Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420560 | XP_013461140.1 | 96.639 | 238 | 8 | 0 | 1 | 238 | 1 | 238 | 3.39e-170 | 478 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420560 | sp|Q2HIW2|MAPR4_ARATH | 72.034 | 236 | 60 | 1 | 9 | 238 | 10 | 245 | 2.60e-125 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420560 | A0A072UZD8 | 96.639 | 238 | 8 | 0 | 1 | 238 | 1 | 238 | 1.62e-170 | 478 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012040 | Msa0420560 | 0.806539 | 7.832180e-50 | -8.615850e-47 |
| Msa0013050 | Msa0420560 | -0.800762 | 1.237990e-48 | -8.615850e-47 |
| Msa0028660 | Msa0420560 | 0.815865 | 7.425451e-52 | -8.615850e-47 |
| Msa0058300 | Msa0420560 | 0.801752 | 7.763495e-49 | -8.615850e-47 |
| Msa0115270 | Msa0420560 | 0.809403 | 1.925513e-50 | -8.615850e-47 |
| Msa0115390 | Msa0420560 | 0.820969 | 5.179364e-53 | -8.615850e-47 |
| Msa0150820 | Msa0420560 | 0.814849 | 1.249163e-51 | -8.615850e-47 |
| Msa0160550 | Msa0420560 | 0.811524 | 6.704938e-51 | -8.615850e-47 |
| Msa0193120 | Msa0420560 | 0.808179 | 3.516880e-50 | -8.615850e-47 |
| Msa0208350 | Msa0420560 | 0.807758 | 4.322622e-50 | -8.615850e-47 |
| Msa0212310 | Msa0420560 | 0.801921 | 7.166888e-49 | -8.615850e-47 |
| Msa0372340 | Msa0420560 | 0.831645 | 1.484372e-55 | -8.615850e-47 |
| Msa0372670 | Msa0420560 | 0.807881 | 4.070827e-50 | -8.615850e-47 |
| Msa0385580 | Msa0420560 | 0.804783 | 1.829985e-49 | -8.615850e-47 |
| Msa0420560 | Msa0429290 | 0.811155 | 8.064497e-51 | -8.615850e-47 |
| Msa0420560 | Msa0446580 | 0.806030 | 1.002394e-49 | -8.615850e-47 |
| Msa0420560 | Msa0475580 | 0.808388 | 3.174266e-50 | -8.615850e-47 |
| Msa0420560 | Msa0545080 | 0.803742 | 3.015326e-49 | -8.615850e-47 |
| Msa0420560 | Msa0602340 | 0.813907 | 2.017881e-51 | -8.615850e-47 |
| Msa0420560 | Msa0610430 | 0.821562 | 3.780550e-53 | -8.615850e-47 |
| Msa0420560 | Msa0673460 | 0.809755 | 1.617845e-50 | -8.615850e-47 |
| Msa0420560 | Msa0692830 | 0.808322 | 3.278789e-50 | -8.615850e-47 |
| Msa0420560 | Msa0696450 | 0.805101 | 1.570340e-49 | -8.615850e-47 |
| Msa0420560 | Msa0724830 | 0.801767 | 7.708822e-49 | -8.615850e-47 |
| Msa0420560 | Msa0734660 | 0.814473 | 1.513374e-51 | -8.615850e-47 |
| Msa0420560 | Msa0784860 | 0.825985 | 3.476918e-54 | -8.615850e-47 |
| Msa0420560 | Msa0787750 | 0.814368 | 1.596832e-51 | -8.615850e-47 |
| Msa0420560 | Msa0813720 | 0.810480 | 1.128624e-50 | -8.615850e-47 |
| Msa0420560 | Msa0813740 | 0.821090 | 4.857018e-53 | -8.615850e-47 |
| Msa0420560 | Msa0824680 | 0.804479 | 2.118546e-49 | -8.615850e-47 |
| Msa0420560 | Msa0842830 | 0.806239 | 9.057872e-50 | -8.615850e-47 |
| Msa0420560 | Msa0847080 | 0.803495 | 3.392531e-49 | -8.615850e-47 |
| Msa0420560 | Msa0863870 | 0.804070 | 2.576761e-49 | -8.615850e-47 |
| Msa0420560 | Msa0971020 | 0.804474 | 2.122716e-49 | -8.615850e-47 |
| Msa0420560 | Msa0996170 | 0.803158 | 3.983780e-49 | -8.615850e-47 |
| Msa0420560 | Msa1046020 | 0.800723 | 1.260912e-48 | -8.615850e-47 |
| Msa0420560 | Msa1046060 | 0.804485 | 2.112223e-49 | -8.615850e-47 |
| Msa0420560 | Msa1051200 | 0.820812 | 5.627310e-53 | -8.615850e-47 |
| Msa0420560 | Msa1084470 | 0.833852 | 4.203906e-56 | -8.615850e-47 |
| Msa0420560 | Msa1137700 | 0.815394 | 9.455739e-52 | -8.615850e-47 |
| Msa0420560 | Msa1217470 | 0.802908 | 4.487643e-49 | -8.615850e-47 |
| Msa0420560 | Msa1224810 | 0.813863 | 2.063790e-51 | -8.615850e-47 |
| Msa0420560 | Msa1302190 | -0.814656 | 1.378438e-51 | -8.615850e-47 |
| Msa0420560 | Msa1385770 | 0.815889 | 7.333864e-52 | -8.615850e-47 |
| Msa0420560 | Msa1409240 | 0.813957 | 1.967175e-51 | -8.615850e-47 |
| Msa0420560 | Msa1434140 | 0.816092 | 6.607947e-52 | -8.615850e-47 |
| Msa0241800 | Msa0420560 | 0.807483 | 4.945111e-50 | -8.615850e-47 |
| Msa0295540 | Msa0420560 | 0.800686 | 1.282734e-48 | -8.615850e-47 |
| Msa0306710 | Msa0420560 | 0.801667 | 8.080759e-49 | -8.615850e-47 |
| Msa0320100 | Msa0420560 | 0.801359 | 9.346967e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420560 | MtrunA17_Chr3g0120151 | 96.639 | 238 | 8 | 0 | 1 | 238 | 1 | 238 | 3.12e-174 | 478 |
| Msa0420560 | MtrunA17_Chr3g0136801 | 43.299 | 97 | 55 | 0 | 35 | 131 | 3 | 99 | 4.30e-23 | 89.7 |
| Msa0420560 | MtrunA17_Chr6g0460501 | 40.206 | 97 | 58 | 0 | 35 | 131 | 78 | 174 | 5.74e-20 | 84.3 |
| Msa0420560 | MtrunA17_Chr1g0203511 | 38.542 | 96 | 59 | 0 | 35 | 130 | 108 | 203 | 6.37e-17 | 77.4 |
| Msa0420560 | MtrunA17_Chr6g0470661 | 32.857 | 140 | 86 | 3 | 36 | 171 | 74 | 209 | 1.77e-16 | 75.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0420560 | AT4G14965.1 | 72.034 | 236 | 60 | 1 | 9 | 238 | 10 | 245 | 2.64e-126 | 358 |
| Msa0420560 | AT4G14965.2 | 67.826 | 115 | 31 | 1 | 9 | 117 | 10 | 124 | 2.52e-48 | 158 |
| Msa0420560 | AT2G24940.1 | 45.361 | 97 | 53 | 0 | 35 | 131 | 3 | 99 | 1.17e-22 | 89.0 |
| Msa0420560 | AT3G48890.1 | 39.583 | 96 | 58 | 0 | 35 | 130 | 71 | 166 | 8.37e-19 | 82.4 |
| Msa0420560 | AT5G52240.2 | 39.583 | 96 | 58 | 0 | 35 | 130 | 75 | 170 | 4.52e-18 | 79.3 |
| Msa0420560 | AT5G52240.1 | 39.583 | 96 | 58 | 0 | 35 | 130 | 75 | 170 | 6.99e-18 | 79.7 |
Find 74 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAATCCTTATAGGAATTCT+TGG | 0.265933 | 3_2:-69146269 | Msa0420560:CDS |
| GCTTCTCGCGCTTTCTTCTC+TGG | 0.283915 | 3_2:-69145564 | Msa0420560:CDS |
| CCAGGGTTGCCAATCCTTAT+AGG | 0.305920 | 3_2:-69146278 | Msa0420560:CDS |
| ACCAAGGGAAAATCACATTA+TGG | 0.338044 | 3_2:-69145742 | Msa0420560:CDS |
| AACCTCAATGCAGTTCAAAA+TGG | 0.344961 | 3_2:-69143655 | Msa0420560:CDS |
| AACAGATGCAAAGTTTAATC+AGG | 0.347307 | 3_2:-69143264 | Msa0420560:exon |
| ATCAGGATTCTAATACAAAT+AGG | 0.347743 | 3_2:-69143247 | Msa0420560:three_prime_UTR |
| AAAAGAGCAAAACCGGTAAT+AGG | 0.364781 | 3_2:+69146571 | None:intergenic |
| CTAGCAACTTCTCCTATTAC+CGG | 0.366163 | 3_2:-69146583 | Msa0420560:CDS |
| GGAGGTTATCATCACTTTGC+TGG | 0.376414 | 3_2:-69145712 | Msa0420560:CDS |
| TTGTTCAATGGAACTGATCC+AGG | 0.379913 | 3_2:-69146296 | Msa0420560:CDS |
| TGCTTTGAAGAGTCTCAGTT+AGG | 0.386400 | 3_2:-69143330 | Msa0420560:CDS |
| GTTAGGGCAACCTGGGTTAG+AGG | 0.389138 | 3_2:-69143313 | Msa0420560:CDS |
| CCCACCCAAGAATTCCTATA+AGG | 0.391806 | 3_2:+69146264 | None:intergenic |
| TTTAATGAAGCTAGTAATTG+AGG | 0.417658 | 3_2:-69143169 | Msa0420560:three_prime_UTR |
| ACAACGCTTACTCATCTTCC+CGG | 0.429683 | 3_2:+69143356 | None:intergenic |
| CAATCCTTATAGGAATTCTT+GGG | 0.434357 | 3_2:-69146268 | Msa0420560:intron |
| ATCCTACAAAATATTTGAAA+GGG | 0.443636 | 3_2:-69143742 | Msa0420560:CDS |
| GAAGAGCTTGCATTGTTCAA+TGG | 0.446040 | 3_2:-69146308 | Msa0420560:CDS |
| ATACCTCACCGCCCTCATCT+TGG | 0.447566 | 3_2:+69143630 | None:intergenic |
| GAGTCTCAGTTAGGGCAACC+TGG | 0.454818 | 3_2:-69143321 | Msa0420560:CDS |
| TTCTTCTCTGGAAATTTCAC+AGG | 0.459540 | 3_2:-69145552 | Msa0420560:intron |
| AAGGACGAAAAGAGCAAAAC+CGG | 0.461374 | 3_2:+69146564 | None:intergenic |
| CCACTAGAAATTGCTTTGAC+CGG | 0.469483 | 3_2:-69143375 | Msa0420560:CDS |
| CCTATAAGGATTGGCAACCC+TGG | 0.496548 | 3_2:+69146278 | None:intergenic |
| AATCCTACAAAATATTTGAA+AGG | 0.498002 | 3_2:-69143743 | Msa0420560:CDS |
| AGGCCTGTTGGCAAGTTAGT+TGG | 0.503207 | 3_2:-69143788 | Msa0420560:CDS |
| CCTGTGAAGTGATGGAAAAT+CGG | 0.503383 | 3_2:+69146524 | None:intergenic |
| CCAAGAATTCCTATAAGGAT+TGG | 0.505658 | 3_2:+69146269 | None:intergenic |
| CGACCAACTAACTTGCCAAC+AGG | 0.510685 | 3_2:+69143785 | None:intergenic |
| GGAGAAGAAGAGCAAGGAAA+AGG | 0.512294 | 3_2:+69146545 | None:intergenic |
| AAGTGATGATAACCTCCTCC+TGG | 0.519496 | 3_2:+69145718 | None:intergenic |
| CACTAGAAATTGCTTTGACC+GGG | 0.524553 | 3_2:-69143374 | Msa0420560:CDS |
| GCTTTGAAGAGTCTCAGTTA+GGG | 0.527825 | 3_2:-69143329 | Msa0420560:CDS |
| CTTTACTTATGTAGGCCTGT+TGG | 0.531888 | 3_2:-69143800 | Msa0420560:intron |
| GGAAAATCACATTATGGTCC+AGG | 0.535845 | 3_2:-69145736 | Msa0420560:CDS |
| TTCAAAATGGAGCCAAGATG+AGG | 0.538293 | 3_2:-69143642 | Msa0420560:CDS |
| GATCAGGTATGGTGTGATGT+TGG | 0.545254 | 3_2:-69143420 | Msa0420560:intron |
| TCACATTATGGTCCAGGAGG+AGG | 0.548964 | 3_2:-69145730 | Msa0420560:CDS |
| TTTGAAAGGGGTCGAAGCTA+AGG | 0.554491 | 3_2:-69143729 | Msa0420560:CDS |
| GTTATCATCACTTTGCTGGA+AGG | 0.556971 | 3_2:-69145708 | Msa0420560:intron |
| TGATGTTGGCTACCCTAGGT+TGG | 0.557940 | 3_2:-69143406 | Msa0420560:CDS |
| AGTGGTCTCTTAACCAACCT+AGG | 0.563498 | 3_2:+69143393 | None:intergenic |
| AAACTTTGCATCTGTTAGCA+TGG | 0.565894 | 3_2:+69143271 | None:intergenic |
| AAAAGTGACCTGTGAAGTGA+TGG | 0.571043 | 3_2:+69146516 | None:intergenic |
| TACGATCCTCACACAGAACA+AGG | 0.577912 | 3_2:-69146623 | Msa0420560:five_prime_UTR |
| CAAGAGTGTAGTTGACTGGA+GGG | 0.581429 | 3_2:-69144461 | Msa0420560:CDS |
| GGTGTGATGTTGGCTACCCT+AGG | 0.583244 | 3_2:-69143410 | Msa0420560:CDS |
| GTCTGTGTTTGATGTAACCA+AGG | 0.583750 | 3_2:-69145758 | Msa0420560:CDS |
| AGTCTCAGTTAGGGCAACCT+GGG | 0.583949 | 3_2:-69143320 | Msa0420560:CDS |
| AGGTCAAGAGTGTAGTTGAC+TGG | 0.590092 | 3_2:-69144465 | Msa0420560:CDS |
| CCGGTCAAAGCAATTTCTAG+TGG | 0.597751 | 3_2:+69143375 | None:intergenic |
| CCTGGGTTAGAGGTATATGA+AGG | 0.601402 | 3_2:-69143303 | Msa0420560:CDS |
| TCAAAATGGAGCCAAGATGA+GGG | 0.601857 | 3_2:-69143641 | Msa0420560:CDS |
| GTGGTCTCTTAACCAACCTA+GGG | 0.601995 | 3_2:+69143394 | None:intergenic |
| GTCGAAGCTAAGGCGGCAAG+AGG | 0.606309 | 3_2:-69143719 | Msa0420560:CDS |
| TCCTACAAAATATTTGAAAG+GGG | 0.614400 | 3_2:-69143741 | Msa0420560:CDS |
| AGAAAAGCAGAAGATTGAAG+AGG | 0.616982 | 3_2:-69143684 | Msa0420560:CDS |
| CCTTCATATACCTCTAACCC+AGG | 0.622425 | 3_2:+69143303 | None:intergenic |
| TCTGTGTTTGATGTAACCAA+GGG | 0.623353 | 3_2:-69145757 | Msa0420560:CDS |
| TCAAGAGTGTAGTTGACTGG+AGG | 0.626751 | 3_2:-69144462 | Msa0420560:CDS |
| GTCGATACTACGATAGCCGA+GGG | 0.630099 | 3_2:-69143766 | Msa0420560:CDS |
| AGTGTGTTATTTGACAACAA+AGG | 0.634292 | 3_2:+69143029 | None:intergenic |
| TCATCGCCTTGTTCTGTGTG+AGG | 0.642781 | 3_2:+69146617 | None:intergenic |
| TGTTCAATGGAACTGATCCA+GGG | 0.648587 | 3_2:-69146295 | Msa0420560:CDS |
| GGTCGATACTACGATAGCCG+AGG | 0.654868 | 3_2:-69143767 | Msa0420560:CDS |
| GAAAGGGGTCGAAGCTAAGG+CGG | 0.668082 | 3_2:-69143726 | Msa0420560:CDS |
| AAGAGTGTAGTTGACTGGAG+GGG | 0.668565 | 3_2:-69144460 | Msa0420560:CDS |
| GAGCCAAGATGAGGGCGGTG+AGG | 0.675361 | 3_2:-69143633 | Msa0420560:intron |
| AAAATCGGAGAAGAAGAGCA+AGG | 0.676332 | 3_2:+69146539 | None:intergenic |
| GGACTCACTGACTCATTGCG+CGG | 0.685717 | 3_2:-69144634 | Msa0420560:CDS |
| AAATCACATTATGGTCCAGG+AGG | 0.693984 | 3_2:-69145733 | Msa0420560:CDS |
| AAATGGAGCCAAGATGAGGG+CGG | 0.711633 | 3_2:-69143638 | Msa0420560:CDS |
| GCGCGGTCTGTCTAGCACTG+AGG | 0.718490 | 3_2:-69144617 | Msa0420560:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAGCATAAAATTTAAATTA+CGG | - | chr3_2:69143194-69143213 | Msa0420560:three_prime_UTR | 10.0% |
| !!! | AATGCTTTAAAATATAAAAA+CGG | - | chr3_2:69144758-69144777 | Msa0420560:intron | 10.0% |
| !! | AAATTATAGTTATAAATTCA+AGG | + | chr3_2:69145106-69145125 | None:intergenic | 10.0% |
| !!! | TATTTTGAATATGTATATTA+AGG | - | chr3_2:69146462-69146481 | Msa0420560:intron | 10.0% |
| !! | TAGCATAAAATTTAAATTAC+GGG | - | chr3_2:69143195-69143214 | Msa0420560:three_prime_UTR | 15.0% |
| !!! | ATCTTTGATTGTTTTTTTAT+AGG | - | chr3_2:69143879-69143898 | Msa0420560:intron | 15.0% |
| !!! | ATTTAAAACATTAAGATGAT+GGG | + | chr3_2:69144416-69144435 | None:intergenic | 15.0% |
| !!! | AATTTAAAACATTAAGATGA+TGG | + | chr3_2:69144417-69144436 | None:intergenic | 15.0% |
| !!! | ATGCTTTAAAATATAAAAAC+GGG | - | chr3_2:69144759-69144778 | Msa0420560:intron | 15.0% |
| !! | AGCATAAAATTTAAATTACG+GGG | - | chr3_2:69143196-69143215 | Msa0420560:three_prime_UTR | 20.0% |
| !!! | TCAATTCAAGTTGAAAATTA+TGG | + | chr3_2:69143741-69143760 | None:intergenic | 20.0% |
| !! | TAGTTGAATTTCACTTTAAA+TGG | - | chr3_2:69144135-69144154 | Msa0420560:intron | 20.0% |
| !!! | GAATTATTTTCTTGGAATTT+GGG | + | chr3_2:69144259-69144278 | None:intergenic | 20.0% |
| !!! | AGAATTATTTTCTTGGAATT+TGG | + | chr3_2:69144260-69144279 | None:intergenic | 20.0% |
| !!! | ATTAGTCAGAATTATTTTCT+TGG | + | chr3_2:69144267-69144286 | None:intergenic | 20.0% |
| !! | ACTAAATGAAAGCAATATAT+GGG | - | chr3_2:69144488-69144507 | Msa0420560:intron | 20.0% |
| !! | TGATATACAAAAACAACTAA+AGG | + | chr3_2:69144627-69144646 | None:intergenic | 20.0% |
| !!! | TTACATTTTAACAACCTTAA+AGG | - | chr3_2:69144662-69144681 | Msa0420560:intron | 20.0% |
| !!! | GGTTAATCTAATCTTATTTT+TGG | + | chr3_2:69144809-69144828 | None:intergenic | 20.0% |
| !! | TGAAATGTTATAATATACCA+TGG | - | chr3_2:69144888-69144907 | Msa0420560:intron | 20.0% |
| !! | AGTACATATTATATTGTTCA+AGG | + | chr3_2:69144965-69144984 | None:intergenic | 20.0% |
| !! | TTAATTAACCTGAATTAATC+TGG | - | chr3_2:69145132-69145151 | Msa0420560:intron | 20.0% |
| !! | AATCCTACAAAATATTTGAA+AGG | - | chr3_2:69145916-69145935 | Msa0420560:intron | 20.0% |
| !! | ATCCTACAAAATATTTGAAA+GGG | - | chr3_2:69145917-69145936 | Msa0420560:intron | 20.0% |
| !! | TGCATATAAGTAATTGTTAT+CGG | + | chr3_2:69146137-69146156 | None:intergenic | 20.0% |
| !! | ATAAAATATGACGACAATTT+CGG | + | chr3_2:69146161-69146180 | None:intergenic | 20.0% |
| !!! | TCAATGTTTTTTATTCTCAA+TGG | - | chr3_2:69146567-69146586 | Msa0420560:CDS | 20.0% |
| !! | TACTTTATTTCTCTCTTTCT+TGG | - | chr3_2:69143418-69143437 | Msa0420560:intron | 25.0% |
| !! | ACTTTATTTCTCTCTTTCTT+GGG | - | chr3_2:69143419-69143438 | Msa0420560:intron | 25.0% |
| ! | TCAATTGACGTTGAAAATTA+TGG | - | chr3_2:69143553-69143572 | Msa0420560:intron | 25.0% |
| ! | TTGCAAATTTCTTAATTCGT+AGG | - | chr3_2:69143807-69143826 | Msa0420560:intron | 25.0% |
| ! | TACAAACTGAACAAAAACAT+GGG | + | chr3_2:69144004-69144023 | None:intergenic | 25.0% |
| ! | ATACAAACTGAACAAAAACA+TGG | + | chr3_2:69144005-69144024 | None:intergenic | 25.0% |
| ! | TTCAAATGGGTAAATTTCAT+TGG | + | chr3_2:69144035-69144054 | None:intergenic | 25.0% |
| ! | AGAAAAACATGAGTTCAAAT+GGG | + | chr3_2:69144048-69144067 | None:intergenic | 25.0% |
| ! | AAGAAAAACATGAGTTCAAA+TGG | + | chr3_2:69144049-69144068 | None:intergenic | 25.0% |
| !! | ATTTGAACTCATGTTTTTCT+TGG | - | chr3_2:69144048-69144067 | Msa0420560:intron | 25.0% |
| !! | ATTTTATCATCAAACCATTG+TGG | + | chr3_2:69144447-69144466 | None:intergenic | 25.0% |
| ! | GACTAAATGAAAGCAATATA+TGG | - | chr3_2:69144487-69144506 | Msa0420560:intron | 25.0% |
| ! | GATTCCAGAAAAATTAACAA+AGG | + | chr3_2:69144528-69144547 | None:intergenic | 25.0% |
| ! | AGAAATTGAGAACTCTAATT+AGG | + | chr3_2:69144550-69144569 | None:intergenic | 25.0% |
| ! | TGATGTTCTGATTTATCTAA+AGG | + | chr3_2:69144738-69144757 | None:intergenic | 25.0% |
| !!! | TCTTTAGAGTGAAAATTGAA+AGG | - | chr3_2:69144841-69144860 | Msa0420560:intron | 25.0% |
| ! | TTTCAAAACTAGATCTATAC+AGG | + | chr3_2:69144873-69144892 | None:intergenic | 25.0% |
| !! | TCAAGGAATAAATTGTTTCT+AGG | + | chr3_2:69144948-69144967 | None:intergenic | 25.0% |
| ! | ATAACTAATGTAACGTAAGA+AGG | + | chr3_2:69145341-69145360 | None:intergenic | 25.0% |
| ! | TTACGTTACATTAGTTATGA+TGG | - | chr3_2:69145343-69145362 | Msa0420560:intron | 25.0% |
| ! | ATCGTAGAAACTATATGATT+AGG | - | chr3_2:69145516-69145535 | Msa0420560:intron | 25.0% |
| ! | TCTCCTTAATACATAATCTA+CGG | + | chr3_2:69145567-69145586 | None:intergenic | 25.0% |
| !! | GTTTCTCTTATAGTTTTTCT+AGG | + | chr3_2:69145630-69145649 | None:intergenic | 25.0% |
| !! | TAGATAGATAGTCTGAAATA+TGG | - | chr3_2:69145700-69145719 | Msa0420560:intron | 25.0% |
| ! | ATGATTACAAATTAACACTC+TGG | + | chr3_2:69145732-69145751 | None:intergenic | 25.0% |
| ! | ATGCATGCTAATAGATTATT+AGG | - | chr3_2:69145773-69145792 | Msa0420560:intron | 25.0% |
| !!! | AAGTAAGGATAAGTATTGAA+GGG | + | chr3_2:69145842-69145861 | None:intergenic | 25.0% |
| !!! | AAAGTAAGGATAAGTATTGA+AGG | + | chr3_2:69145843-69145862 | None:intergenic | 25.0% |
| ! | TATCCTTACTTTACTTATGT+AGG | - | chr3_2:69145851-69145870 | Msa0420560:intron | 25.0% |
| ! | TCCTACAAAATATTTGAAAG+GGG | - | chr3_2:69145918-69145937 | Msa0420560:intron | 25.0% |
| ! | GAGAAATAGCATATGTTATT+GGG | + | chr3_2:69146114-69146133 | None:intergenic | 25.0% |
| ! | GCATATAAGTAATTGTTATC+GGG | + | chr3_2:69146136-69146155 | None:intergenic | 25.0% |
| ! | ATCAGGATTCTAATACAAAT+AGG | - | chr3_2:69146412-69146431 | Msa0420560:intron | 25.0% |
| !!! | TAGGAATTTTTTTGTTGTTG+AGG | - | chr3_2:69146431-69146450 | Msa0420560:intron | 25.0% |
| ! | TTTAATGAAGCTAGTAATTG+AGG | - | chr3_2:69146490-69146509 | Msa0420560:intron | 25.0% |
| CAATCCTTATAGGAATTCTT+GGG | - | chr3_2:69143391-69143410 | Msa0420560:CDS | 30.0% | |
| ATTAATCACCTGCAAAAGTA+TGG | - | chr3_2:69143525-69143544 | Msa0420560:intron | 30.0% | |
| ! | TGAATTAACCATACTTTTGC+AGG | + | chr3_2:69143536-69143555 | None:intergenic | 30.0% |
| !!! | AACCATAGTTTTAACTCACT+TGG | - | chr3_2:69143594-69143613 | Msa0420560:intron | 30.0% |
| ATCCAAGTGAGTTAAAACTA+TGG | + | chr3_2:69143599-69143618 | None:intergenic | 30.0% | |
| !!! | TAGTTTTAACTCACTTGGAT+TGG | - | chr3_2:69143599-69143618 | Msa0420560:intron | 30.0% |
| ! | ACCAATTTCAATGGTTAGTT+TGG | - | chr3_2:69143690-69143709 | Msa0420560:CDS | 30.0% |
| TAACCATCTACTACAAAAAG+TGG | - | chr3_2:69143763-69143782 | Msa0420560:CDS | 30.0% | |
| AACCATCTACTACAAAAAGT+GGG | - | chr3_2:69143764-69143783 | Msa0420560:CDS | 30.0% | |
| TCTTCATTTGTATCCTACAT+TGG | - | chr3_2:69144185-69144204 | Msa0420560:intron | 30.0% | |
| CAACAAAGTATAACCAATGT+AGG | + | chr3_2:69144201-69144220 | None:intergenic | 30.0% | |
| ! | GTGACCTTTGTTAATTTTTC+TGG | - | chr3_2:69144521-69144540 | Msa0420560:intron | 30.0% |
| !! | AGAATTTTTCTAGCATGAAG+TGG | + | chr3_2:69144593-69144612 | None:intergenic | 30.0% |
| !! | CAAAAGCAAAAGTACCTTTA+AGG | + | chr3_2:69144679-69144698 | None:intergenic | 30.0% |
| !! | AAGTTTTGGTAATAGTACCA+TGG | + | chr3_2:69144908-69144927 | None:intergenic | 30.0% |
| TCTATCTTCCAGATTAATTC+AGG | + | chr3_2:69145143-69145162 | None:intergenic | 30.0% | |
| ! | ACGCAGTTTAATTTAAGGTA+AGG | + | chr3_2:69145172-69145191 | None:intergenic | 30.0% |
| AAAACAAAGTAGCAGATTGA+AGG | + | chr3_2:69145259-69145278 | None:intergenic | 30.0% | |
| GATTAAAGATATGCTTGCTT+TGG | - | chr3_2:69145295-69145314 | Msa0420560:intron | 30.0% | |
| GTAGAAACTATATGATTAGG+TGG | - | chr3_2:69145519-69145538 | Msa0420560:intron | 30.0% | |
| CTCCTTAATACATAATCTAC+GGG | + | chr3_2:69145566-69145585 | None:intergenic | 30.0% | |
| AGATCTAGAGATTAATGAGT+TGG | - | chr3_2:69145659-69145678 | Msa0420560:intron | 30.0% | |
| ! | AATATTTTGTAGGATTCCCT+CGG | + | chr3_2:69145912-69145931 | None:intergenic | 30.0% |
| ! | ACCCCTTTCAAATATTTTGT+AGG | + | chr3_2:69145922-69145941 | None:intergenic | 30.0% |
| GGAGAAATAGCATATGTTAT+TGG | + | chr3_2:69146115-69146134 | None:intergenic | 30.0% | |
| ATAAATGCAGATTATGACAC+AGG | - | chr3_2:69146204-69146223 | Msa0420560:intron | 30.0% | |
| !!! | TTACATGTTTTGATCAGGTA+TGG | - | chr3_2:69146228-69146247 | Msa0420560:intron | 30.0% |
| AACAGATGCAAAGTTTAATC+AGG | - | chr3_2:69146395-69146414 | Msa0420560:intron | 30.0% | |
| !! | AGTGTGTTATTTGACAACAA+AGG | + | chr3_2:69146633-69146652 | None:intergenic | 30.0% |
| AAAAGAGCAAAACCGGTAAT+AGG | + | chr3_2:69143091-69143110 | None:intergenic | 35.0% | |
| CCAAGAATTCCTATAAGGAT+TGG | + | chr3_2:69143393-69143412 | None:intergenic | 35.0% | |
| CCAATCCTTATAGGAATTCT+TGG | - | chr3_2:69143390-69143409 | Msa0420560:CDS | 35.0% | |
| ! | TTATTTCTCTCTTTCTTGGG+TGG | - | chr3_2:69143422-69143441 | Msa0420560:intron | 35.0% |
| TATTTCTCTCTTTCTTGGGT+GGG | - | chr3_2:69143423-69143442 | Msa0420560:intron | 35.0% | |
| ! | TTCTCAATGGAACTGATTCT+TGG | - | chr3_2:69143453-69143472 | Msa0420560:intron | 35.0% |
| ! | TCTCAATGGAACTGATTCTT+GGG | - | chr3_2:69143454-69143473 | Msa0420560:intron | 35.0% |
| ! | AATTGGTGACCATGAAAGAT+TGG | + | chr3_2:69143483-69143502 | None:intergenic | 35.0% |
| GTAGCTGGTGTATGAAAAAT+TGG | + | chr3_2:69143500-69143519 | None:intergenic | 35.0% | |
| AACCATTGAAATTGGTACCT+AGG | + | chr3_2:69143686-69143705 | None:intergenic | 35.0% | |
| GCCAAACTAACCATTGAAAT+TGG | + | chr3_2:69143694-69143713 | None:intergenic | 35.0% | |
| TCTGTGTTTGATGTAACCAA+GGG | - | chr3_2:69143902-69143921 | Msa0420560:intron | 35.0% | |
| ACCAAGGGAAAATCACATTA+TGG | - | chr3_2:69143917-69143936 | Msa0420560:intron | 35.0% | |
| ! | ACCATAATGTGATTTTCCCT+TGG | + | chr3_2:69143921-69143940 | None:intergenic | 35.0% |
| ! | TGAACTCATGTTTTTCTTGG+TGG | - | chr3_2:69144051-69144070 | Msa0420560:intron | 35.0% |
| ! | GAACTCATGTTTTTCTTGGT+GGG | - | chr3_2:69144052-69144071 | Msa0420560:intron | 35.0% |
| ! | AACTCATGTTTTTCTTGGTG+GGG | - | chr3_2:69144053-69144072 | Msa0420560:intron | 35.0% |
| ! | TTCTTCTCTGGAAATTTCAC+AGG | - | chr3_2:69144107-69144126 | Msa0420560:intron | 35.0% |
| !!! | ACATGTCTACCTTGTTTTCA+CGG | - | chr3_2:69144323-69144342 | Msa0420560:intron | 35.0% |
| TTAAATTGCTACTGCCACAA+TGG | - | chr3_2:69144430-69144449 | Msa0420560:intron | 35.0% | |
| AACTAGATCTATACAGGACA+GGG | + | chr3_2:69144867-69144886 | None:intergenic | 35.0% | |
| AAACTAGATCTATACAGGAC+AGG | + | chr3_2:69144868-69144887 | None:intergenic | 35.0% | |
| ! | AGCAATAGCAGGAAAAGTTT+TGG | + | chr3_2:69144922-69144941 | None:intergenic | 35.0% |
| ! | TTCCCTTTTGTTGATCATGT+AGG | - | chr3_2:69144998-69145017 | Msa0420560:intron | 35.0% |
| CTCCTACATGATCAACAAAA+GGG | + | chr3_2:69145003-69145022 | None:intergenic | 35.0% | |
| TCTCCTACATGATCAACAAA+AGG | + | chr3_2:69145004-69145023 | None:intergenic | 35.0% | |
| TTTGTTGATCATGTAGGAGA+TGG | - | chr3_2:69145004-69145023 | Msa0420560:intron | 35.0% | |
| AAATTCAAGGAGAGAAGAAC+AGG | + | chr3_2:69145093-69145112 | None:intergenic | 35.0% | |
| ! | AAAGATATGCTTGCTTTGGA+AGG | - | chr3_2:69145299-69145318 | Msa0420560:intron | 35.0% |
| TTATGAGCATAGCAGAGATA+AGG | - | chr3_2:69145402-69145421 | Msa0420560:intron | 35.0% | |
| GACCCGTAGATTATGTATTA+AGG | - | chr3_2:69145561-69145580 | Msa0420560:CDS | 35.0% | |
| AAGGAGAGTAGATCAAATAG+AGG | - | chr3_2:69145580-69145599 | Msa0420560:intron | 35.0% | |
| AGGAGAGTAGATCAAATAGA+GGG | - | chr3_2:69145581-69145600 | Msa0420560:intron | 35.0% | |
| AAATAGAGGGTAGTCAAATG+AGG | - | chr3_2:69145594-69145613 | Msa0420560:intron | 35.0% | |
| AATAGAGGGTAGTCAAATGA+GGG | - | chr3_2:69145595-69145614 | Msa0420560:intron | 35.0% | |
| TTCAGACTATCTATCTAGAC+TGG | + | chr3_2:69145697-69145716 | None:intergenic | 35.0% | |
| AGGCCTACATAAGTAAAGTA+AGG | + | chr3_2:69145857-69145876 | None:intergenic | 35.0% | |
| AGAAAAGCAGAAGATTGAAG+AGG | - | chr3_2:69145975-69145994 | Msa0420560:intron | 35.0% | |
| AACCTCAATGCAGTTCAAAA+TGG | - | chr3_2:69146004-69146023 | Msa0420560:intron | 35.0% | |
| TAATCTGCATTTATGCAGGT+AGG | + | chr3_2:69146198-69146217 | None:intergenic | 35.0% | |
| GTCATAATCTGCATTTATGC+AGG | + | chr3_2:69146202-69146221 | None:intergenic | 35.0% | |
| !!! | CAGGTTTACATGTTTTGATC+AGG | - | chr3_2:69146223-69146242 | Msa0420560:intron | 35.0% |
| AAACTTTGCATCTGTTAGCA+TGG | + | chr3_2:69146391-69146410 | None:intergenic | 35.0% | |
| CTAGCAACTTCTCCTATTAC+CGG | - | chr3_2:69143076-69143095 | Msa0420560:three_prime_UTR | 40.0% | |
| AAGGACGAAAAGAGCAAAAC+CGG | + | chr3_2:69143098-69143117 | None:intergenic | 40.0% | |
| AAAATCGGAGAAGAAGAGCA+AGG | + | chr3_2:69143123-69143142 | None:intergenic | 40.0% | |
| ! | CCTGTGAAGTGATGGAAAAT+CGG | + | chr3_2:69143138-69143157 | None:intergenic | 40.0% |
| AAAAGTGACCTGTGAAGTGA+TGG | + | chr3_2:69143146-69143165 | None:intergenic | 40.0% | |
| GAAGAGCTTGCATTGTTCAA+TGG | - | chr3_2:69143351-69143370 | Msa0420560:CDS | 40.0% | |
| TTGTTCAATGGAACTGATCC+AGG | - | chr3_2:69143363-69143382 | Msa0420560:CDS | 40.0% | |
| TGTTCAATGGAACTGATCCA+GGG | - | chr3_2:69143364-69143383 | Msa0420560:CDS | 40.0% | |
| TCCTTATAGGAATTCTTGGG+TGG | - | chr3_2:69143394-69143413 | Msa0420560:CDS | 40.0% | |
| CCTTATAGGAATTCTTGGGT+GGG | - | chr3_2:69143395-69143414 | Msa0420560:CDS | 40.0% | |
| GGTGGGTACTTTATTCTCAA+TGG | - | chr3_2:69143440-69143459 | Msa0420560:intron | 40.0% | |
| GGTGATTAATCAAGTGTAGC+TGG | + | chr3_2:69143515-69143534 | None:intergenic | 40.0% | |
| !! | TTAACTCACTTGGATTGGTC+AGG | - | chr3_2:69143604-69143623 | Msa0420560:intron | 40.0% |
| TGTGCTCTTCTTAAGGTCTT+AGG | - | chr3_2:69143651-69143670 | Msa0420560:CDS | 40.0% | |
| CTCCTAGGTACCAATTTCAA+TGG | - | chr3_2:69143681-69143700 | Msa0420560:CDS | 40.0% | |
| !!! | CACCCACTTTTTGTAGTAGA+TGG | + | chr3_2:69143769-69143788 | None:intergenic | 40.0% |
| GTCTGTGTTTGATGTAACCA+AGG | - | chr3_2:69143901-69143920 | Msa0420560:intron | 40.0% | |
| GGAAAATCACATTATGGTCC+AGG | - | chr3_2:69143923-69143942 | Msa0420560:intron | 40.0% | |
| AAATCACATTATGGTCCAGG+AGG | - | chr3_2:69143926-69143945 | Msa0420560:intron | 40.0% | |
| GTTATCATCACTTTGCTGGA+AGG | - | chr3_2:69143951-69143970 | Msa0420560:intron | 40.0% | |
| AACAAAAACATGGGTGAAGC+AGG | + | chr3_2:69143995-69144014 | None:intergenic | 40.0% | |
| GTGGGGATTTCATGATTTCA+GGG | - | chr3_2:69144070-69144089 | Msa0420560:intron | 40.0% | |
| ATTGCAACACCGTGAAAACA+AGG | + | chr3_2:69144335-69144354 | None:intergenic | 40.0% | |
| ! | CTCTAAAGAAACTGCAGCTA+GGG | + | chr3_2:69144830-69144849 | None:intergenic | 40.0% |
| ! | ACTCTAAAGAAACTGCAGCT+AGG | + | chr3_2:69144831-69144850 | None:intergenic | 40.0% |
| ! | CCTGCACGCAGTTTAATTTA+AGG | + | chr3_2:69145177-69145196 | None:intergenic | 40.0% |
| CCTTAAATTAAACTGCGTGC+AGG | - | chr3_2:69145174-69145193 | Msa0420560:intron | 40.0% | |
| !! | TATGCTTGCTTTGGAAGGAT+AGG | - | chr3_2:69145304-69145323 | Msa0420560:intron | 40.0% |
| ! | GGAAGTGTGGTAAGACTAAA+CGG | - | chr3_2:69145435-69145454 | Msa0420560:intron | 40.0% |
| GAAGTGTGGTAAGACTAAAC+GGG | - | chr3_2:69145436-69145455 | Msa0420560:intron | 40.0% | |
| ATGACGACATTAGAGAGAGT+TGG | - | chr3_2:69145471-69145490 | Msa0420560:intron | 40.0% | |
| TGACGACATTAGAGAGAGTT+GGG | - | chr3_2:69145472-69145491 | Msa0420560:intron | 40.0% | |
| TCTACGATCTTTGCTACTGA+AGG | + | chr3_2:69145504-69145523 | None:intergenic | 40.0% | |
| CTTTACTTATGTAGGCCTGT+TGG | - | chr3_2:69145859-69145878 | Msa0420560:intron | 40.0% | |
| ! | CTCCATTTTGAACTGCATTG+AGG | + | chr3_2:69146009-69146028 | None:intergenic | 40.0% |
| TTCAAAATGGAGCCAAGATG+AGG | - | chr3_2:69146017-69146036 | Msa0420560:intron | 40.0% | |
| TCAAAATGGAGCCAAGATGA+GGG | - | chr3_2:69146018-69146037 | Msa0420560:intron | 40.0% | |
| CCACTAGAAATTGCTTTGAC+CGG | - | chr3_2:69146284-69146303 | Msa0420560:CDS | 40.0% | |
| CACTAGAAATTGCTTTGACC+GGG | - | chr3_2:69146285-69146304 | Msa0420560:CDS | 40.0% | |
| !! | TGCTTTGAAGAGTCTCAGTT+AGG | - | chr3_2:69146329-69146348 | Msa0420560:intron | 40.0% |
| !! | GCTTTGAAGAGTCTCAGTTA+GGG | - | chr3_2:69146330-69146349 | Msa0420560:intron | 40.0% |
| TACGATCCTCACACAGAACA+AGG | - | chr3_2:69143036-69143055 | Msa0420560:three_prime_UTR | 45.0% | |
| GGAGAAGAAGAGCAAGGAAA+AGG | + | chr3_2:69143117-69143136 | None:intergenic | 45.0% | |
| ! | CCGATTTTCCATCACTTCAC+AGG | - | chr3_2:69143135-69143154 | Msa0420560:three_prime_UTR | 45.0% |
| CCCACCCAAGAATTCCTATA+AGG | + | chr3_2:69143398-69143417 | None:intergenic | 45.0% | |
| ! | CTTGGGTTGCCAATCTTTCA+TGG | - | chr3_2:69143471-69143490 | Msa0420560:intron | 45.0% |
| ! | CTTAAGAAGAGCACAGTCCA+AGG | + | chr3_2:69143646-69143665 | None:intergenic | 45.0% |
| CTTGGACTGTGCTCTTCTTA+AGG | - | chr3_2:69143644-69143663 | Msa0420560:CDS | 45.0% | |
| GTCTTAGGTTCGATTCTCCT+AGG | - | chr3_2:69143666-69143685 | Msa0420560:CDS | 45.0% | |
| AAGTGATGATAACCTCCTCC+TGG | + | chr3_2:69143944-69143963 | None:intergenic | 45.0% | |
| GGAGGTTATCATCACTTTGC+TGG | - | chr3_2:69143947-69143966 | Msa0420560:intron | 45.0% | |
| AACATGGGTGAAGCAGGAAA+GGG | + | chr3_2:69143989-69144008 | None:intergenic | 45.0% | |
| AAACATGGGTGAAGCAGGAA+AGG | + | chr3_2:69143990-69144009 | None:intergenic | 45.0% | |
| GGTGGGGATTTCATGATTTC+AGG | - | chr3_2:69144069-69144088 | Msa0420560:intron | 45.0% | |
| ! | TTTCTAGGAGCAGCAATAGC+AGG | + | chr3_2:69144933-69144952 | None:intergenic | 45.0% |
| ! | AGGTCAAGAGTGTAGTTGAC+TGG | - | chr3_2:69145194-69145213 | Msa0420560:intron | 45.0% |
| ! | TCAAGAGTGTAGTTGACTGG+AGG | - | chr3_2:69145197-69145216 | Msa0420560:intron | 45.0% |
| ! | CAAGAGTGTAGTTGACTGGA+GGG | - | chr3_2:69145198-69145217 | Msa0420560:intron | 45.0% |
| ! | AAGAGTGTAGTTGACTGGAG+GGG | - | chr3_2:69145199-69145218 | Msa0420560:intron | 45.0% |
| ! | CATAACAGTGCAAGAGCATG+TGG | + | chr3_2:69145387-69145406 | None:intergenic | 45.0% |
| CAGAGATAAGGTAGTTGCGT+TGG | - | chr3_2:69145414-69145433 | Msa0420560:intron | 45.0% | |
| GTGGTAAGACTAAACGGGAT+AGG | - | chr3_2:69145441-69145460 | Msa0420560:intron | 45.0% | |
| GACGACATTAGAGAGAGTTG+GGG | - | chr3_2:69145473-69145492 | Msa0420560:intron | 45.0% | |
| TTTGAAAGGGGTCGAAGCTA+AGG | - | chr3_2:69145930-69145949 | Msa0420560:intron | 45.0% | |
| GATCAGGTATGGTGTGATGT+TGG | - | chr3_2:69146239-69146258 | Msa0420560:intron | 45.0% | |
| GTGGTCTCTTAACCAACCTA+GGG | + | chr3_2:69146268-69146287 | None:intergenic | 45.0% | |
| AGTGGTCTCTTAACCAACCT+AGG | + | chr3_2:69146269-69146288 | None:intergenic | 45.0% | |
| ! | CCGGTCAAAGCAATTTCTAG+TGG | + | chr3_2:69146287-69146306 | None:intergenic | 45.0% |
| ACAACGCTTACTCATCTTCC+CGG | + | chr3_2:69146306-69146325 | None:intergenic | 45.0% | |
| CCTTCATATACCTCTAACCC+AGG | + | chr3_2:69146359-69146378 | None:intergenic | 45.0% | |
| ! | CCTGGGTTAGAGGTATATGA+AGG | - | chr3_2:69146356-69146375 | Msa0420560:intron | 45.0% |
| !! | AAAAATAAAATAAAAATTGT+TGG | + | chr3_2:69143174-69143193 | None:intergenic | 5.0% |
| ! | TCATCGCCTTGTTCTGTGTG+AGG | + | chr3_2:69143045-69143064 | None:intergenic | 50.0% |
| ! | CCTATAAGGATTGGCAACCC+TGG | + | chr3_2:69143384-69143403 | None:intergenic | 50.0% |
| CCAGGGTTGCCAATCCTTAT+AGG | - | chr3_2:69143381-69143400 | Msa0420560:CDS | 50.0% | |
| !! | GTAGTGTTGACCTGAGACCT+TGG | - | chr3_2:69143626-69143645 | Msa0420560:intron | 50.0% |
| TCACATTATGGTCCAGGAGG+AGG | - | chr3_2:69143929-69143948 | Msa0420560:intron | 50.0% | |
| AGGTAGTTGCGTTGGAAGTG+TGG | - | chr3_2:69145422-69145441 | Msa0420560:intron | 50.0% | |
| AGGGTAGTCAAATGAGGGAG+AGG | - | chr3_2:69145600-69145619 | Msa0420560:intron | 50.0% | |
| AGGCCTGTTGGCAAGTTAGT+TGG | - | chr3_2:69145871-69145890 | Msa0420560:intron | 50.0% | |
| ! | CGACCAACTAACTTGCCAAC+AGG | + | chr3_2:69145877-69145896 | None:intergenic | 50.0% |
| GTCGATACTACGATAGCCGA+GGG | - | chr3_2:69145893-69145912 | Msa0420560:intron | 50.0% | |
| AAATGGAGCCAAGATGAGGG+CGG | - | chr3_2:69146021-69146040 | Msa0420560:intron | 50.0% | |
| ! | TGATGTTGGCTACCCTAGGT+TGG | - | chr3_2:69146253-69146272 | Msa0420560:intron | 50.0% |
| AGTCTCAGTTAGGGCAACCT+GGG | - | chr3_2:69146339-69146358 | Msa0420560:intron | 50.0% | |
| AGAGCACAGTCCAAGGTCTC+AGG | + | chr3_2:69143639-69143658 | None:intergenic | 55.0% | |
| GCTTCTCGCGCTTTCTTCTC+TGG | - | chr3_2:69144095-69144114 | Msa0420560:intron | 55.0% | |
| !! | GGACTCACTGACTCATTGCG+CGG | - | chr3_2:69145025-69145044 | Msa0420560:intron | 55.0% |
| GGTCGATACTACGATAGCCG+AGG | - | chr3_2:69145892-69145911 | Msa0420560:intron | 55.0% | |
| GAAAGGGGTCGAAGCTAAGG+CGG | - | chr3_2:69145933-69145952 | Msa0420560:intron | 55.0% | |
| ATACCTCACCGCCCTCATCT+TGG | + | chr3_2:69146032-69146051 | None:intergenic | 55.0% | |
| GGGCGGTGAGGTATAGACTA+TGG | - | chr3_2:69146038-69146057 | Msa0420560:intron | 55.0% | |
| ! | GGTGTGATGTTGGCTACCCT+AGG | - | chr3_2:69146249-69146268 | Msa0420560:intron | 55.0% |
| GAGTCTCAGTTAGGGCAACC+TGG | - | chr3_2:69146338-69146357 | Msa0420560:intron | 55.0% | |
| ! | GTTAGGGCAACCTGGGTTAG+AGG | - | chr3_2:69146346-69146365 | Msa0420560:intron | 55.0% |
| GTCGAAGCTAAGGCGGCAAG+AGG | - | chr3_2:69145940-69145959 | Msa0420560:intron | 60.0% | |
| GCGCGGTCTGTCTAGCACTG+AGG | - | chr3_2:69145042-69145061 | Msa0420560:intron | 65.0% | |
| GAGCCAAGATGAGGGCGGTG+AGG | - | chr3_2:69146026-69146045 | Msa0420560:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 69143025 | 69146656 | 69143025 | ID=Msa0420560;Name=Msa0420560 |
| chr3_2 | mRNA | 69143025 | 69146656 | 69143025 | ID=Msa0420560-mRNA-1;Parent=Msa0420560;Name=Msa0420560-mRNA-1;_AED=0.08;_eAED=0.08;_QI=36|1|1|1|1|1|8|244|238 |
| chr3_2 | exon | 69143025 | 69143436 | 69143025 | ID=Msa0420560-mRNA-1:exon:16419;Parent=Msa0420560-mRNA-1 |
| chr3_2 | exon | 69143634 | 69143808 | 69143634 | ID=Msa0420560-mRNA-1:exon:16418;Parent=Msa0420560-mRNA-1 |
| chr3_2 | exon | 69144439 | 69144485 | 69144439 | ID=Msa0420560-mRNA-1:exon:16417;Parent=Msa0420560-mRNA-1 |
| chr3_2 | exon | 69144618 | 69144661 | 69144618 | ID=Msa0420560-mRNA-1:exon:16416;Parent=Msa0420560-mRNA-1 |
| chr3_2 | exon | 69145553 | 69145590 | 69145553 | ID=Msa0420560-mRNA-1:exon:16415;Parent=Msa0420560-mRNA-1 |
| chr3_2 | exon | 69145709 | 69145780 | 69145709 | ID=Msa0420560-mRNA-1:exon:16414;Parent=Msa0420560-mRNA-1 |
| chr3_2 | exon | 69146269 | 69146345 | 69146269 | ID=Msa0420560-mRNA-1:exon:16413;Parent=Msa0420560-mRNA-1 |
| chr3_2 | exon | 69146525 | 69146656 | 69146525 | ID=Msa0420560-mRNA-1:exon:16412;Parent=Msa0420560-mRNA-1 |
| chr3_2 | five_prime_UTR | 69146621 | 69146656 | 69146621 | ID=Msa0420560-mRNA-1:five_prime_utr;Parent=Msa0420560-mRNA-1 |
| chr3_2 | CDS | 69146525 | 69146620 | 69146525 | ID=Msa0420560-mRNA-1:cds;Parent=Msa0420560-mRNA-1 |
| chr3_2 | CDS | 69146269 | 69146345 | 69146269 | ID=Msa0420560-mRNA-1:cds;Parent=Msa0420560-mRNA-1 |
| chr3_2 | CDS | 69145709 | 69145780 | 69145709 | ID=Msa0420560-mRNA-1:cds;Parent=Msa0420560-mRNA-1 |
| chr3_2 | CDS | 69145553 | 69145590 | 69145553 | ID=Msa0420560-mRNA-1:cds;Parent=Msa0420560-mRNA-1 |
| chr3_2 | CDS | 69144618 | 69144661 | 69144618 | ID=Msa0420560-mRNA-1:cds;Parent=Msa0420560-mRNA-1 |
| chr3_2 | CDS | 69144439 | 69144485 | 69144439 | ID=Msa0420560-mRNA-1:cds;Parent=Msa0420560-mRNA-1 |
| chr3_2 | CDS | 69143634 | 69143808 | 69143634 | ID=Msa0420560-mRNA-1:cds;Parent=Msa0420560-mRNA-1 |
| chr3_2 | CDS | 69143269 | 69143436 | 69143269 | ID=Msa0420560-mRNA-1:cds;Parent=Msa0420560-mRNA-1 |
| chr3_2 | three_prime_UTR | 69143025 | 69143268 | 69143025 | ID=Msa0420560-mRNA-1:three_prime_utr;Parent=Msa0420560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
