTTGAGTGTTTTGAGTT+GGG | + | chr3_3:2770507-2770526 | Msa0438520:CDS | 30.0% |
| TACTAAGCATATCCTCATAA+GGG | - | chr3_3:2770597-2770616 | None:intergenic | 30.0% | |
| ATACTAAGCATATCCTCATA+AGG | - | chr3_3:2770598-2770617 | None:intergenic | 30.0% | |
| TGGTAAGACTAGTAACATTA+TGG | - | chr3_3:2770624-2770643 | None:intergenic | 30.0% | |
| AATGTCTTTAACTGGACTAA+AGG | + | chr3_3:2770667-2770686 | Msa0438520:CDS | 30.0% | |
| GAAGTTTCAACAAAATTTGC+AGG | + | chr3_3:2770750-2770769 | Msa0438520:intron | 30.0% | |
| AGTTTCAACAAAATTTGCAG+GGG | + | chr3_3:2770752-2770771 | Msa0438520:intron | 30.0% | |
| CTTTCCAATATCTGTTCTAA+AGG | + | chr3_3:2770905-2770924 | Msa0438520:CDS | 30.0% | |
| !! | AATGCCTTTAGAACAGATAT+TGG | - | chr3_3:2770912-2770931 | None:intergenic | 30.0% |
| TCAAAATGATGTGACGAATT+TGG | - | chr3_3:2770951-2770970 | None:intergenic | 30.0% | |
| GGTTAATTACGTTCAGTAAA+TGG | + | chr3_3:2771072-2771091 | Msa0438520:intron | 30.0% | |
| TTATATTCCCATGAAACAGA+TGG | + | chr3_3:2771382-2771401 | Msa0438520:CDS | 30.0% | |
| ATGTAATCCATCTGTTTCAT+GGG | - | chr3_3:2771392-2771411 | None:intergenic | 30.0% | |
| !! | AAACAGATGGATTACATCAT+GGG | + | chr3_3:2771395-2771414 | Msa0438520:CDS | 30.0% |
| CTGTAATGTTGTTAGGATTT+CGG | - | chr3_3:2771562-2771581 | None:intergenic | 30.0% | |
| TTGACCAATTTCATGATTCA+AGG | + | chr3_3:2771609-2771628 | Msa0438520:CDS | 30.0% | |
| ! | TGTGCTTGTTAAGGAAATTA+AGG | - | chr3_3:2771690-2771709 | None:intergenic | 30.0% |
| CAAAAATGGTATTAACGTCA+AGG | - | chr3_3:2771724-2771743 | None:intergenic | 30.0% | |
| ATGCATTCAAGGAATCAATG+GGG | + | chr3_3:2766288-2766307 | Msa0438520:CDS | 35.0% | |
| TTCAAAGCTGGATTCTTGAA+AGG | + | chr3_3:2766439-2766458 | Msa0438520:CDS | 35.0% | |
| ! | AAGACCAAGTATGTGGATTT+TGG | + | chr3_3:2766477-2766496 | Msa0438520:CDS | 35.0% |
| AAAACCTTGGCAATGATGAT+AGG | - | chr3_3:2766579-2766598 | None:intergenic | 35.0% | |
| ATGATGTTTAGGCAAAACCT+TGG | - | chr3_3:2766592-2766611 | None:intergenic | 35.0% | |
| GTAGGTGAAGAATGATGTTT+AGG | - | chr3_3:2766603-2766622 | None:intergenic | 35.0% | |
| ! | TATATGCTTTTGAATAGGCG+TGG | + | chr3_3:2766952-2766971 | Msa0438520:intron | 35.0% |
| GCATTATATATTCAAGGGTC+GGG | - | chr3_3:2767261-2767280 | None:intergenic | 35.0% | |
| GGATAGTTGTATTTGATCGA+AGG | - | chr3_3:2767338-2767357 | None:intergenic | 35.0% | |
| TTTCCATAAGCACAGTTTCA+GGG | - | chr3_3:2768010-2768029 | None:intergenic | 35.0% | |
| ! | TTTTCCATAAGCACAGTTTC+AGG | - | chr3_3:2768011-2768030 | None:intergenic | 35.0% |
| TAGACACAAAATCTCCTAAG+CGG | - | chr3_3:2768035-2768054 | None:intergenic | 35.0% | |
| AGGAATTCAAAGCAACTTGT+TGG | - | chr3_3:2768248-2768267 | None:intergenic | 35.0% | |
| ! | TTGTGTCGCTAGTATTTGAA+TGG | + | chr3_3:2768353-2768372 | Msa0438520:intron | 35.0% |
| !! | TTGTTATTTGGCGGAAATCA+AGG | + | chr3_3:2768721-2768740 | Msa0438520:intron | 35.0% |
| ! | TGTTATTTGGCGGAAATCAA+GGG | + | chr3_3:2768722-2768741 | Msa0438520:intron | 35.0% |
| ! | GAGGTAATGGTGTGTAATTA+AGG | + | chr3_3:2768744-2768763 | Msa0438520:intron | 35.0% |
| ! | TTTTATCGGAAGTTCCTGAA+GGG | - | chr3_3:2768900-2768919 | None:intergenic | 35.0% |
| ! | ATTTTATCGGAAGTTCCTGA+AGG | - | chr3_3:2768901-2768920 | None:intergenic | 35.0% |
| TCAGGAACTTCCGATAAAAT+TGG | + | chr3_3:2768901-2768920 | Msa0438520:intron | 35.0% | |
| TACCAATTGTTGAGAAGTAG+AGG | + | chr3_3:2769069-2769088 | Msa0438520:intron | 35.0% | |
| ATCCTCTACTTCTCAACAAT+TGG | - | chr3_3:2769074-2769093 | None:intergenic | 35.0% | |
| TCATGTCATAAAAGGTTGCA+TGG | - | chr3_3:2769133-2769152 | None:intergenic | 35.0% | |
| !! | TACCTTTGATTTGTGAAGCT+GGG | + | chr3_3:2769429-2769448 | Msa0438520:intron | 35.0% |
| CATGAAATTCCATTGCTCTT+TGG | - | chr3_3:2769461-2769480 | None:intergenic | 35.0% | |
| CAAAGAGCAATGGAATTTCA+TGG | + | chr3_3:2769459-2769478 | Msa0438520:CDS | 35.0% | |
| !! | GATAAAAAAGGACTTGTTGG+TGG | + | chr3_3:2769521-2769540 | Msa0438520:CDS | 35.0% |
| ! | TTGGTGGTTATTATGATGCA+GGG | + | chr3_3:2769537-2769556 | Msa0438520:CDS | 35.0% |
| TAGCAAAAGACATGGGAAAA+TGG | - | chr3_3:2769577-2769596 | None:intergenic | 35.0% | |
| CATTGTCATAGCAAAAGACA+TGG | - | chr3_3:2769585-2769604 | None:intergenic | 35.0% | |
| ATGCCAGAGAACTCATTAAA+TGG | + | chr3_3:2769663-2769682 | Msa0438520:CDS | 35.0% | |
| TGCCAGAGAACTCATTAAAT+GGG | + | chr3_3:2769664-2769683 | Msa0438520:CDS | 35.0% | |
| AATACGCGACTTCTTCAATA+GGG | - | chr3_3:2769817-2769836 | None:intergenic | 35.0% | |
| !! | TGAAATTCATGTTAGGTTGG+TGG | + | chr3_3:2770076-2770095 | Msa0438520:intron | 35.0% |
| CCTTCAAATACAGTTGTTGT+TGG | - | chr3_3:2770175-2770194 | None:intergenic | 35.0% | |
| CCAACAACAACTGTATTTGA+AGG | + | chr3_3:2770172-2770191 | Msa0438520:CDS | 35.0% | |
| AAAGTCTCTTGCAAATGCAA+AGG | - | chr3_3:2770302-2770321 | None:intergenic | 35.0% | |
| TTTGCATTTGCAAGAGACTT+TGG | + | chr3_3:2770301-2770320 | Msa0438520:CDS | 35.0% | |
| AAAAGATCAACATACAGTCG+CGG | + | chr3_3:2770325-2770344 | Msa0438520:CDS | 35.0% | |
| CATGTACTCATCAAAGTAAC+CGG | - | chr3_3:2770383-2770402 | None:intergenic | 35.0% | |
| ! | GTTACTTTGATGAGTACATG+TGG | + | chr3_3:2770383-2770402 | Msa0438520:CDS | 35.0% |
| TACTTTGATGAGTACATGTG+GGG | + | chr3_3:2770385-2770404 | Msa0438520:CDS | 35.0% | |
| AATGTAGGTAGTATTTCCAG+TGG | - | chr3_3:2770431-2770450 | None:intergenic | 35.0% | |
| ATTAGTTGCCAAGGAAATGT+AGG | - | chr3_3:2770446-2770465 | None:intergenic | 35.0% | |
| AGGCTTCATATAAAATGCCT+TGG | - | chr3_3:2770488-2770507 | None:intergenic | 35.0% | |
| CAACTCAAAACACTCAAATC+AGG | - | chr3_3:2770508-2770527 | None:intergenic | 35.0% | |
| !! | CTGATTTGAGTGTTTTGAGT+TGG | + | chr3_3:2770506-2770525 | Msa0438520:CDS | 35.0% |
| GAGTTGGGATAATAAGTTAC+CGG | + | chr3_3:2770522-2770541 | Msa0438520:CDS | 35.0% | |
| GTTAGGATGTTTCTTAATCC+TGG | + | chr3_3:2770568-2770587 | Msa0438520:CDS | 35.0% | |
| ! | TTGATGAAGATAAGAGCACA+TGG | - | chr3_3:2770644-2770663 | None:intergenic | 35.0% |
| GTTTCAACAAAATTTGCAGG+GGG | + | chr3_3:2770753-2770772 | Msa0438520:intron | 35.0% | |
| TTTCAACAAAATTTGCAGGG+GGG | + | chr3_3:2770754-2770773 | Msa0438520:intron | 35.0% | |
| ACAACATATTGGAGAGATTG+TGG | - | chr3_3:2770804-2770823 | None:intergenic | 35.0% | |
| !! | ATGCAGCATTGACAACATAT+TGG | - | chr3_3:2770815-2770834 | None:intergenic | 35.0% |
| ! | TGTTGTCAATGCTGCATTTT+TGG | + | chr3_3:2770818-2770837 | Msa0438520:CDS | 35.0% |
| TACGTTCAGTAAATGGTCAA+TGG | + | chr3_3:2771079-2771098 | Msa0438520:intron | 35.0% | |
| AAATGGTCAATGGATATACC+AGG | + | chr3_3:2771089-2771108 | Msa0438520:intron | 35.0% | |
| AGTTGAACACCTGAGAATTA+TGG | + | chr3_3:2771201-2771220 | Msa0438520:intron | 35.0% | |
| GATGTAATCCATCTGTTTCA+TGG | - | chr3_3:2771393-2771412 | None:intergenic | 35.0% | |
| !! | GAAACAGATGGATTACATCA+TGG | + | chr3_3:2771394-2771413 | Msa0438520:CDS | 35.0% |
| ACTATGTAGCTCATGTTCAT+TGG | - | chr3_3:2771428-2771447 | None:intergenic | 35.0% | |
| ATGAACATGAGCTACATAGT+AGG | + | chr3_3:2771428-2771447 | Msa0438520:CDS | 35.0% | |
| ATGAGCTACATAGTAGGATA+TGG | + | chr3_3:2771434-2771453 | Msa0438520:CDS | 35.0% | |
| CACAAAAATTACTCATGCAC+TGG | + | chr3_3:2771509-2771528 | Msa0438520:CDS | 35.0% | |
| AAAAATTACTCATGCACTGG+TGG | + | chr3_3:2771512-2771531 | Msa0438520:CDS | 35.0% | |
| TGTTGTTAGGATTTCGGTTA+GGG | - | chr3_3:2771556-2771575 | None:intergenic | 35.0% | |
| ATGTTGTTAGGATTTCGGTT+AGG | - | chr3_3:2771557-2771576 | None:intergenic | 35.0% | |
| CGAAATCCTAACAACATTAC+AGG | + | chr3_3:2771560-2771579 | Msa0438520:CDS | 35.0% | |
| ATTGCTCCTGTAATGTTGTT+AGG | - | chr3_3:2771569-2771588 | None:intergenic | 35.0% | |
| TAACAACATTACAGGAGCAA+TGG | + | chr3_3:2771568-2771587 | Msa0438520:CDS | 35.0% | |
| TATACTGAACCAACTTTAGC+TGG | + | chr3_3:2771644-2771663 | Msa0438520:CDS | 35.0% | |
| ATTTCCTTAACAAGCACAAC+AGG | + | chr3_3:2771692-2771711 | Msa0438520:CDS | 35.0% | |
| TGGTGGAATAGCTTCAAAAA+TGG | - | chr3_3:2771738-2771757 | None:intergenic | 35.0% | |
| ! | TTTGAAGCTATTCCACCATT+TGG | + | chr3_3:2771740-2771759 | Msa0438520:CDS | 35.0% |
| ATTCAAGGAATCAATGGGGA+GGG | + | chr3_3:2766292-2766311 | Msa0438520:CDS | 40.0% | |
| GAAGAAGAAGACCAAGTATG+TGG | + | chr3_3:2766470-2766489 | Msa0438520:CDS | 40.0% | |
| GCATCCAAAATCCACATACT+TGG | - | chr3_3:2766484-2766503 | None:intergenic | 40.0% | |
| !! | TGAGTCACAAGGCATTGAAA+TGG | + | chr3_3:2766511-2766530 | Msa0438520:CDS | 40.0% |
| GTGTAATTATCAGGTGGTGT+AGG | - | chr3_3:2766621-2766640 | None:intergenic | 40.0% | |
| ! | AGAGCAAGGGTGTAATTATC+AGG | - | chr3_3:2766630-2766649 | None:intergenic | 40.0% |
| ! | CTTTTGAATAGGCGTGGTTT+TGG | + | chr3_3:2766958-2766977 | Msa0438520:intron | 40.0% |
| TTATTGAACCAGCCTTTGGA+AGG | - | chr3_3:2767659-2767678 | None:intergenic | 40.0% | |
| TTCCATAAGCACAGTTTCAG+GGG | - | chr3_3:2768009-2768028 | None:intergenic | 40.0% | |
| TGCTTATGGAAAATCCGCTT+AGG | + | chr3_3:2768018-2768037 | Msa0438520:intron | 40.0% | |
| TTTATCGGAAGTTCCTGAAG+GGG | - | chr3_3:2768899-2768918 | None:intergenic | 40.0% | |
| !! | GTACCTTTGATTTGTGAAGC+TGG | + | chr3_3:2769428-2769447 | Msa0438520:intron | 40.0% |
| AGCAATGGAATTTCATGGAG+AGG | + | chr3_3:2769464-2769483 | Msa0438520:CDS | 40.0% | |
| GCAATGGAATTTCATGGAGA+GGG | + | chr3_3:2769465-2769484 | Msa0438520:CDS | 40.0% | |
| !! | GTTGGTGGTTATTATGATGC+AGG | + | chr3_3:2769536-2769555 | Msa0438520:CDS | 40.0% |
| TGGTGGTTATTATGATGCAG+GGG | + | chr3_3:2769538-2769557 | Msa0438520:CDS | 40.0% | |
| TTGCTATGACAATGCTAAGC+TGG | + | chr3_3:2769591-2769610 | Msa0438520:CDS | 40.0% | |
| GCCAGAGAACTCATTAAATG+GGG | + | chr3_3:2769665-2769684 | Msa0438520:CDS | 40.0% | |
| ACCCCATTTAATGAGTTCTC+TGG | - | chr3_3:2769669-2769688 | None:intergenic | 40.0% | |
| GAATACGCGACTTCTTCAAT+AGG | - | chr3_3:2769818-2769837 | None:intergenic | 40.0% | |
| GACAGATGTCACTGTAGTAA+TGG | - | chr3_3:2769967-2769986 | None:intergenic | 40.0% | |
| TTGAATAAGCAGCATCGTCT+AGG | - | chr3_3:2770252-2770271 | None:intergenic | 40.0% | |
| TTGGAATTCTTAGGCACATC+AGG | - | chr3_3:2770469-2770488 | None:intergenic | 40.0% | |
| TGATGTGCCTAAGAATTCCA+AGG | + | chr3_3:2770468-2770487 | Msa0438520:CDS | 40.0% | |
| TGCAATGTTGCTGCTAACAA+GGG | + | chr3_3:2770546-2770565 | Msa0438520:CDS | 40.0% | |
| TAATCCTGGTTACCCTTATG+AGG | + | chr3_3:2770582-2770601 | Msa0438520:CDS | 40.0% | |
| ATATCCTCATAAGGGTAACC+AGG | - | chr3_3:2770589-2770608 | None:intergenic | 40.0% | |
| !! | GGGTTGATACAATTGAACCA+TGG | + | chr3_3:2770774-2770793 | Msa0438520:CDS | 40.0% |
| GCTGATTATATGGAAGCCAA+AGG | + | chr3_3:2770852-2770871 | Msa0438520:CDS | 40.0% | |
| GGCTAATGAGTTTCAATACC+TGG | - | chr3_3:2771110-2771129 | None:intergenic | 40.0% | |
| AGTGCTAGACCATAATTCTC+AGG | - | chr3_3:2771213-2771232 | None:intergenic | 40.0% | |
| ! | ATGGTCTAGCACTCATTTTC+AGG | + | chr3_3:2771220-2771239 | Msa0438520:intron | 40.0% |
| CCTCTATGATGAACATGTCT+TGG | - | chr3_3:2771470-2771489 | None:intergenic | 40.0% | |
| CCAAGACATGTTCATCATAG+AGG | + | chr3_3:2771467-2771486 | Msa0438520:CDS | 40.0% | |
| AACATTACAGGAGCAATGGT+TGG | + | chr3_3:2771572-2771591 | Msa0438520:CDS | 40.0% | |
| ! | ACTACCTGTTGTGCTTGTTA+AGG | - | chr3_3:2771699-2771718 | None:intergenic | 40.0% |
| TTAACAAGCACAACAGGTAG+TGG | + | chr3_3:2771698-2771717 | Msa0438520:CDS | 40.0% | |
| CATTCAAGGAATCAATGGGG+AGG | + | chr3_3:2766291-2766310 | Msa0438520:CDS | 45.0% | |
| ! | CAGCAATAGTGAAGTGCCAT+CGG | + | chr3_3:2766329-2766348 | Msa0438520:CDS | 45.0% |
| ! | AGCAATAGTGAAGTGCCATC+GGG | + | chr3_3:2766330-2766349 | Msa0438520:CDS | 45.0% |
| TGATCATGGTAATCGACGTG+AGG | + | chr3_3:2766401-2766420 | Msa0438520:CDS | 45.0% | |
| GATCATGGTAATCGACGTGA+GGG | + | chr3_3:2766402-2766421 | Msa0438520:CDS | 45.0% | |
| TGGACGAGACATTTCAAAGC+TGG | + | chr3_3:2766427-2766446 | Msa0438520:CDS | 45.0% | |
| ATGCATCGTGTTGAGTCACA+AGG | + | chr3_3:2766500-2766519 | Msa0438520:CDS | 45.0% | |
| CCTTGGCAATGATGATAGGA+AGG | - | chr3_3:2766575-2766594 | None:intergenic | 45.0% | |
| CCTTCCTATCATCATTGCCA+AGG | + | chr3_3:2766572-2766591 | Msa0438520:CDS | 45.0% | |
| ! | GCAAGGGTGTAATTATCAGG+TGG | - | chr3_3:2766627-2766646 | None:intergenic | 45.0% |
| TAGCGCTTTGTGAAGAGCAA+GGG | - | chr3_3:2766643-2766662 | None:intergenic | 45.0% | |
| ! | AAGGAGTTGACGGGTAAAAG+GGG | - | chr3_3:2767640-2767659 | None:intergenic | 45.0% |
| ! | GAAGGAGTTGACGGGTAAAA+GGG | - | chr3_3:2767641-2767660 | None:intergenic | 45.0% |
| TACACATTCGTACACACACG+TGG | + | chr3_3:2767917-2767936 | Msa0438520:intron | 45.0% | |
| ATCCCCTGAAACTGTGCTTA+TGG | + | chr3_3:2768004-2768023 | Msa0438520:intron | 45.0% | |
| TATTTGGCGGAAATCAAGGG+AGG | + | chr3_3:2768725-2768744 | Msa0438520:intron | 45.0% | |
| ACATAACAAGTGTCCCCTTC+AGG | + | chr3_3:2768883-2768902 | Msa0438520:intron | 45.0% | |
| CTCCCAGCTTCACAAATCAA+AGG | - | chr3_3:2769434-2769453 | None:intergenic | 45.0% | |
| ATTTCATGGAGAGGGAACTC+AGG | + | chr3_3:2769473-2769492 | Msa0438520:CDS | 45.0% | |
| GGGAACTCAGGTTTACAAGA+TGG | + | chr3_3:2769485-2769504 | Msa0438520:CDS | 45.0% | |
| ATGGGATGCAGAACTGTTGA+AGG | - | chr3_3:2769711-2769730 | None:intergenic | 45.0% | |
| !! | TAGGTTGGTGGATCACTGAA+TGG | + | chr3_3:2770088-2770107 | Msa0438520:intron | 45.0% |
| GTGGATCACTGAATGGTTCT+AGG | + | chr3_3:2770095-2770114 | Msa0438520:CDS | 45.0% | |
| CACCAGATGATCACTACTGT+TGG | + | chr3_3:2770119-2770138 | Msa0438520:CDS | 45.0% | |
| TGCCAACAGTAGTGATCATC+TGG | - | chr3_3:2770124-2770143 | None:intergenic | 45.0% | |
| ! | AATACAGTTGTTGTTGGGCG+TGG | - | chr3_3:2770169-2770188 | None:intergenic | 45.0% |
| TTTGATGAGTACATGTGGGG+TGG | + | chr3_3:2770388-2770407 | Msa0438520:CDS | 45.0% | |
| ! | GCTTGGTTGTATTTTGCCAC+TGG | + | chr3_3:2770412-2770431 | Msa0438520:CDS | 45.0% |
| !! | CACATCAGGATTAGTTGCCA+AGG | - | chr3_3:2770455-2770474 | None:intergenic | 45.0% |
| CTGCAATGTTGCTGCTAACA+AGG | + | chr3_3:2770545-2770564 | Msa0438520:CDS | 45.0% | |
| TGTTGCTGCTAACAAGGGTT+AGG | + | chr3_3:2770551-2770570 | Msa0438520:CDS | 45.0% | |
| ATACCATCCAGGAACACCTT+TGG | - | chr3_3:2770871-2770890 | None:intergenic | 45.0% | |
| TTAGGACCACAATACCATCC+AGG | - | chr3_3:2770882-2770901 | None:intergenic | 45.0% | |
| !! | AAAGGCATTTGCAACCTCTC+AGG | + | chr3_3:2770923-2770942 | Msa0438520:CDS | 45.0% |
| TGACGAATTTGGTACCTGAG+AGG | - | chr3_3:2770940-2770959 | None:intergenic | 45.0% | |
| ! | ATTACTCATGCACTGGTGGT+TGG | + | chr3_3:2771516-2771535 | Msa0438520:CDS | 45.0% |
| ATTACAGGAGCAATGGTTGG+AGG | + | chr3_3:2771575-2771594 | Msa0438520:CDS | 45.0% | |
| CCTGCATTTCCAGCTAAAGT+TGG | - | chr3_3:2771656-2771675 | None:intergenic | 45.0% | |
| CCAACTTTAGCTGGAAATGC+AGG | + | chr3_3:2771653-2771672 | Msa0438520:CDS | 45.0% | |
| !! | GGATTTTCTGGTCCAAATGG+TGG | - | chr3_3:2771755-2771774 | None:intergenic | 45.0% |
| !! | GGTGGATTTTCTGGTCCAAA+TGG | - | chr3_3:2771758-2771777 | None:intergenic | 45.0% |
| !!! | TTTTTCATTTATAATATTAA+GGG | - | chr3_3:2767373-2767392 | None:intergenic | 5.0% |
| TGCCTTGTCCCATTGATCTC+CGG | - | chr3_3:2766373-2766392 | None:intergenic | 50.0% | |
| AAGGCAGCGTTGCTTGATCA+TGG | + | chr3_3:2766387-2766406 | Msa0438520:CDS | 50.0% | |
| TGGTAATCGACGTGAGGGAT+TGG | + | chr3_3:2766407-2766426 | Msa0438520:CDS | 50.0% | |
| GTAGCGCTTTGTGAAGAGCA+AGG | - | chr3_3:2766644-2766663 | None:intergenic | 50.0% | |
| CAAGGGTCGGGTTTAAACTC+TGG | - | chr3_3:2767249-2767268 | None:intergenic | 50.0% | |
| ! | GGAAGGAGTTGACGGGTAAA+AGG | - | chr3_3:2767642-2767661 | None:intergenic | 50.0% |
| TACCCGTCAACTCCTTCCAA+AGG | + | chr3_3:2767644-2767663 | Msa0438520:intron | 50.0% | |
| ! | AGCCTTTGGAAGGAGTTGAC+GGG | - | chr3_3:2767649-2767668 | None:intergenic | 50.0% |
| ! | CAGCCTTTGGAAGGAGTTGA+CGG | - | chr3_3:2767650-2767669 | None:intergenic | 50.0% |
| GGGCTTATTGAACCAGCCTT+TGG | - | chr3_3:2767663-2767682 | None:intergenic | 50.0% | |
| GCGGAAATCAAGGGAGGTAA+TGG | + | chr3_3:2768731-2768750 | Msa0438520:intron | 50.0% | |
| GGGAGATTGCCAAAGAGCAA+TGG | + | chr3_3:2769449-2769468 | Msa0438520:CDS | 50.0% | |
| CGTGGATAGCTCATGTCTTC+TGG | - | chr3_3:2770151-2770170 | None:intergenic | 50.0% | |
| TTTGAAGGACCTGACCTTGC+AGG | + | chr3_3:2770187-2770206 | Msa0438520:CDS | 50.0% | |
| ACCTGACCTTGCAGGAGAAA+TGG | + | chr3_3:2770195-2770214 | Msa0438520:CDS | 50.0% | |
| GTTAGCAGCAACATTGCAGC+CGG | - | chr3_3:2770544-2770563 | None:intergenic | 50.0% | |
| GGAGAGATTGTGGTTGTCCA+TGG | - | chr3_3:2770794-2770813 | None:intergenic | 50.0% | |
| !! | ATGGAAGCCAAAGGTGTTCC+TGG | + | chr3_3:2770861-2770880 | Msa0438520:CDS | 50.0% |
| !! | AAGCCAAAGGTGTTCCTGGA+TGG | + | chr3_3:2770865-2770884 | Msa0438520:CDS | 50.0% |
| GGTGTTCCTGGATGGTATTG+TGG | + | chr3_3:2770873-2770892 | Msa0438520:CDS | 50.0% | |
| TGTCCCATTGATCTCCGGTG+CGG | - | chr3_3:2766368-2766387 | None:intergenic | 55.0% | |
| CACCGGAGATCAATGGGACA+AGG | + | chr3_3:2766368-2766387 | Msa0438520:CDS | 55.0% | |
| CGTCAACTCCTTCCAAAGGC+TGG | + | chr3_3:2767648-2767667 | Msa0438520:intron | 55.0% | |
| GCCATTTCTCCTGCAAGGTC+AGG | - | chr3_3:2770199-2770218 | None:intergenic | 55.0% | |
| ! | CTGCTGCCATTTCTCCTGCA+AGG | - | chr3_3:2770204-2770223 | None:intergenic | 55.0% |
| AGTACATGTGGGGTGGTGCT+TGG | + | chr3_3:2770395-2770414 | Msa0438520:CDS | 55.0% | |
| ! | CATGCACTGGTGGTTGGAAG+TGG | + | chr3_3:2771522-2771541 | Msa0438520:CDS | 55.0% |
| !!! | GGTGGTGGAGGTGGATTTTC+TGG | - | chr3_3:2771767-2771786 | None:intergenic | 55.0% |
| CATGGTTTCCAAGGAGGTGG+TGG | - | chr3_3:2771782-2771801 | None:intergenic | 55.0% | |
| CAGCCGCACCGGAGATCAAT+GGG | + | chr3_3:2766362-2766381 | Msa0438520:CDS | 60.0% | |
| ATCCACCTCCACCACCTCCT+TGG | + | chr3_3:2771771-2771790 | Msa0438520:CDS | 60.0% | |
| !! | TTCCAAGGAGGTGGTGGAGG+TGG | - | chr3_3:2771776-2771795 | None:intergenic | 60.0% |
| ! | GGTTTCCAAGGAGGTGGTGG+AGG | - | chr3_3:2771779-2771798 | None:intergenic | 60.0% |
| CCATTGATCTCCGGTGCGGC+TGG | - | chr3_3:2766364-2766383 | None:intergenic | 65.0% | |
| CCAGCCGCACCGGAGATCAA+TGG | + | chr3_3:2766361-2766380 | Msa0438520:CDS | 65.0% | |
| !! | CGGCTGGTCTCATCGCCCGA+TGG | - | chr3_3:2766348-2766367 | None:intergenic | 70.0% |
| GGCGATGAGACCAGCCGCAC+CGG | + | chr3_3:2766351-2766370 | Msa0438520:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 2766288 | 2771802 | 2766288 | ID=Msa0438520;Name=Msa0438520 |
| chr3_3 | mRNA | 2766288 | 2771802 | 2766288 | ID=Msa0438520-mRNA-1;Parent=Msa0438520;Name=Msa0438520-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0|0|1|1|1|5|0|635 |
| chr3_3 | exon | 2766288 | 2766684 | 2766288 | ID=Msa0438520-mRNA-1:exon:644;Parent=Msa0438520-mRNA-1 |
| chr3_3 | exon | 2769447 | 2769751 | 2769447 | ID=Msa0438520-mRNA-1:exon:645;Parent=Msa0438520-mRNA-1 |
| chr3_3 | exon | 2770091 | 2770688 | 2770091 | ID=Msa0438520-mRNA-1:exon:646;Parent=Msa0438520-mRNA-1 |
| chr3_3 | exon | 2770772 | 2770944 | 2770772 | ID=Msa0438520-mRNA-1:exon:647;Parent=Msa0438520-mRNA-1 |
| chr3_3 | exon | 2771368 | 2771802 | 2771368 | ID=Msa0438520-mRNA-1:exon:648;Parent=Msa0438520-mRNA-1 |
| chr3_3 | CDS | 2766288 | 2766684 | 2766288 | ID=Msa0438520-mRNA-1:cds;Parent=Msa0438520-mRNA-1 |
| chr3_3 | CDS | 2769447 | 2769751 | 2769447 | ID=Msa0438520-mRNA-1:cds;Parent=Msa0438520-mRNA-1 |
| chr3_3 | CDS | 2770091 | 2770688 | 2770091 | ID=Msa0438520-mRNA-1:cds;Parent=Msa0438520-mRNA-1 |
| chr3_3 | CDS | 2770772 | 2770944 | 2770772 | ID=Msa0438520-mRNA-1:cds;Parent=Msa0438520-mRNA-1 |
| chr3_3 | CDS | 2771368 | 2771802 | 2771368 | ID=Msa0438520-mRNA-1:cds;Parent=Msa0438520-mRNA-1 |
| Gene Sequence |
| Protein sequence |
