Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0306710 | XP_024625123.1 | 76.812 | 207 | 9 | 2 | 1 | 171 | 1 | 204 | 5.98e-101 | 299 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0306710 | sp|Q67XT3|SPC24_ARATH | 33.824 | 204 | 93 | 3 | 3 | 170 | 2 | 199 | 9.41e-33 | 118 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0306710 | G7IET0 | 76.699 | 206 | 10 | 2 | 1 | 171 | 1 | 203 | 7.65e-101 | 298 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003640 | Msa0306710 | 0.817930 | 2.554442e-52 | -8.615850e-47 |
| Msa0004980 | Msa0306710 | 0.805733 | 1.157455e-49 | -8.615850e-47 |
| Msa0013050 | Msa0306710 | -0.829303 | 5.552078e-55 | -8.615850e-47 |
| Msa0021810 | Msa0306710 | 0.800430 | 1.446304e-48 | -8.615850e-47 |
| Msa0032580 | Msa0306710 | 0.823262 | 1.523044e-53 | -8.615850e-47 |
| Msa0037540 | Msa0306710 | -0.817846 | 2.667758e-52 | -8.615850e-47 |
| Msa0037590 | Msa0306710 | -0.815426 | 9.303698e-52 | -8.615850e-47 |
| Msa0047280 | Msa0306710 | 0.810263 | 1.257406e-50 | -8.615850e-47 |
| Msa0058300 | Msa0306710 | 0.825552 | 4.404397e-54 | -8.615850e-47 |
| Msa0083310 | Msa0306710 | 0.803458 | 3.452153e-49 | -8.615850e-47 |
| Msa0089660 | Msa0306710 | 0.809315 | 2.010686e-50 | -8.615850e-47 |
| Msa0091570 | Msa0306710 | 0.809882 | 1.518943e-50 | -8.615850e-47 |
| Msa0097850 | Msa0306710 | 0.805486 | 1.304062e-49 | -8.615850e-47 |
| Msa0098480 | Msa0306710 | 0.801306 | 9.580626e-49 | -8.615850e-47 |
| Msa0099220 | Msa0306710 | 0.804001 | 2.663820e-49 | -8.615850e-47 |
| Msa0104700 | Msa0306710 | 0.812849 | 3.447478e-51 | -8.615850e-47 |
| Msa0115390 | Msa0306710 | 0.800892 | 1.164709e-48 | -8.615850e-47 |
| Msa0121590 | Msa0306710 | 0.802031 | 6.803431e-49 | -8.615850e-47 |
| Msa0129190 | Msa0306710 | -0.808009 | 3.823598e-50 | -8.615850e-47 |
| Msa0135380 | Msa0306710 | 0.808505 | 2.996598e-50 | -8.615850e-47 |
| Msa0138630 | Msa0306710 | 0.803382 | 3.580750e-49 | -8.615850e-47 |
| Msa0139990 | Msa0306710 | 0.813200 | 2.887403e-51 | -8.615850e-47 |
| Msa0145730 | Msa0306710 | 0.828122 | 1.071631e-54 | -8.615850e-47 |
| Msa0150990 | Msa0306710 | 0.800346 | 1.505011e-48 | -8.615850e-47 |
| Msa0159340 | Msa0306710 | 0.819083 | 1.399049e-52 | -8.615850e-47 |
| Msa0160550 | Msa0306710 | 0.821082 | 4.876481e-53 | -8.615850e-47 |
| Msa0171540 | Msa0306710 | 0.805198 | 1.498795e-49 | -8.615850e-47 |
| Msa0172970 | Msa0306710 | 0.828934 | 6.820250e-55 | -8.615850e-47 |
| Msa0183460 | Msa0306710 | 0.803481 | 3.414964e-49 | -8.615850e-47 |
| Msa0197890 | Msa0306710 | 0.815894 | 7.318136e-52 | -8.615850e-47 |
| Msa0208220 | Msa0306710 | 0.810550 | 1.090474e-50 | -8.615850e-47 |
| Msa0208350 | Msa0306710 | 0.808643 | 2.800623e-50 | -8.615850e-47 |
| Msa0220720 | Msa0306710 | 0.801950 | 7.069363e-49 | -8.615850e-47 |
| Msa0226460 | Msa0306710 | 0.810128 | 1.344779e-50 | -8.615850e-47 |
| Msa0236270 | Msa0306710 | 0.826029 | 3.395143e-54 | -8.615850e-47 |
| Msa0245310 | Msa0306710 | 0.804873 | 1.753024e-49 | -8.615850e-47 |
| Msa0255080 | Msa0306710 | 0.800553 | 1.365523e-48 | -8.615850e-47 |
| Msa0259160 | Msa0306710 | 0.809930 | 1.483227e-50 | -8.615850e-47 |
| Msa0259210 | Msa0306710 | 0.801191 | 1.011715e-48 | -8.615850e-47 |
| Msa0262050 | Msa0306710 | 0.815467 | 9.109042e-52 | -8.615850e-47 |
| Msa0262310 | Msa0306710 | 0.816234 | 6.142850e-52 | -8.615850e-47 |
| Msa0279700 | Msa0306710 | 0.805652 | 1.204032e-49 | -8.615850e-47 |
| Msa0306710 | Msa0317250 | 0.818194 | 2.225641e-52 | -8.615850e-47 |
| Msa0306710 | Msa0337240 | 0.810804 | 9.606989e-51 | -8.615850e-47 |
| Msa0306710 | Msa0347680 | 0.807166 | 5.772941e-50 | -8.615850e-47 |
| Msa0306710 | Msa0369220 | 0.815247 | 1.019675e-51 | -8.615850e-47 |
| Msa0306710 | Msa0372340 | 0.826065 | 3.328906e-54 | -8.615850e-47 |
| Msa0306710 | Msa0420560 | 0.801667 | 8.080759e-49 | -8.615850e-47 |
| Msa0306710 | Msa0423040 | 0.804923 | 1.710647e-49 | -8.615850e-47 |
| Msa0306710 | Msa0429950 | 0.812314 | 4.512311e-51 | -8.615850e-47 |
| Msa0306710 | Msa0432770 | 0.819866 | 9.275322e-53 | -8.615850e-47 |
| Msa0306710 | Msa0450480 | 0.808636 | 2.809328e-50 | -8.615850e-47 |
| Msa0306710 | Msa0466250 | 0.804400 | 2.199684e-49 | -8.615850e-47 |
| Msa0306710 | Msa0480000 | 0.818010 | 2.450048e-52 | -8.615850e-47 |
| Msa0306710 | Msa0500720 | 0.803830 | 2.890153e-49 | -8.615850e-47 |
| Msa0306710 | Msa0506400 | 0.822769 | 1.984011e-53 | -8.615850e-47 |
| Msa0306710 | Msa0508590 | 0.810045 | 1.401286e-50 | -8.615850e-47 |
| Msa0306710 | Msa0508870 | 0.842868 | 1.987370e-58 | -8.615850e-47 |
| Msa0306710 | Msa0510350 | 0.801656 | 8.125210e-49 | -8.615850e-47 |
| Msa0306710 | Msa0511310 | 0.802544 | 5.333971e-49 | -8.615850e-47 |
| Msa0306710 | Msa0541360 | 0.825019 | 5.888104e-54 | -8.615850e-47 |
| Msa0306710 | Msa0584860 | 0.801434 | 9.022419e-49 | -8.615850e-47 |
| Msa0306710 | Msa0610430 | 0.802387 | 5.746624e-49 | -8.615850e-47 |
| Msa0306710 | Msa0615490 | 0.801719 | 7.886807e-49 | -8.615850e-47 |
| Msa0306710 | Msa0616240 | 0.852304 | 5.040342e-61 | -8.615850e-47 |
| Msa0306710 | Msa0626910 | 0.819474 | 1.139785e-52 | -8.615850e-47 |
| Msa0306710 | Msa0641670 | 0.825126 | 5.556379e-54 | -8.615850e-47 |
| Msa0306710 | Msa0643560 | 0.818851 | 1.579388e-52 | -8.615850e-47 |
| Msa0306710 | Msa0643570 | 0.800160 | 1.641842e-48 | -8.615850e-47 |
| Msa0306710 | Msa0644660 | 0.802355 | 5.834618e-49 | -8.615850e-47 |
| Msa0306710 | Msa0677290 | 0.806349 | 8.587537e-50 | -8.615850e-47 |
| Msa0306710 | Msa0677770 | 0.805052 | 1.608265e-49 | -8.615850e-47 |
| Msa0306710 | Msa0683170 | 0.814771 | 1.299912e-51 | -8.615850e-47 |
| Msa0306710 | Msa0688390 | 0.807389 | 5.175803e-50 | -8.615850e-47 |
| Msa0306710 | Msa0688960 | 0.803818 | 2.906965e-49 | -8.615850e-47 |
| Msa0306710 | Msa0692830 | 0.805471 | 1.313848e-49 | -8.615850e-47 |
| Msa0306710 | Msa0698540 | 0.805930 | 1.052560e-49 | -8.615850e-47 |
| Msa0306710 | Msa0699570 | 0.851380 | 9.217330e-61 | -8.615850e-47 |
| Msa0306710 | Msa0701920 | 0.803453 | 3.460349e-49 | -8.615850e-47 |
| Msa0306710 | Msa0716840 | 0.817514 | 3.169875e-52 | -8.615850e-47 |
| Msa0306710 | Msa0719420 | 0.804507 | 2.089989e-49 | -8.615850e-47 |
| Msa0306710 | Msa0784860 | 0.826638 | 2.430395e-54 | -8.615850e-47 |
| Msa0306710 | Msa0789680 | 0.806527 | 7.879554e-50 | -8.615850e-47 |
| Msa0306710 | Msa0802410 | 0.804488 | 2.108705e-49 | -8.615850e-47 |
| Msa0306710 | Msa0808270 | 0.801550 | 8.539157e-49 | -8.615850e-47 |
| Msa0306710 | Msa0812570 | 0.802737 | 4.868461e-49 | -8.615850e-47 |
| Msa0306710 | Msa0813740 | 0.812186 | 4.813070e-51 | -8.615850e-47 |
| Msa0306710 | Msa0816730 | 0.811851 | 5.692196e-51 | -8.615850e-47 |
| Msa0306710 | Msa0848530 | 0.802437 | 5.612872e-49 | -8.615850e-47 |
| Msa0306710 | Msa0850960 | 0.824774 | 6.727018e-54 | -8.615850e-47 |
| Msa0306710 | Msa0870150 | 0.805419 | 1.347236e-49 | -8.615850e-47 |
| Msa0306710 | Msa0900110 | 0.810263 | 1.257124e-50 | -8.615850e-47 |
| Msa0306710 | Msa0944190 | 0.806577 | 7.690095e-50 | -8.615850e-47 |
| Msa0306710 | Msa0944610 | 0.804765 | 1.846167e-49 | -8.615850e-47 |
| Msa0306710 | Msa0970420 | 0.804196 | 2.425974e-49 | -8.615850e-47 |
| Msa0306710 | Msa0999970 | 0.822093 | 2.847961e-53 | -8.615850e-47 |
| Msa0306710 | Msa1009820 | 0.818444 | 1.954097e-52 | -8.615850e-47 |
| Msa0306710 | Msa1030620 | 0.801483 | 8.813558e-49 | -8.615850e-47 |
| Msa0306710 | Msa1037420 | 0.833869 | 4.161706e-56 | -8.615850e-47 |
| Msa0306710 | Msa1039140 | 0.824579 | 7.478927e-54 | -8.615850e-47 |
| Msa0306710 | Msa1051200 | 0.821510 | 3.885492e-53 | -8.615850e-47 |
| Msa0306710 | Msa1064250 | 0.816342 | 5.810048e-52 | -8.615850e-47 |
| Msa0306710 | Msa1071530 | 0.804584 | 2.013741e-49 | -8.615850e-47 |
| Msa0306710 | Msa1084470 | 0.828773 | 7.462014e-55 | -8.615850e-47 |
| Msa0306710 | Msa1087710 | 0.801631 | 8.220854e-49 | -8.615850e-47 |
| Msa0306710 | Msa1104210 | 0.804835 | 1.784855e-49 | -8.615850e-47 |
| Msa0306710 | Msa1106700 | 0.817187 | 3.755955e-52 | -8.615850e-47 |
| Msa0306710 | Msa1123810 | 0.827621 | 1.414099e-54 | -8.615850e-47 |
| Msa0306710 | Msa1131560 | 0.814592 | 1.424237e-51 | -8.615850e-47 |
| Msa0306710 | Msa1136540 | 0.819447 | 1.155969e-52 | -8.615850e-47 |
| Msa0306710 | Msa1137700 | 0.816542 | 5.240942e-52 | -8.615850e-47 |
| Msa0306710 | Msa1138870 | 0.811045 | 8.518067e-51 | -8.615850e-47 |
| Msa0306710 | Msa1163540 | 0.825956 | 3.531698e-54 | -8.615850e-47 |
| Msa0306710 | Msa1171870 | 0.805967 | 1.033696e-49 | -8.615850e-47 |
| Msa0306710 | Msa1204890 | 0.822648 | 2.116407e-53 | -8.615850e-47 |
| Msa0306710 | Msa1224810 | 0.806875 | 6.651060e-50 | -8.615850e-47 |
| Msa0306710 | Msa1263020 | 0.805627 | 1.218377e-49 | -8.615850e-47 |
| Msa0306710 | Msa1274560 | 0.806126 | 9.569107e-50 | -8.615850e-47 |
| Msa0306710 | Msa1287460 | 0.803150 | 3.998262e-49 | -8.615850e-47 |
| Msa0306710 | Msa1306430 | 0.807479 | 4.954100e-50 | -8.615850e-47 |
| Msa0306710 | Msa1306560 | 0.816587 | 5.121792e-52 | -8.615850e-47 |
| Msa0306710 | Msa1307600 | 0.815891 | 7.327152e-52 | -8.615850e-47 |
| Msa0306710 | Msa1323990 | 0.805899 | 1.068355e-49 | -8.615850e-47 |
| Msa0306710 | Msa1340470 | 0.806917 | 6.517693e-50 | -8.615850e-47 |
| Msa0306710 | Msa1371430 | 0.802132 | 6.487380e-49 | -8.615850e-47 |
| Msa0306710 | Msa1375380 | 0.800232 | 1.587212e-48 | -8.615850e-47 |
| Msa0306710 | Msa1385100 | 0.834090 | 3.665191e-56 | -8.615850e-47 |
| Msa0306710 | Msa1385770 | 0.806382 | 8.451992e-50 | -8.615850e-47 |
| Msa0306710 | Msa1406040 | 0.801921 | 7.166412e-49 | -8.615850e-47 |
| Msa0306710 | Msa1409240 | 0.804149 | 2.480885e-49 | -8.615850e-47 |
| Msa0306710 | Msa1415640 | 0.817736 | 2.824588e-52 | -8.615850e-47 |
| Msa0306710 | Msa1430120 | 0.809699 | 1.663128e-50 | -8.615850e-47 |
| Msa0306710 | Msa1430280 | 0.805466 | 1.317048e-49 | -8.615850e-47 |
| Msa0306710 | Msa1434140 | 0.807475 | 4.963564e-50 | -8.615850e-47 |
| Msa0306710 | Msa1442700 | 0.817661 | 2.937041e-52 | -8.615850e-47 |
| Msa0306710 | Msa1454450 | 0.809901 | 1.504402e-50 | -8.615850e-47 |
| Msa0306710 | Msa1460740 | 0.815742 | 7.911011e-52 | -8.615850e-47 |
| Msa0306710 | Msa1461490 | 0.819261 | 1.274322e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0306710 | MtrunA17_Chr1g0203021 | 76.699 | 206 | 10 | 2 | 1 | 171 | 1 | 203 | 1.47e-104 | 298 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0306710 | AT3G08880.1 | 33.824 | 204 | 93 | 3 | 3 | 170 | 2 | 199 | 9.56e-34 | 118 |
| Msa0306710 | AT5G01570.3 | 32.353 | 204 | 93 | 7 | 4 | 170 | 3 | 198 | 1.38e-21 | 87.0 |
| Msa0306710 | AT5G01570.2 | 32.353 | 204 | 93 | 7 | 4 | 170 | 3 | 198 | 1.38e-21 | 87.0 |
| Msa0306710 | AT5G01570.5 | 32.178 | 202 | 92 | 7 | 4 | 168 | 3 | 196 | 4.18e-20 | 83.2 |
| Msa0306710 | AT5G01570.1 | 31.818 | 198 | 90 | 7 | 4 | 164 | 3 | 192 | 7.49e-19 | 80.5 |
Find 46 sgRNAs with CRISPR-Local
Find 281 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGAATTGAGTTTGAAAAT+TGG | 0.247906 | 2_3:-65833363 | None:intergenic |
| TTCTTCTTCTTCCACATAAA+TGG | 0.260196 | 2_3:+65833434 | Msa0306710:exon |
| GAGAATTGAGTTTGAAAATT+GGG | 0.282802 | 2_3:-65833362 | None:intergenic |
| ATTGGAAGAAGAAGCGAAAT+TGG | 0.296363 | 2_3:-65833384 | None:intergenic |
| AATTGAGCATTGAACTTTGT+TGG | 0.296615 | 2_3:-65837407 | None:intergenic |
| TTTGACTGATCATCCAAGTT+TGG | 0.336279 | 2_3:-65837068 | None:intergenic |
| CACGAATATTGTTCCAAACT+TGG | 0.342485 | 2_3:+65837055 | Msa0306710:CDS |
| AACTCAATATTGAAATTGTA+AGG | 0.372422 | 2_3:-65837437 | None:intergenic |
| CTCATTGAGGTCAGAGTGGC+TGG | 0.375458 | 2_3:-65833601 | None:intergenic |
| GACTGCTGCTGATGCGGATC+TGG | 0.380027 | 2_3:+65836200 | Msa0306710:CDS |
| TGTTGACTACTTAGTTTCTC+TGG | 0.380494 | 2_3:+65837459 | Msa0306710:three_prime_UTR |
| CTCAAATTGAGTGCTATGTT+AGG | 0.393782 | 2_3:+65837381 | Msa0306710:three_prime_UTR |
| ATCTAAACTCCTCTTTCAAC+AGG | 0.403143 | 2_3:-65836266 | None:intergenic |
| AATTGCAGATATTGTTGAAA+AGG | 0.411581 | 2_3:+65837216 | Msa0306710:intron |
| TTGATGTATGTAATGACATC+TGG | 0.434943 | 2_3:+65837290 | Msa0306710:CDS |
| CTTAGTGAGGTCATTGCCTA+TGG | 0.453395 | 2_3:-65833499 | None:intergenic |
| GTCGAAGTTTCTAGAAGAAT+CGG | 0.487528 | 2_3:-65833460 | None:intergenic |
| GTGTTTCCCTCCCACTCAAA+GGG | 0.487914 | 2_3:+65833327 | Msa0306710:five_prime_UTR |
| CATAGGCAATGACCTCACTA+AGG | 0.499057 | 2_3:+65833500 | Msa0306710:CDS |
| GTGTACATCTTCACATGGTT+TGG | 0.501267 | 2_3:+65837483 | Msa0306710:three_prime_UTR |
| CTGGTGTGTACATCTTCACA+TGG | 0.502955 | 2_3:+65837478 | Msa0306710:three_prime_UTR |
| AGAATTGAGTTTGAAAATTG+GGG | 0.503979 | 2_3:-65833361 | None:intergenic |
| GTTGAGATCACGGTCATTAG+TGG | 0.510091 | 2_3:-65833535 | None:intergenic |
| CACGTCAAACATGTCTCTGT+TGG | 0.511307 | 2_3:+65837333 | Msa0306710:three_prime_UTR |
| GCTTCTTCTTCCAATTTCGA+AGG | 0.532125 | 2_3:+65833392 | Msa0306710:five_prime_UTR |
| GTGGATCAGCTTATTTCCAT+AGG | 0.536627 | 2_3:+65833483 | Msa0306710:CDS |
| ATCTGAGACTGCTGCTGATG+CGG | 0.539806 | 2_3:+65836194 | Msa0306710:CDS |
| AGAGTGGCTGGAAGAAGAAA+CGG | 0.541444 | 2_3:-65833589 | None:intergenic |
| AAAAGAACGCCTGTTGAAAG+AGG | 0.543828 | 2_3:+65836257 | Msa0306710:CDS |
| AGTGTTTCCCTCCCACTCAA+AGG | 0.564858 | 2_3:+65833326 | Msa0306710:five_prime_UTR |
| GAGGTTCTCTCCTCGTTCCA+AGG | 0.565622 | 2_3:+65833621 | Msa0306710:CDS |
| GAGAGAGGATGTTGAGATCA+CGG | 0.580539 | 2_3:-65833545 | None:intergenic |
| AAGAAACGGAGAGTGTGTGG+TGG | 0.583118 | 2_3:-65833575 | None:intergenic |
| AGAATCGGAAGCCATTTATG+TGG | 0.590207 | 2_3:-65833445 | None:intergenic |
| TTGAGATCACGGTCATTAGT+GGG | 0.593698 | 2_3:-65833534 | None:intergenic |
| AGATGTCATTACATACATCA+AGG | 0.596678 | 2_3:-65837288 | None:intergenic |
| GTGGAAGAAGAAGAAGACGA+AGG | 0.600373 | 2_3:-65833426 | None:intergenic |
| TGTGGTGGAGACATTGAGAG+AGG | 0.630170 | 2_3:-65833560 | None:intergenic |
| AGTAAATTGACCTTGGAACG+AGG | 0.633269 | 2_3:-65833631 | None:intergenic |
| CAGCCACTCTGACCTCAATG+AGG | 0.636008 | 2_3:+65833602 | Msa0306710:CDS |
| ACGAGGAGAGAACCTCATTG+AGG | 0.656992 | 2_3:-65833614 | None:intergenic |
| TGTTTCCCTCCCACTCAAAG+GGG | 0.687364 | 2_3:+65833328 | Msa0306710:five_prime_UTR |
| AAGAAGAAACGGAGAGTGTG+TGG | 0.703735 | 2_3:-65833578 | None:intergenic |
| GATCTTGCAAAACCTTAGTG+AGG | 0.708093 | 2_3:-65833512 | None:intergenic |
| GAACCTCATTGAGGTCAGAG+TGG | 0.709107 | 2_3:-65833605 | None:intergenic |
| TTCTTCTAGAAACTTCGACG+TGG | 0.712488 | 2_3:+65833464 | Msa0306710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTATAT+TGG | + | chr2_3:65833743-65833762 | Msa0306710:intron | 0.0% |
| !!! | TTTTTTTTTTTTTTTATATT+GGG | + | chr2_3:65833744-65833763 | Msa0306710:intron | 0.0% |
| !!! | TTTAAAATGAACATAAATTT+TGG | - | chr2_3:65836557-65836576 | None:intergenic | 10.0% |
| !!! | ATTTGATAGTAAGAAAAAAT+TGG | + | chr2_3:65833879-65833898 | Msa0306710:intron | 15.0% |
| !!! | TTTGATAGTAAGAAAAAATT+GGG | + | chr2_3:65833880-65833899 | Msa0306710:intron | 15.0% |
| !! | ACATAGTTAAGTAATAATAA+TGG | + | chr2_3:65834211-65834230 | Msa0306710:intron | 15.0% |
| !! | ATATACAAATAAAAATAAGC+TGG | - | chr2_3:65835895-65835914 | None:intergenic | 15.0% |
| !!! | ACATAATTGATTTATTTCAA+CGG | + | chr2_3:65835931-65835950 | Msa0306710:intron | 15.0% |
| !! | ATATAAGTTCCAATTTATAT+GGG | - | chr2_3:65836986-65837005 | None:intergenic | 15.0% |
| !! | AATATAAGTTCCAATTTATA+TGG | - | chr2_3:65836987-65837006 | None:intergenic | 15.0% |
| !!! | TTATTCTTATATTTTGTTTC+AGG | + | chr2_3:65837006-65837025 | Msa0306710:intron | 15.0% |
| !! | AACAGCAAATAAATAATGAT+GGG | - | chr2_3:65833789-65833808 | None:intergenic | 20.0% |
| !! | AAACAGCAAATAAATAATGA+TGG | - | chr2_3:65833790-65833809 | None:intergenic | 20.0% |
| !! | ATTTGGTATGTTATGTTTAT+TGG | + | chr2_3:65833951-65833970 | Msa0306710:intron | 20.0% |
| !! | TTTGGTATGTTATGTTTATT+GGG | + | chr2_3:65833952-65833971 | Msa0306710:intron | 20.0% |
| !! | AGAGTATAACTATGTAAAAA+TGG | + | chr2_3:65834111-65834130 | Msa0306710:intron | 20.0% |
| !!! | TAAAGCAATGCTTTAAAATA+TGG | + | chr2_3:65834332-65834351 | Msa0306710:intron | 20.0% |
| !! | TGATAATTAGTAAAGTTCAT+TGG | + | chr2_3:65834399-65834418 | Msa0306710:intron | 20.0% |
| !! | GATAATTAGTAAAGTTCATT+GGG | + | chr2_3:65834400-65834419 | Msa0306710:intron | 20.0% |
| !!! | AGTTAGAACTTTTTGTAAAA+TGG | + | chr2_3:65834498-65834517 | Msa0306710:intron | 20.0% |
| !!! | GTTAGAACTTTTTGTAAAAT+GGG | + | chr2_3:65834499-65834518 | Msa0306710:intron | 20.0% |
| !! | TAAGTTTATGAATGAAATTG+AGG | + | chr2_3:65835109-65835128 | Msa0306710:intron | 20.0% |
| !! | ATTCACCAAAATTAATAGAT+TGG | + | chr2_3:65835265-65835284 | Msa0306710:intron | 20.0% |
| !!! | TGAGTGTGTTTTTTTTTTTT+TGG | + | chr2_3:65835378-65835397 | Msa0306710:intron | 20.0% |
| !! | ATATACAACTTTCCAATTAA+GGG | - | chr2_3:65835612-65835631 | None:intergenic | 20.0% |
| !! | TATATACAACTTTCCAATTA+AGG | - | chr2_3:65835613-65835632 | None:intergenic | 20.0% |
| !! | TAATTGGAAAGTTGTATATA+AGG | + | chr2_3:65835613-65835632 | Msa0306710:intron | 20.0% |
| !!! | ATTAGAAGAAATTGATTTTG+AGG | + | chr2_3:65835662-65835681 | Msa0306710:intron | 20.0% |
| !! | AACAAGAATGATGATTATAT+TGG | + | chr2_3:65835726-65835745 | Msa0306710:intron | 20.0% |
| !! | AATGATGATTATATTGGAAA+AGG | + | chr2_3:65835732-65835751 | Msa0306710:intron | 20.0% |
| !! | ATGATGATTATATTGGAAAA+GGG | + | chr2_3:65835733-65835752 | Msa0306710:intron | 20.0% |
| !! | TAAAAGGAATTACTTTAGAT+GGG | - | chr2_3:65836039-65836058 | None:intergenic | 20.0% |
| !!! | ATGTTTTTAGAAAGTAAACA+GGG | - | chr2_3:65836518-65836537 | None:intergenic | 20.0% |
| !!! | AATGTTTTTAGAAAGTAAAC+AGG | - | chr2_3:65836519-65836538 | None:intergenic | 20.0% |
| !! | AGCTATACATAATATATTTC+CGG | + | chr2_3:65836642-65836661 | Msa0306710:intron | 20.0% |
| !!! | AAACAATGAAAACAATGTTT+TGG | + | chr2_3:65836665-65836684 | Msa0306710:intron | 20.0% |
| !! | ACAGAAATTGTAAAAGAAAA+TGG | + | chr2_3:65836724-65836743 | Msa0306710:intron | 20.0% |
| !! | TTTACATTTCCCATATAAAT+TGG | + | chr2_3:65836974-65836993 | Msa0306710:intron | 20.0% |
| !! | ATATCTGCAATTAAAGTTTA+AGG | - | chr2_3:65837208-65837227 | None:intergenic | 20.0% |
| !! | AACTCAATATTGAAATTGTA+AGG | - | chr2_3:65837440-65837459 | None:intergenic | 20.0% |
| ! | AGAATTGAGTTTGAAAATTG+GGG | - | chr2_3:65833364-65833383 | None:intergenic | 25.0% |
| ! | GAGAATTGAGTTTGAAAATT+GGG | - | chr2_3:65833365-65833384 | None:intergenic | 25.0% |
| !!! | TAATTATTTTGTGGCAGAAA+CGG | - | chr2_3:65833679-65833698 | None:intergenic | 25.0% |
| ! | TTTCTGCCACAAAATAATTA+TGG | + | chr2_3:65833679-65833698 | Msa0306710:intron | 25.0% |
| ! | TTCTGCCACAAAATAATTAT+GGG | + | chr2_3:65833680-65833699 | Msa0306710:intron | 25.0% |
| !! | TACTTTGCTAATTTTGTGTT+TGG | + | chr2_3:65833825-65833844 | Msa0306710:intron | 25.0% |
| ! | AATGTTTCTTACACTTATTG+TGG | + | chr2_3:65833920-65833939 | Msa0306710:intron | 25.0% |
| !! | CAATTGGGATTGTTATTATA+TGG | + | chr2_3:65833975-65833994 | Msa0306710:intron | 25.0% |
| ! | GTTATTATATGGAGAACTAT+TGG | + | chr2_3:65833986-65834005 | Msa0306710:intron | 25.0% |
| !! | CTCTTTTTATATCATTGTCT+TGG | + | chr2_3:65834174-65834193 | Msa0306710:intron | 25.0% |
| !!! | GCTTTAAAATATGGAAATAG+CGG | + | chr2_3:65834341-65834360 | Msa0306710:intron | 25.0% |
| ! | TTATCATCAAAATCTACGTA+CGG | - | chr2_3:65834385-65834404 | None:intergenic | 25.0% |
| !! | ATCTCAAAATAATTGCTGTT+TGG | + | chr2_3:65834656-65834675 | Msa0306710:intron | 25.0% |
| !! | GTAATTTTGTCTAAGAAACA+CGG | + | chr2_3:65834820-65834839 | Msa0306710:intron | 25.0% |
| !! | TAATTTTGTCTAAGAAACAC+GGG | + | chr2_3:65834821-65834840 | Msa0306710:intron | 25.0% |
| !! | AGCAGAAATAAAATGGTTTT+TGG | + | chr2_3:65834938-65834957 | Msa0306710:intron | 25.0% |
| !! | GCAGAAATAAAATGGTTTTT+GGG | + | chr2_3:65834939-65834958 | Msa0306710:intron | 25.0% |
| ! | TTCAAAATACAAGTTTGATC+TGG | + | chr2_3:65835191-65835210 | Msa0306710:intron | 25.0% |
| !!! | CTGGTATAGTTTTATTTATG+AGG | + | chr2_3:65835454-65835473 | Msa0306710:intron | 25.0% |
| ! | TTTATGAGGACTATGTTATT+TGG | + | chr2_3:65835468-65835487 | Msa0306710:intron | 25.0% |
| !! | TTCTAATTCTCATTGAGTTT+TGG | - | chr2_3:65835649-65835668 | None:intergenic | 25.0% |
| ! | TGATGATTATATTGGAAAAG+GGG | + | chr2_3:65835734-65835753 | Msa0306710:intron | 25.0% |
| ! | CTAAAAGGAATTACTTTAGA+TGG | - | chr2_3:65836040-65836059 | None:intergenic | 25.0% |
| !! | AACATTGTTTTCATTGTTTC+CGG | - | chr2_3:65836664-65836683 | None:intergenic | 25.0% |
| ! | AATTGTAAAAGAAAATGGTG+AGG | + | chr2_3:65836729-65836748 | Msa0306710:intron | 25.0% |
| ! | AACAAATAGCAATACATATG+AGG | - | chr2_3:65836850-65836869 | None:intergenic | 25.0% |
| !! | AACAATTCTTGTCTTTTCAA+AGG | - | chr2_3:65837181-65837200 | None:intergenic | 25.0% |
| ! | AATTGCAGATATTGTTGAAA+AGG | + | chr2_3:65837216-65837235 | Msa0306710:intron | 25.0% |
| ! | TGTTGAAAAGGAAAAAAATG+CGG | + | chr2_3:65837228-65837247 | Msa0306710:CDS | 25.0% |
| GGAGAATTGAGTTTGAAAAT+TGG | - | chr2_3:65833366-65833385 | None:intergenic | 30.0% | |
| ! | TTTTCTCTTTCCTTCGAAAT+TGG | - | chr2_3:65833405-65833424 | None:intergenic | 30.0% |
| TTCTTCTTCTTCCACATAAA+TGG | + | chr2_3:65833434-65833453 | Msa0306710:exon | 30.0% | |
| TCTGCCACAAAATAATTATG+GGG | + | chr2_3:65833681-65833700 | Msa0306710:intron | 30.0% | |
| !! | CAAACCCCATAATTATTTTG+TGG | - | chr2_3:65833688-65833707 | None:intergenic | 30.0% |
| ! | TATATTGGGTTTGCGATTTT+TGG | + | chr2_3:65833758-65833777 | Msa0306710:intron | 30.0% |
| !!! | TTATTTGCTGTTTGTGCTTT+TGG | + | chr2_3:65833797-65833816 | Msa0306710:intron | 30.0% |
| TTATTGTGGCTGTGATTATT+TGG | + | chr2_3:65833934-65833953 | Msa0306710:intron | 30.0% | |
| TGTTATGTTTATTGGGCAAT+TGG | + | chr2_3:65833959-65833978 | Msa0306710:intron | 30.0% | |
| GTTATGTTTATTGGGCAATT+GGG | + | chr2_3:65833960-65833979 | Msa0306710:intron | 30.0% | |
| TATATGGAGAACTATTGGAT+TGG | + | chr2_3:65833991-65834010 | Msa0306710:intron | 30.0% | |
| AGATGTTGCATGTGTAATTA+AGG | + | chr2_3:65834062-65834081 | Msa0306710:intron | 30.0% | |
| AACTATGTAAAAATGGAGTG+TGG | + | chr2_3:65834118-65834137 | Msa0306710:intron | 30.0% | |
| TTATATCATTGTCTTGGATG+TGG | + | chr2_3:65834180-65834199 | Msa0306710:intron | 30.0% | |
| AAGTTCACTTGTAGTTTAAC+TGG | + | chr2_3:65834264-65834283 | Msa0306710:intron | 30.0% | |
| ! | AACTTTTTGTAAAATGGGTG+TGG | + | chr2_3:65834504-65834523 | Msa0306710:intron | 30.0% |
| !!! | CAATATTTTGGTTGGACAAA+TGG | + | chr2_3:65834715-65834734 | Msa0306710:intron | 30.0% |
| TCTCCAACATCTATCTTTAA+AGG | - | chr2_3:65834754-65834773 | None:intergenic | 30.0% | |
| ! | GAAAAAGAGGTTGTTTCAAA+GGG | + | chr2_3:65834860-65834879 | Msa0306710:intron | 30.0% |
| GTGGAAAAGCAGAAATAAAA+TGG | + | chr2_3:65834931-65834950 | Msa0306710:intron | 30.0% | |
| GTAAAATCACATTGTGGAAT+AGG | + | chr2_3:65834998-65835017 | Msa0306710:intron | 30.0% | |
| GTTTATGAATGAAATTGAGG+TGG | + | chr2_3:65835112-65835131 | Msa0306710:intron | 30.0% | |
| AAAATACAAGTTTGATCTGG+TGG | + | chr2_3:65835194-65835213 | Msa0306710:intron | 30.0% | |
| CACCAAAATTAATAGATTGG+AGG | + | chr2_3:65835268-65835287 | Msa0306710:intron | 30.0% | |
| ! | CACCTCCAATCTATTAATTT+TGG | - | chr2_3:65835273-65835292 | None:intergenic | 30.0% |
| CAAAATTAATAGATTGGAGG+TGG | + | chr2_3:65835271-65835290 | Msa0306710:intron | 30.0% | |
| ATGGTTATTAGAGTTTACCT+TGG | + | chr2_3:65835422-65835441 | Msa0306710:intron | 30.0% | |
| ! | GACTATGTTATTTGGTTGAA+GGG | + | chr2_3:65835476-65835495 | Msa0306710:intron | 30.0% |
| TGGAAAGTTGTATATAAGGA+TGG | + | chr2_3:65835617-65835636 | Msa0306710:intron | 30.0% | |
| !!! | TTCTCATTGAGTTTTGGTTT+TGG | - | chr2_3:65835643-65835662 | None:intergenic | 30.0% |
| GATTTATTTCAACGGATATG+TGG | + | chr2_3:65835939-65835958 | Msa0306710:intron | 30.0% | |
| AATCTGATTCAACTAAGCAT+TGG | - | chr2_3:65836128-65836147 | None:intergenic | 30.0% | |
| ! | ATGACTGTGTTGATACAAAA+TGG | - | chr2_3:65836369-65836388 | None:intergenic | 30.0% |
| ! | GTAATTTCTTTTTCTGCTCT+CGG | - | chr2_3:65836434-65836453 | None:intergenic | 30.0% |
| CAATTGTAATAGAGAGAAGA+TGG | + | chr2_3:65836612-65836631 | Msa0306710:intron | 30.0% | |
| GAAAATGGTGAGGAAAATAT+TGG | + | chr2_3:65836739-65836758 | Msa0306710:intron | 30.0% | |
| TCATGTTCGCATCAATATTA+TGG | + | chr2_3:65836872-65836891 | Msa0306710:intron | 30.0% | |
| ! | ACAAGAACTGTTTTCAGTTT+GGG | - | chr2_3:65836952-65836971 | None:intergenic | 30.0% |
| ! | AACAAGAACTGTTTTCAGTT+TGG | - | chr2_3:65836953-65836972 | None:intergenic | 30.0% |
| GATGATCAGTCAAAAATTTC+AGG | + | chr2_3:65837077-65837096 | Msa0306710:CDS | 30.0% | |
| AGAATGGTAAACTCAACAAA+AGG | - | chr2_3:65837109-65837128 | None:intergenic | 30.0% | |
| AAAACCTGAAGAAGAAACAT+GGG | - | chr2_3:65837138-65837157 | None:intergenic | 30.0% | |
| AGATGTCATTACATACATCA+AGG | - | chr2_3:65837291-65837310 | None:intergenic | 30.0% | |
| TTGATGTATGTAATGACATC+TGG | + | chr2_3:65837290-65837309 | Msa0306710:CDS | 30.0% | |
| !! | AATTGAGCATTGAACTTTGT+TGG | - | chr2_3:65837410-65837429 | None:intergenic | 30.0% |
| !!! | TCTTTTTTTCCCCTTTGAGT+GGG | - | chr2_3:65833340-65833359 | None:intergenic | 35.0% |
| !!! | TTCTTTTTTTCCCCTTTGAG+TGG | - | chr2_3:65833341-65833360 | None:intergenic | 35.0% |
| ATTGGAAGAAGAAGCGAAAT+TGG | - | chr2_3:65833387-65833406 | None:intergenic | 35.0% | |
| ! | GTCGAAGTTTCTAGAAGAAT+CGG | - | chr2_3:65833463-65833482 | None:intergenic | 35.0% |
| GCAAAAGAGTAAATTGACCT+TGG | - | chr2_3:65833641-65833660 | None:intergenic | 35.0% | |
| ! | GAGAACTATTGGATTGGAAT+TGG | + | chr2_3:65833997-65834016 | Msa0306710:intron | 35.0% |
| AAACTACACACGAACAGTAA+GGG | - | chr2_3:65834025-65834044 | None:intergenic | 35.0% | |
| TAAACTACACACGAACAGTA+AGG | - | chr2_3:65834026-65834045 | None:intergenic | 35.0% | |
| CTTGTAGTTTAACTGGAAGT+AGG | + | chr2_3:65834271-65834290 | Msa0306710:intron | 35.0% | |
| CTGTTTGGATAGAATGAGAA+AGG | + | chr2_3:65834671-65834690 | Msa0306710:intron | 35.0% | |
| !!! | CAGCTAGACAATATTTTGGT+TGG | + | chr2_3:65834707-65834726 | Msa0306710:intron | 35.0% |
| TTGGACAAATGGATAGTAGA+TGG | + | chr2_3:65834726-65834745 | Msa0306710:intron | 35.0% | |
| ! | GCACCTTTAAAGATAGATGT+TGG | + | chr2_3:65834748-65834767 | Msa0306710:intron | 35.0% |
| ! | GGAAAAAGAGGTTGTTTCAA+AGG | + | chr2_3:65834859-65834878 | Msa0306710:intron | 35.0% |
| GAATCGGTAAAATCACATTG+TGG | + | chr2_3:65834992-65835011 | Msa0306710:intron | 35.0% | |
| GCTACTCAATTCCTAGAATT+TGG | - | chr2_3:65835032-65835051 | None:intergenic | 35.0% | |
| TTGAGTAGCCAATATCTCAA+TGG | + | chr2_3:65835043-65835062 | Msa0306710:intron | 35.0% | |
| TGAATGAAATTGAGGTGGTA+TGG | + | chr2_3:65835117-65835136 | Msa0306710:intron | 35.0% | |
| AGAAAGTAGATCATAGGAAG+TGG | + | chr2_3:65835218-65835237 | Msa0306710:intron | 35.0% | |
| GAAAGTAGATCATAGGAAGT+GGG | + | chr2_3:65835219-65835238 | Msa0306710:intron | 35.0% | |
| AATTAATAGATTGGAGGTGG+TGG | + | chr2_3:65835274-65835293 | Msa0306710:intron | 35.0% | |
| CCTGTAGAATTCTACATGAT+GGG | + | chr2_3:65835324-65835343 | Msa0306710:intron | 35.0% | |
| GTTATCTTGCAAGAATCAGA+TGG | + | chr2_3:65835403-65835422 | Msa0306710:intron | 35.0% | |
| ! | GGACTATGTTATTTGGTTGA+AGG | + | chr2_3:65835475-65835494 | Msa0306710:intron | 35.0% |
| ! | TATGTTATTTGGTTGAAGGG+TGG | + | chr2_3:65835479-65835498 | Msa0306710:intron | 35.0% |
| !! | ATTAAGGGCATCATCATAGT+AGG | - | chr2_3:65835597-65835616 | None:intergenic | 35.0% |
| ! | ACTATGATGATGCCCTTAAT+TGG | + | chr2_3:65835597-65835616 | Msa0306710:intron | 35.0% |
| GACAAAAGATCTATTCATCC+TGG | - | chr2_3:65835761-65835780 | None:intergenic | 35.0% | |
| AATTCAGCTATGTGGAATAC+CGG | - | chr2_3:65835975-65835994 | None:intergenic | 35.0% | |
| GAAGCAAAAATTCAGCTATG+TGG | - | chr2_3:65835983-65836002 | None:intergenic | 35.0% | |
| TGGCTATTAATAGTGCATCA+CGG | - | chr2_3:65836016-65836035 | None:intergenic | 35.0% | |
| AAGGAATTACTTTAGATGGG+TGG | - | chr2_3:65836036-65836055 | None:intergenic | 35.0% | |
| TATGAGCTAGTTGAGCTAAA+AGG | - | chr2_3:65836055-65836074 | None:intergenic | 35.0% | |
| ! | TAGCATGCTCAATTTTCTGT+TGG | - | chr2_3:65836173-65836192 | None:intergenic | 35.0% |
| ATCTAAACTCCTCTTTCAAC+AGG | - | chr2_3:65836269-65836288 | None:intergenic | 35.0% | |
| AAATTGAGCAAGAAAAGCAG+AGG | + | chr2_3:65836457-65836476 | Msa0306710:intron | 35.0% | |
| TGAGAAACATGAGAAGTAAC+AGG | + | chr2_3:65836805-65836824 | Msa0306710:intron | 35.0% | |
| CACGAATATTGTTCCAAACT+TGG | + | chr2_3:65837055-65837074 | Msa0306710:CDS | 35.0% | |
| TTTGACTGATCATCCAAGTT+TGG | - | chr2_3:65837071-65837090 | None:intergenic | 35.0% | |
| AAACCTGAAGAAGAAACATG+GGG | - | chr2_3:65837137-65837156 | None:intergenic | 35.0% | |
| GAAAACCTGAAGAAGAAACA+TGG | - | chr2_3:65837139-65837158 | None:intergenic | 35.0% | |
| TGAAAAGGAAAAAAATGCGG+CGG | + | chr2_3:65837231-65837250 | Msa0306710:CDS | 35.0% | |
| CTCAAATTGAGTGCTATGTT+AGG | + | chr2_3:65837381-65837400 | Msa0306710:three_prime_UTR | 35.0% | |
| ! | TGTTGACTACTTAGTTTCTC+TGG | + | chr2_3:65837459-65837478 | Msa0306710:three_prime_UTR | 35.0% |
| GCTTCTTCTTCCAATTTCGA+AGG | + | chr2_3:65833392-65833411 | Msa0306710:five_prime_UTR | 40.0% | |
| AGAATCGGAAGCCATTTATG+TGG | - | chr2_3:65833448-65833467 | None:intergenic | 40.0% | |
| ! | TTCTTCTAGAAACTTCGACG+TGG | + | chr2_3:65833464-65833483 | Msa0306710:CDS | 40.0% |
| GTGGATCAGCTTATTTCCAT+AGG | + | chr2_3:65833483-65833502 | Msa0306710:CDS | 40.0% | |
| GATCTTGCAAAACCTTAGTG+AGG | - | chr2_3:65833515-65833534 | None:intergenic | 40.0% | |
| TTGAGATCACGGTCATTAGT+GGG | - | chr2_3:65833537-65833556 | None:intergenic | 40.0% | |
| AGTAAATTGACCTTGGAACG+AGG | - | chr2_3:65833634-65833653 | None:intergenic | 40.0% | |
| GAAACGGAGAAGAGAGAATA+GGG | - | chr2_3:65833663-65833682 | None:intergenic | 40.0% | |
| AGAAACGGAGAAGAGAGAAT+AGG | - | chr2_3:65833664-65833683 | None:intergenic | 40.0% | |
| AAGTTCATTGGGTCGTTAGT+TGG | + | chr2_3:65834411-65834430 | Msa0306710:intron | 40.0% | |
| AGTTCATTGGGTCGTTAGTT+GGG | + | chr2_3:65834412-65834431 | Msa0306710:intron | 40.0% | |
| AGAGTGTGTTGAGAGAGATA+TGG | + | chr2_3:65834437-65834456 | Msa0306710:intron | 40.0% | |
| GAGTGTGTTGAGAGAGATAT+GGG | + | chr2_3:65834438-65834457 | Msa0306710:intron | 40.0% | |
| AGTGTGTTGAGAGAGATATG+GGG | + | chr2_3:65834439-65834458 | Msa0306710:intron | 40.0% | |
| ! | AAGACAACTTTTGTGCGCAA+AGG | + | chr2_3:65834541-65834560 | Msa0306710:intron | 40.0% |
| GCTAAATATGGAAGGCAAGA+TGG | + | chr2_3:65834572-65834591 | Msa0306710:intron | 40.0% | |
| !! | TGGTTGGTAATGATTCCAGT+TGG | + | chr2_3:65834603-65834622 | Msa0306710:intron | 40.0% |
| !! | TTGGTAATGATTCCAGTTGG+TGG | + | chr2_3:65834606-65834625 | Msa0306710:intron | 40.0% |
| AGACATCAAAGCGATGGAAA+AGG | + | chr2_3:65834631-65834650 | Msa0306710:intron | 40.0% | |
| GACATCAAAGCGATGGAAAA+GGG | + | chr2_3:65834632-65834651 | Msa0306710:intron | 40.0% | |
| ! | GTGGCAGCTAGACAATATTT+TGG | + | chr2_3:65834703-65834722 | Msa0306710:intron | 40.0% |
| TACCATAGCAAACAACAACG+AGG | + | chr2_3:65834779-65834798 | Msa0306710:intron | 40.0% | |
| TTGTCTAAGAAACACGGGAA+TGG | + | chr2_3:65834826-65834845 | Msa0306710:intron | 40.0% | |
| TGGGAGAAAATCATTCGAGT+TGG | + | chr2_3:65834958-65834977 | Msa0306710:intron | 40.0% | |
| !! | ATTCGAGTTGGACGAGATAT+TGG | + | chr2_3:65834970-65834989 | Msa0306710:intron | 40.0% |
| GTTGGACGAGATATTGGAAT+CGG | + | chr2_3:65834976-65834995 | Msa0306710:intron | 40.0% | |
| ! | CACATTGTGGAATAGGTTGA+AGG | + | chr2_3:65835005-65835024 | Msa0306710:intron | 40.0% |
| AGGTTGAAGGTCCAAATTCT+AGG | + | chr2_3:65835018-65835037 | Msa0306710:intron | 40.0% | |
| TGCTCAGCCTTTAGTATGTT+TGG | + | chr2_3:65835066-65835085 | Msa0306710:intron | 40.0% | |
| GCTCAGCCTTTAGTATGTTT+GGG | + | chr2_3:65835067-65835086 | Msa0306710:intron | 40.0% | |
| CTCAGCCTTTAGTATGTTTG+GGG | + | chr2_3:65835068-65835087 | Msa0306710:intron | 40.0% | |
| TTGAGGTGGTATGGTTTAAC+AGG | + | chr2_3:65835126-65835145 | Msa0306710:intron | 40.0% | |
| AACAGGAAACAGTTGTATCG+TGG | + | chr2_3:65835143-65835162 | Msa0306710:intron | 40.0% | |
| ACAGGAAACAGTTGTATCGT+GGG | + | chr2_3:65835144-65835163 | Msa0306710:intron | 40.0% | |
| TAGAATTCTACAGGCTTCCA+CGG | - | chr2_3:65835318-65835337 | None:intergenic | 40.0% | |
| GCCTGTAGAATTCTACATGA+TGG | + | chr2_3:65835323-65835342 | Msa0306710:intron | 40.0% | |
| CCCATCATGTAGAATTCTAC+AGG | - | chr2_3:65835327-65835346 | None:intergenic | 40.0% | |
| !! | ACATGATGGGCTTGTCAATA+TGG | + | chr2_3:65835337-65835356 | Msa0306710:intron | 40.0% |
| TTTACCTTGGCATTGTGTTC+TGG | + | chr2_3:65835435-65835454 | Msa0306710:intron | 40.0% | |
| TATACCAGAACACAATGCCA+AGG | - | chr2_3:65835442-65835461 | None:intergenic | 40.0% | |
| CACTGAAAACTCGTTAGAGA+TGG | - | chr2_3:65835566-65835585 | None:intergenic | 40.0% | |
| TTATATTGGAAAAGGGGACC+AGG | + | chr2_3:65835740-65835759 | Msa0306710:intron | 40.0% | |
| AAAAGAACGCCTGTTGAAAG+AGG | + | chr2_3:65836257-65836276 | Msa0306710:CDS | 40.0% | |
| !! | CAGGCTCTAAGATTGTAATC+TGG | + | chr2_3:65836824-65836843 | Msa0306710:intron | 40.0% |
| AACCTGAAGAAGAAACATGG+GGG | - | chr2_3:65837136-65837155 | None:intergenic | 40.0% | |
| GTGTACATCTTCACATGGTT+TGG | + | chr2_3:65837483-65837502 | Msa0306710:three_prime_UTR | 40.0% | |
| ! | TTTTTCCCCTTTGAGTGGGA+GGG | - | chr2_3:65833336-65833355 | None:intergenic | 45.0% |
| !!! | TTTTTTCCCCTTTGAGTGGG+AGG | - | chr2_3:65833337-65833356 | None:intergenic | 45.0% |
| GTGGAAGAAGAAGAAGACGA+AGG | - | chr2_3:65833429-65833448 | None:intergenic | 45.0% | |
| CTTAGTGAGGTCATTGCCTA+TGG | - | chr2_3:65833502-65833521 | None:intergenic | 45.0% | |
| CATAGGCAATGACCTCACTA+AGG | + | chr2_3:65833500-65833519 | Msa0306710:CDS | 45.0% | |
| GTTGAGATCACGGTCATTAG+TGG | - | chr2_3:65833538-65833557 | None:intergenic | 45.0% | |
| GAGAGAGGATGTTGAGATCA+CGG | - | chr2_3:65833548-65833567 | None:intergenic | 45.0% | |
| ! | AAGAAGAAACGGAGAGTGTG+TGG | - | chr2_3:65833581-65833600 | None:intergenic | 45.0% |
| AGAGTGGCTGGAAGAAGAAA+CGG | - | chr2_3:65833592-65833611 | None:intergenic | 45.0% | |
| GAGTGTGGAAGTTTGCAACA+TGG | + | chr2_3:65834133-65834152 | Msa0306710:intron | 45.0% | |
| ! | ACAACTTTTGTGCGCAAAGG+CGG | + | chr2_3:65834544-65834563 | Msa0306710:intron | 45.0% |
| AAGGCGGTCATGGCTAAATA+TGG | + | chr2_3:65834560-65834579 | Msa0306710:intron | 45.0% | |
| CGGTCATGGCTAAATATGGA+AGG | + | chr2_3:65834564-65834583 | Msa0306710:intron | 45.0% | |
| ATGAGAAAGGCAGTGAGAAG+TGG | + | chr2_3:65834684-65834703 | Msa0306710:intron | 45.0% | |
| !! | AGCCTCGTTGTTGTTTGCTA+TGG | - | chr2_3:65834784-65834803 | None:intergenic | 45.0% |
| AGCAAACAACAACGAGGCTA+AGG | + | chr2_3:65834785-65834804 | Msa0306710:intron | 45.0% | |
| AACAACGAGGCTAAGGTGAA+TGG | + | chr2_3:65834792-65834811 | Msa0306710:intron | 45.0% | |
| GGAAATGCAGCTGGAAAAAG+AGG | + | chr2_3:65834847-65834866 | Msa0306710:intron | 45.0% | |
| ATTGACGATGTTGAGTGAGC+AGG | + | chr2_3:65834894-65834913 | Msa0306710:intron | 45.0% | |
| TTGACGATGTTGAGTGAGCA+GGG | + | chr2_3:65834895-65834914 | Msa0306710:intron | 45.0% | |
| GCTGAGCACCATTGAGATAT+TGG | - | chr2_3:65835054-65835073 | None:intergenic | 45.0% | |
| CGACTCCCCAAACATACTAA+AGG | - | chr2_3:65835076-65835095 | None:intergenic | 45.0% | |
| AAACAGTTGTATCGTGGGTC+TGG | + | chr2_3:65835149-65835168 | Msa0306710:intron | 45.0% | |
| GGTGGCAGAAAGTAGATCAT+AGG | + | chr2_3:65835212-65835231 | Msa0306710:intron | 45.0% | |
| AGTAGATCATAGGAAGTGGG+TGG | + | chr2_3:65835222-65835241 | Msa0306710:intron | 45.0% | |
| GACGTATAGAATGGGAATGG+AGG | - | chr2_3:65835538-65835557 | None:intergenic | 45.0% | |
| CAGGACGTATAGAATGGGAA+TGG | - | chr2_3:65835541-65835560 | None:intergenic | 45.0% | |
| TGGAGCAGGACGTATAGAAT+GGG | - | chr2_3:65835546-65835565 | None:intergenic | 45.0% | |
| ATGGAGCAGGACGTATAGAA+TGG | - | chr2_3:65835547-65835566 | None:intergenic | 45.0% | |
| AAACTCGTTAGAGATGGAGC+AGG | - | chr2_3:65835560-65835579 | None:intergenic | 45.0% | |
| CTATGTGGAATACCGGATAG+CGG | - | chr2_3:65835968-65835987 | None:intergenic | 45.0% | |
| AGCAAGAAAAGCAGAGGACA+AGG | + | chr2_3:65836463-65836482 | Msa0306710:intron | 45.0% | |
| GAAACATGGGGGAAAGAGAA+TGG | - | chr2_3:65837125-65837144 | None:intergenic | 45.0% | |
| TTCCCCCATGTTTCTTCTTC+AGG | + | chr2_3:65837131-65837150 | Msa0306710:intron | 45.0% | |
| CACGTCAAACATGTCTCTGT+TGG | + | chr2_3:65837333-65837352 | Msa0306710:three_prime_UTR | 45.0% | |
| CTGGTGTGTACATCTTCACA+TGG | + | chr2_3:65837478-65837497 | Msa0306710:three_prime_UTR | 45.0% | |
| AGTGTTTCCCTCCCACTCAA+AGG | + | chr2_3:65833326-65833345 | Msa0306710:five_prime_UTR | 50.0% | |
| GTGTTTCCCTCCCACTCAAA+GGG | + | chr2_3:65833327-65833346 | Msa0306710:five_prime_UTR | 50.0% | |
| TGTTTCCCTCCCACTCAAAG+GGG | + | chr2_3:65833328-65833347 | Msa0306710:five_prime_UTR | 50.0% | |
| ! | TGTGGTGGAGACATTGAGAG+AGG | - | chr2_3:65833563-65833582 | None:intergenic | 50.0% |
| ! | AAGAAACGGAGAGTGTGTGG+TGG | - | chr2_3:65833578-65833597 | None:intergenic | 50.0% |
| GAACCTCATTGAGGTCAGAG+TGG | - | chr2_3:65833608-65833627 | None:intergenic | 50.0% | |
| ACGAGGAGAGAACCTCATTG+AGG | - | chr2_3:65833617-65833636 | None:intergenic | 50.0% | |
| GTGCGTGTCTGGTATGACAA+TGG | + | chr2_3:65834296-65834315 | Msa0306710:intron | 50.0% | |
| TGAGAGAGATATGGGGAGAG+TGG | + | chr2_3:65834446-65834465 | Msa0306710:intron | 50.0% | |
| GAGAGAGATATGGGGAGAGT+GGG | + | chr2_3:65834447-65834466 | Msa0306710:intron | 50.0% | |
| ! | AGATATGGGGAGAGTGGGTT+GGG | + | chr2_3:65834452-65834471 | Msa0306710:intron | 50.0% |
| ATGGGTGTGGTGACTCAAAG+TGG | + | chr2_3:65834517-65834536 | Msa0306710:intron | 50.0% | |
| TTTGATGTCTCGCCACCAAC+TGG | - | chr2_3:65834621-65834640 | None:intergenic | 50.0% | |
| TGACGATGTTGAGTGAGCAG+GGG | + | chr2_3:65834896-65834915 | Msa0306710:intron | 50.0% | |
| TTGAGTGAGCAGGGGATCAA+TGG | + | chr2_3:65834904-65834923 | Msa0306710:intron | 50.0% | |
| TATCGTGGGTCTGGAGGAAT+GGG | + | chr2_3:65835158-65835177 | Msa0306710:intron | 50.0% | |
| GGAAGTGGGTGGCATTTAAG+TGG | + | chr2_3:65835233-65835252 | Msa0306710:intron | 50.0% | |
| GATATGTGGCTTCCGCTATC+CGG | + | chr2_3:65835953-65835972 | Msa0306710:intron | 50.0% | |
| ! | ATCTGAGACTGCTGCTGATG+CGG | + | chr2_3:65836194-65836213 | Msa0306710:CDS | 50.0% |
| ! | GGAGCTTTTGCAGAGAGAAC+TGG | + | chr2_3:65836221-65836240 | Msa0306710:CDS | 50.0% |
| CTCATTGAGGTCAGAGTGGC+TGG | - | chr2_3:65833604-65833623 | None:intergenic | 55.0% | |
| CAGCCACTCTGACCTCAATG+AGG | + | chr2_3:65833602-65833621 | Msa0306710:CDS | 55.0% | |
| GAGGTTCTCTCCTCGTTCCA+AGG | + | chr2_3:65833621-65833640 | Msa0306710:CDS | 55.0% | |
| GGAAGTAGGTTGTGCGTGTC+TGG | + | chr2_3:65834285-65834304 | Msa0306710:intron | 55.0% | |
| GAGATATGGGGAGAGTGGGT+TGG | + | chr2_3:65834451-65834470 | Msa0306710:intron | 55.0% | |
| TTTGTGCGCAAAGGCGGTCA+TGG | + | chr2_3:65834550-65834569 | Msa0306710:intron | 55.0% | |
| AAGGCAAGATGGAGTGCGTG+TGG | + | chr2_3:65834583-65834602 | Msa0306710:intron | 55.0% | |
| CAAGATGGAGTGCGTGTGGT+TGG | + | chr2_3:65834587-65834606 | Msa0306710:intron | 55.0% | |
| GTGGCGAGACATCAAAGCGA+TGG | + | chr2_3:65834625-65834644 | Msa0306710:intron | 55.0% | |
| CACGGGAATGGAAATGCAGC+TGG | + | chr2_3:65834838-65834857 | Msa0306710:intron | 55.0% | |
| GCAGGGGATCAATGGAGATG+TGG | + | chr2_3:65834912-65834931 | Msa0306710:intron | 55.0% | |
| CAGTTGTATCGTGGGTCTGG+AGG | + | chr2_3:65835152-65835171 | Msa0306710:intron | 55.0% | |
| GTATCGTGGGTCTGGAGGAA+TGG | + | chr2_3:65835157-65835176 | Msa0306710:intron | 55.0% | |
| ! | TGGAGGTGGTGGTGCACAAC+AGG | + | chr2_3:65835285-65835304 | Msa0306710:intron | 60.0% |
| AGGCAGAGCTCAACAGCTGG+GGG | - | chr2_3:65835518-65835537 | None:intergenic | 60.0% | |
| GAGGCAGAGCTCAACAGCTG+GGG | - | chr2_3:65835519-65835538 | None:intergenic | 60.0% | |
| GGAGGCAGAGCTCAACAGCT+GGG | - | chr2_3:65835520-65835539 | None:intergenic | 60.0% | |
| TGGAGGCAGAGCTCAACAGC+TGG | - | chr2_3:65835521-65835540 | None:intergenic | 60.0% | |
| GACTGCTGCTGATGCGGATC+TGG | + | chr2_3:65836200-65836219 | Msa0306710:CDS | 60.0% | |
| GCACAACAGGACGCAGACCG+TGG | + | chr2_3:65835298-65835317 | Msa0306710:intron | 65.0% | |
| GGCAGAGCTCAACAGCTGGG+GGG | - | chr2_3:65835517-65835536 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 65833314 | 65837551 | 65833314 | ID=Msa0306710;Name=Msa0306710 |
| chr2_3 | mRNA | 65833314 | 65837551 | 65833314 | ID=Msa0306710-mRNA-1;Parent=Msa0306710;Name=Msa0306710-mRNA-1;_AED=0.10;_eAED=0.10;_QI=139|0.33|0.75|1|1|1|4|221|171 |
| chr2_3 | exon | 65833314 | 65833642 | 65833314 | ID=Msa0306710-mRNA-1:exon:21884;Parent=Msa0306710-mRNA-1 |
| chr2_3 | exon | 65836136 | 65836280 | 65836136 | ID=Msa0306710-mRNA-1:exon:21885;Parent=Msa0306710-mRNA-1 |
| chr2_3 | exon | 65837028 | 65837101 | 65837028 | ID=Msa0306710-mRNA-1:exon:21886;Parent=Msa0306710-mRNA-1 |
| chr2_3 | exon | 65837224 | 65837551 | 65837224 | ID=Msa0306710-mRNA-1:exon:21887;Parent=Msa0306710-mRNA-1 |
| chr2_3 | five_prime_UTR | 65833314 | 65833452 | 65833314 | ID=Msa0306710-mRNA-1:five_prime_utr;Parent=Msa0306710-mRNA-1 |
| chr2_3 | CDS | 65833453 | 65833642 | 65833453 | ID=Msa0306710-mRNA-1:cds;Parent=Msa0306710-mRNA-1 |
| chr2_3 | CDS | 65836136 | 65836280 | 65836136 | ID=Msa0306710-mRNA-1:cds;Parent=Msa0306710-mRNA-1 |
| chr2_3 | CDS | 65837028 | 65837101 | 65837028 | ID=Msa0306710-mRNA-1:cds;Parent=Msa0306710-mRNA-1 |
| chr2_3 | CDS | 65837224 | 65837330 | 65837224 | ID=Msa0306710-mRNA-1:cds;Parent=Msa0306710-mRNA-1 |
| chr2_3 | three_prime_UTR | 65837331 | 65837551 | 65837331 | ID=Msa0306710-mRNA-1:three_prime_utr;Parent=Msa0306710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
