AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1217470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1217470 MtrunA17_Chr4g0067011 95.171 497 4 1 2 478 248 744 0.0 959
Msa1217470 MtrunA17_Chr2g0296381 88.732 497 36 1 2 478 246 742 0.0 895
Msa1217470 MtrunA17_Chr7g0268881 80.977 389 54 1 110 478 1 389 0.0 664
Msa1217470 MtrunA17_Chr8g0361901 35.542 498 274 9 8 478 254 731 3.97e-87 282
Msa1217470 MtrunA17_Chr1g0166181 36.747 498 270 8 8 478 260 739 3.71e-86 280
Msa1217470 MtrunA17_Chr2g0285881 35.081 496 271 8 12 478 319 792 3.38e-85 278
Msa1217470 MtrunA17_Chr5g0416711 36.454 502 264 10 8 478 255 732 9.54e-85 276
Msa1217470 MtrunA17_Chr6g0453061 34.731 501 275 10 8 478 252 730 7.41e-82 268
Msa1217470 MtrunA17_Chr1g0166141 35.743 498 275 8 8 478 195 674 1.01e-81 266
Msa1217470 MtrunA17_Chr7g0231701 35.341 498 260 10 8 478 246 708 1.31e-80 264
Msa1217470 MtrunA17_Chr1g0166131 35.341 498 277 8 8 478 261 740 5.80e-80 263
Msa1217470 MtrunA17_Chr7g0231741 38.743 382 198 8 125 478 2 375 4.30e-71 230
Msa1217470 MtrunA17_Chr6g0453081 32.869 502 283 9 8 478 252 730 1.02e-70 238
Msa1217470 MtrunA17_Chr5g0416691 34.398 407 235 10 97 478 2 401 5.11e-58 196
Msa1217470 MtrunA17_Chr7g0231791 35.049 408 231 10 97 478 2 401 2.79e-56 192
Msa1217470 MtrunA17_Chr5g0416831 34.304 309 156 7 177 478 21 289 1.07e-43 155
Msa1217470 MtrunA17_Chr7g0268891 69.620 79 24 0 7 85 250 328 2.91e-30 120
Msa1217470 MtrunA17_Chr2g0285291 48.529 68 26 1 334 392 1 68 1.11e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1217470 AT4G02570.4 77.264 497 90 2 2 478 245 738 0.0 806
Msa1217470 AT4G02570.2 77.264 497 90 2 2 478 245 738 0.0 806
Msa1217470 AT4G02570.1 77.264 497 90 2 2 478 245 738 0.0 806
Msa1217470 AT4G02570.3 77.264 497 90 2 2 478 245 738 0.0 806
Msa1217470 AT1G02980.1 66.667 498 144 3 2 478 246 742 0.0 690
Msa1217470 AT1G02980.2 66.667 498 144 3 2 478 246 742 0.0 690
Msa1217470 AT1G43140.1 64.257 498 127 4 2 478 254 721 0.0 632
Msa1217470 AT1G26830.1 36.747 498 268 9 8 478 255 732 4.43e-89 287
Msa1217470 AT1G69670.1 35.614 497 275 9 8 478 255 732 1.80e-88 286
Msa1217470 AT1G69670.2 35.614 497 275 9 8 478 255 732 1.80e-88 286
Msa1217470 AT5G46210.1 35.628 494 271 9 8 478 323 792 8.48e-83 272
Msa1217470 AT1G59790.2 48.175 137 54 1 2 138 251 370 4.08e-33 129
Msa1217470 AT1G59790.1 47.200 125 49 1 2 126 251 358 4.13e-28 115

Find 101 sgRNAs with CRISPR-Local

Find 510 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGTTCTGACCACTGGTTTC+TGG 0.096559 8_1:-79805623 Msa1217470:CDS
GCTAAGTACTTGAACATATT+TGG 0.130944 8_1:+79804478 None:intergenic
AATGACTCAGTTAAACTTAT+TGG 0.163771 8_1:-79805106 Msa1217470:CDS
CATGTAGCTCAATCACTTTC+CGG 0.271035 8_1:+79807546 None:intergenic
TATGAAGAGTCGGAAAGTTT+TGG 0.279840 8_1:-79804731 Msa1217470:CDS
AAACTTCCCACTTATGTTAC+AGG 0.307020 8_1:+79805360 None:intergenic
TGTGGAAAAGAGTGTGATTC+TGG 0.331752 8_1:+79807492 None:intergenic
GCAGTTGGGTCGCATGTTTA+AGG 0.348970 8_1:-79804677 Msa1217470:intron
GACCATTCCTTCCATCTTTG+AGG 0.353692 8_1:+79805848 None:intergenic
TTTAATGCCTCTTTGTTTGT+TGG 0.368849 8_1:-79812579 None:intergenic
GTAACTGTTAAGTCTATTCC+AGG 0.375194 8_1:+79805645 None:intergenic
TTTGATTTCTCGGGATTACT+TGG 0.380388 8_1:-79804518 Msa1217470:CDS
TCTATTCCAGGGTCGGCATT+AGG 0.385321 8_1:+79805657 None:intergenic
ACTTACATGGATTTACTCCT+TGG 0.389503 8_1:-79805386 Msa1217470:CDS
AGTACTGTTATTTGTAGCTT+CGG 0.399723 8_1:-79804154 Msa1217470:three_prime_UTR
TGCTTTACTTAGAGATGATA+AGG 0.405401 8_1:-79808426 Msa1217470:intron
AAGACTTGTCAAGGATGTTC+AGG 0.408359 8_1:-79808309 Msa1217470:CDS
TGTGATAACATTCTTAAGAA+AGG 0.408911 8_1:-79807310 Msa1217470:CDS
TTCTAAAATACCCCGTGGCT+TGG 0.411928 8_1:-79808281 Msa1217470:CDS
ATTGAGTTGTTCCAGCTCAT+TGG 0.413327 8_1:-79804276 Msa1217470:three_prime_UTR
TCTCAATCTTCCTGCAGAAA+TGG 0.424664 8_1:-79805580 Msa1217470:intron
TATTGGATGAAGATGTCATT+AGG 0.425424 8_1:-79805089 Msa1217470:CDS
AGATGCAGCTAGTAACAAAA+AGG 0.437346 8_1:-79808058 Msa1217470:intron
GGGCTATCAACAGTTAGTTA+TGG 0.441591 8_1:-79804710 Msa1217470:CDS
AAGAGTGTGATTCTGGAAAC+AGG 0.442171 8_1:+79807499 None:intergenic
AGATCAAAAGATTTATAACT+AGG 0.445948 8_1:+79805600 None:intergenic
TGCTTAAATATACTAGAAAC+AGG 0.455563 8_1:+79808256 None:intergenic
TTCTCATCCACAGGAGGTAG+AGG 0.465842 8_1:+79804820 None:intergenic
TATGGAGTGCGTTGAGCAGT+TGG 0.466660 8_1:-79804692 Msa1217470:CDS
GATTGAAGATTTGATTTCTC+GGG 0.468239 8_1:-79804527 Msa1217470:CDS
ATGTCTACAGGCAGAGAAAA+GGG 0.468308 8_1:-79807675 Msa1217470:intron
CTTACATGGATTTACTCCTT+GGG 0.469426 8_1:-79805385 Msa1217470:CDS
CTTAGAAATCACCAGGTGAA+TGG 0.475673 8_1:-79804108 Msa1217470:three_prime_UTR
ATTAAATTCAAAATAATCAG+TGG 0.477551 8_1:+79804996 None:intergenic
ATCCAGATTACCATTTCTGC+AGG 0.478678 8_1:+79805570 None:intergenic
TGTTTCTAGTATATTTAAGC+AGG 0.479126 8_1:-79808254 Msa1217470:intron
AATGTCTACAGGCAGAGAAA+AGG 0.480638 8_1:-79807676 Msa1217470:intron
GCGCACAATTGAGGCATCAA+TGG 0.485374 8_1:+79804756 None:intergenic
AAAGTATAAGATTCTTATCA+AGG 0.493353 8_1:-79805043 Msa1217470:CDS
GGATTGAAGATTTGATTTCT+CGG 0.500636 8_1:-79804528 Msa1217470:CDS
GGAGAATCAAACTAGCTTTG+AGG 0.511793 8_1:-79805697 Msa1217470:CDS
AATTGAAGAAACCCTTGAAA+AGG 0.512491 8_1:-79807260 Msa1217470:intron
TGTGGATGTGTGCTCAAGTT+GGG 0.512560 8_1:-79804314 Msa1217470:three_prime_UTR
ACAGTTACAGTTCTGACCAC+TGG 0.512956 8_1:-79805630 Msa1217470:CDS
TATCAGCATGTTACCACTGA+AGG 0.513329 8_1:-79808105 Msa1217470:intron
CTTCATAATGCGCACAATTG+AGG 0.520124 8_1:+79804747 None:intergenic
TATTGTTGGTACGCAGGAGC+AGG 0.520932 8_1:-79807651 Msa1217470:intron
ATGGAGTGCGTTGAGCAGTT+GGG 0.521583 8_1:-79804691 Msa1217470:CDS
GCAGAGAAAAGGGATATTGT+TGG 0.521890 8_1:-79807665 Msa1217470:CDS
TCAGGAAGAAGCTTGCTCGC+AGG 0.522136 8_1:-79805953 Msa1217470:intron
GATCATATAGGCTCTTAAAG+AGG 0.526409 8_1:-79807398 Msa1217470:intron
CAAAGTTCACTGACAAAATG+AGG 0.526696 8_1:-79804972 Msa1217470:CDS
CAAAGCACAGAAAACTTACA+TGG 0.526940 8_1:-79805399 Msa1217470:CDS
CTCCTCTTTCGAGAAAACTA+AGG 0.529162 8_1:+79804357 None:intergenic
TTGGGTACCTGTAACATAAG+TGG 0.530949 8_1:-79805367 Msa1217470:CDS
TACAGATTTGACGCTGGCAA+AGG 0.535172 8_1:-79805718 Msa1217470:CDS
AATGAGCTGGAACAACTCAA+TGG 0.540938 8_1:+79804278 None:intergenic
GCTTGTTGTCACAACCTACC+AGG 0.542445 8_1:-79805320 Msa1217470:intron
ATCCCGAGTGCTCTTTCTCA+AGG 0.548621 8_1:+79808453 None:intergenic
TGGTGAGGGTACCAATGAGC+TGG 0.553493 8_1:+79804265 None:intergenic
TACCTCAAAGATGGAAGGAA+TGG 0.555295 8_1:-79805850 Msa1217470:intron
GCTCCTTGAGAAAGAGCACT+CGG 0.563609 8_1:-79808456 Msa1217470:CDS
GCATGTTACCACTGAAGGCA+TGG 0.566747 8_1:-79808100 Msa1217470:CDS
GTAGATTCCTCTACCTCCTG+TGG 0.567732 8_1:-79804827 Msa1217470:intron
TGACAAAATGAGGAGGATCA+AGG 0.568312 8_1:-79804962 Msa1217470:intron
TGGACAGTTTACCTCAAAGA+TGG 0.570096 8_1:-79805859 Msa1217470:CDS
TTGTGGATGTGTGCTCAAGT+TGG 0.572064 8_1:-79804315 Msa1217470:three_prime_UTR
AATACTCCTAATGCCGACCC+TGG 0.575317 8_1:-79805663 Msa1217470:CDS
ACTTTGCACATGACAAAGAG+TGG 0.575661 8_1:+79805061 None:intergenic
GCAAATGTAGATTACTGTTG+TGG 0.579359 8_1:-79804332 Msa1217470:three_prime_UTR
AACAGGAGTTCACATATGCC+AGG 0.580301 8_1:+79807516 None:intergenic
AAGGGATATTGTTGGTACGC+AGG 0.588845 8_1:-79807657 Msa1217470:CDS
TTATCAGCTTAGAAATCACC+AGG 0.592043 8_1:-79804115 Msa1217470:three_prime_UTR
TGGGTACCTGTAACATAAGT+GGG 0.595127 8_1:-79805366 Msa1217470:CDS
GCAGCAAATAAGCTATGAGA+TGG 0.597059 8_1:+79804215 None:intergenic
CTCCTTGAGAAAGAGCACTC+GGG 0.598786 8_1:-79808455 Msa1217470:CDS
TTAAATTCAAAATAATCAGT+GGG 0.599039 8_1:+79804997 None:intergenic
AGAAACAGGATCCAAGCCAC+GGG 0.607688 8_1:+79808270 None:intergenic
ACTCTCACCAACAAACAAAG+AGG 0.611577 8_1:+79812572 None:intergenic
CACCAACGCCATGCCTTCAG+TGG 0.612973 8_1:+79808092 None:intergenic
GGTAAGTGATATAACCTGGT+AGG 0.620880 8_1:+79805306 None:intergenic
TGTTAAGTCTATTCCAGGGT+CGG 0.621237 8_1:+79805650 None:intergenic
CAGTTTACCTCAAAGATGGA+AGG 0.621254 8_1:-79805855 Msa1217470:CDS
TAGAAACAGGATCCAAGCCA+CGG 0.624942 8_1:+79808269 None:intergenic
GATAACATTCTTAAGAAAGG+AGG 0.627547 8_1:-79807307 Msa1217470:CDS
TTCAGTGTGAAGACTTGTCA+AGG 0.628529 8_1:-79808318 Msa1217470:intron
TTGTGCGCATTATGAAGAGT+CGG 0.630462 8_1:-79804741 Msa1217470:CDS
AGAATAACTCAGTCTATCAG+AGG 0.636581 8_1:+79805134 None:intergenic
ACTTATGTTACAGGTACCCA+AGG 0.636697 8_1:+79805369 None:intergenic
AAATTGAAGCAACAGTGTGG+TGG 0.641731 8_1:-79805879 Msa1217470:CDS
TGAGCTACATGACAAGTACC+TGG 0.651511 8_1:-79807534 Msa1217470:CDS
AGAAGACATATCCATTCACC+TGG 0.652473 8_1:+79804097 None:intergenic
TACCACTGAAGGCATGGCGT+TGG 0.656008 8_1:-79808094 Msa1217470:CDS
AGTTCACTGACAAAATGAGG+AGG 0.668852 8_1:-79804969 Msa1217470:CDS
GTTGCAACTAGCAAAACAAG+AGG 0.677844 8_1:-79804419 Msa1217470:three_prime_UTR
CCAGGTTACAGATTTGACGC+TGG 0.681048 8_1:-79805724 Msa1217470:intron
TAACTGTTAAGTCTATTCCA+GGG 0.696441 8_1:+79805646 None:intergenic
ACAAAATTGAAGCAACAGTG+TGG 0.705779 8_1:-79805882 Msa1217470:CDS
ATAACTAGGCCAGAAACCAG+TGG 0.715997 8_1:+79805614 None:intergenic
ATATGATTGAGCAAATGAAG+TGG 0.720199 8_1:-79804444 Msa1217470:three_prime_UTR
GAAACAGGATCCAAGCCACG+GGG 0.759466 8_1:+79808271 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTGATTGTATTTTTTTAT+AGG - chr8_1:79804376-79804395 Msa1217470:three_prime_UTR 10.0%
!!! TTATATTTTTAAAACATTTG+AGG - chr8_1:79804568-79804587 Msa1217470:intron 10.0%
!! NNNNNNNNNTTACATCTATT+TGG - chr8_1:79807930-79807949 Msa1217470:intron 10.0%
!!! ATTTTTTACAAAACAAATAA+AGG - chr8_1:79808694-79808713 Msa1217470:intron 10.0%
!!! ATATAAATTTTAAGATTCAA+GGG + chr8_1:79812003-79812022 None:intergenic 10.0%
!! TGATAATTCTACTAATTAAA+AGG + chr8_1:79804102-79804121 None:intergenic 15.0%
!!! TCAATTCTATCTTAAATTTT+TGG + chr8_1:79804362-79804381 None:intergenic 15.0%
!!! TATAATAATTTTGGATTTGA+AGG + chr8_1:79804601-79804620 None:intergenic 15.0%
!! AAATATATAATATTTGGAGA+AGG - chr8_1:79805278-79805297 Msa1217470:intron 15.0%
!!! AAAGAAATTTTACAAAAATG+TGG - chr8_1:79807036-79807055 Msa1217470:intron 15.0%
!!! AAGAAATTTTACAAAAATGT+GGG - chr8_1:79807037-79807056 Msa1217470:intron 15.0%
!!! AAACATCTTTTTAAATAAGA+AGG + chr8_1:79807216-79807235 None:intergenic 15.0%
!!! TTTTAATAAATGATAGATGA+AGG + chr8_1:79807536-79807555 None:intergenic 15.0%
!!! TTTATTAAAAATGATTTGCT+TGG - chr8_1:79807546-79807565 Msa1217470:CDS 15.0%
!!! TATTATGACTTTTCTTTTTT+TGG - chr8_1:79808007-79808026 Msa1217470:intron 15.0%
!! AATATATTTGCATTATCAAA+GGG + chr8_1:79808399-79808418 None:intergenic 15.0%
!! AAATATATTTGCATTATCAA+AGG + chr8_1:79808400-79808419 None:intergenic 15.0%
!! GTAGACATTATAATATAAAA+GGG + chr8_1:79808906-79808925 None:intergenic 15.0%
!! TGTAGACATTATAATATAAA+AGG + chr8_1:79808907-79808926 None:intergenic 15.0%
!!! TTTTATATTATAATGTCTAC+AGG - chr8_1:79808906-79808925 Msa1217470:intron 15.0%
!!! GAAATTTTCTTTTATTTGTT+TGG + chr8_1:79809659-79809678 None:intergenic 15.0%
!! CAAATAAAAGAAAATTTCAT+TGG - chr8_1:79809661-79809680 Msa1217470:intron 15.0%
!!! TATTAATGTCTCTAAAATTA+GGG + chr8_1:79809827-79809846 None:intergenic 15.0%
!!! ATATTAATGTCTCTAAAATT+AGG + chr8_1:79809828-79809847 None:intergenic 15.0%
!!! TTTTATATCTCTTAAAATGA+TGG + chr8_1:79810017-79810036 None:intergenic 15.0%
!!! TATATTGTTATTTAGAGAAT+GGG + chr8_1:79810364-79810383 None:intergenic 15.0%
!! TAAACTTCAGAAAATATTTA+CGG + chr8_1:79810390-79810409 None:intergenic 15.0%
!! GGTAAATATTACATAATAAA+TGG + chr8_1:79810504-79810523 None:intergenic 15.0%
!!! GCTAATTAAACAATTTTATT+TGG - chr8_1:79810532-79810551 Msa1217470:intron 15.0%
!!! TTTAAAGTATTTGTATATGA+TGG - chr8_1:79810773-79810792 Msa1217470:intron 15.0%
!! TTAAATTCAAAATAATCAGT+GGG + chr8_1:79811599-79811618 None:intergenic 15.0%
!! ATTAAATTCAAAATAATCAG+TGG + chr8_1:79811600-79811619 None:intergenic 15.0%
!!! ATATTTTCTCTTTATTTACT+TGG - chr8_1:79811681-79811700 Msa1217470:intron 15.0%
!!! CATATAAATTTTAAGATTCA+AGG + chr8_1:79812004-79812023 None:intergenic 15.0%
!! CTTGAATCTTAAAATTTATA+TGG - chr8_1:79812002-79812021 Msa1217470:intron 15.0%
!!! AATAACAGTACTTTTTTTTT+GGG + chr8_1:79812431-79812450 None:intergenic 15.0%
!!! AAATAACAGTACTTTTTTTT+TGG + chr8_1:79812432-79812451 None:intergenic 15.0%
!! AAAACTGAAAAAATAGTTAG+AGG + chr8_1:79804165-79804184 None:intergenic 20.0%
!!! AATTGGAGTACTATTATTTA+TGG + chr8_1:79804232-79804251 None:intergenic 20.0%
!! AGGAAATTATATGATTCAAT+TGG + chr8_1:79804249-79804268 None:intergenic 20.0%
!! ATTGAATCATATAATTTCCT+TGG - chr8_1:79804249-79804268 Msa1217470:three_prime_UTR 20.0%
!! AAAATTTCCAATTTATGAAG+CGG + chr8_1:79804330-79804349 None:intergenic 20.0%
!!! TAAGCTCTCTATAATAATTT+TGG + chr8_1:79804610-79804629 None:intergenic 20.0%
!! AAAGAAAAAGATTAATGTGA+AGG - chr8_1:79804729-79804748 Msa1217470:CDS 20.0%
!! GAAAATAAAGAGAAAAAAGT+TGG - chr8_1:79804751-79804770 Msa1217470:CDS 20.0%
!!! TAGTGTTGTTCATATTTTAA+CGG + chr8_1:79805115-79805134 None:intergenic 20.0%
!! ATTATTATTAGGGCAATTAA+AGG + chr8_1:79805343-79805362 None:intergenic 20.0%
!! GTACAAACAGATTATTATTA+GGG + chr8_1:79805353-79805372 None:intergenic 20.0%
!! AGTACAAACAGATTATTATT+AGG + chr8_1:79805354-79805373 None:intergenic 20.0%
!! AAAAGTTACTTAATGATTGA+GGG + chr8_1:79805532-79805551 None:intergenic 20.0%
!! TAAAAGTTACTTAATGATTG+AGG + chr8_1:79805533-79805552 None:intergenic 20.0%
!! TTGAAGAATTTAATACAAGA+TGG - chr8_1:79806837-79806856 Msa1217470:intron 20.0%
!!! AGAAATTTTACAAAAATGTG+GGG - chr8_1:79807038-79807057 Msa1217470:intron 20.0%
!!! TTGATCATAACTTAATTTGA+TGG + chr8_1:79807190-79807209 None:intergenic 20.0%
!!! TTTTCTAATTTTGATGTTAG+TGG - chr8_1:79807273-79807292 Msa1217470:CDS 20.0%
!!! TTTCTAATTTTGATGTTAGT+GGG - chr8_1:79807274-79807293 Msa1217470:CDS 20.0%
!!! TTTTACAAAACAAATAAAGG+AGG - chr8_1:79808697-79808716 Msa1217470:intron 20.0%
!! ATATAAAAGGGTGAAAATAA+GGG + chr8_1:79808894-79808913 None:intergenic 20.0%
!! AATATAAAAGGGTGAAAATA+AGG + chr8_1:79808895-79808914 None:intergenic 20.0%
!!! GATTTAATTGCAATTTTTAC+AGG - chr8_1:79808989-79809008 Msa1217470:intron 20.0%
!!! AAGTAAAAGTATATATGTTG+CGG + chr8_1:79809360-79809379 None:intergenic 20.0%
!!! CTTCTACTTTTTTTATAAAC+TGG - chr8_1:79809426-79809445 Msa1217470:intron 20.0%
!!! TCTTTTATTTGTTTGGAAAT+TGG + chr8_1:79809652-79809671 None:intergenic 20.0%
!! AAGTAAGTATGAAAAAAATG+AGG + chr8_1:79809695-79809714 None:intergenic 20.0%
!! TATTTAATACAACTAGAAAG+TGG - chr8_1:79810099-79810118 Msa1217470:intron 20.0%
!! ATTTAATACAACTAGAAAGT+GGG - chr8_1:79810100-79810119 Msa1217470:intron 20.0%
!! AAATGAAATAGATAGTGTTA+AGG - chr8_1:79810172-79810191 Msa1217470:intron 20.0%
!! AATGAAATAGATAGTGTTAA+GGG - chr8_1:79810173-79810192 Msa1217470:intron 20.0%
!! TAAAAGTCTAGATTCATATA+AGG + chr8_1:79810252-79810271 None:intergenic 20.0%
!!! ATATTGTTATTTAGAGAATG+GGG + chr8_1:79810363-79810382 None:intergenic 20.0%
!!! CTATATTGTTATTTAGAGAA+TGG + chr8_1:79810365-79810384 None:intergenic 20.0%
!! AAAGAAACAACATTTACAAT+TGG - chr8_1:79810447-79810466 Msa1217470:intron 20.0%
!! ATTAATACAAGATTCTTGTT+TGG - chr8_1:79810611-79810630 Msa1217470:intron 20.0%
!!! ATGCTGTATTTTTTTTTTGT+TGG - chr8_1:79810808-79810827 Msa1217470:intron 20.0%
!!! TGTATTTTTTTTTTGTTGGT+TGG - chr8_1:79810812-79810831 Msa1217470:intron 20.0%
!! AGATCAAAAGATTTATAACT+AGG + chr8_1:79810996-79811015 None:intergenic 20.0%
!!! TGGATATTAAACCTATATTT+TGG - chr8_1:79811084-79811103 Msa1217470:intron 20.0%
!! TTAATTATCGACCAAAATAT+AGG + chr8_1:79811098-79811117 None:intergenic 20.0%
!! TTGAAAAATAAGACAACATT+GGG + chr8_1:79811411-79811430 None:intergenic 20.0%
!! AAAGTATAAGATTCTTATCA+AGG - chr8_1:79811550-79811569 Msa1217470:intron 20.0%
!!! ATAACAGTACTTTTTTTTTG+GGG + chr8_1:79812430-79812449 None:intergenic 20.0%
!! AAAAAAGCGTATTCTAGATT+AGG + chr8_1:79804432-79804451 None:intergenic 25.0%
!!! CTATAAAGTTTTGCTTTTCT+TGG + chr8_1:79804494-79804513 None:intergenic 25.0%
!!! AGTGTTGTTCATATTTTAAC+GGG + chr8_1:79805114-79805133 None:intergenic 25.0%
! TTGGAGAAGGTTTAATATAT+TGG - chr8_1:79805291-79805310 Msa1217470:intron 25.0%
! TTAAGCATGGAATAATTTCA+TGG + chr8_1:79805663-79805682 None:intergenic 25.0%
!! GAAATTTTACAAAAATGTGG+GGG - chr8_1:79807039-79807058 Msa1217470:intron 25.0%
!! AAATTTTACAAAAATGTGGG+GGG - chr8_1:79807040-79807059 Msa1217470:intron 25.0%
!!! TAAAATTTGATAGCGAAGAT+TGG - chr8_1:79807103-79807122 Msa1217470:intron 25.0%
!! AAAATGTCATCTTCTTTTTG+TGG + chr8_1:79807162-79807181 None:intergenic 25.0%
! TGCTTAAATATACTAGAAAC+AGG + chr8_1:79808340-79808359 None:intergenic 25.0%
!!! TGTTTCTAGTATATTTAAGC+AGG - chr8_1:79808339-79808358 Msa1217470:intron 25.0%
!! TCTACAATTTTACTTATTCC+AGG - chr8_1:79808578-79808597 Msa1217470:intron 25.0%
! AATGCATAAAATTGTCAAGA+AGG + chr8_1:79808810-79808829 None:intergenic 25.0%
! TCTGAAAGATTTGATCATAT+AGG - chr8_1:79809183-79809202 Msa1217470:intron 25.0%
! AAGAATGTTATCACAAAAAG+TGG + chr8_1:79809278-79809297 None:intergenic 25.0%
! TGTGATAACATTCTTAAGAA+AGG - chr8_1:79809283-79809302 Msa1217470:intron 25.0%
! TTCTTTGAATTTGATACATG+CGG - chr8_1:79809378-79809397 Msa1217470:intron 25.0%
!! AAGTAGAAGTATAAATGTTG+TGG + chr8_1:79809415-79809434 None:intergenic 25.0%
!! TTTTATAAACTGGACATACA+TGG - chr8_1:79809436-79809455 Msa1217470:intron 25.0%
!!! TTTATTTTACCTGTAGAACT+CGG + chr8_1:79809540-79809559 None:intergenic 25.0%
!! TTAAATTTTGTCTCATGCAA+GGG - chr8_1:79809790-79809809 Msa1217470:intron 25.0%
!! TTGTTTCGTGACATTATTTT+AGG - chr8_1:79809890-79809909 Msa1217470:intron 25.0%
!!! TGTTTCGTGACATTATTTTA+GGG - chr8_1:79809891-79809910 Msa1217470:intron 25.0%
!! ACTTTTATCAGTATATCTGA+TGG - chr8_1:79810265-79810284 Msa1217470:intron 25.0%
!! AAGTATTGTTATGGAAATCT+TGG - chr8_1:79810303-79810322 Msa1217470:intron 25.0%
! AGTATTGTTATGGAAATCTT+GGG - chr8_1:79810304-79810323 Msa1217470:intron 25.0%
! ATGTAATATTTACCTGAAAG+CGG - chr8_1:79810510-79810529 Msa1217470:intron 25.0%
! AACATCTTACATGAACAAAA+GGG + chr8_1:79810580-79810599 None:intergenic 25.0%
! AAACATCTTACATGAACAAA+AGG + chr8_1:79810581-79810600 None:intergenic 25.0%
! AAATACAGCATCTAGTATAT+TGG + chr8_1:79810799-79810818 None:intergenic 25.0%
!! TGATATAACCATCTAGAATT+TGG - chr8_1:79811051-79811070 Msa1217470:intron 25.0%
! TCACAAAATGGTAAAATGAA+CGG + chr8_1:79811352-79811371 None:intergenic 25.0%
! GTTGAAAAATAAGACAACAT+TGG + chr8_1:79811412-79811431 None:intergenic 25.0%
!!! ATGTTGTCTTATTTTTCAAC+AGG - chr8_1:79811412-79811431 Msa1217470:intron 25.0%
! AATGACTCAGTTAAACTTAT+TGG - chr8_1:79811487-79811506 Msa1217470:intron 25.0%
! TGAGAAGAAAAAAGTAATTG+AGG - chr8_1:79811790-79811809 Msa1217470:intron 25.0%
!!! TAAATTTTAAGATTCAAGGG+AGG + chr8_1:79812000-79812019 None:intergenic 25.0%
!!! TTTTTAATTGCTTTGACATC+AGG + chr8_1:79812043-79812062 None:intergenic 25.0%
! ATGTCAAAGCAATTAAAAAG+CGG - chr8_1:79812044-79812063 Msa1217470:intron 25.0%
!!! AAGGAAAAACTCTCTTTTTT+GGG + chr8_1:79812220-79812239 None:intergenic 25.0%
!!! TAAGGAAAAACTCTCTTTTT+TGG + chr8_1:79812221-79812240 None:intergenic 25.0%
!!! TAACAGTACTTTTTTTTTGG+GGG + chr8_1:79812429-79812448 None:intergenic 25.0%
AATGGAACAATTATGAACCA+AGG + chr8_1:79804269-79804288 None:intergenic 30.0%
AGTCTATCTTTCAAGATTCT+TGG - chr8_1:79804512-79804531 Msa1217470:CDS 30.0%
! TTGGACATAATCAACTTGTT+GGG + chr8_1:79804920-79804939 None:intergenic 30.0%
AACTTATTTCCCATTTATGC+AGG - chr8_1:79804967-79804986 Msa1217470:CDS 30.0%
AAATCCAAACCTGCATAAAT+GGG + chr8_1:79804979-79804998 None:intergenic 30.0%
! TTATGCTGTTTGAGTAAGTT+AGG - chr8_1:79805575-79805594 Msa1217470:intron 30.0%
! GATAAAAGATGACAGAGTTT+TGG + chr8_1:79805686-79805705 None:intergenic 30.0%
! GAAATCATCGATTACATCTT+CGG + chr8_1:79806172-79806191 None:intergenic 30.0%
!!! ATTTTAAGGCGATAAACAAG+AGG + chr8_1:79806279-79806298 None:intergenic 30.0%
! TGATTTGATGCGACATTTTA+AGG + chr8_1:79806293-79806312 None:intergenic 30.0%
CATCAAAGAGAGATTTGATA+AGG - chr8_1:79806317-79806336 Msa1217470:intron 30.0%
GTTATTCCTATTGTTGGAAT+TGG - chr8_1:79806510-79806529 Msa1217470:intron 30.0%
TAAAGTTCTCTTGGTGAATT+GGG + chr8_1:79806704-79806723 None:intergenic 30.0%
GAACTTTACAAACCTTGATT+TGG - chr8_1:79806716-79806735 Msa1217470:intron 30.0%
TTCCAAAATGTATGATGTGT+TGG + chr8_1:79806925-79806944 None:intergenic 30.0%
! AACACATCATACATTTTGGA+AGG - chr8_1:79806924-79806943 Msa1217470:intron 30.0%
TATCCAGAATTGATTGAGAT+TGG - chr8_1:79807012-79807031 Msa1217470:intron 30.0%
ATCCAGAATTGATTGAGATT+GGG - chr8_1:79807013-79807032 Msa1217470:intron 30.0%
TTATCAAGGACAGTGAAATT+TGG - chr8_1:79807130-79807149 Msa1217470:intron 30.0%
TATCAAGGACAGTGAAATTT+GGG - chr8_1:79807131-79807150 Msa1217470:intron 30.0%
! TCATAACTTAATTTGATGGC+TGG + chr8_1:79807186-79807205 None:intergenic 30.0%
!! ATTTTGATGTTAGTGGGATA+TGG - chr8_1:79807280-79807299 Msa1217470:CDS 30.0%
! TTTTGATGTTAGTGGGATAT+GGG - chr8_1:79807281-79807300 Msa1217470:CDS 30.0%
CTGATTGCTAATATCTTTCA+AGG + chr8_1:79807346-79807365 None:intergenic 30.0%
!! CTTCAAGATTTTCAAGACTT+TGG - chr8_1:79807396-79807415 Msa1217470:intron 30.0%
TGAAGCTTTCTTGAAAACTT+TGG - chr8_1:79807626-79807645 Msa1217470:intron 30.0%
!!! TTTTAATTTGCCAATAGAGC+GGG + chr8_1:79807712-79807731 None:intergenic 30.0%
!!! GTTTTAATTTGCCAATAGAG+CGG + chr8_1:79807713-79807732 None:intergenic 30.0%
AGGAGAACAAAAACAAACAA+GGG + chr8_1:79808058-79808077 None:intergenic 30.0%
TGCTTTACTTAGAGATGATA+AGG - chr8_1:79808167-79808186 Msa1217470:intron 30.0%
TACTTAGAGATGATAAGGTA+TGG - chr8_1:79808172-79808191 Msa1217470:intron 30.0%
ACATAAGAACATTGCATTCA+TGG + chr8_1:79808242-79808261 None:intergenic 30.0%
TCTAGTATATTTAAGCAGGT+TGG - chr8_1:79808343-79808362 Msa1217470:intron 30.0%
ATATTTGCATTATCAAAGGG+AGG + chr8_1:79808396-79808415 None:intergenic 30.0%
! TGAACTGGTAATTTTCAACT+CGG - chr8_1:79808720-79808739 Msa1217470:intron 30.0%
ATCTTCAAATCAAAACCTTG+TGG + chr8_1:79809122-79809141 None:intergenic 30.0%
!!! ACAAGGTTTTGATTTGAAGA+TGG - chr8_1:79809121-79809140 Msa1217470:intron 30.0%
GATAACATTCTTAAGAAAGG+AGG - chr8_1:79809286-79809305 Msa1217470:intron 30.0%
AATTGAAGAAACCCTTGAAA+AGG - chr8_1:79809333-79809352 Msa1217470:intron 30.0%
! CTTGACTTTGGTATTTGTTT+TGG - chr8_1:79809460-79809479 Msa1217470:intron 30.0%
! GTTAAATTTTGTCTCATGCA+AGG - chr8_1:79809789-79809808 Msa1217470:intron 30.0%
!! AATGTCTCTAAAATTAGGGA+AGG + chr8_1:79809823-79809842 None:intergenic 30.0%
AGACATTAATATGTCATCCT+TGG - chr8_1:79809836-79809855 Msa1217470:intron 30.0%
!!! GTTTCGTGACATTATTTTAG+GGG - chr8_1:79809892-79809911 Msa1217470:intron 30.0%
TTCAACTAAGGGAATAGAAA+TGG + chr8_1:79809951-79809970 None:intergenic 30.0%
TAGTTTACATTGAGAGGTTA+GGG + chr8_1:79810051-79810070 None:intergenic 30.0%
ATAGTTTACATTGAGAGGTT+AGG + chr8_1:79810052-79810071 None:intergenic 30.0%
TCGTAATAGTTTACATTGAG+AGG + chr8_1:79810057-79810076 None:intergenic 30.0%
AGAAAGTGGGATAATTAGTT+CGG - chr8_1:79810113-79810132 Msa1217470:intron 30.0%
AAACTAAAAGCTGAGATGAA+TGG - chr8_1:79810138-79810157 Msa1217470:intron 30.0%
GATAGTGTTAAGGGAAAATA+TGG - chr8_1:79810182-79810201 Msa1217470:intron 30.0%
TGTTAAGGGAAAATATGGAA+AGG - chr8_1:79810187-79810206 Msa1217470:intron 30.0%
TAACTGTTAAGTCTATTCCA+GGG + chr8_1:79810950-79810969 None:intergenic 30.0%
CACAAAATGGTAAAATGAAC+GGG + chr8_1:79811351-79811370 None:intergenic 30.0%
TATTGGATGAAGATGTCATT+AGG - chr8_1:79811504-79811523 Msa1217470:intron 30.0%
TCAATCTCTATTCTCTTTAC+CGG - chr8_1:79811709-79811728 Msa1217470:intron 30.0%
! GGATTGAAGATTTGATTTCT+CGG - chr8_1:79812065-79812084 Msa1217470:intron 30.0%
! GATTGAAGATTTGATTTCTC+GGG - chr8_1:79812066-79812085 Msa1217470:intron 30.0%
GCTAAGTACTTGAACATATT+TGG + chr8_1:79812118-79812137 None:intergenic 30.0%
ATATGATTGAGCAAATGAAG+TGG - chr8_1:79812149-79812168 Msa1217470:intron 30.0%
!! AAAAGCAAAAAAGTTGGTGA+GGG + chr8_1:79812345-79812364 None:intergenic 30.0%
GCAATCAAAAGCAAAAAAGT+TGG + chr8_1:79812351-79812370 None:intergenic 30.0%
!!! AACAGTACTTTTTTTTTGGG+GGG + chr8_1:79812428-79812447 None:intergenic 30.0%
! AGTACTGTTATTTGTAGCTT+CGG - chr8_1:79812439-79812458 Msa1217470:intron 30.0%
!! AATCTCATAGCTTTGACAAG+TGG + chr8_1:79804193-79804212 None:intergenic 35.0%
TTATTTATGGTCTCATGTCG+TGG + chr8_1:79804219-79804238 None:intergenic 35.0%
TGACAGAACACAACTAGAAA+TGG + chr8_1:79804287-79804306 None:intergenic 35.0%
TAGTTGTGTTCTGTCAACAA+AGG - chr8_1:79804291-79804310 Msa1217470:three_prime_UTR 35.0%
AGTTGTGTTCTGTCAACAAA+GGG - chr8_1:79804292-79804311 Msa1217470:three_prime_UTR 35.0%
AACAGAACCGCTTCATAAAT+TGG - chr8_1:79804320-79804339 Msa1217470:three_prime_UTR 35.0%
TCATGAGTAACAATGTGAGA+AGG - chr8_1:79804673-79804692 Msa1217470:intron 35.0%
ACACATACCAACTTTGATGA+CGG + chr8_1:79804805-79804824 None:intergenic 35.0%
TGGTATGTGTAGTTAAGTGT+TGG - chr8_1:79804815-79804834 Msa1217470:CDS 35.0%
GGTATGTGTAGTTAAGTGTT+GGG - chr8_1:79804816-79804835 Msa1217470:CDS 35.0%
!! TCATTGACTTTGTTGTCTTC+AGG + chr8_1:79804886-79804905 None:intergenic 35.0%
CTTGGACATAATCAACTTGT+TGG + chr8_1:79804921-79804940 None:intergenic 35.0%
ATTCCTCTCATTGTGATTCT+TGG + chr8_1:79804939-79804958 None:intergenic 35.0%
ATTTCCCATTTATGCAGGTT+TGG - chr8_1:79804972-79804991 Msa1217470:CDS 35.0%
CAAATCCAAACCTGCATAAA+TGG + chr8_1:79804980-79804999 None:intergenic 35.0%
TTTATGCAGGTTTGGATTTG+AGG - chr8_1:79804980-79804999 Msa1217470:CDS 35.0%
TCAAGAGTTCATTATGCATG+TGG - chr8_1:79805038-79805057 Msa1217470:CDS 35.0%
CTTCTATGTACAGCAATGAA+AGG + chr8_1:79805437-79805456 None:intergenic 35.0%
!!! GCTCAATTGGTTTTCAAAGT+AGG + chr8_1:79805820-79805839 None:intergenic 35.0%
CAATCAGGTTAAAGCTCAAT+TGG + chr8_1:79805833-79805852 None:intergenic 35.0%
AAGCAAAAGTGAAAGCAATC+AGG + chr8_1:79805848-79805867 None:intergenic 35.0%
!! TTGCTTTCACTTTTGCTTCT+TGG - chr8_1:79805850-79805869 Msa1217470:intron 35.0%
! TCAAAGCACTTTAGAGGATA+AGG + chr8_1:79805890-79805909 None:intergenic 35.0%
! TAAAGCTCAAAGCACTTTAG+AGG + chr8_1:79805896-79805915 None:intergenic 35.0%
GCTTCCAAAACCAAACAAAA+TGG - chr8_1:79805923-79805942 Msa1217470:CDS 35.0%
!!! TCTGCCATTTTGTTTGGTTT+TGG + chr8_1:79805930-79805949 None:intergenic 35.0%
!!! AGTGATTCTGCCATTTTGTT+TGG + chr8_1:79805936-79805955 None:intergenic 35.0%
AGAACAATGAACTACGTGAA+TGG - chr8_1:79806115-79806134 Msa1217470:intron 35.0%
CTCTCTGTTATTCCTATTGT+TGG - chr8_1:79806504-79806523 Msa1217470:intron 35.0%
ATTCCTATTGTTGGAATTGG+AGG - chr8_1:79806513-79806532 Msa1217470:intron 35.0%
AATCCTCCAATTCCAACAAT+AGG + chr8_1:79806519-79806538 None:intergenic 35.0%
ATTGTTGGAATTGGAGGATT+AGG - chr8_1:79806519-79806538 Msa1217470:intron 35.0%
! AGACTTTTCCATTGAAGATG+TGG - chr8_1:79806589-79806608 Msa1217470:intron 35.0%
! GACTTTTCCATTGAAGATGT+GGG - chr8_1:79806590-79806609 Msa1217470:intron 35.0%
GTAAAGTTCTCTTGGTGAAT+TGG + chr8_1:79806705-79806724 None:intergenic 35.0%
CAAGGTTTGTAAAGTTCTCT+TGG + chr8_1:79806713-79806732 None:intergenic 35.0%
TAAAAAGTTCTTGCTCGTCT+TGG - chr8_1:79806776-79806795 Msa1217470:intron 35.0%
! TTAATACAAGATGGTGCTGA+AGG - chr8_1:79806846-79806865 Msa1217470:intron 35.0%
CACTCAATTGCTGAAATGAT+GGG - chr8_1:79806897-79806916 Msa1217470:intron 35.0%
! CACCAACACATCATACATTT+TGG - chr8_1:79806920-79806939 Msa1217470:intron 35.0%
CCTTGTCTGTATTTGTCAAA+CGG - chr8_1:79806964-79806983 Msa1217470:intron 35.0%
CTTGTCTGTATTTGTCAAAC+GGG - chr8_1:79806965-79806984 Msa1217470:intron 35.0%
! TTGTCAAACGGGTTTAAAGA+TGG - chr8_1:79806976-79806995 Msa1217470:intron 35.0%
TTCCCAATCTCAATCAATTC+TGG + chr8_1:79807018-79807037 None:intergenic 35.0%
AGAACTTCCCAATGTTCTTA+TGG + chr8_1:79807076-79807095 None:intergenic 35.0%
CGAAGATTGGAAGTTTATCA+AGG - chr8_1:79807116-79807135 Msa1217470:intron 35.0%
! TTGCTTCTCTCTCTTTGAAA+AGG - chr8_1:79807239-79807258 Msa1217470:intron 35.0%
! TTCAAGGTTTTACCTCTGTT+TGG + chr8_1:79807330-79807349 None:intergenic 35.0%
!! CAAGATTTTCAAGACTTTGG+TGG - chr8_1:79807399-79807418 Msa1217470:intron 35.0%
!! TCTTGAAAACTTTGGTGTCA+AGG - chr8_1:79807634-79807653 Msa1217470:intron 35.0%
!! TTTAATTTGCCAATAGAGCG+GGG + chr8_1:79807711-79807730 None:intergenic 35.0%
CAGGAGAACAAAAACAAACA+AGG + chr8_1:79808059-79808078 None:intergenic 35.0%
!!! CTTGTTTGTTTTTGTTCTCC+TGG - chr8_1:79808057-79808076 Msa1217470:intron 35.0%
! TAAGTGATGCAAGTTTTTCC+AGG + chr8_1:79808078-79808097 None:intergenic 35.0%
!!! CTATTTTCTAAAATACCCCG+TGG - chr8_1:79808307-79808326 Msa1217470:CDS 35.0%
! AGTATATTTAAGCAGGTTGG+TGG - chr8_1:79808346-79808365 Msa1217470:intron 35.0%
GTGGTAACATGCTGATAAAA+AGG + chr8_1:79808485-79808504 None:intergenic 35.0%
AGATGCAGCTAGTAACAAAA+AGG - chr8_1:79808535-79808554 Msa1217470:intron 35.0%
TTTACTTATTCCAGGCTGAA+AGG - chr8_1:79808586-79808605 Msa1217470:intron 35.0%
AACAAATAAAGGAGGTGAAC+TGG - chr8_1:79808705-79808724 Msa1217470:intron 35.0%
! GAACTGGTAATTTTCAACTC+GGG - chr8_1:79808721-79808740 Msa1217470:intron 35.0%
! AACTGGTAATTTTCAACTCG+GGG - chr8_1:79808722-79808741 Msa1217470:intron 35.0%
ATGTGATTTCTTACTGCTGA+AGG - chr8_1:79808845-79808864 Msa1217470:intron 35.0%
GATCATATAGGCTCTTAAAG+AGG - chr8_1:79809195-79809214 Msa1217470:intron 35.0%
!! TTTGAGGTCTTTTGCAACAA+AGG - chr8_1:79809220-79809239 Msa1217470:intron 35.0%
!!! ATTTGTTTTGGTCTATCTGC+AGG - chr8_1:79809472-79809491 Msa1217470:intron 35.0%
! GGCTTTATCACCAATTGATT+AGG - chr8_1:79809913-79809932 Msa1217470:intron 35.0%
! GGAATTGACTCCTAATCAAT+TGG + chr8_1:79809926-79809945 None:intergenic 35.0%
TATTCCCTTAGTTGAATCCT+TGG - chr8_1:79809955-79809974 Msa1217470:intron 35.0%
AAAGCCAAGGATTCAACTAA+GGG + chr8_1:79809962-79809981 None:intergenic 35.0%
AAGGGAAAATATGGAAAGGA+AGG - chr8_1:79810191-79810210 Msa1217470:intron 35.0%
AGGGAAAATATGGAAAGGAA+GGG - chr8_1:79810192-79810211 Msa1217470:intron 35.0%
! CAACGAGACAAGTATTGTTA+TGG - chr8_1:79810294-79810313 Msa1217470:intron 35.0%
! TTGTTTAATTAGCCGCTTTC+AGG + chr8_1:79810525-79810544 None:intergenic 35.0%
! ATTCTTGTTTGGTTGCTTTC+AGG - chr8_1:79810622-79810641 Msa1217470:intron 35.0%
ACAAAATTGAAGCAACAGTG+TGG - chr8_1:79810711-79810730 Msa1217470:intron 35.0%
GTAACTGTTAAGTCTATTCC+AGG + chr8_1:79810951-79810970 None:intergenic 35.0%
ACTGAACACCAAATTCTAGA+TGG + chr8_1:79811062-79811081 None:intergenic 35.0%
!! TAGAATTTGGTGTTCAGTGT+TGG - chr8_1:79811064-79811083 Msa1217470:intron 35.0%
CAAAGCACAGAAAACTTACA+TGG - chr8_1:79811194-79811213 Msa1217470:intron 35.0%
ACTTACATGGATTTACTCCT+TGG - chr8_1:79811207-79811226 Msa1217470:intron 35.0%
CTTACATGGATTTACTCCTT+GGG - chr8_1:79811208-79811227 Msa1217470:intron 35.0%
AAACTTCCCACTTATGTTAC+AGG + chr8_1:79811236-79811255 None:intergenic 35.0%
AGATGGTAAGTGATATAACC+TGG + chr8_1:79811294-79811313 None:intergenic 35.0%
CATTATCACAGATAAGCAGA+TGG + chr8_1:79811311-79811330 None:intergenic 35.0%
AGAATAACTCAGTCTATCAG+AGG + chr8_1:79811462-79811481 None:intergenic 35.0%
!! GGTGATATCGTTTTTGTGTT+TGG + chr8_1:79811578-79811597 None:intergenic 35.0%
CAAAGTTCACTGACAAAATG+AGG - chr8_1:79811621-79811640 Msa1217470:intron 35.0%
!!! ACTTTTTTCTTCTCATCCAC+AGG + chr8_1:79811785-79811804 None:intergenic 35.0%
! TATGAAGAGTCGGAAAGTTT+TGG - chr8_1:79811862-79811881 Msa1217470:intron 35.0%
! ATGAAGAGTCGGAAAGTTTT+GGG - chr8_1:79811863-79811882 Msa1217470:intron 35.0%
! TTTGATTTCTCGGGATTACT+TGG - chr8_1:79812075-79812094 Msa1217470:intron 35.0%
!! TTCCTTAGTTTTCTCGAAAG+AGG - chr8_1:79812234-79812253 Msa1217470:intron 35.0%
GCAAATGTAGATTACTGTTG+TGG - chr8_1:79812261-79812280 Msa1217470:intron 35.0%
!! CAAAAGCAAAAAAGTTGGTG+AGG + chr8_1:79812346-79812365 None:intergenic 35.0%
!!! ACAGTACTTTTTTTTTGGGG+GGG + chr8_1:79812427-79812446 None:intergenic 35.0%
TTATCAGCTTAGAAATCACC+AGG - chr8_1:79812478-79812497 Msa1217470:intron 35.0%
ACTCTCACCAACAAACAAAG+AGG + chr8_1:79804024-79804043 None:intergenic 40.0%
! GAGAGTATAAACATGCTGTC+TGG - chr8_1:79804038-79804057 Msa1217470:three_prime_UTR 40.0%
! AACATGCTGTCTGGTTTGAT+CGG - chr8_1:79804047-79804066 Msa1217470:three_prime_UTR 40.0%
ACTAGTACCGTCATCAAAGT+TGG - chr8_1:79804795-79804814 Msa1217470:CDS 40.0%
TGTCCAAGAATCACAATGAG+AGG - chr8_1:79804933-79804952 Msa1217470:intron 40.0%
AGGACAAATCCTCTTGAAGA+GGG - chr8_1:79805000-79805019 Msa1217470:CDS 40.0%
GAGTTCATTATGCATGTGGA+AGG - chr8_1:79805042-79805061 Msa1217470:CDS 40.0%
!!! GACAGAGTTTTGGTTAAGCA+TGG + chr8_1:79805676-79805695 None:intergenic 40.0%
TTCTAGTGTCTATTTGCCAC+TGG + chr8_1:79805783-79805802 None:intergenic 40.0%
! AAGCACTTTAGAGGATAAGG+TGG + chr8_1:79805887-79805906 None:intergenic 40.0%
!!! GTTTGGTTTTGGAAGCAATC+AGG + chr8_1:79805919-79805938 None:intergenic 40.0%
!! ACTCGTCAAAGAAGTGTTGT+TGG - chr8_1:79806071-79806090 Msa1217470:intron 40.0%
AAGCACATCATCAACACATC+AGG - chr8_1:79806210-79806229 Msa1217470:intron 40.0%
ACACATCAGGTAGCATCAAA+AGG - chr8_1:79806223-79806242 Msa1217470:intron 40.0%
ATCAGGTAGCATCAAAAGGA+AGG - chr8_1:79806227-79806246 Msa1217470:intron 40.0%
TTGATAAGGTTGCTGCTGAT+AGG - chr8_1:79806331-79806350 Msa1217470:intron 40.0%
CTGATCATCGTGTTGTCAAA+AGG - chr8_1:79806382-79806401 Msa1217470:intron 40.0%
TGTGAGTGATTCTGATGTGA+TGG - chr8_1:79806425-79806444 Msa1217470:intron 40.0%
GTGAGTGATTCTGATGTGAT+GGG - chr8_1:79806426-79806445 Msa1217470:intron 40.0%
AGGAAAAACTGCACTTGCAA+AGG - chr8_1:79806539-79806558 Msa1217470:intron 40.0%
CACTAACACTAGCTGAATTG+AGG + chr8_1:79806662-79806681 None:intergenic 40.0%
CTCAATTCAGCTAGTGTTAG+TGG - chr8_1:79806660-79806679 Msa1217470:intron 40.0%
TTCTCTTGGTGAATTGGGTT+AGG + chr8_1:79806699-79806718 None:intergenic 40.0%
TTTGTAGCTGCTCCAAATCA+AGG + chr8_1:79806731-79806750 None:intergenic 40.0%
CATCTGAGAAATGAGATTGC+TGG - chr8_1:79806753-79806772 Msa1217470:intron 40.0%
GAACCAGGATCATGTCAAAT+GGG - chr8_1:79806809-79806828 Msa1217470:intron 40.0%
CCATCATTTCAGCAATTGAG+TGG + chr8_1:79806899-79806918 None:intergenic 40.0%
CCACTCAATTGCTGAAATGA+TGG - chr8_1:79806896-79806915 Msa1217470:intron 40.0%
AATACAGACAAGGAATCCTC+TGG + chr8_1:79806957-79806976 None:intergenic 40.0%
CCGTTTGACAAATACAGACA+AGG + chr8_1:79806967-79806986 None:intergenic 40.0%
TCCTTTGGCCATAAGAACAT+TGG - chr8_1:79807065-79807084 Msa1217470:intron 40.0%
CCTTTGGCCATAAGAACATT+GGG - chr8_1:79807066-79807085 Msa1217470:intron 40.0%
TTTCTTCCACAACCAAACAG+AGG - chr8_1:79807315-79807334 Msa1217470:CDS 40.0%
! GTTTTACCTCTGTTTGGTTG+TGG + chr8_1:79807324-79807343 None:intergenic 40.0%
!! GATTTTCAAGACTTTGGTGG+TGG - chr8_1:79807402-79807421 Msa1217470:intron 40.0%
!! AAGAACCATGCTATTTCCCA+AGG - chr8_1:79807593-79807612 Msa1217470:intron 40.0%
!! AGAACCATGCTATTTCCCAA+GGG - chr8_1:79807594-79807613 Msa1217470:intron 40.0%
TGTCAAGGTGCAAATTCTTG+CGG - chr8_1:79807649-79807668 Msa1217470:intron 40.0%
! TGGTCTTTTGCCATGTTCAA+TGG - chr8_1:79807950-79807969 Msa1217470:intron 40.0%
TTCAGTGTGAAGACTTGTCA+AGG - chr8_1:79808275-79808294 Msa1217470:CDS 40.0%
AAGACTTGTCAAGGATGTTC+AGG - chr8_1:79808284-79808303 Msa1217470:CDS 40.0%
TATCAGCATGTTACCACTGA+AGG - chr8_1:79808488-79808507 Msa1217470:CDS 40.0%
GATGAAAGACTACTACGCTT+AGG - chr8_1:79808632-79808651 Msa1217470:intron 40.0%
AAGACTACTACGCTTAGGAT+CGG - chr8_1:79808637-79808656 Msa1217470:intron 40.0%
GATTTCAGTGCATTGTAGAC+AGG - chr8_1:79808767-79808786 Msa1217470:intron 40.0%
AATGTCTACAGGCAGAGAAA+AGG - chr8_1:79808917-79808936 Msa1217470:intron 40.0%
ATGTCTACAGGCAGAGAAAA+GGG - chr8_1:79808918-79808937 Msa1217470:intron 40.0%
GCAGAGAAAAGGGATATTGT+TGG - chr8_1:79808928-79808947 Msa1217470:intron 40.0%
!! GGTCTCTTTAGGTTTTTGTC+CGG - chr8_1:79809028-79809047 Msa1217470:intron 40.0%
CATGTAGCTCAATCACTTTC+CGG + chr8_1:79809050-79809069 None:intergenic 40.0%
! AAGAGTGTGATTCTGGAAAC+AGG + chr8_1:79809097-79809116 None:intergenic 40.0%
! TGTGGAAAAGAGTGTGATTC+TGG + chr8_1:79809104-79809123 None:intergenic 40.0%
! GAATCACACTCTTTTCCACA+AGG - chr8_1:79809104-79809123 Msa1217470:intron 40.0%
!!! TTTTGCAACAAAGGTGTTGC+TGG - chr8_1:79809229-79809248 Msa1217470:intron 40.0%
! TATGTTGCGGACCTTTTCAA+GGG + chr8_1:79809347-79809366 None:intergenic 40.0%
! ATATGTTGCGGACCTTTTCA+AGG + chr8_1:79809348-79809367 None:intergenic 40.0%
! GACATACATGGTCTTGACTT+TGG - chr8_1:79809448-79809467 Msa1217470:intron 40.0%
GCTCGCTTATATTAGTGACA+AGG - chr8_1:79809505-79809524 Msa1217470:intron 40.0%
!! GGTTGTTGTTGTTTGGAGTT+TGG + chr8_1:79809594-79809613 None:intergenic 40.0%
! AAGGCTTGGTTGTTGTTGTT+TGG + chr8_1:79809601-79809620 None:intergenic 40.0%
TTCAGTGAATCAGTAGTCCA+CGG + chr8_1:79809734-79809753 None:intergenic 40.0%
ATTGCTGCTACTACCATTCT+CGG - chr8_1:79809754-79809773 Msa1217470:intron 40.0%
CTCTTAGAAACAACCGAGAA+TGG + chr8_1:79809770-79809789 None:intergenic 40.0%
GAAACAAGCGATTAGGTGAA+AGG + chr8_1:79809862-79809881 None:intergenic 40.0%
! TCACCTAATCGCTTGTTTCT+TGG - chr8_1:79809863-79809882 Msa1217470:intron 40.0%
TCTCCAAGAAACAAGCGATT+AGG + chr8_1:79809869-79809888 None:intergenic 40.0%
ACTAAGGGAATAGAAATGGC+TGG + chr8_1:79809947-79809966 None:intergenic 40.0%
GAAAGCCAAGGATTCAACTA+AGG + chr8_1:79809963-79809982 None:intergenic 40.0%
GCTTAAAATGTGGAAAGCCA+AGG + chr8_1:79809975-79809994 None:intergenic 40.0%
! GTCTGCTTTGGCTTAAAATG+TGG + chr8_1:79809985-79810004 None:intergenic 40.0%
AAATTGAAGCAACAGTGTGG+TGG - chr8_1:79810714-79810733 Msa1217470:intron 40.0%
TGGACAGTTTACCTCAAAGA+TGG - chr8_1:79810734-79810753 Msa1217470:intron 40.0%
CAGTTTACCTCAAAGATGGA+AGG - chr8_1:79810738-79810757 Msa1217470:intron 40.0%
TACCTCAAAGATGGAAGGAA+TGG - chr8_1:79810743-79810762 Msa1217470:intron 40.0%
!!! TGATTTTTTTCACTCCCACC+AGG - chr8_1:79810851-79810870 Msa1217470:intron 40.0%
!! GGAGAATCAAACTAGCTTTG+AGG - chr8_1:79810896-79810915 Msa1217470:intron 40.0%
TGTTAAGTCTATTCCAGGGT+CGG + chr8_1:79810946-79810965 None:intergenic 40.0%
TCTCAATCTTCCTGCAGAAA+TGG - chr8_1:79811013-79811032 Msa1217470:intron 40.0%
TTCCTGCAGAAATGGTAATC+TGG - chr8_1:79811021-79811040 Msa1217470:intron 40.0%
ATCCAGATTACCATTTCTGC+AGG + chr8_1:79811026-79811045 None:intergenic 40.0%
ACTTATGTTACAGGTACCCA+AGG + chr8_1:79811227-79811246 None:intergenic 40.0%
TTGGGTACCTGTAACATAAG+TGG - chr8_1:79811226-79811245 Msa1217470:intron 40.0%
TGGGTACCTGTAACATAAGT+GGG - chr8_1:79811227-79811246 Msa1217470:intron 40.0%
GAAGTTTGACCCAAAAACAG+TGG - chr8_1:79811249-79811268 Msa1217470:intron 40.0%
!! CAACAAGCTCCACTGTTTTT+GGG + chr8_1:79811261-79811280 None:intergenic 40.0%
! ACAACAAGCTCCACTGTTTT+TGG + chr8_1:79811262-79811281 None:intergenic 40.0%
GGTAAGTGATATAACCTGGT+AGG + chr8_1:79811290-79811309 None:intergenic 40.0%
ATGGTAAAATGAACGGGTGA+GGG + chr8_1:79811345-79811364 None:intergenic 40.0%
AATGGTAAAATGAACGGGTG+AGG + chr8_1:79811346-79811365 None:intergenic 40.0%
! TTACCATTTTGTGATGTCCG+CGG - chr8_1:79811358-79811377 Msa1217470:intron 40.0%
GAAATCCATACGAAAATCCG+CGG + chr8_1:79811378-79811397 None:intergenic 40.0%
ACTTTGCACATGACAAAGAG+TGG + chr8_1:79811535-79811554 None:intergenic 40.0%
AGTTCACTGACAAAATGAGG+AGG - chr8_1:79811624-79811643 Msa1217470:intron 40.0%
TGACAAAATGAGGAGGATCA+AGG - chr8_1:79811631-79811650 Msa1217470:intron 40.0%
! TTTTTCTTCTCATCCACAGG+AGG + chr8_1:79811782-79811801 None:intergenic 40.0%
CTTCATAATGCGCACAATTG+AGG + chr8_1:79811849-79811868 None:intergenic 40.0%
TTGTGCGCATTATGAAGAGT+CGG - chr8_1:79811852-79811871 Msa1217470:intron 40.0%
GGGCTATCAACAGTTAGTTA+TGG - chr8_1:79811883-79811902 Msa1217470:intron 40.0%
GGGAGGTAAAAAAACACACA+AGG + chr8_1:79811983-79812002 None:intergenic 40.0%
GTTGCAACTAGCAAAACAAG+AGG - chr8_1:79812174-79812193 Msa1217470:intron 40.0%
CTCCTCTTTCGAGAAAACTA+AGG + chr8_1:79812239-79812258 None:intergenic 40.0%
AATGAGCTGGAACAACTCAA+TGG + chr8_1:79812318-79812337 None:intergenic 40.0%
! ATTGAGTTGTTCCAGCTCAT+TGG - chr8_1:79812317-79812336 Msa1217470:intron 40.0%
GCAGCAAATAAGCTATGAGA+TGG + chr8_1:79812381-79812400 None:intergenic 40.0%
!!! ACTTTTTTTTTGGGGGGGTT+GGG + chr8_1:79812422-79812441 None:intergenic 40.0%
!!! TACTTTTTTTTTGGGGGGGT+TGG + chr8_1:79812423-79812442 None:intergenic 40.0%
CTTAGAAATCACCAGGTGAA+TGG - chr8_1:79812485-79812504 Msa1217470:intron 40.0%
AGAAGACATATCCATTCACC+TGG + chr8_1:79812499-79812518 None:intergenic 40.0%
TTCAAGATTCTTGGCAGTCG+TGG - chr8_1:79804521-79804540 Msa1217470:CDS 45.0%
! TTCTTGGCAGTCGTGGTTTT+AGG - chr8_1:79804528-79804547 Msa1217470:CDS 45.0%
GAGGACAAATCCTCTTGAAG+AGG - chr8_1:79804999-79805018 Msa1217470:CDS 45.0%
GGACAAATCCTCTTGAAGAG+GGG - chr8_1:79805001-79805020 Msa1217470:CDS 45.0%
GACAAATCCTCTTGAAGAGG+GGG - chr8_1:79805002-79805021 Msa1217470:CDS 45.0%
ACAAATCCTCTTGAAGAGGG+GGG - chr8_1:79805003-79805022 Msa1217470:CDS 45.0%
TGACCTACTCTGATTTCCAG+TGG - chr8_1:79805764-79805783 Msa1217470:intron 45.0%
TTGCCACTGGAAATCAGAGT+AGG + chr8_1:79805770-79805789 None:intergenic 45.0%
ATGGCAGAATCACTCCTCTT+TGG - chr8_1:79805942-79805961 Msa1217470:CDS 45.0%
AAAACTTGCATCCGTTGCTG+TGG - chr8_1:79805986-79806005 Msa1217470:intron 45.0%
TGGACGCTGAACAAAAGCAA+TGG - chr8_1:79806091-79806110 Msa1217470:intron 45.0%
! CATCGATTACATCTTCGGCA+TGG + chr8_1:79806167-79806186 None:intergenic 45.0%
! AATCGATGATTTCGAGTGCG+AGG - chr8_1:79806179-79806198 Msa1217470:intron 45.0%
!! GTTGATGATGTGCTTTCGCA+AGG + chr8_1:79806205-79806224 None:intergenic 45.0%
ACACACACCCACATCTTCAA+TGG + chr8_1:79806600-79806619 None:intergenic 45.0%
GGAACCAGGATCATGTCAAA+TGG - chr8_1:79806808-79806827 Msa1217470:intron 45.0%
CAACCCATTTGACATGATCC+TGG + chr8_1:79806815-79806834 None:intergenic 45.0%
TTTGGAAGGTCTTTCTCCAG+AGG - chr8_1:79806938-79806957 Msa1217470:intron 45.0%
CCCAATGTTCTTATGGCCAA+AGG + chr8_1:79807069-79807088 None:intergenic 45.0%
TGATGTTAGTGGGATATGGG+AGG - chr8_1:79807284-79807303 Msa1217470:CDS 45.0%
GTTCTTAGACCAGTAGGAAC+TGG + chr8_1:79807579-79807598 None:intergenic 45.0%
AGCATGGTTCTTAGACCAGT+AGG + chr8_1:79807585-79807604 None:intergenic 45.0%
GCTTCATTGTTTGCTCCCTT+GGG + chr8_1:79807612-79807631 None:intergenic 45.0%
AGCTTCATTGTTTGCTCCCT+TGG + chr8_1:79807613-79807632 None:intergenic 45.0%
GTCAAGGTGCAAATTCTTGC+GGG - chr8_1:79807650-79807669 Msa1217470:intron 45.0%
GGAGTTTGCACACTGAATCA+GGG + chr8_1:79807782-79807801 None:intergenic 45.0%
TGGAGTTTGCACACTGAATC+AGG + chr8_1:79807783-79807802 None:intergenic 45.0%
GGTTCAAAGTCTGCAGATTC+TGG + chr8_1:79807803-79807822 None:intergenic 45.0%
TGCTCGCAATCCATTGAACA+TGG + chr8_1:79807963-79807982 None:intergenic 45.0%
!! TTCTAAAATACCCCGTGGCT+TGG - chr8_1:79808312-79808331 Msa1217470:CDS 45.0%
TAGAAACAGGATCCAAGCCA+CGG + chr8_1:79808327-79808346 None:intergenic 45.0%
AGAACGTAAACCTTTCAGCC+TGG + chr8_1:79808599-79808618 None:intergenic 45.0%
AGTGCATTGTAGACAGGACA+TGG - chr8_1:79808773-79808792 Msa1217470:intron 45.0%
AAGGGATATTGTTGGTACGC+AGG - chr8_1:79808936-79808955 Msa1217470:intron 45.0%
TGAGCTACATGACAAGTACC+TGG - chr8_1:79809059-79809078 Msa1217470:intron 45.0%
AACAGGAGTTCACATATGCC+AGG + chr8_1:79809080-79809099 None:intergenic 45.0%
! GGCTCTTAAAGAGGCTTTTG+AGG - chr8_1:79809204-79809223 Msa1217470:intron 45.0%
!!! TGTTTTGGTCTATCTGCAGG+TGG - chr8_1:79809475-79809494 Msa1217470:intron 45.0%
ACTTGTTTGCCGAGTTCTAC+AGG - chr8_1:79809528-79809547 Msa1217470:intron 45.0%
! CAAGCCTTATCCCACTAAGT+GGG - chr8_1:79809613-79809632 Msa1217470:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG - chr8_1:79809614-79809633 Msa1217470:intron 45.0%
AAACGTTACCCCCACTTAGT+GGG + chr8_1:79809626-79809645 None:intergenic 45.0%
AAAACGTTACCCCCACTTAG+TGG + chr8_1:79809627-79809646 None:intergenic 45.0%
TGGCTTAAGCAAGTCTGCTT+TGG + chr8_1:79809997-79810016 None:intergenic 45.0%
GAGAGGTTAGGGCTTAAAGT+TGG + chr8_1:79810040-79810059 None:intergenic 45.0%
GACCATTCCTTCCATCTTTG+AGG + chr8_1:79810748-79810767 None:intergenic 45.0%
CGTCAAATCTGTAACCTGGT+GGG + chr8_1:79810868-79810887 None:intergenic 45.0%
TACAGATTTGACGCTGGCAA+AGG - chr8_1:79810875-79810894 Msa1217470:intron 45.0%
! ACAGTTACAGTTCTGACCAC+TGG - chr8_1:79810963-79810982 Msa1217470:intron 45.0%
ATAACTAGGCCAGAAACCAG+TGG + chr8_1:79810982-79811001 None:intergenic 45.0%
AATCCGCGGACATCACAAAA+TGG + chr8_1:79811364-79811383 None:intergenic 45.0%
! CTCTTTACCGGACTTTTGAG+TGG - chr8_1:79811721-79811740 Msa1217470:intron 45.0%
TTGTGGATGTGTGCTCAAGT+TGG - chr8_1:79812278-79812297 Msa1217470:intron 45.0%
TGTGGATGTGTGCTCAAGTT+GGG - chr8_1:79812279-79812298 Msa1217470:intron 45.0%
!!! TTTTTTTTTGGGGGGGTTGG+GGG + chr8_1:79812420-79812439 None:intergenic 45.0%
!!! CTTTTTTTTTGGGGGGGTTG+GGG + chr8_1:79812421-79812440 None:intergenic 45.0%
!!! TATTTAAATTTCTATTTTAA+TGG + chr8_1:79805072-79805091 None:intergenic 5.0%
!!! ACTTTTAAATATATAATATT+TGG - chr8_1:79805272-79805291 Msa1217470:intron 5.0%
AGAATCACTCCTCTTTGGCG+TGG - chr8_1:79805947-79805966 Msa1217470:CDS 50.0%
ATGATTCTGCCACGCCAAAG+AGG + chr8_1:79805959-79805978 None:intergenic 50.0%
GGCGTGGCAGAATCATTCAT+CGG - chr8_1:79805963-79805982 Msa1217470:intron 50.0%
! GGAAGCTTGTTCCACAGCAA+CGG + chr8_1:79806000-79806019 None:intergenic 50.0%
GCTGCTGATAGGCATCAGTT+TGG - chr8_1:79806342-79806361 Msa1217470:intron 50.0%
TGCTCGTCTTGGACGATGTA+TGG - chr8_1:79806787-79806806 Msa1217470:intron 50.0%
CTTGGACGATGTATGGAACC+AGG - chr8_1:79806794-79806813 Msa1217470:intron 50.0%
AAAATGTGGGGGGCTTCCTT+TGG - chr8_1:79807050-79807069 Msa1217470:intron 50.0%
ATCAGTTTCTGCACGAGCTG+CGG - chr8_1:79807361-79807380 Msa1217470:CDS 50.0%
GACCAGTAGGAACTGGTGTT+AGG + chr8_1:79807572-79807591 None:intergenic 50.0%
TGCTCCCTTGGGAAATAGCA+TGG + chr8_1:79807601-79807620 None:intergenic 50.0%
GTTTGCACACTGAATCAGGG+AGG + chr8_1:79807779-79807798 None:intergenic 50.0%
CTGCAGACTTTGAACCTCAG+TGG - chr8_1:79807807-79807826 Msa1217470:intron 50.0%
!! GCTCCTTGAGAAAGAGCACT+CGG - chr8_1:79808137-79808156 Msa1217470:intron 50.0%
!! CTCCTTGAGAAAGAGCACTC+GGG - chr8_1:79808138-79808157 Msa1217470:intron 50.0%
ATCCCGAGTGCTCTTTCTCA+AGG + chr8_1:79808143-79808162 None:intergenic 50.0%
AGAAACAGGATCCAAGCCAC+GGG + chr8_1:79808326-79808345 None:intergenic 50.0%
GCATGTTACCACTGAAGGCA+TGG - chr8_1:79808493-79808512 Msa1217470:CDS 50.0%
TATTGTTGGTACGCAGGAGC+AGG - chr8_1:79808942-79808961 Msa1217470:intron 50.0%
CCACTTAGTGGGATAAGGCT+TGG + chr8_1:79809615-79809634 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG - chr8_1:79809612-79809631 Msa1217470:intron 50.0%
! AGCCTTATCCCACTAAGTGG+GGG - chr8_1:79809615-79809634 Msa1217470:intron 50.0%
TACCCCCACTTAGTGGGATA+AGG + chr8_1:79809620-79809639 None:intergenic 50.0%
AGCGATTAGGTGAAAGGCCA+AGG + chr8_1:79809856-79809875 None:intergenic 50.0%
GCGTCAAATCTGTAACCTGG+TGG + chr8_1:79810869-79810888 None:intergenic 50.0%
CCAGCGTCAAATCTGTAACC+TGG + chr8_1:79810872-79810891 None:intergenic 50.0%
CCAGGTTACAGATTTGACGC+TGG - chr8_1:79810869-79810888 Msa1217470:intron 50.0%
AATACTCCTAATGCCGACCC+TGG - chr8_1:79810930-79810949 Msa1217470:intron 50.0%
TCTATTCCAGGGTCGGCATT+AGG + chr8_1:79810939-79810958 None:intergenic 50.0%
!! CAGTTCTGACCACTGGTTTC+TGG - chr8_1:79810970-79810989 Msa1217470:intron 50.0%
TCTCTCTCTCTCTCTCTCTC+AGG - chr8_1:79811123-79811142 Msa1217470:intron 50.0%
!! GCTTGTTGTCACAACCTACC+AGG - chr8_1:79811273-79811292 Msa1217470:intron 50.0%
! GATGTCCGCGGATTTTCGTA+TGG - chr8_1:79811370-79811389 Msa1217470:intron 50.0%
CACAGCACCACTCAAAAGTC+CGG + chr8_1:79811731-79811750 None:intergenic 50.0%
GTAGATTCCTCTACCTCCTG+TGG - chr8_1:79811766-79811785 Msa1217470:intron 50.0%
TTCTCATCCACAGGAGGTAG+AGG + chr8_1:79811776-79811795 None:intergenic 50.0%
! GCGCACAATTGAGGCATCAA+TGG + chr8_1:79811840-79811859 None:intergenic 50.0%
TATGGAGTGCGTTGAGCAGT+TGG - chr8_1:79811901-79811920 Msa1217470:intron 50.0%
ATGGAGTGCGTTGAGCAGTT+GGG - chr8_1:79811902-79811921 Msa1217470:intron 50.0%
GCAGTTGGGTCGCATGTTTA+AGG - chr8_1:79811916-79811935 Msa1217470:intron 50.0%
CATTCTCCCCCCTCTTCAAG+AGG + chr8_1:79805012-79805031 None:intergenic 55.0%
GAACAAGCTTCCCTAGCGCT+CGG - chr8_1:79806008-79806027 Msa1217470:intron 55.0%
!! AGTGGGATATGGGAGGCACT+TGG - chr8_1:79807291-79807310 Msa1217470:CDS 55.0%
GGCCTAACACCAGTTCCTAC+TGG - chr8_1:79807567-79807586 Msa1217470:intron 55.0%
GAGAGTTTGCCCCGCTCTAT+TGG - chr8_1:79807699-79807718 Msa1217470:intron 55.0%
GAAACAGGATCCAAGCCACG+GGG + chr8_1:79808325-79808344 None:intergenic 55.0%
! TACCACTGAAGGCATGGCGT+TGG - chr8_1:79808499-79808518 Msa1217470:intron 55.0%
! TCAGGAAGAAGCTTGCTCGC+AGG - chr8_1:79810640-79810659 Msa1217470:intron 55.0%
!! CGGACTTTTGAGTGGTGCTG+TGG - chr8_1:79811729-79811748 Msa1217470:intron 55.0%
!! TGGTGAGGGTACCAATGAGC+TGG + chr8_1:79812331-79812350 None:intergenic 55.0%
TGGGGGAGGGGTTAACAGAT+GGG + chr8_1:79812403-79812422 None:intergenic 55.0%
TTGGGGGAGGGGTTAACAGA+TGG + chr8_1:79812404-79812423 None:intergenic 55.0%
GTCGTAGACACCGAGCGCTA+GGG + chr8_1:79806021-79806040 None:intergenic 60.0%
CACCAACGCCATGCCTTCAG+TGG + chr8_1:79808504-79808523 None:intergenic 60.0%
TCCAGTGCTGTGTACGTCCG+TGG - chr8_1:79809714-79809733 Msa1217470:intron 60.0%
TCCACGGACGTACACAGCAC+TGG + chr8_1:79809718-79809737 None:intergenic 60.0%
!! TTTTTGGGGGGGTTGGGGGA+GGG + chr8_1:79812416-79812435 None:intergenic 60.0%
!!! TTTTTTGGGGGGGTTGGGGG+AGG + chr8_1:79812417-79812436 None:intergenic 60.0%
CGTCGTAGACACCGAGCGCT+AGG + chr8_1:79806022-79806041 None:intergenic 65.0%
!! TTTTGGGGGGGTTGGGGGAG+GGG + chr8_1:79812415-79812434 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 79804018 79812597 79804018 ID=Msa1217470;Name=Msa1217470
chr8_1 mRNA 79804018 79812597 79804018 ID=Msa1217470-mRNA-1;Parent=Msa1217470;Name=Msa1217470-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0.83|0.76|0.92|0.83|0.84|13|456|478
chr8_1 exon 79804018 79804575 79804018 ID=Msa1217470-mRNA-1:exon:27910;Parent=Msa1217470-mRNA-1
chr8_1 exon 79804678 79804845 79804678 ID=Msa1217470-mRNA-1:exon:27909;Parent=Msa1217470-mRNA-1
chr8_1 exon 79804963 79805181 79804963 ID=Msa1217470-mRNA-1:exon:27908;Parent=Msa1217470-mRNA-1
chr8_1 exon 79805321 79805464 79805321 ID=Msa1217470-mRNA-1:exon:27907;Parent=Msa1217470-mRNA-1
chr8_1 exon 79805581 79805742 79805581 ID=Msa1217470-mRNA-1:exon:27906;Parent=Msa1217470-mRNA-1
chr8_1 exon 79805851 79805967 79805851 ID=Msa1217470-mRNA-1:exon:27905;Parent=Msa1217470-mRNA-1
chr8_1 exon 79807261 79807410 79807261 ID=Msa1217470-mRNA-1:exon:27904;Parent=Msa1217470-mRNA-1
chr8_1 exon 79807490 79807576 79807490 ID=Msa1217470-mRNA-1:exon:27903;Parent=Msa1217470-mRNA-1
chr8_1 exon 79807652 79807687 79807652 ID=Msa1217470-mRNA-1:exon:27902;Parent=Msa1217470-mRNA-1
chr8_1 exon 79808059 79808121 79808059 ID=Msa1217470-mRNA-1:exon:27901;Parent=Msa1217470-mRNA-1
chr8_1 exon 79808255 79808335 79808255 ID=Msa1217470-mRNA-1:exon:27900;Parent=Msa1217470-mRNA-1
chr8_1 exon 79808427 79808516 79808427 ID=Msa1217470-mRNA-1:exon:27899;Parent=Msa1217470-mRNA-1
chr8_1 exon 79812580 79812597 79812580 ID=Msa1217470-mRNA-1:exon:27898;Parent=Msa1217470-mRNA-1
chr8_1 CDS 79812580 79812597 79812580 ID=Msa1217470-mRNA-1:cds;Parent=Msa1217470-mRNA-1
chr8_1 CDS 79808427 79808516 79808427 ID=Msa1217470-mRNA-1:cds;Parent=Msa1217470-mRNA-1
chr8_1 CDS 79808255 79808335 79808255 ID=Msa1217470-mRNA-1:cds;Parent=Msa1217470-mRNA-1
chr8_1 CDS 79808059 79808121 79808059 ID=Msa1217470-mRNA-1:cds;Parent=Msa1217470-mRNA-1
chr8_1 CDS 79807652 79807687 79807652 ID=Msa1217470-mRNA-1:cds;Parent=Msa1217470-mRNA-1
chr8_1 CDS 79807490 79807576 79807490 ID=Msa1217470-mRNA-1:cds;Parent=Msa1217470-mRNA-1
chr8_1 CDS 79807261 79807410 79807261 ID=Msa1217470-mRNA-1:cds;Parent=Msa1217470-mRNA-1
chr8_1 CDS 79805851 79805967 79805851 ID=Msa1217470-mRNA-1:cds;Parent=Msa1217470-mRNA-1
chr8_1 CDS 79805581 79805742 79805581 ID=Msa1217470-mRNA-1:cds;Parent=Msa1217470-mRNA-1
chr8_1 CDS 79805321 79805464 79805321 ID=Msa1217470-mRNA-1:cds;Parent=Msa1217470-mRNA-1
chr8_1 CDS 79804963 79805181 79804963 ID=Msa1217470-mRNA-1:cds;Parent=Msa1217470-mRNA-1
chr8_1 CDS 79804678 79804845 79804678 ID=Msa1217470-mRNA-1:cds;Parent=Msa1217470-mRNA-1
chr8_1 CDS 79804474 79804575 79804474 ID=Msa1217470-mRNA-1:cds;Parent=Msa1217470-mRNA-1
chr8_1 three_prime_UTR 79804018 79804473 79804018 ID=Msa1217470-mRNA-1:three_prime_utr;Parent=Msa1217470-mRNA-1
Gene Sequence

>Msa1217470

ATGCCTCTTTGTTTGTTGAAAGTTCAAAATGAGCTGTTGTCTGTATATGCAAGTCAGCTCCTTGAGAAAGAGCACTCGGGATGTCATGCTTTACTTAGAGATGATAAGTGTGAAGACTTGTCAAGGATGTTCAGGCTATTTTCTAAAATACCCCGTGGCTTGGATCCTGTTTCTAGTATATTTAAGCAGCATGTTACCACTGAAGGCATGGCGTTGGTGAAGCATGCTGAAGATGCAGCTAGTAACAAAAAGGCAGAGAAAAGGGATATTGTTGGTACGCAGGAGCAGGTTTTTGTCCGGAAAGTGATTGAGCTACATGACAAGTACCTGGCATATGTGAACTCCTGTTTCCAGAATCACACTCTTTTCCACAAGGCTCTTAAAGAGGCTTTTGAGGTCTTTTGCAACAAAGGTGTTGCTGGAAACTCTAGTGCAGAACTTCTTGCCACTTTTTGTGATAACATTCTTAAGAAAGGAGGAAGTGAAAAATTGAGTGATGAAGCAATTGAAGAAACCCTTGAAAAGAAGCTTGCTCGCAGGCTTCTTTTTGACAAGAGTGCTAATGATGATCACGAGAGAAGTATTTTGACAAAATTGAAGCAACAGTGTGGTGGACAGTTTACCTCAAAGATGGAAGGAATGGTTACAGATTTGACGCTGGCAAAGGAGAATCAAACTAGCTTTGAGGAGTATTTAAGCAATACTCCTAATGCCGACCCTGGAATAGACTTAACAGTTACAGTTCTGACCACTGGTTTCTGGCCTAGTTATAAATCTTTTGATCTCAATCTTCCTGCAGAAATGGTTAAATGCGTTGAAGTTTTCAAAGAATTTTATTCAACTAAAACAAAGCACAGAAAACTTACATGGATTTACTCCTTGGGTACCTGTAACATAAGTGGGAAGTTTGACCCAAAAACAGTGGAGCTTGTTGTCACAACCTACCAGGCTTCAGCATTGTTGCTTTTTAATTCCTCTGATAGACTGAGTTATTCTGAGATAATGACTCAGTTAAACTTATTGGATGAAGATGTCATTAGGCTACTCCACTCTTTGTCATGTGCAAAGTATAAGATTCTTATCAAGGAGCCAAACACAAAAACGATATCACCCACTGATTATTTTGAATTTAATGCAAAGTTCACTGACAAAATGAGGAGGATCAAGATTCCTCTACCTCCTGTGGATGAGAAGAAAAAAGTAATTGAGGATGTTGACAAAGACAGAAGATATGCCATTGATGCCTCAATTGTGCGCATTATGAAGAGTCGGAAAGTTTTGGGCTATCAACAGTTAGTTATGGAGTGCGTTGAGCAGTTGGGTCGCATGTTTAAGCCTGATGTCAAAGCAATTAAAAAGCGGATTGAAGATTTGATTTCTCGGGATTACTTGGAAAGAGACAAAGAGAATCCAAATATGTTCAAGTACTTAGCTTGA

Protein sequence

>Msa1217470

MPLCLLKVQNELLSVYASQLLEKEHSGCHALLRDDKCEDLSRMFRLFSKIPRGLDPVSSIFKQHVTTEGMALVKHAEDAASNKKAEKRDIVGTQEQVFVRKVIELHDKYLAYVNSCFQNHTLFHKALKEAFEVFCNKGVAGNSSAELLATFCDNILKKGGSEKLSDEAIEETLEKKLARRLLFDKSANDDHERSILTKLKQQCGGQFTSKMEGMVTDLTLAKENQTSFEEYLSNTPNADPGIDLTVTVLTTGFWPSYKSFDLNLPAEMVKCVEVFKEFYSTKTKHRKLTWIYSLGTCNISGKFDPKTVELVVTTYQASALLLFNSSDRLSYSEIMTQLNLLDEDVIRLLHSLSCAKYKILIKEPNTKTISPTDYFEFNAKFTDKMRRIKIPLPPVDEKKKVIEDVDKDRRYAIDASIVRIMKSRKVLGYQQLVMECVEQLGRMFKPDVKAIKKRIEDLISRDYLERDKENPNMFKYLA*