Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466130 | XP_003590826.1 | 98.450 | 387 | 6 | 0 | 9 | 395 | 312 | 698 | 0.0 | 801 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466130 | sp|Q8S403|PHO1_ARATH | 71.503 | 386 | 110 | 0 | 9 | 394 | 322 | 707 | 0.0 | 617 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466130 | A0A396JVW9 | 98.705 | 386 | 5 | 0 | 9 | 394 | 365 | 750 | 0.0 | 801 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012380 | Msa1466130 | -0.822117 | 2.811432e-53 | -8.615850e-47 |
| Msa0019570 | Msa1466130 | 0.802100 | 6.583580e-49 | -8.615850e-47 |
| Msa0024900 | Msa1466130 | -0.820306 | 7.353468e-53 | -8.615850e-47 |
| Msa0030090 | Msa1466130 | 0.848157 | 7.328134e-60 | -8.615850e-47 |
| Msa0036550 | Msa1466130 | 0.834235 | 3.369306e-56 | -8.615850e-47 |
| Msa0037270 | Msa1466130 | -0.810048 | 1.398850e-50 | -8.615850e-47 |
| Msa0044180 | Msa1466130 | -0.804879 | 1.747479e-49 | -8.615850e-47 |
| Msa0072390 | Msa1466130 | -0.800179 | 1.627494e-48 | -8.615850e-47 |
| Msa0081120 | Msa1466130 | -0.831091 | 2.031200e-55 | -8.615850e-47 |
| Msa0081790 | Msa1466130 | -0.808290 | 3.330839e-50 | -8.615850e-47 |
| Msa0084390 | Msa1466130 | 0.826394 | 2.779099e-54 | -8.615850e-47 |
| Msa0089510 | Msa1466130 | -0.808051 | 3.745238e-50 | -8.615850e-47 |
| Msa0089520 | Msa1466130 | -0.808164 | 3.543608e-50 | -8.615850e-47 |
| Msa0101170 | Msa1466130 | 0.835968 | 1.231703e-56 | -8.615850e-47 |
| Msa0114700 | Msa1466130 | -0.804128 | 2.505999e-49 | -8.615850e-47 |
| Msa0120450 | Msa1466130 | 0.810735 | 9.943679e-51 | -8.615850e-47 |
| Msa1348330 | Msa1466130 | 0.810625 | 1.050267e-50 | -8.615850e-47 |
| Msa1349810 | Msa1466130 | -0.829771 | 4.270750e-55 | -8.615850e-47 |
| Msa1355340 | Msa1466130 | 0.807112 | 5.925286e-50 | -8.615850e-47 |
| Msa1358340 | Msa1466130 | -0.820876 | 5.439183e-53 | -8.615850e-47 |
| Msa1359890 | Msa1466130 | -0.865309 | 6.484921e-65 | -8.615850e-47 |
| Msa1363690 | Msa1466130 | 0.800102 | 1.687351e-48 | -8.615850e-47 |
| Msa1369180 | Msa1466130 | -0.816170 | 6.348804e-52 | -8.615850e-47 |
| Msa1370930 | Msa1466130 | 0.803247 | 3.819163e-49 | -8.615850e-47 |
| Msa1373390 | Msa1466130 | -0.813761 | 2.173468e-51 | -8.615850e-47 |
| Msa1375780 | Msa1466130 | -0.823820 | 1.127373e-53 | -8.615850e-47 |
| Msa1378950 | Msa1466130 | 0.818386 | 2.014295e-52 | -8.615850e-47 |
| Msa1387480 | Msa1466130 | 0.921708 | 2.528825e-88 | -8.615850e-47 |
| Msa1395720 | Msa1466130 | 0.834117 | 3.607238e-56 | -8.615850e-47 |
| Msa1396550 | Msa1466130 | 0.809573 | 1.769743e-50 | -8.615850e-47 |
| Msa1405380 | Msa1466130 | -0.838108 | 3.496822e-57 | -8.615850e-47 |
| Msa1411550 | Msa1466130 | 0.816077 | 6.659223e-52 | -8.615850e-47 |
| Msa1441450 | Msa1466130 | 0.918190 | 2.116024e-86 | -8.615850e-47 |
| Msa1445780 | Msa1466130 | 0.830841 | 2.340227e-55 | -8.615850e-47 |
| Msa1450630 | Msa1466130 | -0.838364 | 3.004960e-57 | -8.615850e-47 |
| Msa1456620 | Msa1466130 | -0.802605 | 5.181322e-49 | -8.615850e-47 |
| Msa1458270 | Msa1466130 | 0.801334 | 9.456793e-49 | -8.615850e-47 |
| Msa1459540 | Msa1466130 | -0.808731 | 2.681305e-50 | -8.615850e-47 |
| Msa1462600 | Msa1466130 | -0.801971 | 6.999132e-49 | -8.615850e-47 |
| Msa1466130 | Msa1466350 | -0.816656 | 4.941249e-52 | -8.615850e-47 |
| Msa0604880 | Msa1466130 | -0.849638 | 2.843141e-60 | -8.615850e-47 |
| Msa0608780 | Msa1466130 | -0.813011 | 3.176836e-51 | -8.615850e-47 |
| Msa0622250 | Msa1466130 | -0.828801 | 7.343790e-55 | -8.615850e-47 |
| Msa0627050 | Msa1466130 | -0.825557 | 4.393634e-54 | -8.615850e-47 |
| Msa0644630 | Msa1466130 | -0.834551 | 2.807430e-56 | -8.615850e-47 |
| Msa0646190 | Msa1466130 | -0.864405 | 1.245345e-64 | -8.615850e-47 |
| Msa0649250 | Msa1466130 | -0.800697 | 1.276050e-48 | -8.615850e-47 |
| Msa0651310 | Msa1466130 | -0.807178 | 5.737284e-50 | -8.615850e-47 |
| Msa0667010 | Msa1466130 | 0.804441 | 2.157416e-49 | -8.615850e-47 |
| Msa0679780 | Msa1466130 | -0.809409 | 1.919180e-50 | -8.615850e-47 |
| Msa0690190 | Msa1466130 | 0.817254 | 3.627986e-52 | -8.615850e-47 |
| Msa0701460 | Msa1466130 | -0.811445 | 6.976535e-51 | -8.615850e-47 |
| Msa0701530 | Msa1466130 | -0.820553 | 6.455479e-53 | -8.615850e-47 |
| Msa0705810 | Msa1466130 | -0.825871 | 3.700338e-54 | -8.615850e-47 |
| Msa0742090 | Msa1466130 | -0.841939 | 3.503999e-58 | -8.615850e-47 |
| Msa0748330 | Msa1466130 | -0.825423 | 4.724946e-54 | -8.615850e-47 |
| Msa0758150 | Msa1466130 | 0.800739 | 1.251472e-48 | -8.615850e-47 |
| Msa0793100 | Msa1466130 | -0.842239 | 2.918835e-58 | -8.615850e-47 |
| Msa0798240 | Msa1466130 | 0.801473 | 8.857375e-49 | -8.615850e-47 |
| Msa0813630 | Msa1466130 | -0.812989 | 3.211228e-51 | -8.615850e-47 |
| Msa0817100 | Msa1466130 | 0.809670 | 1.686677e-50 | -8.615850e-47 |
| Msa0823310 | Msa1466130 | -0.823326 | 1.470971e-53 | -8.615850e-47 |
| Msa0839040 | Msa1466130 | 0.808452 | 3.076455e-50 | -8.615850e-47 |
| Msa0125600 | Msa1466130 | 0.928704 | 1.979910e-92 | -8.615850e-47 |
| Msa0130710 | Msa1466130 | 0.846683 | 1.862052e-59 | -8.615850e-47 |
| Msa0137010 | Msa1466130 | -0.826815 | 2.205079e-54 | -8.615850e-47 |
| Msa0154240 | Msa1466130 | -0.813584 | 2.376940e-51 | -8.615850e-47 |
| Msa0163970 | Msa1466130 | 0.812186 | 4.813090e-51 | -8.615850e-47 |
| Msa0170080 | Msa1466130 | 0.848190 | 7.176331e-60 | -8.615850e-47 |
| Msa0170760 | Msa1466130 | 0.803541 | 3.318205e-49 | -8.615850e-47 |
| Msa0176600 | Msa1466130 | 0.846976 | 1.548586e-59 | -8.615850e-47 |
| Msa0179830 | Msa1466130 | 0.820808 | 5.638683e-53 | -8.615850e-47 |
| Msa0187980 | Msa1466130 | -0.814471 | 1.515067e-51 | -8.615850e-47 |
| Msa0190670 | Msa1466130 | 0.801176 | 1.018670e-48 | -8.615850e-47 |
| Msa0212730 | Msa1466130 | -0.802468 | 5.530260e-49 | -8.615850e-47 |
| Msa0216220 | Msa1466130 | -0.802897 | 4.511021e-49 | -8.615850e-47 |
| Msa0224400 | Msa1466130 | -0.804185 | 2.438881e-49 | -8.615850e-47 |
| Msa1228350 | Msa1466130 | -0.842089 | 3.198190e-58 | -8.615850e-47 |
| Msa1228460 | Msa1466130 | -0.838145 | 3.422587e-57 | -8.615850e-47 |
| Msa1236860 | Msa1466130 | -0.823525 | 1.321627e-53 | -8.615850e-47 |
| Msa1255020 | Msa1466130 | -0.846747 | 1.788990e-59 | -8.615850e-47 |
| Msa1255710 | Msa1466130 | 0.810311 | 1.227438e-50 | -8.615850e-47 |
| Msa1263520 | Msa1466130 | 0.803541 | 3.318619e-49 | -8.615850e-47 |
| Msa1272340 | Msa1466130 | -0.805274 | 1.444540e-49 | -8.615850e-47 |
| Msa1295470 | Msa1466130 | -0.841031 | 6.080889e-58 | -8.615850e-47 |
| Msa1310250 | Msa1466130 | -0.809326 | 1.999539e-50 | -8.615850e-47 |
| Msa1317240 | Msa1466130 | -0.817578 | 3.067118e-52 | -8.615850e-47 |
| Msa0371510 | Msa1466130 | 0.816482 | 5.406268e-52 | -8.615850e-47 |
| Msa0373220 | Msa1466130 | -0.813967 | 1.957398e-51 | -8.615850e-47 |
| Msa0392050 | Msa1466130 | -0.822051 | 2.912964e-53 | -8.615850e-47 |
| Msa0392540 | Msa1466130 | -0.810567 | 1.080783e-50 | -8.615850e-47 |
| Msa0396860 | Msa1466130 | 0.819074 | 1.405628e-52 | -8.615850e-47 |
| Msa0404060 | Msa1466130 | -0.827173 | 1.810847e-54 | -8.615850e-47 |
| Msa0404070 | Msa1466130 | -0.850346 | 1.802067e-60 | -8.615850e-47 |
| Msa0419860 | Msa1466130 | 0.804017 | 2.642654e-49 | -8.615850e-47 |
| Msa0428330 | Msa1466130 | -0.818629 | 1.773720e-52 | -8.615850e-47 |
| Msa0430040 | Msa1466130 | -0.801420 | 9.079597e-49 | -8.615850e-47 |
| Msa0440310 | Msa1466130 | -0.803654 | 3.145089e-49 | -8.615850e-47 |
| Msa0450030 | Msa1466130 | 0.812534 | 4.038585e-51 | -8.615850e-47 |
| Msa0468020 | Msa1466130 | -0.813694 | 2.248546e-51 | -8.615850e-47 |
| Msa0469950 | Msa1466130 | -0.823696 | 1.205348e-53 | -8.615850e-47 |
| Msa0477900 | Msa1466130 | 0.803480 | 3.417424e-49 | -8.615850e-47 |
| Msa0480430 | Msa1466130 | -0.807178 | 5.739451e-50 | -8.615850e-47 |
| Msa0984000 | Msa1466130 | -0.818807 | 1.616841e-52 | -8.615850e-47 |
| Msa1004720 | Msa1466130 | -0.807067 | 6.058113e-50 | -8.615850e-47 |
| Msa1019220 | Msa1466130 | 0.811192 | 7.917461e-51 | -8.615850e-47 |
| Msa1019230 | Msa1466130 | 0.806685 | 7.294952e-50 | -8.615850e-47 |
| Msa1024420 | Msa1466130 | 0.805353 | 1.390542e-49 | -8.615850e-47 |
| Msa1030430 | Msa1466130 | -0.811361 | 7.277201e-51 | -8.615850e-47 |
| Msa1036020 | Msa1466130 | 0.812997 | 3.199133e-51 | -8.615850e-47 |
| Msa1040730 | Msa1466130 | 0.809037 | 2.306640e-50 | -8.615850e-47 |
| Msa1053690 | Msa1466130 | -0.802458 | 5.556766e-49 | -8.615850e-47 |
| Msa1063260 | Msa1466130 | 0.801439 | 8.998916e-49 | -8.615850e-47 |
| Msa1064940 | Msa1466130 | 0.810365 | 1.194989e-50 | -8.615850e-47 |
| Msa1076280 | Msa1466130 | 0.832033 | 1.190556e-55 | -8.615850e-47 |
| Msa1082150 | Msa1466130 | -0.803733 | 3.028178e-49 | -8.615850e-47 |
| Msa1083130 | Msa1466130 | 0.808312 | 3.293975e-50 | -8.615850e-47 |
| Msa1101300 | Msa1466130 | -0.805723 | 1.163121e-49 | -8.615850e-47 |
| Msa1104130 | Msa1466130 | 0.805389 | 1.366769e-49 | -8.615850e-47 |
| Msa0238860 | Msa1466130 | -0.818839 | 1.590023e-52 | -8.615850e-47 |
| Msa0253160 | Msa1466130 | -0.873314 | 1.618809e-67 | -8.615850e-47 |
| Msa0260190 | Msa1466130 | -0.807094 | 5.978336e-50 | -8.615850e-47 |
| Msa0269240 | Msa1466130 | 0.932552 | 7.172055e-95 | -8.615850e-47 |
| Msa0274250 | Msa1466130 | 0.806523 | 7.892007e-50 | -8.615850e-47 |
| Msa0279810 | Msa1466130 | 0.811700 | 6.139223e-51 | -8.615850e-47 |
| Msa0291940 | Msa1466130 | -0.875334 | 3.344124e-68 | -8.615850e-47 |
| Msa0295570 | Msa1466130 | -0.828263 | 9.907018e-55 | -8.615850e-47 |
| Msa0303440 | Msa1466130 | -0.808889 | 2.480389e-50 | -8.615850e-47 |
| Msa0303500 | Msa1466130 | -0.804043 | 2.610970e-49 | -8.615850e-47 |
| Msa0303920 | Msa1466130 | 0.805780 | 1.131789e-49 | -8.615850e-47 |
| Msa0316610 | Msa1466130 | -0.813945 | 1.979734e-51 | -8.615850e-47 |
| Msa0319220 | Msa1466130 | 0.809759 | 1.614515e-50 | -8.615850e-47 |
| Msa0329910 | Msa1466130 | -0.841980 | 3.418441e-58 | -8.615850e-47 |
| Msa0344680 | Msa1466130 | -0.824025 | 1.009164e-53 | -8.615850e-47 |
| Msa0349910 | Msa1466130 | 0.813447 | 2.548194e-51 | -8.615850e-47 |
| Msa1133440 | Msa1466130 | -0.828366 | 9.358617e-55 | -8.615850e-47 |
| Msa1144730 | Msa1466130 | -0.821424 | 4.067968e-53 | -8.615850e-47 |
| Msa1148210 | Msa1466130 | 0.800178 | 1.628100e-48 | -8.615850e-47 |
| Msa1152330 | Msa1466130 | 0.807914 | 4.004967e-50 | -8.615850e-47 |
| Msa1173380 | Msa1466130 | -0.803755 | 2.996031e-49 | -8.615850e-47 |
| Msa1184010 | Msa1466130 | -0.835241 | 1.881349e-56 | -8.615850e-47 |
| Msa1215220 | Msa1466130 | -0.817018 | 4.097907e-52 | -8.615850e-47 |
| Msa1219060 | Msa1466130 | -0.831051 | 2.078020e-55 | -8.615850e-47 |
| Msa1223620 | Msa1466130 | 0.812428 | 4.261438e-51 | -8.615850e-47 |
| Msa0500490 | Msa1466130 | -0.804682 | 1.920836e-49 | -8.615850e-47 |
| Msa0524830 | Msa1466130 | -0.822820 | 1.930616e-53 | -8.615850e-47 |
| Msa0524960 | Msa1466130 | -0.808285 | 3.339086e-50 | -8.615850e-47 |
| Msa0525270 | Msa1466130 | -0.807028 | 6.174695e-50 | -8.615850e-47 |
| Msa0530340 | Msa1466130 | -0.808853 | 2.524663e-50 | -8.615850e-47 |
| Msa0532210 | Msa1466130 | 0.804533 | 2.064254e-49 | -8.615850e-47 |
| Msa0545230 | Msa1466130 | -0.821246 | 4.472018e-53 | -8.615850e-47 |
| Msa0548210 | Msa1466130 | -0.803281 | 3.756165e-49 | -8.615850e-47 |
| Msa0549540 | Msa1466130 | -0.846584 | 1.981009e-59 | -8.615850e-47 |
| Msa0556070 | Msa1466130 | -0.812455 | 4.203629e-51 | -8.615850e-47 |
| Msa0575380 | Msa1466130 | 0.822374 | 2.451231e-53 | -8.615850e-47 |
| Msa0600820 | Msa1466130 | -0.812801 | 3.531129e-51 | -8.615850e-47 |
| Msa0879650 | Msa1466130 | -0.811620 | 6.392813e-51 | -8.615850e-47 |
| Msa0884840 | Msa1466130 | -0.805759 | 1.142864e-49 | -8.615850e-47 |
| Msa0896910 | Msa1466130 | 0.802963 | 4.371993e-49 | -8.615850e-47 |
| Msa0912110 | Msa1466130 | -0.800061 | 1.719490e-48 | -8.615850e-47 |
| Msa0924490 | Msa1466130 | 0.816324 | 5.864396e-52 | -8.615850e-47 |
| Msa0930210 | Msa1466130 | 0.806654 | 7.407499e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466130 | MtrunA17_Chr1g0187381 | 98.705 | 386 | 5 | 0 | 9 | 394 | 365 | 750 | 0.0 | 801 |
| Msa1466130 | MtrunA17_Chr1g0166651 | 82.383 | 386 | 68 | 0 | 9 | 394 | 313 | 698 | 0.0 | 673 |
| Msa1466130 | MtrunA17_Chr8g0368741 | 55.026 | 378 | 169 | 1 | 19 | 395 | 329 | 706 | 1.15e-149 | 442 |
| Msa1466130 | MtrunA17_Chr5g0417841 | 34.794 | 388 | 249 | 2 | 11 | 395 | 293 | 679 | 5.45e-83 | 269 |
| Msa1466130 | MtrunA17_Chr2g0302531 | 35.817 | 416 | 231 | 7 | 9 | 395 | 310 | 718 | 3.39e-79 | 259 |
| Msa1466130 | MtrunA17_Chr7g0217801 | 36.224 | 392 | 243 | 4 | 9 | 395 | 313 | 702 | 1.69e-76 | 252 |
| Msa1466130 | MtrunA17_Chr7g0217771 | 35.401 | 274 | 171 | 3 | 126 | 395 | 1 | 272 | 1.56e-55 | 187 |
| Msa1466130 | MtrunA17_Chr7g0217821 | 32.482 | 274 | 180 | 3 | 126 | 395 | 1 | 273 | 2.05e-46 | 162 |
| Msa1466130 | MtrunA17_Chr7g0246941 | 28.383 | 303 | 191 | 10 | 74 | 366 | 37 | 323 | 4.81e-26 | 108 |
| Msa1466130 | MtrunA17_Chr2g0322931 | 27.338 | 278 | 180 | 9 | 101 | 366 | 91 | 358 | 5.21e-25 | 106 |
| Msa1466130 | MtrunA17_Chr7g0217781 | 47.826 | 69 | 36 | 0 | 9 | 77 | 119 | 187 | 8.68e-13 | 67.0 |
| Msa1466130 | MtrunA17_Chr7g0217831 | 47.826 | 69 | 36 | 0 | 9 | 77 | 309 | 377 | 7.39e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1466130 | AT3G23430.1 | 71.503 | 386 | 110 | 0 | 9 | 394 | 322 | 707 | 0.0 | 617 |
| Msa1466130 | AT1G68740.2 | 53.439 | 378 | 175 | 1 | 19 | 395 | 333 | 710 | 3.59e-140 | 417 |
| Msa1466130 | AT1G68740.1 | 53.439 | 378 | 175 | 1 | 19 | 395 | 333 | 710 | 2.80e-139 | 416 |
| Msa1466130 | AT3G29060.1 | 35.714 | 392 | 247 | 2 | 9 | 396 | 334 | 724 | 1.51e-90 | 290 |
| Msa1466130 | AT1G14040.1 | 35.038 | 391 | 249 | 3 | 9 | 395 | 347 | 736 | 5.83e-85 | 276 |
| Msa1466130 | AT1G26730.2 | 37.179 | 390 | 240 | 3 | 9 | 395 | 286 | 673 | 3.17e-84 | 271 |
| Msa1466130 | AT1G35350.2 | 36.641 | 393 | 238 | 4 | 9 | 395 | 103 | 490 | 3.64e-84 | 268 |
| Msa1466130 | AT1G26730.1 | 37.179 | 390 | 240 | 3 | 9 | 395 | 286 | 673 | 1.38e-83 | 271 |
| Msa1466130 | AT1G69480.2 | 35.623 | 393 | 245 | 5 | 8 | 395 | 309 | 698 | 2.52e-82 | 268 |
| Msa1466130 | AT1G69480.1 | 35.623 | 393 | 245 | 5 | 8 | 395 | 309 | 698 | 2.52e-82 | 268 |
| Msa1466130 | AT1G35350.1 | 36.641 | 393 | 238 | 4 | 9 | 395 | 287 | 674 | 3.35e-82 | 267 |
| Msa1466130 | AT4G25350.1 | 34.872 | 390 | 251 | 1 | 9 | 395 | 278 | 667 | 8.57e-80 | 261 |
| Msa1466130 | AT2G03260.2 | 33.753 | 397 | 251 | 4 | 9 | 395 | 123 | 517 | 6.34e-79 | 254 |
| Msa1466130 | AT2G03240.1 | 33.333 | 393 | 254 | 4 | 9 | 395 | 356 | 746 | 3.36e-77 | 255 |
| Msa1466130 | AT2G03250.1 | 33.081 | 396 | 255 | 4 | 9 | 396 | 291 | 684 | 3.63e-77 | 253 |
| Msa1466130 | AT2G03260.1 | 33.753 | 397 | 251 | 4 | 9 | 395 | 336 | 730 | 4.13e-77 | 254 |
| Msa1466130 | AT2G03250.2 | 32.550 | 298 | 195 | 3 | 9 | 302 | 291 | 586 | 2.03e-52 | 184 |
| Msa1466130 | AT5G35730.1 | 27.451 | 255 | 169 | 8 | 121 | 366 | 102 | 349 | 2.05e-22 | 99.4 |
| Msa1466130 | AT2G32295.1 | 26.848 | 257 | 168 | 8 | 121 | 366 | 98 | 345 | 4.27e-22 | 98.2 |
| Msa1466130 | AT2G32295.2 | 26.848 | 257 | 168 | 8 | 121 | 366 | 98 | 345 | 4.27e-22 | 98.2 |
Find 73 sgRNAs with CRISPR-Local
Find 167 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCCTCAAAACAACGTTTA+AGG | 0.208521 | tig0046033:-2945 | Msa1466130:intergenic |
| TTGAAGTTTACCTTATAAAA+TGG | 0.247316 | tig0046033:-2030 | Msa1466130:intergenic |
| ATCTCTAAGCCATGGATTTC+TGG | 0.248145 | tig0046033:-2774 | Msa1466130:intergenic |
| GGCGAAGTGCTTTGTGAATA+TGG | 0.251631 | tig0046033:-662 | Msa1466130:intergenic |
| ACTTTCCCATGTTAGCTAAA+TGG | 0.256879 | tig0046033:-2595 | Msa1466130:intergenic |
| TGCAACCACAGTTGTCATTA+AGG | 0.280099 | tig0046033:-1689 | Msa1466130:intergenic |
| TTGTTCTCTTCCACATATAT+AGG | 0.297573 | tig0046033:-1588 | Msa1466130:intergenic |
| TCACTCTGGAAGACTGTATA+TGG | 0.300089 | tig0046033:+2390 | Msa1466130:CDS |
| GATTCCATTGCTAAGGCATT+TGG | 0.302519 | tig0046033:+2309 | Msa1466130:intron |
| ATGAGAATCTTTATGTTGTT+GGG | 0.307349 | tig0046033:-722 | Msa1466130:intergenic |
| CGCCAACAATGACAGGAAAA+AGG | 0.314572 | tig0046033:+681 | Msa1466130:CDS |
| TTGCAGGAAGTGCATCAATT+TGG | 0.321566 | tig0046033:-1759 | Msa1466130:intergenic |
| TATCCTTTATGCCATATTAC+TGG | 0.324399 | tig0046033:+2428 | Msa1466130:CDS |
| TGCATAGCACGCCAGTAATA+TGG | 0.326358 | tig0046033:-2439 | Msa1466130:intergenic |
| CAACCACTTATCAACTCTAT+TGG | 0.357066 | tig0046033:+2714 | Msa1466130:CDS |
| AACCACTTATCAACTCTATT+GGG | 0.370941 | tig0046033:+2715 | Msa1466130:CDS |
| TTATTAGGTTCTTAGACTAA+TGG | 0.374210 | tig0046033:+627 | Msa1466130:intron |
| CCTTATCAGAACTAACGAAA+TGG | 0.375830 | tig0046033:-149 | Msa1466130:intergenic |
| TATGAGAATCTTTATGTTGT+TGG | 0.379645 | tig0046033:-723 | Msa1466130:intergenic |
| TATGCTTAAGTGATGTCCTT+GGG | 0.382707 | tig0046033:-1642 | Msa1466130:intergenic |
| TCCTTTGCAGGGTTGTCTAC+AGG | 0.395365 | tig0046033:+1230 | Msa1466130:intron |
| CCATTTCGTTAGTTCTGATA+AGG | 0.398330 | tig0046033:+149 | Msa1466130:CDS |
| AACTACTAGTTGTAACCTAT+TGG | 0.410734 | tig0046033:+2333 | Msa1466130:CDS |
| CTTCCAGAGTGACAAGTCTC+AGG | 0.411067 | tig0046033:-2379 | Msa1466130:intergenic |
| AGCCTGCACTTATTTATGTA+TGG | 0.411360 | tig0046033:+1559 | Msa1466130:CDS |
| ACTTCCTGCAATATTACTTC+TGG | 0.423000 | tig0046033:+1771 | Msa1466130:CDS |
| AGCCATGGATTTCTGGAGTT+AGG | 0.425098 | tig0046033:-2767 | Msa1466130:intergenic |
| CTAACCAGAAGTAATATTGC+AGG | 0.460005 | tig0046033:-1775 | Msa1466130:intergenic |
| CTTATCAGAACTAACGAAAT+GGG | 0.470046 | tig0046033:-148 | Msa1466130:intergenic |
| ACGCCAGTAATATGGCATAA+AGG | 0.471665 | tig0046033:-2431 | Msa1466130:intergenic |
| GGATGAAACAGTAGCGGGTC+GGG | 0.473616 | tig0046033:-1981 | Msa1466130:intergenic |
| TAACATGGGAAAGTATGTTT+CGG | 0.489749 | tig0046033:+2604 | Msa1466130:CDS |
| ACAACATAAAGATTCTCATA+TGG | 0.498007 | tig0046033:+726 | Msa1466130:CDS |
| CTATGCTTAAGTGATGTCCT+TGG | 0.502908 | tig0046033:-1643 | Msa1466130:intergenic |
| TTTCGGCGATGGTAGCAGCC+GGG | 0.514299 | tig0046033:+2621 | Msa1466130:CDS |
| AGCACTTCGCCAACAATGAC+AGG | 0.527144 | tig0046033:+674 | Msa1466130:CDS |
| ATCCATACATAAATAAGTGC+AGG | 0.527262 | tig0046033:-1561 | Msa1466130:intergenic |
| GGCTGATCAACTAACTAGCC+AGG | 0.528042 | tig0046033:+2170 | Msa1466130:CDS |
| GTTTCGGCGATGGTAGCAGC+CGG | 0.528660 | tig0046033:+2620 | Msa1466130:CDS |
| TGTGAACCATTTAGCTAACA+TGG | 0.530263 | tig0046033:+2589 | Msa1466130:CDS |
| CACCCTGAGACTTGTCACTC+TGG | 0.536341 | tig0046033:+2376 | Msa1466130:CDS |
| TGAGAATCTTTATGTTGTTG+GGG | 0.542063 | tig0046033:-721 | Msa1466130:intergenic |
| GTTTCCAAATGCCTTAGCAA+TGG | 0.544525 | tig0046033:-2313 | Msa1466130:intergenic |
| GACAACTGTGGTTGCAGCAA+TGG | 0.548388 | tig0046033:+1696 | Msa1466130:CDS |
| ATCCCAATAGAGTTGATAAG+TGG | 0.549202 | tig0046033:-2717 | Msa1466130:intergenic |
| ATCCTGCAGCCCTTAAAAGA+AGG | 0.553004 | tig0046033:-1726 | Msa1466130:intergenic |
| GAATACAGATTCCATTGCTA+AGG | 0.561087 | tig0046033:+2302 | Msa1466130:intron |
| ACTAAGTCATCTCTAAGCCA+TGG | 0.564904 | tig0046033:-2782 | Msa1466130:intergenic |
| AAGACACCTGCTTGATCACA+TGG | 0.566578 | tig0046033:-83 | Msa1466130:intergenic |
| ATATAAGCTGACTCATTGCT+AGG | 0.573301 | tig0046033:-1314 | Msa1466130:intergenic |
| ACTATCATGCATTTCAAAGT+CGG | 0.575527 | tig0046033:+2961 | Msa1466130:three_prime_UTR |
| GCAGACAAAGTGATCAGCTA+TGG | 0.580371 | tig0046033:+2660 | Msa1466130:CDS |
| ATCCTAACTCCAGAAATCCA+TGG | 0.587682 | tig0046033:+2765 | Msa1466130:CDS |
| GGGAAAGTATGTTTCGGCGA+TGG | 0.588314 | tig0046033:+2610 | Msa1466130:CDS |
| GGAAGTGCATCAATTTGGCT+AGG | 0.589297 | tig0046033:-1754 | Msa1466130:intergenic |
| GTTACAAGTGTGCGAGACGG+TGG | 0.590064 | tig0046033:+2552 | Msa1466130:intron |
| GCTGTATGTTACTCTCGCCC+CGG | 0.599822 | tig0046033:-2639 | Msa1466130:intergenic |
| TTCGGCGATGGTAGCAGCCG+GGG | 0.604999 | tig0046033:+2622 | Msa1466130:CDS |
| AGTCTTAATCACTTCTGTAG+TGG | 0.608252 | tig0046033:+2691 | Msa1466130:CDS |
| TTCCAGAGTGACAAGTCTCA+GGG | 0.611456 | tig0046033:-2378 | Msa1466130:intergenic |
| TCTTAGACTAATGGACGAAG+TGG | 0.615048 | tig0046033:+636 | Msa1466130:CDS |
| ATGGATGTAACCTATATATG+TGG | 0.617491 | tig0046033:+1578 | Msa1466130:CDS |
| CGGATGAAACAGTAGCGGGT+CGG | 0.620064 | tig0046033:-1982 | Msa1466130:intergenic |
| GACACGGATGAAACAGTAGC+GGG | 0.621758 | tig0046033:-1986 | Msa1466130:intergenic |
| GTGAACCATTTAGCTAACAT+GGG | 0.634733 | tig0046033:+2590 | Msa1466130:CDS |
| ATGCTTAAGTGATGTCCTTG+GGG | 0.641855 | tig0046033:-1641 | Msa1466130:intergenic |
| AGATTATGTTGCGAATGACA+CGG | 0.653819 | tig0046033:-2002 | Msa1466130:intergenic |
| TTTGTTACAAGTGTGCGAGA+CGG | 0.662092 | tig0046033:+2549 | Msa1466130:intron |
| ATATTGCCATGTGATCAAGC+AGG | 0.681892 | tig0046033:+77 | Msa1466130:CDS |
| GCGAGACGGTGGTTTGATGA+CGG | 0.685668 | tig0046033:+2563 | Msa1466130:CDS |
| CACTACCTTAATGACAACTG+TGG | 0.702186 | tig0046033:+1684 | Msa1466130:CDS |
| CAGAGTGACAAGTCTCAGGG+TGG | 0.731138 | tig0046033:-2375 | Msa1466120:intergenic |
| TGACACGGATGAAACAGTAG+CGG | 0.738243 | tig0046033:-1987 | Msa1466120:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATAGTTTTAATAACTTTT+TGG | + | tig0046033:504-523 | Msa1466130:intron | 10.0% |
| !!! | ACTTGTTAATTTATATTATT+AGG | + | tig0046033:612-631 | Msa1466130:intron | 10.0% |
| !! | TTATGTTCTTAAATTAATAT+CGG | - | tig0046033:975-994 | Msa1466130:intergenic | 10.0% |
| !!! | TTTTAATAACTTTTTGGTTT+TGG | + | tig0046033:510-529 | Msa1466130:intron | 15.0% |
| !!! | CTTGAAATATTTTTTTTTGT+TGG | + | tig0046033:1141-1160 | Msa1466130:intron | 15.0% |
| !! | TTACCTAAAAAAAATAATTG+CGG | + | tig0046033:1458-1477 | Msa1466130:intron | 15.0% |
| !!! | CATTTATGATGTAAATATTT+TGG | - | tig0046033:1495-1514 | Msa1466130:intergenic | 15.0% |
| !!! | TTTATCTTTTAAACCATTTT+TGG | + | tig0046033:1879-1898 | Msa1466130:intron | 15.0% |
| !! | AATTTCATGTTAATATAGTT+AGG | - | tig0046033:2266-2285 | Msa1466130:intergenic | 15.0% |
| !!! | TAACATGAAATTTTATGTTA+TGG | + | tig0046033:2274-2293 | Msa1466130:intron | 15.0% |
| !! | AAAATATTGAAGGGAATATT+CGG | - | tig0046033:180-199 | Msa1466130:intergenic | 20.0% |
| !! | AAAAGTGAAGACAAATAATA+TGG | + | tig0046033:223-242 | Msa1466130:intron | 20.0% |
| !!! | TCATTTAACGACAAAATTTT+CGG | - | tig0046033:389-408 | Msa1466130:intergenic | 20.0% |
| !!! | ATACTCAATTTAATTTACCA+TGG | + | tig0046033:418-437 | Msa1466130:intron | 20.0% |
| !! | TTCTTTAATAATGTGCATAA+TGG | + | tig0046033:543-562 | Msa1466130:intron | 20.0% |
| !! | TCTTTAATAATGTGCATAAT+GGG | + | tig0046033:544-563 | Msa1466130:intron | 20.0% |
| !! | TTCAGTAACATTAGTATATA+TGG | + | tig0046033:815-834 | Msa1466130:intron | 20.0% |
| !! | CAAAGGAAATTAAAATACAT+AGG | - | tig0046033:1217-1236 | Msa1466130:intergenic | 20.0% |
| !!! | TTTCCGCAATTATTTTTTTT+AGG | - | tig0046033:1464-1483 | Msa1466130:intergenic | 20.0% |
| !! | TGAATAAATAAGCTAGATTT+AGG | + | tig0046033:1817-1836 | Msa1466130:intron | 20.0% |
| !! | GGTTTAAAAGATAAATACTA+GGG | - | tig0046033:1874-1893 | Msa1466130:intergenic | 20.0% |
| !! | TGGTTTAAAAGATAAATACT+AGG | - | tig0046033:1875-1894 | Msa1466130:intergenic | 20.0% |
| !! | TTGAAGTTTACCTTATAAAA+TGG | - | tig0046033:2033-2052 | Msa1466130:intergenic | 20.0% |
| !!! | TTTTAATTTGTCATTTCAAC+AGG | + | tig0046033:2125-2144 | Msa1466130:intron | 20.0% |
| !! | TAGGATGAATAATAAAGTAT+AGG | - | tig0046033:2247-2266 | Msa1466130:intergenic | 20.0% |
| !!! | TTTTAATATCAGAGTGATAT+TGG | + | tig0046033:2895-2914 | Msa1466130:intron | 20.0% |
| !! | AATAACTTGAAGAAGCTTTT+TGG | - | tig0046033:110-129 | Msa1466130:intergenic | 25.0% |
| !! | AATATTTTCAAAGCTGCATT+TGG | + | tig0046033:192-211 | Msa1466130:intron | 25.0% |
| !! | ATATTTTCAAAGCTGCATTT+GGG | + | tig0046033:193-212 | Msa1466130:intron | 25.0% |
| !! | TTTTATATAATCGCAACATC+CGG | + | tig0046033:269-288 | Msa1466130:intron | 25.0% |
| !!! | TTAAATCAGGTTTTAAACCA+TGG | - | tig0046033:438-457 | Msa1466130:intergenic | 25.0% |
| !! | TGATTTAATCAAGTGTCATT+CGG | + | tig0046033:450-469 | Msa1466130:intron | 25.0% |
| ! | GATAATCTAATATGTTGCTA+TGG | + | tig0046033:578-597 | Msa1466130:intron | 25.0% |
| ! | TTATTAGGTTCTTAGACTAA+TGG | + | tig0046033:627-646 | Msa1466130:intron | 25.0% |
| ! | ATGAGAATCTTTATGTTGTT+GGG | - | tig0046033:725-744 | Msa1466130:intergenic | 25.0% |
| ! | TATGAGAATCTTTATGTTGT+TGG | - | tig0046033:726-745 | Msa1466130:intergenic | 25.0% |
| ! | ACAACATAAAGATTCTCATA+TGG | + | tig0046033:726-745 | Msa1466130:CDS | 25.0% |
| !!! | ATTAAAAGTGCCCTTAATTA+AGG | - | tig0046033:796-815 | Msa1466130:intergenic | 25.0% |
| ! | AAGAACATAAAAATGATCGA+AGG | + | tig0046033:985-1004 | Msa1466130:intron | 25.0% |
| !!! | TGTATTTTAATTTCCTTTGC+AGG | + | tig0046033:1218-1237 | Msa1466130:intron | 25.0% |
| !!! | GTATTTTAATTTCCTTTGCA+GGG | + | tig0046033:1219-1238 | Msa1466130:intron | 25.0% |
| !! | ATAATTTTGTACCTGAAAAC+AGG | - | tig0046033:1353-1372 | Msa1466130:intergenic | 25.0% |
| ! | TTACATCATAAATGTGCTAA+TGG | + | tig0046033:1501-1520 | Msa1466130:intron | 25.0% |
| ! | TCAATTATCTTCTAACAAGT+TGG | + | tig0046033:2055-2074 | Msa1466130:intron | 25.0% |
| !!! | TGAGTTGATTTTTGTTTTTG+TGG | + | tig0046033:2211-2230 | Msa1466130:intron | 25.0% |
| !!! | TTTTGAAAACTTTAGCCAAT+AGG | - | tig0046033:2351-2370 | Msa1466130:intergenic | 25.0% |
| CTTATCAGAACTAACGAAAT+GGG | - | tig0046033:151-170 | Msa1466130:intergenic | 30.0% | |
| !! | GCAGCTTTGAAAATATTGAA+GGG | - | tig0046033:189-208 | Msa1466130:intergenic | 30.0% |
| !! | TGCAGCTTTGAAAATATTGA+AGG | - | tig0046033:190-209 | Msa1466130:intergenic | 30.0% |
| ! | TATTTTCAAAGCTGCATTTG+GGG | + | tig0046033:194-213 | Msa1466130:intron | 30.0% |
| !! | TATTTTTGCACGTGATTAAC+CGG | - | tig0046033:291-310 | Msa1466130:intergenic | 30.0% |
| GTTAATCACGTGCAAAAATA+TGG | + | tig0046033:291-310 | Msa1466130:intron | 30.0% | |
| !!! | CGAACTAACCATATTTTTTG+CGG | + | tig0046033:350-369 | Msa1466130:intron | 30.0% |
| TTAATCTGCCGCAAAAAATA+TGG | - | tig0046033:361-380 | Msa1466130:intergenic | 30.0% | |
| GAATGACACTTGATTAAATC+AGG | - | tig0046033:451-470 | Msa1466130:intergenic | 30.0% | |
| ! | GATTTAATCAAGTGTCATTC+GGG | + | tig0046033:451-470 | Msa1466130:intron | 30.0% |
| ATTCGGGTGTAAAAAAAATG+TGG | + | tig0046033:467-486 | Msa1466130:intron | 30.0% | |
| TTCGGGTGTAAAAAAAATGT+GGG | + | tig0046033:468-487 | Msa1466130:intron | 30.0% | |
| TGAGAATCTTTATGTTGTTG+GGG | - | tig0046033:724-743 | Msa1466130:intergenic | 30.0% | |
| TCATTGTCTCTCCTTAATTA+AGG | + | tig0046033:782-801 | Msa1466130:intron | 30.0% | |
| CATTGTCTCTCCTTAATTAA+GGG | + | tig0046033:783-802 | Msa1466130:intron | 30.0% | |
| AACTTGCAATGCAATATATG+AGG | + | tig0046033:880-899 | Msa1466130:intron | 30.0% | |
| ! | GTTTTGTGTATACGCAATAT+TGG | + | tig0046033:1268-1287 | Msa1466130:CDS | 30.0% |
| ! | AAAATGTCTATCCTGTTTTC+AGG | + | tig0046033:1339-1358 | Msa1466130:CDS | 30.0% |
| TAGGTAAGTTCTTACAATCA+TGG | - | tig0046033:1445-1464 | Msa1466130:intergenic | 30.0% | |
| ATCCATACATAAATAAGTGC+AGG | - | tig0046033:1564-1583 | Msa1466130:intergenic | 30.0% | |
| ATGGATGTAACCTATATATG+TGG | + | tig0046033:1578-1597 | Msa1466130:CDS | 30.0% | |
| TTGTTCTCTTCCACATATAT+AGG | - | tig0046033:1591-1610 | Msa1466130:intergenic | 30.0% | |
| ! | AATCTGCTCACCATTTTATA+AGG | + | tig0046033:2020-2039 | Msa1466130:CDS | 30.0% |
| !!! | TCTGCTAGTAGACTTTTTTA+TGG | + | tig0046033:2149-2168 | Msa1466130:CDS | 30.0% |
| TGTGCATAAATATAATCACC+TGG | - | tig0046033:2191-2210 | Msa1466130:intergenic | 30.0% | |
| AACTACTAGTTGTAACCTAT+TGG | + | tig0046033:2333-2352 | Msa1466130:CDS | 30.0% | |
| TATCCTTTATGCCATATTAC+TGG | + | tig0046033:2428-2447 | Msa1466130:CDS | 30.0% | |
| ! | ACATTTTCTGAATCTTGTAG+AGG | - | tig0046033:2471-2490 | Msa1466130:intergenic | 30.0% |
| ! | TAACATGGGAAAGTATGTTT+CGG | + | tig0046033:2604-2623 | Msa1466130:CDS | 30.0% |
| AACCACTTATCAACTCTATT+GGG | + | tig0046033:2715-2734 | Msa1466130:CDS | 30.0% | |
| ! | ACTCTATTGGGATTTTATCA+AGG | + | tig0046033:2727-2746 | Msa1466130:CDS | 30.0% |
| ! | ATTGGGATTTTATCAAGGAT+TGG | + | tig0046033:2732-2751 | Msa1466130:CDS | 30.0% |
| ! | TTGGGATTTTATCAAGGATT+GGG | + | tig0046033:2733-2752 | Msa1466130:CDS | 30.0% |
| GTAAGTTCTCTATCTCTTAA+TGG | + | tig0046033:2839-2858 | Msa1466130:intron | 30.0% | |
| ACTATCATGCATTTCAAAGT+CGG | + | tig0046033:2961-2980 | Msa1466130:three_prime_UTR | 30.0% | |
| CCTTATCAGAACTAACGAAA+TGG | - | tig0046033:152-171 | Msa1466130:intergenic | 35.0% | |
| !! | CCATTTCGTTAGTTCTGATA+AGG | + | tig0046033:149-168 | Msa1466130:CDS | 35.0% |
| ATCACGTGCAAAAATATGGT+TGG | + | tig0046033:295-314 | Msa1466130:intron | 35.0% | |
| !!! | CATATGGTCACTTTTCTTGT+CGG | + | tig0046033:742-761 | Msa1466130:CDS | 35.0% |
| ! | ATATAAGCTGACTCATTGCT+AGG | - | tig0046033:1317-1336 | Msa1466130:intergenic | 35.0% |
| AGCCTGCACTTATTTATGTA+TGG | + | tig0046033:1559-1578 | Msa1466130:CDS | 35.0% | |
| !! | TCATTTTTGAATTCTCCCCA+AGG | + | tig0046033:1626-1645 | Msa1466130:CDS | 35.0% |
| TATGCTTAAGTGATGTCCTT+GGG | - | tig0046033:1645-1664 | Msa1466130:intergenic | 35.0% | |
| ! | TGGTTATGCACCTTCTTTTA+AGG | + | tig0046033:1716-1735 | Msa1466130:CDS | 35.0% |
| ! | GGTTATGCACCTTCTTTTAA+GGG | + | tig0046033:1717-1736 | Msa1466130:CDS | 35.0% |
| ACTTCCTGCAATATTACTTC+TGG | + | tig0046033:1771-1790 | Msa1466130:CDS | 35.0% | |
| CTAACCAGAAGTAATATTGC+AGG | - | tig0046033:1778-1797 | Msa1466130:intergenic | 35.0% | |
| AGCACAAATGTGTCCAAAAA+TGG | - | tig0046033:1895-1914 | Msa1466130:intergenic | 35.0% | |
| AGATTATGTTGCGAATGACA+CGG | - | tig0046033:2005-2024 | Msa1466130:intergenic | 35.0% | |
| GAATACAGATTCCATTGCTA+AGG | + | tig0046033:2302-2321 | Msa1466130:intron | 35.0% | |
| TGTGAACCATTTAGCTAACA+TGG | + | tig0046033:2589-2608 | Msa1466130:CDS | 35.0% | |
| GTGAACCATTTAGCTAACAT+GGG | + | tig0046033:2590-2609 | Msa1466130:CDS | 35.0% | |
| ACTTTCCCATGTTAGCTAAA+TGG | - | tig0046033:2598-2617 | Msa1466130:intergenic | 35.0% | |
| AGTCTTAATCACTTCTGTAG+TGG | + | tig0046033:2691-2710 | Msa1466130:CDS | 35.0% | |
| CAACCACTTATCAACTCTAT+TGG | + | tig0046033:2714-2733 | Msa1466130:CDS | 35.0% | |
| !! | ATCCCAATAGAGTTGATAAG+TGG | - | tig0046033:2720-2739 | Msa1466130:intergenic | 35.0% |
| ! | TGGGATTTTATCAAGGATTG+GGG | + | tig0046033:2734-2753 | Msa1466130:CDS | 35.0% |
| ATATTGCCATGTGATCAAGC+AGG | + | tig0046033:77-96 | Msa1466130:CDS | 40.0% | |
| ! | TCTTAGACTAATGGACGAAG+TGG | + | tig0046033:636-655 | Msa1466130:CDS | 40.0% |
| ! | TGCCTTTTTCCTGTCATTGT+TGG | - | tig0046033:686-705 | Msa1466130:intergenic | 40.0% |
| ! | TGCATTGCAAGTTGAACTGA+GGG | - | tig0046033:873-892 | Msa1466130:intergenic | 40.0% |
| ! | TTGCATTGCAAGTTGAACTG+AGG | - | tig0046033:874-893 | Msa1466130:intergenic | 40.0% |
| AGCCACTAACTAGTATGGTT+TGG | + | tig0046033:1095-1114 | Msa1466130:intron | 40.0% | |
| GTCCAAACCATACTAGTTAG+TGG | - | tig0046033:1100-1119 | Msa1466130:intergenic | 40.0% | |
| TTTGGACCCACTAAGCTAAT+GGG | + | tig0046033:1113-1132 | Msa1466130:intron | 40.0% | |
| ! | GTATGACCCATTAGCTTAGT+GGG | - | tig0046033:1122-1141 | Msa1466130:intergenic | 40.0% |
| ! | AGTATGACCCATTAGCTTAG+TGG | - | tig0046033:1123-1142 | Msa1466130:intergenic | 40.0% |
| ATGCTTAAGTGATGTCCTTG+GGG | - | tig0046033:1644-1663 | Msa1466130:intergenic | 40.0% | |
| CTATGCTTAAGTGATGTCCT+TGG | - | tig0046033:1646-1665 | Msa1466130:intergenic | 40.0% | |
| CACTACCTTAATGACAACTG+TGG | + | tig0046033:1684-1703 | Msa1466130:CDS | 40.0% | |
| TGCAACCACAGTTGTCATTA+AGG | - | tig0046033:1692-1711 | Msa1466130:intergenic | 40.0% | |
| ! | TTGCAGGAAGTGCATCAATT+TGG | - | tig0046033:1762-1781 | Msa1466130:intergenic | 40.0% |
| ! | GATTCCATTGCTAAGGCATT+TGG | + | tig0046033:2309-2328 | Msa1466130:intron | 40.0% |
| GTTTCCAAATGCCTTAGCAA+TGG | - | tig0046033:2316-2335 | Msa1466130:intergenic | 40.0% | |
| ! | TCACTCTGGAAGACTGTATA+TGG | + | tig0046033:2390-2409 | Msa1466130:CDS | 40.0% |
| ACGCCAGTAATATGGCATAA+AGG | - | tig0046033:2434-2453 | Msa1466130:intergenic | 40.0% | |
| TTTGTTACAAGTGTGCGAGA+CGG | + | tig0046033:2549-2568 | Msa1466130:intron | 40.0% | |
| ATCCTAACTCCAGAAATCCA+TGG | + | tig0046033:2765-2784 | Msa1466130:CDS | 40.0% | |
| ATCTCTAAGCCATGGATTTC+TGG | - | tig0046033:2777-2796 | Msa1466130:intergenic | 40.0% | |
| ACTAAGTCATCTCTAAGCCA+TGG | - | tig0046033:2785-2804 | Msa1466130:intergenic | 40.0% | |
| TCAGAGTGATATTGGATTGC+AGG | + | tig0046033:2903-2922 | Msa1466130:intron | 40.0% | |
| !! | AGGCCTTAAACGTTGTTTTG+AGG | + | tig0046033:2923-2942 | Msa1466130:intron | 40.0% |
| !!! | GGCCTTAAACGTTGTTTTGA+GGG | + | tig0046033:2924-2943 | Msa1466130:intron | 40.0% |
| CACCCTCAAAACAACGTTTA+AGG | - | tig0046033:2929-2948 | Msa1466130:intergenic | 40.0% | |
| AAGACACCTGCTTGATCACA+TGG | - | tig0046033:86-105 | Msa1466130:intergenic | 45.0% | |
| ! | GGCGAAGTGCTTTGTGAATA+TGG | - | tig0046033:665-684 | Msa1466130:intergenic | 45.0% |
| CGCCAACAATGACAGGAAAA+AGG | + | tig0046033:681-700 | Msa1466130:CDS | 45.0% | |
| GCACACTACATGTACCAACT+AGG | + | tig0046033:904-923 | Msa1466130:intron | 45.0% | |
| CTGCTTCATGATTGCCTAGT+TGG | - | tig0046033:921-940 | Msa1466130:intergenic | 45.0% | |
| ! | CGACTAGCCACTAACTAGTA+TGG | + | tig0046033:1090-1109 | Msa1466130:intron | 45.0% |
| GTTTGGACCCACTAAGCTAA+TGG | + | tig0046033:1112-1131 | Msa1466130:intron | 45.0% | |
| ATCCTGCAGCCCTTAAAAGA+AGG | - | tig0046033:1729-1748 | Msa1466130:intergenic | 45.0% | |
| ! | GGAAGTGCATCAATTTGGCT+AGG | - | tig0046033:1757-1776 | Msa1466130:intergenic | 45.0% |
| GGGCGATAAAAAAGGTCGAA+TGG | - | tig0046033:1964-1983 | Msa1466130:intergenic | 45.0% | |
| TGACACGGATGAAACAGTAG+CGG | - | tig0046033:1990-2009 | Msa1466130:intergenic | 45.0% | |
| TTCCAGAGTGACAAGTCTCA+GGG | - | tig0046033:2381-2400 | Msa1466130:intergenic | 45.0% | |
| TGCATAGCACGCCAGTAATA+TGG | - | tig0046033:2442-2461 | Msa1466130:intergenic | 45.0% | |
| GCAGACAAAGTGATCAGCTA+TGG | + | tig0046033:2660-2679 | Msa1466130:CDS | 45.0% | |
| !! | AGCCATGGATTTCTGGAGTT+AGG | - | tig0046033:2770-2789 | Msa1466130:intergenic | 45.0% |
| !!! | ACGTTGTTTTGAGGGTGACA+TGG | + | tig0046033:2932-2951 | Msa1466130:CDS | 45.0% |
| !!! | CGTTGTTTTGAGGGTGACAT+GGG | + | tig0046033:2933-2952 | Msa1466130:CDS | 45.0% |
| AGCACTTCGCCAACAATGAC+AGG | + | tig0046033:674-693 | Msa1466130:CDS | 50.0% | |
| TCCTTTGCAGGGTTGTCTAC+AGG | + | tig0046033:1230-1249 | Msa1466130:intron | 50.0% | |
| ACCTGTAGACAACCCTGCAA+AGG | - | tig0046033:1234-1253 | Msa1466130:intergenic | 50.0% | |
| GACAACTGTGGTTGCAGCAA+TGG | + | tig0046033:1696-1715 | Msa1466130:CDS | 50.0% | |
| !! | CACCTTCTTTTAAGGGCTGC+AGG | + | tig0046033:1724-1743 | Msa1466130:CDS | 50.0% |
| GACACGGATGAAACAGTAGC+GGG | - | tig0046033:1989-2008 | Msa1466130:intergenic | 50.0% | |
| GGCTGATCAACTAACTAGCC+AGG | + | tig0046033:2170-2189 | Msa1466130:CDS | 50.0% | |
| CTTCCAGAGTGACAAGTCTC+AGG | - | tig0046033:2382-2401 | Msa1466130:intergenic | 50.0% | |
| ! | GGGAAAGTATGTTTCGGCGA+TGG | + | tig0046033:2610-2629 | Msa1466130:CDS | 50.0% |
| AGCGGGTCGGGCGATAAAAA+AGG | - | tig0046033:1972-1991 | Msa1466130:intergenic | 55.0% | |
| !! | GGATGAAACAGTAGCGGGTC+GGG | - | tig0046033:1984-2003 | Msa1466130:intergenic | 55.0% |
| !! | CGGATGAAACAGTAGCGGGT+CGG | - | tig0046033:1985-2004 | Msa1466130:intergenic | 55.0% |
| CAGAGTGACAAGTCTCAGGG+TGG | - | tig0046033:2378-2397 | Msa1466130:intergenic | 55.0% | |
| CACCCTGAGACTTGTCACTC+TGG | + | tig0046033:2376-2395 | Msa1466130:CDS | 55.0% | |
| GTTACAAGTGTGCGAGACGG+TGG | + | tig0046033:2552-2571 | Msa1466130:intron | 55.0% | |
| GCGAGACGGTGGTTTGATGA+CGG | + | tig0046033:2563-2582 | Msa1466130:CDS | 55.0% | |
| GCTGTATGTTACTCTCGCCC+CGG | - | tig0046033:2642-2661 | Msa1466130:intergenic | 55.0% | |
| GTTTCGGCGATGGTAGCAGC+CGG | + | tig0046033:2620-2639 | Msa1466130:CDS | 60.0% | |
| TTTCGGCGATGGTAGCAGCC+GGG | + | tig0046033:2621-2640 | Msa1466130:CDS | 60.0% | |
| TTCGGCGATGGTAGCAGCCG+GGG | + | tig0046033:2622-2641 | Msa1466130:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0046033 | gene | 72 | 3000 | 72 | ID=Msa1466130;Name=Msa1466130 |
| tig0046033 | mRNA | 72 | 3000 | 72 | ID=Msa1466130-mRNA-1;Parent=Msa1466130;Name=Msa1466130-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.87|0.77|1|1|1|9|41|406 |
| tig0046033 | exon | 72 | 170 | 72 | ID=Msa1466130-mRNA-1:exon:24991;Parent=Msa1466130-mRNA-1 |
| tig0046033 | exon | 634 | 763 | 634 | ID=Msa1466130-mRNA-1:exon:24992;Parent=Msa1466130-mRNA-1 |
| tig0046033 | exon | 1240 | 1360 | 1240 | ID=Msa1466130-mRNA-1:exon:24993;Parent=Msa1466130-mRNA-1 |
| tig0046033 | exon | 1543 | 1792 | 1543 | ID=Msa1466130-mRNA-1:exon:24994;Parent=Msa1466130-mRNA-1 |
| tig0046033 | exon | 1937 | 2041 | 1937 | ID=Msa1466130-mRNA-1:exon:24995;Parent=Msa1466130-mRNA-1 |
| tig0046033 | exon | 2147 | 2191 | 2147 | ID=Msa1466130-mRNA-1:exon:24996;Parent=Msa1466130-mRNA-1 |
| tig0046033 | exon | 2310 | 2462 | 2310 | ID=Msa1466130-mRNA-1:exon:24997;Parent=Msa1466130-mRNA-1 |
| tig0046033 | exon | 2560 | 2842 | 2560 | ID=Msa1466130-mRNA-1:exon:24998;Parent=Msa1466130-mRNA-1 |
| tig0046033 | exon | 2925 | 3000 | 2925 | ID=Msa1466130-mRNA-1:exon:24999;Parent=Msa1466130-mRNA-1 |
| tig0046033 | CDS | 72 | 170 | 72 | ID=Msa1466130-mRNA-1:cds;Parent=Msa1466130-mRNA-1 |
| tig0046033 | CDS | 634 | 763 | 634 | ID=Msa1466130-mRNA-1:cds;Parent=Msa1466130-mRNA-1 |
| tig0046033 | CDS | 1240 | 1360 | 1240 | ID=Msa1466130-mRNA-1:cds;Parent=Msa1466130-mRNA-1 |
| tig0046033 | CDS | 1543 | 1792 | 1543 | ID=Msa1466130-mRNA-1:cds;Parent=Msa1466130-mRNA-1 |
| tig0046033 | CDS | 1937 | 2041 | 1937 | ID=Msa1466130-mRNA-1:cds;Parent=Msa1466130-mRNA-1 |
| tig0046033 | CDS | 2147 | 2191 | 2147 | ID=Msa1466130-mRNA-1:cds;Parent=Msa1466130-mRNA-1 |
| tig0046033 | CDS | 2310 | 2462 | 2310 | ID=Msa1466130-mRNA-1:cds;Parent=Msa1466130-mRNA-1 |
| tig0046033 | CDS | 2560 | 2842 | 2560 | ID=Msa1466130-mRNA-1:cds;Parent=Msa1466130-mRNA-1 |
| tig0046033 | CDS | 2925 | 2959 | 2925 | ID=Msa1466130-mRNA-1:cds;Parent=Msa1466130-mRNA-1 |
| tig0046033 | three_prime_UTR | 2960 | 3000 | 2960 | ID=Msa1466130-mRNA-1:three_prime_utr;Parent=Msa1466130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
